FFCP PHASE1:Hg19::chr16:24267473..24267476,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10368 | |EntrezGene=10368 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=1407 | |HGNC=1407 | ||
|TSSclassifier=strong | |||
|UniProt=B3KP08 | |UniProt=B3KP08 | ||
|association_with_transcript=0bp_to_AK055453_5end | |association_with_transcript=0bp_to_AK055453_5end | ||
|cluster_id=chr16:24267473..24267476,+ | |||
|description=CAGE_peak_10_at_CACNG3_5end | |description=CAGE_peak_10_at_CACNG3_5end | ||
|id=chr16:24267473..24267476,+ | |id=chr16:24267473..24267476,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.02e-82!57;UBERON:0005068!6.02e-82!57;UBERON:0006241!6.02e-82!57;UBERON:0007135!6.02e-82!57;UBERON:0002619!1.15e-79!22;UBERON:0002020!2.17e-73!34;UBERON:0003528!2.17e-73!34;UBERON:0001869!9.82e-72!32;UBERON:0001950!2.35e-70!20;UBERON:0000956!6.33e-70!25;UBERON:0000203!6.33e-70!25;UBERON:0001893!2.52e-67!34;UBERON:0001017!1.16e-65!82;UBERON:0002616!1.98e-64!59;UBERON:0002791!2.72e-63!33;UBERON:0005743!2.42e-62!86;UBERON:0000955!3.69e-61!69;UBERON:0006238!3.69e-61!69;UBERON:0002780!3.22e-60!41;UBERON:0001890!3.22e-60!41;UBERON:0006240!3.22e-60!41;UBERON:0003080!1.09e-58!42;UBERON:0002346!8.00e-57!90;UBERON:0003075!6.19e-56!86;UBERON:0007284!6.19e-56!86;UBERON:0000073!7.15e-56!94;UBERON:0001016!7.15e-56!94;UBERON:0003056!5.68e-39!61;UBERON:0007023!9.72e-38!115;UBERON:0000033!4.61e-34!123;UBERON:0000153!3.56e-32!129;UBERON:0007811!3.56e-32!129;UBERON:0000924!2.04e-29!173;UBERON:0006601!2.04e-29!173;UBERON:0000200!6.96e-29!6;UBERON:0001871!2.61e-28!7;UBERON:0004121!2.97e-28!169;UBERON:0000349!3.91e-24!5;UBERON:0003076!3.10e-23!15;UBERON:0003057!3.10e-23!15;UBERON:0000025!2.32e-19!194;UBERON:0002021!6.66e-16!5;UBERON:0001872!8.37e-16!5;UBERON:0002771!3.40e-15!3;UBERON:0002240!6.63e-15!3;UBERON:0000988!2.35e-14!3;UBERON:0004111!3.29e-14!241;UBERON:0002298!6.80e-14!8;UBERON:0004733!4.94e-13!12;UBERON:0002028!4.94e-13!12;UBERON:0007277!4.94e-13!12;UBERON:0004732!5.47e-12!13;UBERON:0000477!7.73e-12!286;UBERON:0000064!1.25e-11!219;UBERON:0001954!4.43e-11!2;UBERON:0003022!4.43e-11!2;UBERON:0002421!4.43e-11!2;UBERON:0002600!4.43e-11!2;UBERON:0001870!6.88e-11!2;UBERON:0001876!1.06e-10!2;UBERON:0000483!1.90e-10!309;UBERON:0002148!2.08e-10!2;UBERON:0009662!2.08e-10!2;UBERON:0000119!2.81e-10!312;UBERON:0000475!3.48e-09!365;UBERON:0005174!3.92e-09!5;UBERON:0001137!3.92e-09!5;UBERON:0002420!2.02e-08!9;UBERON:0007245!2.02e-08!9;UBERON:0010009!2.02e-08!9;UBERON:0010011!2.02e-08!9;UBERON:0000454!2.02e-08!9;UBERON:0002680!2.41e-08!9;UBERON:0001895!2.41e-08!9;UBERON:0010092!2.41e-08!9;UBERON:0002308!2.66e-08!9;UBERON:0000125!2.66e-08!9;UBERON:0006331!3.28e-07!3;UBERON:0001896!9.30e-07!3;UBERON:0005290!9.30e-07!3;UBERON:0010096!9.30e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!6.02e-82!57;UBERON:0005068!6.02e-82!57;UBERON:0006241!6.02e-82!57;UBERON:0007135!6.02e-82!57;UBERON:0002619!1.15e-79!22;UBERON:0002020!2.17e-73!34;UBERON:0003528!2.17e-73!34;UBERON:0001869!9.82e-72!32;UBERON:0001950!2.35e-70!20;UBERON:0000956!6.33e-70!25;UBERON:0000203!6.33e-70!25;UBERON:0001893!2.52e-67!34;UBERON:0001017!1.16e-65!82;UBERON:0002616!1.98e-64!59;UBERON:0002791!2.72e-63!33;UBERON:0005743!2.42e-62!86;UBERON:0000955!3.69e-61!69;UBERON:0006238!3.69e-61!69;UBERON:0002780!3.22e-60!41;UBERON:0001890!3.22e-60!41;UBERON:0006240!3.22e-60!41;UBERON:0003080!1.09e-58!42;UBERON:0002346!8.00e-57!90;UBERON:0003075!6.19e-56!86;UBERON:0007284!6.19e-56!86;UBERON:0000073!7.15e-56!94;UBERON:0001016!7.15e-56!94;UBERON:0003056!5.68e-39!61;UBERON:0007023!9.72e-38!115;UBERON:0000033!4.61e-34!123;UBERON:0000153!3.56e-32!129;UBERON:0007811!3.56e-32!129;UBERON:0000924!2.04e-29!173;UBERON:0006601!2.04e-29!173;UBERON:0000200!6.96e-29!6;UBERON:0001871!2.61e-28!7;UBERON:0004121!2.97e-28!169;UBERON:0000349!3.91e-24!5;UBERON:0003076!3.10e-23!15;UBERON:0003057!3.10e-23!15;UBERON:0000025!2.32e-19!194;UBERON:0002021!6.66e-16!5;UBERON:0001872!8.37e-16!5;UBERON:0002771!3.40e-15!3;UBERON:0002240!6.63e-15!3;UBERON:0000988!2.35e-14!3;UBERON:0004111!3.29e-14!241;UBERON:0002298!6.80e-14!8;UBERON:0004733!4.94e-13!12;UBERON:0002028!4.94e-13!12;UBERON:0007277!4.94e-13!12;UBERON:0004732!5.47e-12!13;UBERON:0000477!7.73e-12!286;UBERON:0000064!1.25e-11!219;UBERON:0001954!4.43e-11!2;UBERON:0003022!4.43e-11!2;UBERON:0002421!4.43e-11!2;UBERON:0002600!4.43e-11!2;UBERON:0001870!6.88e-11!2;UBERON:0001876!1.06e-10!2;UBERON:0000483!1.90e-10!309;UBERON:0002148!2.08e-10!2;UBERON:0009662!2.08e-10!2;UBERON:0000119!2.81e-10!312;UBERON:0000475!3.48e-09!365;UBERON:0005174!3.92e-09!5;UBERON:0001137!3.92e-09!5;UBERON:0002420!2.02e-08!9;UBERON:0007245!2.02e-08!9;UBERON:0010009!2.02e-08!9;UBERON:0010011!2.02e-08!9;UBERON:0000454!2.02e-08!9;UBERON:0002680!2.41e-08!9;UBERON:0001895!2.41e-08!9;UBERON:0010092!2.41e-08!9;UBERON:0002308!2.66e-08!9;UBERON:0000125!2.66e-08!9;UBERON:0006331!3.28e-07!3;UBERON:0001896!9.30e-07!3;UBERON:0005290!9.30e-07!3;UBERON:0010096!9.30e-07!3 | ||
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|short_description=p10@CACNG3 | |short_description=p10@CACNG3 | ||
}} | }} |
Latest revision as of 07:17, 25 September 2015
Short description: | p10@CACNG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CACNG3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK055453_5end |
EntrezGene: | CACNG3 |
HGNC: | 1407 |
UniProt: | B3KP08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.71e-40 | 5 |
Ammon's horn | 9.18e-26 | 2 |
lobe parts of cerebral cortex | 9.18e-26 | 2 |
hippocampal formation | 9.18e-26 | 2 |
limbic lobe | 9.18e-26 | 2 |
regional part of cerebral cortex | 3.62e-20 | 22 |
cerebral cortex | 5.83e-18 | 25 |
pallium | 5.83e-18 | 25 |
regional part of telencephalon | 2.31e-14 | 32 |
cerebral hemisphere | 2.31e-14 | 32 |
brain grey matter | 1.35e-13 | 34 |
gray matter | 1.35e-13 | 34 |
telencephalon | 1.35e-13 | 34 |
regional part of forebrain | 1.73e-11 | 41 |
forebrain | 1.73e-11 | 41 |
anterior neural tube | 1.73e-11 | 41 |
future forebrain | 1.73e-11 | 41 |
limbic system | 3.60e-11 | 5 |
neocortex | 1.69e-10 | 20 |
neurectoderm | 5.98e-10 | 86 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |
pre-chordal neural plate | 4.61e-08 | 61 |
brain | 3.10e-07 | 68 |
future brain | 3.10e-07 | 68 |