Personal tools

FFCP PHASE1:Mm9::chr16:48772165..48772182,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr16:48772165..48772182,-
|DHSsupport=NA
|short_description=p1@Trat1
|DPIdataset=NA
|description=CAGE_peak_1_at_Trat1_5end
|association_with_transcript=68bp_to_ENSMUST00000071647,ENSMUST00000099715_5end
|EntrezGene=77647
|EntrezGene=77647
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=Q3UU67
|UniProt=Q3UU67
|association_with_transcript=68bp_to_ENSMUST00000071647,ENSMUST00000099715_5end
|cluster_id=chr16:48772165..48772182,-
|description=CAGE_peak_1_at_Trat1_5end
|id=chr16:48772165..48772182,-
|ontology_enrichment_celltype=CL:0000838!6.40e-13!12;CL:0000084!2.06e-12!11;CL:0000827!2.06e-12!11;CL:0000542!1.34e-11!13;CL:0000051!1.34e-11!13;CL:0002031!1.26e-10!25;CL:0000791!1.36e-10!9;CL:0000789!1.36e-10!9;CL:0002420!1.36e-10!9;CL:0002419!1.36e-10!9;CL:0000790!1.36e-10!9;CL:0000624!1.15e-09!8;CL:0000988!1.15e-08!32;CL:0002032!1.15e-08!32;CL:0000037!1.15e-08!32;CL:0000566!1.15e-08!32;CL:0000837!1.15e-08!32;CL:0000738!6.47e-08!17;CL:0002087!6.47e-08!17;CL:0000893!1.28e-07!6;CL:0002489!1.28e-07!6;CL:0000898!1.28e-07!6;CL:0000809!1.28e-07!6;CL:0000810!1.28e-07!6;CL:0000895!1.28e-07!6;CL:0000808!1.28e-07!6;CL:0000894!1.28e-07!6;CL:0000806!1.28e-07!6;CL:0000807!1.28e-07!6;CL:0000805!1.28e-07!6;CL:0002425!1.28e-07!6;CL:0002436!1.28e-07!6;CL:0002427!1.28e-07!6;CL:0002428!1.28e-07!6;CL:0002429!1.28e-07!6;CL:0002433!1.28e-07!6;CL:0002431!1.28e-07!6;CL:0002432!1.28e-07!6
|ontology_enrichment_celltype_v019_2=CL:0000084,5.69e-25,11;CL:0000827,5.69e-25,11;CL:0000838,1.09e-22,12;CL:0000791,4.92e-21,9;CL:0000789,4.92e-21,9;CL:0002420,4.92e-21,9;CL:0002419,4.92e-21,9;CL:0000790,4.92e-21,9;CL:0000542,9.36e-21,13;CL:0000051,9.36e-21,13;CL:0000624,4.94e-19,8;CL:0000738,2.66e-15,17;CL:0002087,2.66e-15,17;CL:0000893,1.26e-14,6;CL:0002489,1.26e-14,6;CL:0000898,1.26e-14,6;CL:0000809,1.26e-14,6;CL:0000810,1.26e-14,6;CL:0000895,1.26e-14,6;CL:0000808,1.26e-14,6;CL:0000894,1.26e-14,6;CL:0000806,1.26e-14,6;CL:0000807,1.26e-14,6;CL:0000805,1.26e-14,6;CL:0002425,1.26e-14,6;CL:0002436,1.26e-14,6;CL:0002427,1.26e-14,6;CL:0002428,1.26e-14,6;CL:0002429,1.26e-14,6;CL:0002433,1.26e-14,6;CL:0002431,1.26e-14,6;CL:0002432,1.26e-14,6;CL:0002031,1.58e-13,25;CL:0000988,6.23e-10,32;CL:0002032,6.23e-10,32;CL:0000037,6.23e-10,32;CL:0000837,6.23e-10,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.56e-19!29;UBERON:0002370!2.55e-18!23;UBERON:0000974!2.55e-18!23;UBERON:0004807!2.55e-18!23;UBERON:0005058!2.55e-18!23;UBERON:0003351!2.55e-18!23;UBERON:0009113!2.55e-18!23;UBERON:0003295!2.55e-18!23;UBERON:0009722!2.55e-18!23;UBERON:0005562!2.55e-18!23;UBERON:0007690!2.55e-18!23;UBERON:0006562!3.20e-17!24;UBERON:0003408!3.20e-17!24;UBERON:0001557!3.20e-17!24;UBERON:0001042!3.20e-17!24;UBERON:0008814!3.20e-17!24;UBERON:0009145!3.20e-17!24;UBERON:0002193!3.91e-17!48;UBERON:0002390!2.78e-16!45;UBERON:0003061!2.78e-16!45;UBERON:0000065!8.48e-15!41;UBERON:0000072!1.96e-14!27;UBERON:0001004!3.30e-14!42;UBERON:0003081!7.11e-11!88;UBERON:0000063!1.34e-10!35;UBERON:0002405!7.34e-10!70;UBERON:0005057!4.77e-09!51
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.05e-37,29;UBERON:0005057,4.05e-37,29;UBERON:0002370,2.71e-36,23;UBERON:0000974,2.71e-36,23;UBERON:0004807,2.71e-36,23;UBERON:0005058,2.71e-36,23;UBERON:0003351,2.71e-36,23;UBERON:0009113,2.71e-36,23;UBERON:0003295,2.71e-36,23;UBERON:0009722,2.71e-36,23;UBERON:0005562,2.71e-36,23;UBERON:0007690,2.71e-36,23;UBERON:0006562,1.40e-34,24;UBERON:0003408,1.40e-34,24;UBERON:0001557,1.40e-34,24;UBERON:0001042,1.40e-34,24;UBERON:0008814,1.40e-34,24;UBERON:0009145,1.40e-34,24;UBERON:0000072,3.36e-30,27;UBERON:0000077,8.11e-30,35;UBERON:0002193,8.55e-27,48;UBERON:0002405,8.55e-27,48;UBERON:0002390,1.90e-26,45;UBERON:0003061,1.90e-26,45;UBERON:0007811,1.91e-21,36;UBERON:0000065,2.87e-20,41;UBERON:0001004,1.15e-19,42;UBERON:0000153,3.54e-17,43;UBERON:0003929,2.11e-12,55;UBERON:0003081,5.74e-12,87;UBERON:0001041,3.98e-11,80;UBERON:0002368,5.55e-11,60;UBERON:0005911,4.74e-10,69;UBERON:0002530,8.74e-10,65;UBERON:0000490,1.44e-09,66;UBERON:0004921,1.97e-09,114;UBERON:0000949,2.08e-09,72;UBERON:0001007,3.66e-09,116;UBERON:0001555,3.66e-09,116;UBERON:0007026,3.66e-09,116;UBERON:0004119,6.65e-09,118;UBERON:0000925,6.65e-09,118;UBERON:0006595,6.65e-09,118;UBERON:0000926,4.39e-07,120;UBERON:0004120,4.39e-07,120;UBERON:0006603,4.39e-07,120
|phase1_expression=0,0,0,0,0,0,0,31.376967596303,8.869689495555,6.78787126333781,7.70480857014772,8.93448180747768,51.7026204392241,44.4969848312697,0.666219523631325,0.404950534779652,0.699561878128147,2.20823515750766,1.7824876368746,0.42438965179803,1.27564935226605,4.17021995043718,3.13439746966722,0.319984845586813,0,0,0,0,0.950117097281869,1.00812051903972,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,18.1340535502836,6.72187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.37020655662872,9.58070169494535,0.148442139064825,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,1.02182822083437,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,1.05088808130453,0,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0,0,1.98251269790279,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0,0,0.739012760666419,0,0,0,0,1.67506257441816,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0.98931751764888,0,0.361877549568935,0.238744688006273,0.656563598980245,0,0,1.36696704638282,0,0,0.565105371014073,1.50363650493128,2.0590035588587,0.169978429993855,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,50.8777904211367,0.608175645870493,3.3894615864393,12.7322406518239,15.3962958274034,34.7692370867214,31.1306214256719,32.0486273968833,42.9107412279627,43.6665002133149,41.4395620912415,43.4662148099296,42.2369984801046,73.6324483743884,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0.282328141245992,0.169229215783353,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0
|phase1_expression=0,0,0,0,0,0,0,31.376967596303,8.869689495555,6.78787126333781,7.70480857014772,8.93448180747768,51.7026204392241,44.4969848312697,0.666219523631325,0.404950534779652,0.699561878128147,2.20823515750766,1.7824876368746,0.42438965179803,1.27564935226605,4.17021995043718,3.13439746966722,0.319984845586813,0,0,0,0,0.950117097281869,1.00812051903972,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,18.1340535502836,6.72187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.37020655662872,9.58070169494535,0.148442139064825,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,1.02182822083437,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,1.05088808130453,0,0.32833492815819,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0,0,1.98251269790279,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0,0,0.739012760666419,0,0,0,0,1.67506257441816,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0.98931751764888,0,0.361877549568935,0.238744688006273,0.656563598980245,0,0,1.36696704638282,0,0,0.565105371014073,1.50363650493128,2.0590035588587,0.169978429993855,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,50.8777904211367,0.608175645870493,3.3894615864393,12.7322406518239,15.3962958274034,34.7692370867214,31.1306214256719,32.0486273968833,42.9107412279627,43.6665002133149,41.4395620912415,43.4662148099296,42.2369984801046,73.6324483743884,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0.282328141245992,0.169229215783353,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0.220591419119515,0
|short_description=p1@Trat1
}}
}}

Latest revision as of 14:53, 25 September 2015

Short description:p1@Trat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trat1_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 68bp_to_ENSMUST00000071647, ENSMUST00000099715_5end
EntrezGene:Trat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E931.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E451.70
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E844.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I918.13
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H99.58
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B550.88
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I23.39
thymus, embryo E16.CNhs11002.456-26C512.73
thymus, embryo E17.CNhs10581.478-18C115.40
thymus, embryo E18.CNhs10595.1273-19G434.77
thymus, neonate N02.CNhs11181.1541-43F831.13
thymus, neonate N03.CNhs11137.2104-43C732.05
thymus, neonate N06.CNhs11197.681-26C442.91
thymus, neonate N07.CNhs11211.713-19D343.67
thymus, neonate N10.CNhs11194.748-24E441.44
thymus, neonate N20.CNhs11186.820-7A243.47
thymus, neonate N25.CNhs11125.1362-25G742.24
thymus, neonate N30.CNhs11132.1393-42G273.63
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell5.69e-2511
pro-T cell5.69e-2511
lymphoid lineage restricted progenitor cell1.09e-2212
mature alpha-beta T cell4.92e-219
alpha-beta T cell4.92e-219
immature T cell4.92e-219
mature T cell4.92e-219
immature alpha-beta T cell4.92e-219
lymphocyte9.36e-2113
common lymphoid progenitor9.36e-2113
CD4-positive, alpha-beta T cell4.94e-198
leukocyte2.66e-1517
nongranular leukocyte2.66e-1517
thymocyte1.26e-146
double negative thymocyte1.26e-146
naive T cell1.26e-146
double-positive, alpha-beta thymocyte1.26e-146
CD4-positive, alpha-beta thymocyte1.26e-146
naive thymus-derived CD4-positive, alpha-beta T cell1.26e-146
DN4 thymocyte1.26e-146
DN1 thymic pro-T cell1.26e-146
DN2 thymocyte1.26e-146
DN3 thymocyte1.26e-146
immature single positive thymocyte1.26e-146
early T lineage precursor1.26e-146
mature CD4 single-positive thymocyte1.26e-146
resting double-positive thymocyte1.26e-146
double-positive blast1.26e-146
CD69-positive double-positive thymocyte1.26e-146
CD69-positive, CD4-positive single-positive thymocyte1.26e-146
CD4-positive, CD8-intermediate double-positive thymocyte1.26e-146
CD24-positive, CD4 single-positive thymocyte1.26e-146
hematopoietic lineage restricted progenitor cell1.58e-1325
hematopoietic cell6.23e-1032
hematopoietic oligopotent progenitor cell6.23e-1032
hematopoietic stem cell6.23e-1032
hematopoietic multipotent progenitor cell6.23e-1032

Uber anatomy
Ontology termp-valuen
hemopoietic organ4.05e-3729
immune organ4.05e-3729
thymus2.71e-3623
neck2.71e-3623
respiratory system epithelium2.71e-3623
hemolymphoid system gland2.71e-3623
pharyngeal epithelium2.71e-3623
thymic region2.71e-3623
pharyngeal gland2.71e-3623
entire pharyngeal arch endoderm2.71e-3623
thymus primordium2.71e-3623
early pharyngeal endoderm2.71e-3623
pharynx1.40e-3424
gland of gut1.40e-3424
upper respiratory tract1.40e-3424
chordate pharynx1.40e-3424
pharyngeal arch system1.40e-3424
pharyngeal region of foregut1.40e-3424
segment of respiratory tract3.36e-3027
mixed endoderm/mesoderm-derived structure8.11e-3035
hemolymphoid system8.55e-2748
immune system8.55e-2748
hematopoietic system1.90e-2645
blood island1.90e-2645
craniocervical region1.91e-2136
respiratory tract2.87e-2041
respiratory system1.15e-1942
anterior region of body3.54e-1743
gut epithelium2.11e-1255
lateral plate mesoderm5.74e-1287
foregut3.98e-1180
endocrine gland5.55e-1160
endo-epithelium4.74e-1069
gland8.74e-1065
unilaminar epithelium1.44e-0966
subdivision of digestive tract1.97e-09114
endocrine system2.08e-0972
digestive system3.66e-09116
digestive tract3.66e-09116
primitive gut3.66e-09116
endoderm-derived structure6.65e-09118
endoderm6.65e-09118
presumptive endoderm6.65e-09118
mesoderm4.39e-07120
mesoderm-derived structure4.39e-07120
presumptive mesoderm4.39e-07120
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:48772165..48772182,-&oldid=4197658"