FFCP PHASE1:Mm9::chr7:109415808..109415863,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20866 | |EntrezGene=20866 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=P70302 | |UniProt=P70302 | ||
|association_with_transcript=-474bp_to_ENSMUST00000033289,NM_009287,uc009irl.1,uc009irm.1_5end | |association_with_transcript=-474bp_to_ENSMUST00000033289,NM_009287,uc009irl.1,uc009irm.1_5end | ||
|cluster_id=chr7:109415808..109415863,+ | |||
|description=CAGE_peak_2_at_Stim1_5end | |description=CAGE_peak_2_at_Stim1_5end | ||
|id=chr7:109415808..109415863,+ | |id=chr7:109415808..109415863,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!9.86e-14!86;UBERON:0000033!2.10e-13!63;UBERON:0000153!2.29e-12!94;UBERON:0001049!7.16e-12!52;UBERON:0005068!7.16e-12!52;UBERON:0006241!7.16e-12!52;UBERON:0007135!7.16e-12!52;UBERON:0000955!5.06e-11!50;UBERON:0006238!5.06e-11!50;UBERON:0001017!5.77e-11!73;UBERON:0005743!5.77e-11!73;UBERON:0002616!1.70e-10!49;UBERON:0004121!6.32e-10!102;UBERON:0000924!6.32e-10!102;UBERON:0006601!6.32e-10!102;UBERON:0000073!7.63e-10!75;UBERON:0001016!7.63e-10!75;UBERON:0002346!1.12e-09!71;UBERON:0003075!1.12e-09!71;UBERON:0007284!1.12e-09!71;UBERON:0003056!2.60e-09!49;UBERON:0002020!2.14e-08!34;UBERON:0003080!1.13e-07!40;UBERON:0002780!3.50e-07!39;UBERON:0001890!3.50e-07!39;UBERON:0006240!3.50e-07!39 | |ontology_enrichment_uberon=UBERON:0007811!9.86e-14!86;UBERON:0000033!2.10e-13!63;UBERON:0000153!2.29e-12!94;UBERON:0001049!7.16e-12!52;UBERON:0005068!7.16e-12!52;UBERON:0006241!7.16e-12!52;UBERON:0007135!7.16e-12!52;UBERON:0000955!5.06e-11!50;UBERON:0006238!5.06e-11!50;UBERON:0001017!5.77e-11!73;UBERON:0005743!5.77e-11!73;UBERON:0002616!1.70e-10!49;UBERON:0004121!6.32e-10!102;UBERON:0000924!6.32e-10!102;UBERON:0006601!6.32e-10!102;UBERON:0000073!7.63e-10!75;UBERON:0001016!7.63e-10!75;UBERON:0002346!1.12e-09!71;UBERON:0003075!1.12e-09!71;UBERON:0007284!1.12e-09!71;UBERON:0003056!2.60e-09!49;UBERON:0002020!2.14e-08!34;UBERON:0003080!1.13e-07!40;UBERON:0002780!3.50e-07!39;UBERON:0001890!3.50e-07!39;UBERON:0006240!3.50e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.05e-12,54;UBERON:0002346,1.41e-12,64;UBERON:0003075,1.41e-12,64;UBERON:0007284,1.41e-12,64;UBERON:0004121,3.75e-12,95;UBERON:0000924,3.75e-12,95;UBERON:0006601,3.75e-12,95;UBERON:0001049,4.96e-12,52;UBERON:0005068,4.96e-12,52;UBERON:0006241,4.96e-12,52;UBERON:0007135,4.96e-12,52;UBERON:0010371,5.08e-12,73;UBERON:0001017,5.81e-11,73;UBERON:0000955,4.09e-10,47;UBERON:0006238,4.09e-10,47;UBERON:0001016,7.08e-10,75;UBERON:0002616,1.34e-09,46;UBERON:0003056,1.91e-09,49;UBERON:0002020,1.55e-08,34;UBERON:0003080,8.49e-08,40;UBERON:0002780,2.66e-07,39;UBERON:0001890,2.66e-07,39;UBERON:0006240,2.66e-07,39 | |||
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| ||
|short_description=p2@Stim1 | |short_description=p2@Stim1 | ||
}} | }} |
Latest revision as of 16:01, 25 September 2015
Short description: | p2@Stim1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Stim1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -474bp_to_ENSMUST00000033289, NM_009287, uc009irl.1, uc009irm.1_5end |
EntrezGene: | Stim1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.05e-12 | 54 |
neurectoderm | 1.41e-12 | 64 |
neural plate | 1.41e-12 | 64 |
presumptive neural plate | 1.41e-12 | 64 |
ectoderm-derived structure | 3.75e-12 | 95 |
ectoderm | 3.75e-12 | 95 |
presumptive ectoderm | 3.75e-12 | 95 |
neural tube | 4.96e-12 | 52 |
neural rod | 4.96e-12 | 52 |
future spinal cord | 4.96e-12 | 52 |
neural keel | 4.96e-12 | 52 |
ecto-epithelium | 5.08e-12 | 73 |
central nervous system | 5.81e-11 | 73 |
brain | 4.09e-10 | 47 |
future brain | 4.09e-10 | 47 |
nervous system | 7.08e-10 | 75 |
regional part of brain | 1.34e-09 | 46 |
pre-chordal neural plate | 1.91e-09 | 49 |
gray matter | 1.55e-08 | 34 |
anterior neural tube | 8.49e-08 | 40 |
regional part of forebrain | 2.66e-07 | 39 |
forebrain | 2.66e-07 | 39 |
future forebrain | 2.66e-07 | 39 |