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FFCP PHASE1:Mm9::chr19:4510498..4510508,+: Difference between revisions

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{{FFCP|EntrezGene=18563|HGNC=|UniProt=E9PW11|association_with_transcript=-13bp_to_ENSMUST00000163318_5end|description=CAGE_peak_7_at_Pcx_5end|id=chr19:4510498..4510508,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.45e-12!71;UBERON:0003075!1.45e-12!71;UBERON:0007284!1.45e-12!71;UBERON:0000955!5.35e-11!50;UBERON:0006238!5.35e-11!50;UBERON:0002616!5.68e-11!49;UBERON:0000033!8.58e-11!63;UBERON:0001049!1.87e-10!52;UBERON:0005068!1.87e-10!52;UBERON:0006241!1.87e-10!52;UBERON:0007135!1.87e-10!52;UBERON:0004121!4.73e-10!102;UBERON:0000924!4.73e-10!102;UBERON:0006601!4.73e-10!102;UBERON:0000025!7.29e-09!114;UBERON:0004111!9.92e-09!122;UBERON:0001017!2.13e-08!73;UBERON:0005743!2.13e-08!73;UBERON:0003056!2.40e-08!49;UBERON:0003080!5.31e-08!40;UBERON:0000073!1.20e-07!75;UBERON:0001016!1.20e-07!75;UBERON:0002780!1.79e-07!39;UBERON:0001890!1.79e-07!39;UBERON:0006240!1.79e-07!39;UBERON:0002791!2.38e-07!29;UBERON:0003528!2.38e-07!29;UBERON:0001893!2.38e-07!29;UBERON:0000956!8.04e-07!21;UBERON:0001869!8.04e-07!21;UBERON:0000203!8.04e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000955,4.17e-11,47;UBERON:0006238,4.17e-11,47;UBERON:0002616,4.41e-11,46;UBERON:0001049,2.84e-10,52;UBERON:0005068,2.84e-10,52;UBERON:0006241,2.84e-10,52;UBERON:0007135,2.84e-10,52;UBERON:0000073,3.96e-10,54;UBERON:0002346,9.21e-10,64;UBERON:0003075,9.21e-10,64;UBERON:0007284,9.21e-10,64;UBERON:0010371,3.92e-09,73;UBERON:0001017,2.53e-08,73;UBERON:0003080,4.04e-08,40;UBERON:0003056,4.35e-08,49;UBERON:0010314,8.04e-08,92;UBERON:0004121,9.57e-08,95;UBERON:0000924,9.57e-08,95;UBERON:0006601,9.57e-08,95;UBERON:0003528,1.19e-07,29;UBERON:0002791,1.19e-07,29;UBERON:0001893,1.19e-07,29;UBERON:0002780,1.44e-07,39;UBERON:0001890,1.44e-07,39;UBERON:0006240,1.44e-07,39;UBERON:0001016,1.56e-07,75;UBERON:0000025,1.67e-07,114;UBERON:0000956,3.67e-07,21;UBERON:0001869,3.67e-07,21;UBERON:0000203,3.67e-07,21;UBERON:0004111,4.76e-07,122|phase1_expression=0.960893082628764,1.04692622291808,1.36499771816861,1.20985684522732,1.50268718983904,0.671517087647559,0.467225281191051,0.258246646883153,0,0,0,0.0797721589953364,0.684802919724823,0.437102012094987,0.333109761815663,0.607425802169478,1.39912375625629,0,0.137114433605739,0,2.97651515528744,0.695036658406197,1.04479915655574,1.11994695955385,0.45881856213434,0,1.7230479846363,0.215471232685889,0.950117097281869,0.252030129759931,0,5.08024538767705,6.76571266343027,0,0.577703239502549,0.332469290716985,1.63335485009895,0.418531630736908,0,0,0,0,0,0.755380907853464,1.62203089951223,1.28482726513177,3.12956537739216,5.01457859675027,4.61340983742391,3.88859798148567,2.65974201088189,4.31257693094915,0.167782606057736,0,0.336093799142464,0,0.573066879877513,1.54701627683233,0.809265843438391,2.11596391708813,1.26766280701236,2.03306719241479,1.77858959222228,0.899899717281399,0.988866362566974,0.7104801149461,2.39680088414724,4.61061966385865,2.17748185847803,1.62007125998029,2.52389953621658,1.42825492201902,1.10434270475807,1.71487118900936,1.72521847832825,2.75765635983006,0,4.34136949489638,5.52983519722476,1.18697658957174,0.731901148819277,1.56274011167028,5.58365998002762,4.50210088025344,5.04234217663473,0.883885756421003,1.99320353118744,0.931997229126503,0.37863096666592,0.68014404096107,0.869593466105033,2.58127163094416,3.39985666853875,4.85732872474035,6.49776417447669,5.82434953226536,2.66844398250329,2.04516387093669,0.779358013808606,2.47337702157238,0.845060518660083,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,2.62622923353838,0,3.71105347662062,1.38788261412909,2.74018930480927,1.61430848079241,4.37095657602605,2.58695155698551,6.28332956648377,0.247194967734374,7.51916655983541,0.884610551949874,0.323533699894818,1.76673214768315,0.969750506270444,1.86391761218122,3.80615036115011,4.1889341362691,0.766371165625774,0.239630249011841,0,0.127070227073065,6.89036941262184,7.32000964509802,0.376963056338593,4.69325664519146,3.3243009452943,4.77912502486988,4.2182728397617,0.509196819251581,1.49288364732112,2.27450482590307,5.47148825304832,1.95180664444056,2.06911893990126,2.34080768746954,0.90422890701429,1.36072998302656,1.0249097622788,0.937017245597288,2.32833033665114,1.29340795759705,1.13463648100692,1.05570674498369,0.657587197282725,1.39023624612799,1.39300866608867,0.823128545631774,0.59710280045548,0.702213187313235,0.772043721344145,0.284163499395593,2.27838349789052,0.938104239924385,1.08037236876609,0.473489471170421,0.983821158737019,1.3884040159864,0.930135779001631,2.14618721119695,0.934122738937356,0.493679549740441,0.32833492815819,1.21603214318784,1.16959989940266,2.63460138349261,1.47627060636409,2.52347938276953,1.44066457330998,1.32167513193519,0.793351699990633,0.639864751605702,0.464473343720877,0.515469845288373,1.21010114774006,1.33426826306922,0.760902504450237,1.89811624617805,0,0,0.198956472041151,0.58489226135736,0,1.5129663491228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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18563
|HGNC=
|TSSclassifier=NA
|UniProt=E9PW11
|association_with_transcript=-13bp_to_ENSMUST00000163318_5end
|cluster_id=chr19:4510498..4510508,+
|description=CAGE_peak_7_at_Pcx_5end
|id=chr19:4510498..4510508,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.45e-12!71;UBERON:0003075!1.45e-12!71;UBERON:0007284!1.45e-12!71;UBERON:0000955!5.35e-11!50;UBERON:0006238!5.35e-11!50;UBERON:0002616!5.68e-11!49;UBERON:0000033!8.58e-11!63;UBERON:0001049!1.87e-10!52;UBERON:0005068!1.87e-10!52;UBERON:0006241!1.87e-10!52;UBERON:0007135!1.87e-10!52;UBERON:0004121!4.73e-10!102;UBERON:0000924!4.73e-10!102;UBERON:0006601!4.73e-10!102;UBERON:0000025!7.29e-09!114;UBERON:0004111!9.92e-09!122;UBERON:0001017!2.13e-08!73;UBERON:0005743!2.13e-08!73;UBERON:0003056!2.40e-08!49;UBERON:0003080!5.31e-08!40;UBERON:0000073!1.20e-07!75;UBERON:0001016!1.20e-07!75;UBERON:0002780!1.79e-07!39;UBERON:0001890!1.79e-07!39;UBERON:0006240!1.79e-07!39;UBERON:0002791!2.38e-07!29;UBERON:0003528!2.38e-07!29;UBERON:0001893!2.38e-07!29;UBERON:0000956!8.04e-07!21;UBERON:0001869!8.04e-07!21;UBERON:0000203!8.04e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000955,4.17e-11,47;UBERON:0006238,4.17e-11,47;UBERON:0002616,4.41e-11,46;UBERON:0001049,2.84e-10,52;UBERON:0005068,2.84e-10,52;UBERON:0006241,2.84e-10,52;UBERON:0007135,2.84e-10,52;UBERON:0000073,3.96e-10,54;UBERON:0002346,9.21e-10,64;UBERON:0003075,9.21e-10,64;UBERON:0007284,9.21e-10,64;UBERON:0010371,3.92e-09,73;UBERON:0001017,2.53e-08,73;UBERON:0003080,4.04e-08,40;UBERON:0003056,4.35e-08,49;UBERON:0010314,8.04e-08,92;UBERON:0004121,9.57e-08,95;UBERON:0000924,9.57e-08,95;UBERON:0006601,9.57e-08,95;UBERON:0003528,1.19e-07,29;UBERON:0002791,1.19e-07,29;UBERON:0001893,1.19e-07,29;UBERON:0002780,1.44e-07,39;UBERON:0001890,1.44e-07,39;UBERON:0006240,1.44e-07,39;UBERON:0001016,1.56e-07,75;UBERON:0000025,1.67e-07,114;UBERON:0000956,3.67e-07,21;UBERON:0001869,3.67e-07,21;UBERON:0000203,3.67e-07,21;UBERON:0004111,4.76e-07,122
|phase1_expression=0.960893082628764,1.04692622291808,1.36499771816861,1.20985684522732,1.50268718983904,0.671517087647559,0.467225281191051,0.258246646883153,0,0,0,0.0797721589953364,0.684802919724823,0.437102012094987,0.333109761815663,0.607425802169478,1.39912375625629,0,0.137114433605739,0,2.97651515528744,0.695036658406197,1.04479915655574,1.11994695955385,0.45881856213434,0,1.7230479846363,0.215471232685889,0.950117097281869,0.252030129759931,0,5.08024538767705,6.76571266343027,0,0.577703239502549,0.332469290716985,1.63335485009895,0.418531630736908,0,0,0,0,0,0.755380907853464,1.62203089951223,1.28482726513177,3.12956537739216,5.01457859675027,4.61340983742391,3.88859798148567,2.65974201088189,4.31257693094915,0.167782606057736,0,0.336093799142464,0,0.573066879877513,1.54701627683233,0.809265843438391,2.11596391708813,1.26766280701236,2.03306719241479,1.77858959222228,0.899899717281399,0.988866362566974,0.7104801149461,2.39680088414724,4.61061966385865,2.17748185847803,1.62007125998029,2.52389953621658,1.42825492201902,1.10434270475807,1.71487118900936,1.72521847832825,2.75765635983006,0,4.34136949489638,5.52983519722476,1.18697658957174,0.731901148819277,1.56274011167028,5.58365998002762,4.50210088025344,5.04234217663473,0.883885756421003,1.99320353118744,0.931997229126503,0.37863096666592,0.68014404096107,0.869593466105033,2.58127163094416,3.39985666853875,4.85732872474035,6.49776417447669,5.82434953226536,2.66844398250329,2.04516387093669,0.779358013808606,2.47337702157238,0.845060518660083,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,2.62622923353838,0,3.71105347662062,1.38788261412909,2.74018930480927,1.61430848079241,4.37095657602605,2.58695155698551,6.28332956648377,0.247194967734374,7.51916655983541,0.884610551949874,0.323533699894818,1.76673214768315,0.969750506270444,1.86391761218122,3.80615036115011,4.1889341362691,0.766371165625774,0.239630249011841,0,0.127070227073065,6.89036941262184,7.32000964509802,0.376963056338593,4.69325664519146,3.3243009452943,4.77912502486988,4.2182728397617,0.509196819251581,1.49288364732112,2.27450482590307,5.47148825304832,1.95180664444056,2.06911893990126,2.34080768746954,0.90422890701429,1.36072998302656,1.0249097622788,0.937017245597288,2.32833033665114,1.29340795759705,1.13463648100692,1.05570674498369,0.657587197282725,1.39023624612799,1.39300866608867,0.823128545631774,0.59710280045548,0.702213187313235,0.772043721344145,0.284163499395593,2.27838349789052,0.938104239924385,1.08037236876609,0.473489471170421,0.983821158737019,1.3884040159864,0.930135779001631,2.14618721119695,0.934122738937356,0.493679549740441,0.32833492815819,1.21603214318784,1.16959989940266,2.63460138349261,1.47627060636409,2.52347938276953,1.44066457330998,1.32167513193519,0.793351699990633,0.639864751605702,0.464473343720877,0.515469845288373,1.21010114774006,1.33426826306922,0.760902504450237,1.89811624617805,0,0,0.198956472041151,0.58489226135736,0,1.51296634912286,1.7922714592893,0.948339504765408,0.799739588268102,0,1.01825663922657,1.74557238450863,1.05203729835478,1.3279672796094,2.50937251565324,2.66897837330337,1.72756029490521,4.44678940630723,0.83422552858047,1.17935397067922,2.24862112384854,1.21716072833102,1.20588579876208,3.31013607315846,2.01387296215567,1.13494658742525,2.19649130550465,1.43768206527355,2.23284568601102,1.5601883655728,3.28352541331245,2.87035861635059,3.37710464954357,2.03228509183265,1.13694847062291,0.651859905768103,1.52770577197669,1.64283173801951,1.00503754465089,2.38043640886014,0.780534591431195,0.315270288212382,0.664394068946325,1.2756381492599,0.81931657357869,0.518054945597687,0.723245292907558,0,0,8.35999264132362,5.51873492609465,6.58257418949947,5.39173758324135,0.491804836130026,4.03953483526997,1.89304931649754,1.17131623288992,0.861693590931196,0.716906393857656,0.445597348164788,0.283076530788832,0,1.16902343164525,0,1.60660658210904,0.851640511249612,0.712262414669021,0.651547837414304,0.989820737835213,1.32745138339963,0.971122544619926,1.209294227859,3.39489143560617,2.65771703592696,2.15204603560749,1.55056975900933,1.09060118843252,2.49548164869305,5.37262488490887,3.16255825724996,2.06271086496374,4.76615448055303,0.540183282093931,1.55230420539305,0.857348140126369,0.532020700926821,1.96205699362278,1.64549020602121,1.8267896946876,1.40803024838226,0,1.54369878638473,1.15420377059036,0.645857706783622,1.20625849856312,1.67121281604391,1.31312719796049,0,8.34413859047294,1.53783792718067,1.03193433981611,1.11116716421827,0.753473828018764,1.0935538217682,1.14389086603261,0.339956859987711,0.279902904647316,0.138199973804424,0.954670618015114,0.949007980743406,1.42323626988794,0.972048067396211,1.04544148007234,0.436725127492355,0.404593039154462,0.909188012978695,2.35580347785627,0.90730481304255,1.24267862617385,5.07323644815771,2.24274819065968,2.15096037594227,1.55560950675238,1.93739735216597,1.68956125490778,1.5256441023948,1.5624526181274,1.99232754408851,2.89900944991207,4.89651010638371,1.26404448251271,0.608175645870493,1.54066435747241,0.649604114888975,0.358053391334963,0,0.360586348559907,0.295379054349154,0.504832249740738,0.381034033274999,0.201652370273681,0.0974578807397524,0.577271049841977,0.350630706544707,2.26730383615211,0.665957860122194,0.62799699626633,0.335769232728157,0.772758376128762,0.750729901804728,0.549454872801795,1.92931541171159,1.50471631210609,4.51801474093653,4.14292712856459,1.14579102687879,3.09335728218638,3.42541259885321,1.5107877947794,2.70009000092722,4.95353323546643,2.71885445390523,5.1776031175182,0.726511433089237,1.19707462020309,2.90247129782028,0.486213434136588,1.25767897576789,1.83843508450014,2.22246727801615,2.26638562962784,2.56735367673452,1.51618327058278,2.02783439912192,2.45214243801899,2.06011316433741,2.11283002936069,2.01024141344646,2.85776214769844,2.31768651889711,1.54327376370964,2.06042950401653,2.20798380201596,1.37147700954166,1.77475806159337,2.86123427936785,1.74415699958794,1.59985946706062,1.77690676572521,1.46342378298218,1.31534855718921,2.17286582153379,2.24456908663095,1.54225523561426,1.37906275325789,1.63692417267876,1.70430525304563,1.35034627686799,2.99772693525535,0.935726433781634,1.50409737833809,1.14772999241306,1.76473135295612,1.62307484934295
|short_description=p7@Pcx
}}

Latest revision as of 20:28, 25 September 2015

Short description:p7@Pcx
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Pcx_5end
Coexpression cluster:NA
Association with transcript: -13bp_to_ENSMUST00000163318_5end
EntrezGene:Pcx
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Pcx

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I36.28
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H17.52
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A46.89
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I12.51
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H25.52
medulla oblongata, adult.CNhs10477.17-12C26.58
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.34
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain4.17e-1147
future brain4.17e-1147
regional part of brain4.41e-1146
neural tube2.84e-1052
neural rod2.84e-1052
future spinal cord2.84e-1052
neural keel2.84e-1052
regional part of nervous system3.96e-1054
neurectoderm9.21e-1064
neural plate9.21e-1064
presumptive neural plate9.21e-1064
ecto-epithelium3.92e-0973
central nervous system2.53e-0873
anterior neural tube4.04e-0840
pre-chordal neural plate4.35e-0849
structure with developmental contribution from neural crest8.04e-0892
ectoderm-derived structure9.57e-0895
ectoderm9.57e-0895
presumptive ectoderm9.57e-0895
brain grey matter1.19e-0729
regional part of telencephalon1.19e-0729
telencephalon1.19e-0729
regional part of forebrain1.44e-0739
forebrain1.44e-0739
future forebrain1.44e-0739
nervous system1.56e-0775
tube1.67e-07114
cerebral cortex3.67e-0721
cerebral hemisphere3.67e-0721
pallium3.67e-0721
anatomical conduit4.76e-07122
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