Personal tools

FFCP PHASE1:Mm9::chr19:4615647..4615700,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=225875
|EntrezGene=225875
|HGNC=
|HGNC=
|MCL_coexpression_id=1267
|TSSclassifier=NA
|UniProt=Q80XU8
|UniProt=Q80XU8
|association_with_transcript=0bp_to_ENSMUST00000113822,NM_153388,uc008gai.2_5end
|association_with_transcript=0bp_to_ENSMUST00000113822,NM_153388,uc008gai.2_5end
|cluster_id=chr19:4615647..4615700,-
|description=CAGE_peak_2_at_Lrfn4_5end
|description=CAGE_peak_2_at_Lrfn4_5end
|id=chr19:4615647..4615700,-
|id=chr19:4615647..4615700,-
|ontology_enrichment_celltype=CL:0000221!1.19e-09!44;CL:0000133!1.19e-09!44;CL:0002319!3.33e-09!43;CL:0000055!4.56e-08!50;CL:0000540!4.67e-08!33;CL:0000047!4.67e-08!33;CL:0000031!4.67e-08!33;CL:0000404!4.67e-08!33;CL:0000393!3.81e-07!39;CL:0000211!3.81e-07!39
|ontology_enrichment_celltype=CL:0000221!1.19e-09!44;CL:0000133!1.19e-09!44;CL:0002319!3.33e-09!43;CL:0000055!4.56e-08!50;CL:0000540!4.67e-08!33;CL:0000047!4.67e-08!33;CL:0000031!4.67e-08!33;CL:0000404!4.67e-08!33;CL:0000393!3.81e-07!39;CL:0000211!3.81e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000221,1.31e-09,44;CL:0000133,1.31e-09,44;CL:0002319,3.76e-09,43;CL:0000540,6.14e-08,33;CL:0000047,6.14e-08,33;CL:0000031,6.14e-08,33;CL:0000404,6.14e-08,33;CL:0000393,3.54e-07,39;CL:0000211,3.54e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.15e-13!73;UBERON:0005743!1.15e-13!73;UBERON:0000073!3.27e-13!75;UBERON:0001016!3.27e-13!75;UBERON:0004121!6.00e-12!102;UBERON:0000924!6.00e-12!102;UBERON:0006601!6.00e-12!102;UBERON:0002346!4.81e-10!71;UBERON:0003075!4.81e-10!71;UBERON:0007284!4.81e-10!71;UBERON:0001049!1.09e-08!52;UBERON:0005068!1.09e-08!52;UBERON:0006241!1.09e-08!52;UBERON:0007135!1.09e-08!52;UBERON:0003056!2.94e-08!49;UBERON:0000033!6.79e-08!63;UBERON:0002780!2.53e-07!39;UBERON:0001890!2.53e-07!39;UBERON:0006240!2.53e-07!39;UBERON:0003080!3.38e-07!40;UBERON:0000955!5.80e-07!50;UBERON:0006238!5.80e-07!50;UBERON:0002020!8.99e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.45e-13,73;UBERON:0001016,6.86e-13,75;UBERON:0004121,5.98e-12,95;UBERON:0000924,5.98e-12,95;UBERON:0006601,5.98e-12,95;UBERON:0010314,3.33e-11,92;UBERON:0002346,1.53e-10,64;UBERON:0003075,1.53e-10,64;UBERON:0007284,1.53e-10,64;UBERON:0010371,1.91e-09,73;UBERON:0001049,1.82e-08,52;UBERON:0005068,1.82e-08,52;UBERON:0006241,1.82e-08,52;UBERON:0007135,1.82e-08,52;UBERON:0003056,3.72e-08,49;UBERON:0000073,1.20e-07,54;UBERON:0000955,1.77e-07,47;UBERON:0006238,1.77e-07,47;UBERON:0002780,3.17e-07,39;UBERON:0001890,3.17e-07,39;UBERON:0006240,3.17e-07,39;UBERON:0003080,4.21e-07,40;UBERON:0002616,5.41e-07,46
|phase1_expression=4.32401887182944,0,0,0,0,0.33575854382378,0.233612640595526,0.129123323441576,0.140788722151667,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0,0,0.850432901510698,1.68794617041505,3.39559725880616,0,0,0,0.430761996159075,0,0.190023419456374,0,0.221730510655305,4.44521471421742,3.07532393792285,0,0.577703239502549,0.332469290716985,0.408338712524738,0,0,0,0,0,0,1.76255545165808,2.12891555560981,4.40512205188036,6.25913075478431,12.4274339136855,2.63623419281366,1.94429899074283,3.91961980551015,2.87505128729943,0,0,0.336093799142464,2.31533492432352,2.57880095944881,0,7.08107613008592,11.6378015439847,6.97214543856797,4.40497891689872,1.77858959222228,0.449949858640699,0,0.7104801149461,4.19440154725767,11.5265491596466,6.73982480005105,4.99521971827255,7.99234853135252,5.14171771926846,4.41737081903227,6.1245399607477,6.61333750025831,6.43453150627015,1.10115880999389,1.14918604276669,0.921639199537461,6.06676923558892,6.40413505216868,2.6045668527838,1.3959149950069,0.56276261003168,1.98637722109853,8.54422897873636,5.26775218956681,5.21918448310842,1.51452386666368,1.36028808192214,0,0.860423876981386,0,0,0,0,0.702222100658759,6.30592193538814,7.79358013808606,5.65343319216544,6.90132756905734,0,0,7.11066703153331,1.29894624606728,0.760079596425296,1.01104889002957,0.11418387971906,0,0.593768556259299,3.99016251562112,2.74018930480927,2.99800146432876,1.50722640552623,2.11659672844269,0.628332956648377,1.48316980640624,0.144599356919912,0,2.42650274921114,0.441683036920787,1.45462575940567,1.86391761218122,2.04946557908083,1.67557365450764,0,0.958520996047362,0,2.03312363316904,1.9472783122627,0.915001205637253,8.67015029578764,2.78118912307642,4.09144731728529,2.28566849015516,2.92034273521964,3.46253837091075,0.870848794270651,0,0,7.54698569183682,7.12696523743766,6.84236093260327,4.37043971723574,3.60593445502038,4.61209393025459,3.65436725782942,0.776110112217047,12.5029435901048,9.8335161687266,10.5570674498369,6.57587197282724,4.44875598760957,3.48252166522167,4.52720700097476,8.55847347319521,1.40442637462647,1.02939162845886,0.568326998791185,6.00664740352955,7.03578179943289,4.32148947506436,6.8655973319711,2.95146347621106,3.5481435964097,5.34828072925938,4.02410102099429,1.40118410840603,2.79751744852917,0.820837320395476,1.4592385718254,2.19299981137998,4.39100230582101,2.01309628140558,3.57492912559016,6.79170441703277,0,0,14.5036010363959,9.75394021813842,7.08771037271513,4.43703754171354,4.22518283305254,2.66315876557583,1.89811624617805,0.329397909448022,1.25667604400135,0.397912944082302,1.75467678407208,0,0.216138049874694,0.597423819763102,7.96605184002943,5.9409226557059,6.76246414038483,3.05476991767971,3.68509725618489,3.29638353484497,1.51767689098217,0,0.156998727841375,0.123397163921801,0,1.83529616287703,0.393117990226406,0.674586337154561,0.608580364165509,0.241177159752417,0,0.287696137450811,0.486405680325106,0.549122826376163,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0,0.369506380333209,11.7484675297701,7.82231886921724,4.58311731593008,5.86725620721255,3.68513766371995,3.57065461329021,1.36593553500459,2.67979744980525,2.21464689648775,1.2756381492599,0.81931657357869,0.690739927463582,0.289298117163023,0,0,0,0.827810238914197,0.80275294993896,1.40654023910644,4.75411341592359,0.757412781613119,4.10160685241134,4.29482618726302,7.75524231838076,5.25731355495614,4.90157082981267,2.26461224631066,4.45291771842384,7.3063964477828,4.74345333535828,9.3183181762324,2.2710413633323,5.52003371368491,4.56083486190013,2.47455184458803,0,4.61283208694465,4.23252979750651,0.754420319023592,2.65771703592696,2.15204603560749,1.29214146584111,2.18120237686503,1.06949213515416,0,1.05418608574999,1.03135543248187,1.02131881726136,8.8229936075342,6.20921682157222,7.28745919107414,4.43350584105684,5.35106452806212,5.59466670047211,5.78483403317739,0.938686832254841,0.42366414172764,0,0.98931751764888,2.26050197374268,1.86970067277283,3.34242563208782,1.31312719796049,0.582961673259701,1.48340241608408,0.341741761595705,5.15967169908056,1.66675074632741,0.376736914009382,0.27338845544205,0.228778173206523,0.339956859987711,0.419854356970974,0.690999869022119,0,15.3422956886851,6.91286188231286,5.07625101862466,3.55450103224597,2.62035076495413,1.48350781023303,2.14898984885873,1.30877970992015,0.388844919875379,0,0.56369293868419,5.23307911153926,6.9492565991981,6.80579159204167,6.97463046779748,4.05494701177868,4.3422178298929,2.604087696879,1.67774951081137,0.241584120826006,0,0,6.28448167399509,4.21114924375792,1.68897069871134,1.79026695667481,1.58945083825012,1.32214994471966,0.738447635872886,0.807731599585181,0.762068066549998,0.100826185136841,0.194915761479505,0.673482891482306,0.116876902181569,1.13365191807606,0.887943813496259,0.358855426437903,0,1.15913756419314,1.31377732815827,2.38097111547445,1.92931541171159,0.501572104035363,3.3885110557024,4.14292712856459,2.29158205375759,3.09335728218638,6.16574267793578,3.0215755895588,6.07520250208625,3.15224842256954,2.26571204492102,4.65984280576638,4.04770655578289,6.78342284781753,8.36594668195257,3.8897074730927,1.67690530102386,2.75765262675021,2.66696073361938,3.91466608753899,3.85103051510178,2.52697211763797,2.02783439912192,3.77252682772152,3.27745276144588,3.13723246783859,2.92920891673628,2.85776214769844,3.1288768005111,1.92909220463705,3.70877310722976,2.06078488188156,3.77156177623957,3.72699192934609,2.14592570952589,2.76158191601424,3.01150017329058,1.69229215783353,2.56099162021882,2.36762740294059,3.39510284614654,1.68342681497322,3.44041552560105,4.0386837773981,2.45538625901814,2.47898945897546,4.24394544158511,7.49431733813838,2.8071793013449,4.08255002691767,3.06061331310149,2.64709702943419,2.31867835620421
|phase1_expression=4.32401887182944,0,0,0,0,0.33575854382378,0.233612640595526,0.129123323441576,0.140788722151667,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0,0,0.850432901510698,1.68794617041505,3.39559725880616,0,0,0,0.430761996159075,0,0.190023419456374,0,0.221730510655305,4.44521471421742,3.07532393792285,0,0.577703239502549,0.332469290716985,0.408338712524738,0,0,0,0,0,0,1.76255545165808,2.12891555560981,4.40512205188036,6.25913075478431,12.4274339136855,2.63623419281366,1.94429899074283,3.91961980551015,2.87505128729943,0,0,0.336093799142464,2.31533492432352,2.57880095944881,0,7.08107613008592,11.6378015439847,6.97214543856797,4.40497891689872,1.77858959222228,0.449949858640699,0,0.7104801149461,4.19440154725767,11.5265491596466,6.73982480005105,4.99521971827255,7.99234853135252,5.14171771926846,4.41737081903227,6.1245399607477,6.61333750025831,6.43453150627015,1.10115880999389,1.14918604276669,0.921639199537461,6.06676923558892,6.40413505216868,2.6045668527838,1.3959149950069,0.56276261003168,1.98637722109853,8.54422897873636,5.26775218956681,5.21918448310842,1.51452386666368,1.36028808192214,0,0.860423876981386,0,0,0,0,0.702222100658759,6.30592193538814,7.79358013808606,5.65343319216544,6.90132756905734,0,0,7.11066703153331,1.29894624606728,0.760079596425296,1.01104889002957,0.11418387971906,0,0.593768556259299,3.99016251562112,2.74018930480927,2.99800146432876,1.50722640552623,2.11659672844269,0.628332956648377,1.48316980640624,0.144599356919912,0,2.42650274921114,0.441683036920787,1.45462575940567,1.86391761218122,2.04946557908083,1.67557365450764,0,0.958520996047362,0,2.03312363316904,1.9472783122627,0.915001205637253,8.67015029578764,2.78118912307642,4.09144731728529,2.28566849015516,2.92034273521964,3.46253837091075,0.870848794270651,0,0,7.54698569183682,7.12696523743766,6.84236093260327,4.37043971723574,3.60593445502038,4.61209393025459,3.65436725782942,0.776110112217047,12.5029435901048,9.8335161687266,10.5570674498369,6.57587197282724,4.44875598760957,3.48252166522167,4.52720700097476,8.55847347319521,1.40442637462647,1.02939162845886,0.568326998791185,6.00664740352955,7.03578179943289,4.32148947506436,6.8655973319711,2.95146347621106,3.5481435964097,5.34828072925938,4.02410102099429,1.40118410840603,2.79751744852917,0.820837320395476,1.4592385718254,2.19299981137998,4.39100230582101,2.01309628140558,3.57492912559016,6.79170441703277,0,0,14.5036010363959,9.75394021813842,7.08771037271513,4.43703754171354,4.22518283305254,2.66315876557583,1.89811624617805,0.329397909448022,1.25667604400135,0.397912944082302,1.75467678407208,0,0.216138049874694,0.597423819763102,7.96605184002943,5.9409226557059,6.76246414038483,3.05476991767971,3.68509725618489,3.29638353484497,1.51767689098217,0,0.156998727841375,0.123397163921801,0,1.83529616287703,0.393117990226406,0.674586337154561,0.608580364165509,0.241177159752417,0,0.287696137450811,0.486405680325106,0.549122826376163,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0,0.369506380333209,11.7484675297701,7.82231886921724,4.58311731593008,5.86725620721255,3.68513766371995,3.57065461329021,1.36593553500459,2.67979744980525,2.21464689648775,1.2756381492599,0.81931657357869,0.690739927463582,0.289298117163023,0,0,0,0.827810238914197,0.80275294993896,1.40654023910644,4.75411341592359,0.757412781613119,4.10160685241134,4.29482618726302,7.75524231838076,5.25731355495614,4.90157082981267,2.26461224631066,4.45291771842384,7.3063964477828,4.74345333535828,9.3183181762324,2.2710413633323,5.52003371368491,4.56083486190013,2.47455184458803,0,4.61283208694465,4.23252979750651,0.754420319023592,2.65771703592696,2.15204603560749,1.29214146584111,2.18120237686503,1.06949213515416,0,1.05418608574999,1.03135543248187,1.02131881726136,8.8229936075342,6.20921682157222,7.28745919107414,4.43350584105684,5.35106452806212,5.59466670047211,5.78483403317739,0.938686832254841,0.42366414172764,0,0.98931751764888,2.26050197374268,1.86970067277283,3.34242563208782,1.31312719796049,0.582961673259701,1.48340241608408,0.341741761595705,5.15967169908056,1.66675074632741,0.376736914009382,0.27338845544205,0.228778173206523,0.339956859987711,0.419854356970974,0.690999869022119,0,15.3422956886851,6.91286188231286,5.07625101862466,3.55450103224597,2.62035076495413,1.48350781023303,2.14898984885873,1.30877970992015,0.388844919875379,0,0.56369293868419,5.23307911153926,6.9492565991981,6.80579159204167,6.97463046779748,4.05494701177868,4.3422178298929,2.604087696879,1.67774951081137,0.241584120826006,0,0,6.28448167399509,4.21114924375792,1.68897069871134,1.79026695667481,1.58945083825012,1.32214994471966,0.738447635872886,0.807731599585181,0.762068066549998,0.100826185136841,0.194915761479505,0.673482891482306,0.116876902181569,1.13365191807606,0.887943813496259,0.358855426437903,0,1.15913756419314,1.31377732815827,2.38097111547445,1.92931541171159,0.501572104035363,3.3885110557024,4.14292712856459,2.29158205375759,3.09335728218638,6.16574267793578,3.0215755895588,6.07520250208625,3.15224842256954,2.26571204492102,4.65984280576638,4.04770655578289,6.78342284781753,8.36594668195257,3.8897074730927,1.67690530102386,2.75765262675021,2.66696073361938,3.91466608753899,3.85103051510178,2.52697211763797,2.02783439912192,3.77252682772152,3.27745276144588,3.13723246783859,2.92920891673628,2.85776214769844,3.1288768005111,1.92909220463705,3.70877310722976,2.06078488188156,3.77156177623957,3.72699192934609,2.14592570952589,2.76158191601424,3.01150017329058,1.69229215783353,2.56099162021882,2.36762740294059,3.39510284614654,1.68342681497322,3.44041552560105,4.0386837773981,2.45538625901814,2.47898945897546,4.24394544158511,7.49431733813838,2.8071793013449,4.08255002691767,3.06061331310149,2.64709702943419,2.31867835620421
|short_description=p2@Lrfn4
|short_description=p2@Lrfn4
}}
}}

Latest revision as of 20:56, 25 September 2015

Short description:p2@Lrfn4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lrfn4_5end
Coexpression cluster:MCL_coexpression_mm9:1267
Association with transcript: 0bp_to_ENSMUST00000113822, NM_153388, uc008gai.2_5end
EntrezGene:Lrfn4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lrfn4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.43
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.61
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F18.67
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C67.55
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C63.61
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E212.50
forelimb, embryo E12.CNhs10600.359-14H29.83
forelimb, embryo E13.CNhs10589.384-1E210.56
forelimb, embryo E14.CNhs10577.413-26A86.58
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I68.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E96.01
heart, embryo E12.CNhs11015.353-12F57.04
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D46.87
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E55.35
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G16.79
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I514.50
intestine, embryo E13.CNhs11010.381-16D59.75
intestine, embryo E15.CNhs10602.976-16D87.09
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F85.94
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G73.30
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G211.75
lung, embryo E14.CNhs10604.404-26F87.82
lung, embryo E15.CNhs11020.432-17C54.58
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E68.82
pituitary gland, embryo E13.CNhs11009.370-44C76.21
pituitary gland, embryo E14.CNhs11037.398-44A57.29
pituitary gland, embryo E15.CNhs10592.427-16B94.43
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.87
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E315.34
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C56.95
testis, embryo E16.CNhs11033.470-26G56.81
testis, embryo E17.CNhs11029.486-18I56.97
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B74.34
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I46.28
thymus, embryo E15.CNhs11005.430-45I24.21
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I84.05
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H28.37
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.31e-0944
neurectodermal cell1.31e-0944
neural cell3.76e-0943
neuron6.14e-0833
neuronal stem cell6.14e-0833
neuroblast6.14e-0833
electrically signaling cell6.14e-0833
electrically responsive cell3.54e-0739
electrically active cell3.54e-0739
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:4615647..4615700,-&oldid=4213641"