FFCP PHASE1:Mm9::chr2:156246819..156246850,+: Difference between revisions
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{{FFCP|EntrezGene=13821|HGNC=|MCL_coexpression_id=22|UniProt=A2AUK5,A2AUK8,E9PV14|association_with_transcript=0bp_to_ENSMUST00000103136,ENSMUST00000109577,ENSMUST00000125153_5end|description=CAGE_peak_2_at_Epb4.1l1_5end|id=chr2:156246819..156246850,+|ontology_enrichment_celltype=CL:0000117!2.52e-15!23;CL:0000337!2.52e-15!23;CL:0000540!7.24e-09!33;CL:0000047!7.24e-09!33;CL:0000031!7.24e-09!33;CL:0000404!7.24e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.36e-15,23;CL:0000337,1.36e-15,23;CL:0000540,7.96e-09,33;CL:0000047,7.96e-09,33;CL:0000031,7.96e-09,33;CL:0000404,7.96e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.26e-14!34;UBERON:0002346!2.20e-13!71;UBERON:0003075!2.20e-13!71;UBERON:0007284!2.20e-13!71;UBERON:0004121!2.82e-13!102;UBERON:0000924!2.82e-13!102;UBERON:0006601!2.82e-13!102;UBERON:0001049!5.85e-13!52;UBERON:0005068!5.85e-13!52;UBERON:0006241!5.85e-13!52;UBERON:0007135!5.85e-13!52;UBERON:0000033!7.69e-13!63;UBERON:0000955!5.55e-12!50;UBERON:0006238!5.55e-12!50;UBERON:0003056!5.75e-12!49;UBERON:0001017!1.42e-11!73;UBERON:0005743!1.42e-11!73;UBERON:0003080!1.77e-11!40;UBERON:0002616!1.96e-11!49;UBERON:0002791!3.46e-11!29;UBERON:0003528!3.46e-11!29;UBERON:0001893!3.46e-11!29;UBERON:0002780!5.36e-11!39;UBERON:0001890!5.36e-11!39;UBERON:0006240!5.36e-11!39;UBERON:0000073!1.28e-10!75;UBERON:0001016!1.28e-10!75;UBERON:0000468!6.81e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.36e-15,34;UBERON:0000073,6.60e-15,54;UBERON:0001049,1.92e-13,52;UBERON:0005068,1.92e-13,52;UBERON:0006241,1.92e-13,52;UBERON:0007135,1.92e-13,52;UBERON:0002346,1.33e-12,64;UBERON:0003075,1.33e-12,64;UBERON:0007284,1.33e-12,64;UBERON:0010371,1.65e-12,73;UBERON:0003056,1.85e-12,49;UBERON:0003080,5.58e-12,40;UBERON:0004121,7.40e-12,95;UBERON:0000924,7.40e-12,95;UBERON:0006601,7.40e-12,95;UBERON:0001017,8.83e-12,73;UBERON:0003528,1.00e-11,29;UBERON:0002791,1.00e-11,29;UBERON:0001893,1.00e-11,29;UBERON:0002780,1.74e-11,39;UBERON:0001890,1.74e-11,39;UBERON:0006240,1.74e-11,39;UBERON:0000955,4.67e-11,47;UBERON:0006238,4.67e-11,47;UBERON:0001016,1.24e-10,75;UBERON:0002616,1.64e-10,46;UBERON:0000956,4.56e-07,21;UBERON:0001869,4.56e-07,21;UBERON:0000203,4.56e-07,21|phase1_expression=4.80446541314382,3.83872948403297,6.3699893514535,1.51232105653415,1.00179145989269,3.69334398206158,2.80335168714631,0,1.54867594366833,0.468129052643987,0,0,1.71200729931206,0,0.666219523631325,0.202475267389826,0.699561878128147,0.315462165358238,0.274228867211478,0,4.42225108785563,0,0,3.99981056983517,3.44113921600755,3.44539178469012,2.58457197695445,3.01659725760245,4.3705386474966,1.51218077855958,3.32595765982957,0,0,0,0,0,0.816677425049476,0,0,0.523523743973798,0,0,0,1.1330713617802,1.62203089951223,1.83546752161682,3.9119567217402,0.436050312760893,0,0,0.979904951377538,0,0,1.45072428402269,0,0.257259436035947,0.286533439938757,1.54701627683233,46.9374189194267,52.3701069479313,39.2975470173831,3.72728985276045,0.889294796111139,4.94944844504769,1.97773272513395,3.5524005747305,4.19440154725767,2.68952813725088,18.7678198278345,23.0860154547191,22.2944459032465,30.8503063156108,34.2346238475001,18.9860738783179,22.6195311603038,26.6573448116906,12.1127469099328,10.5980490610706,13.5173749265494,49.3254716110925,50.5011792685301,43.7567231267678,12.8424179540635,16.8828783009504,16.5022107598955,33.2930301585245,40.5759290277443,41.0078780815661,0.530083353332288,0.755715601067855,17.3918693221007,2.58127163094416,0.679971333707751,0.539703191637817,0,0,1.26399978118577,6.98764322570037,5.71529210126311,7.42013106471715,4.64783285263046,3.84979432242953,7.64415719119937,7.11066703153331,4.76280290224671,6.33399663687746,6.0662933401774,2.05530983494308,0.258937883647172,6.82833839698194,2.08182392119363,7.30717147949139,8.30215790121811,7.83757730873637,6.46737889246376,4.64966387919799,4.20231445148436,5.78397427679647,2.65383165584962,1.61766849947409,1.98757366614354,0.484875253135222,9.31958806090611,1.17112318804619,1.25668024088073,7.15279754584056,0.239630249011841,0,0,13.481157546434,19.6725259212009,34.8062555352634,8.69121600961382,7.41574826257959,14.5451631191692,10.8701646255398,1.12023300235348,1.61729061793121,0.758168275301024,7.36546495602659,1.17108398666433,3.90833577536904,5.94205028357652,6.17889753126432,5.98721192531685,5.76511741281824,4.96619140166563,6.98499100995342,1.29340795759705,2.45837904218165,3.16712023495108,3.06874025398605,5.28289773528636,1.74126083261083,3.08673204611915,2.7864797354589,0,0,0,2.27838349789052,2.81431271977315,0.36012412292203,0.946978942340841,0.983821158737019,0.308534225774757,0.930135779001631,1.60964040839772,0.467061369468678,0.493679549740441,1.31333971263276,1.54030738137126,0.877199924551994,1.09775057645525,0.536825675041487,14.0894265537965,30.4597652642682,13.8775888853195,0.528901133327089,0.639864751605702,3.71578674976702,2.83508414908605,3.83198696784351,0.889512175379481,1.14135375667535,1.89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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13821 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=A2AUK5,A2AUK8,E9PV14 | |||
|association_with_transcript=0bp_to_ENSMUST00000103136,ENSMUST00000109577,ENSMUST00000125153_5end | |||
|cluster_id=chr2:156246819..156246850,+ | |||
|description=CAGE_peak_2_at_Epb4.1l1_5end | |||
|id=chr2:156246819..156246850,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.52e-15!23;CL:0000337!2.52e-15!23;CL:0000540!7.24e-09!33;CL:0000047!7.24e-09!33;CL:0000031!7.24e-09!33;CL:0000404!7.24e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.36e-15,23;CL:0000337,1.36e-15,23;CL:0000540,7.96e-09,33;CL:0000047,7.96e-09,33;CL:0000031,7.96e-09,33;CL:0000404,7.96e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.26e-14!34;UBERON:0002346!2.20e-13!71;UBERON:0003075!2.20e-13!71;UBERON:0007284!2.20e-13!71;UBERON:0004121!2.82e-13!102;UBERON:0000924!2.82e-13!102;UBERON:0006601!2.82e-13!102;UBERON:0001049!5.85e-13!52;UBERON:0005068!5.85e-13!52;UBERON:0006241!5.85e-13!52;UBERON:0007135!5.85e-13!52;UBERON:0000033!7.69e-13!63;UBERON:0000955!5.55e-12!50;UBERON:0006238!5.55e-12!50;UBERON:0003056!5.75e-12!49;UBERON:0001017!1.42e-11!73;UBERON:0005743!1.42e-11!73;UBERON:0003080!1.77e-11!40;UBERON:0002616!1.96e-11!49;UBERON:0002791!3.46e-11!29;UBERON:0003528!3.46e-11!29;UBERON:0001893!3.46e-11!29;UBERON:0002780!5.36e-11!39;UBERON:0001890!5.36e-11!39;UBERON:0006240!5.36e-11!39;UBERON:0000073!1.28e-10!75;UBERON:0001016!1.28e-10!75;UBERON:0000468!6.81e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.36e-15,34;UBERON:0000073,6.60e-15,54;UBERON:0001049,1.92e-13,52;UBERON:0005068,1.92e-13,52;UBERON:0006241,1.92e-13,52;UBERON:0007135,1.92e-13,52;UBERON:0002346,1.33e-12,64;UBERON:0003075,1.33e-12,64;UBERON:0007284,1.33e-12,64;UBERON:0010371,1.65e-12,73;UBERON:0003056,1.85e-12,49;UBERON:0003080,5.58e-12,40;UBERON:0004121,7.40e-12,95;UBERON:0000924,7.40e-12,95;UBERON:0006601,7.40e-12,95;UBERON:0001017,8.83e-12,73;UBERON:0003528,1.00e-11,29;UBERON:0002791,1.00e-11,29;UBERON:0001893,1.00e-11,29;UBERON:0002780,1.74e-11,39;UBERON:0001890,1.74e-11,39;UBERON:0006240,1.74e-11,39;UBERON:0000955,4.67e-11,47;UBERON:0006238,4.67e-11,47;UBERON:0001016,1.24e-10,75;UBERON:0002616,1.64e-10,46;UBERON:0000956,4.56e-07,21;UBERON:0001869,4.56e-07,21;UBERON:0000203,4.56e-07,21 | |||
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| |||
|short_description=p2@Epb4.1l1 | |||
}} |
Latest revision as of 23:57, 25 September 2015
Short description: | p2@Epb4.1l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Epb4.1l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000103136, ENSMUST00000109577, ENSMUST00000125153_5end |
EntrezGene: | Epb4.1l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.36e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.36e-15 | 23 |
neuron | 7.96e-09 | 33 |
neuronal stem cell | 7.96e-09 | 33 |
neuroblast | 7.96e-09 | 33 |
electrically signaling cell | 7.96e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
gray matter | 5.36e-15 | 34 |
regional part of nervous system | 6.60e-15 | 54 |
neural tube | 1.92e-13 | 52 |
neural rod | 1.92e-13 | 52 |
future spinal cord | 1.92e-13 | 52 |
neural keel | 1.92e-13 | 52 |
neurectoderm | 1.33e-12 | 64 |
neural plate | 1.33e-12 | 64 |
presumptive neural plate | 1.33e-12 | 64 |
ecto-epithelium | 1.65e-12 | 73 |
pre-chordal neural plate | 1.85e-12 | 49 |
anterior neural tube | 5.58e-12 | 40 |
ectoderm-derived structure | 7.40e-12 | 95 |
ectoderm | 7.40e-12 | 95 |
presumptive ectoderm | 7.40e-12 | 95 |
central nervous system | 8.83e-12 | 73 |
brain grey matter | 1.00e-11 | 29 |
regional part of telencephalon | 1.00e-11 | 29 |
telencephalon | 1.00e-11 | 29 |
regional part of forebrain | 1.74e-11 | 39 |
forebrain | 1.74e-11 | 39 |
future forebrain | 1.74e-11 | 39 |
brain | 4.67e-11 | 47 |
future brain | 4.67e-11 | 47 |
nervous system | 1.24e-10 | 75 |
regional part of brain | 1.64e-10 | 46 |
cerebral cortex | 4.56e-07 | 21 |
cerebral hemisphere | 4.56e-07 | 21 |
pallium | 4.56e-07 | 21 |