FFCP PHASE1:Mm9::chr14:55482892..55482988,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:55482892..55482988,-
|short_description=p1@Homez
|description=CAGE_peak_1_at_Homez_5end
|association_with_transcript=6bp_to_ENSMUST00000142283,NM_00117770...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=239099 | |EntrezGene=239099 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=Q80W88 | |UniProt=Q80W88 | ||
|association_with_transcript=6bp_to_ENSMUST00000142283,NM_001177705,uc007txd.2_5end | |||
|cluster_id=chr14:55482892..55482988,- | |||
|description=CAGE_peak_1_at_Homez_5end | |||
|id=chr14:55482892..55482988,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.84e-16!102;UBERON:0000924!1.84e-16!102;UBERON:0006601!1.84e-16!102;UBERON:0002346!3.34e-15!71;UBERON:0003075!3.34e-15!71;UBERON:0007284!3.34e-15!71;UBERON:0000033!7.44e-15!63;UBERON:0001017!3.27e-13!73;UBERON:0005743!3.27e-13!73;UBERON:0001049!2.48e-12!52;UBERON:0005068!2.48e-12!52;UBERON:0006241!2.48e-12!52;UBERON:0007135!2.48e-12!52;UBERON:0000955!5.11e-12!50;UBERON:0006238!5.11e-12!50;UBERON:0000073!5.64e-12!75;UBERON:0001016!5.64e-12!75;UBERON:0003056!7.01e-12!49;UBERON:0002616!7.42e-12!49;UBERON:0003080!7.43e-09!40;UBERON:0000153!2.46e-08!94;UBERON:0000489!2.49e-08!21;UBERON:0002780!2.51e-08!39;UBERON:0001890!2.51e-08!39;UBERON:0006240!2.51e-08!39;UBERON:0007811!8.50e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.79e-16,95;UBERON:0000924,9.79e-16,95;UBERON:0006601,9.79e-16,95;UBERON:0010371,1.51e-15,73;UBERON:0002346,9.69e-15,64;UBERON:0003075,9.69e-15,64;UBERON:0007284,9.69e-15,64;UBERON:0001017,3.27e-13,73;UBERON:0000073,3.68e-13,54;UBERON:0001049,2.47e-12,52;UBERON:0005068,2.47e-12,52;UBERON:0006241,2.47e-12,52;UBERON:0007135,2.47e-12,52;UBERON:0001016,5.64e-12,75;UBERON:0003056,7.01e-12,49;UBERON:0000955,1.22e-10,47;UBERON:0006238,1.22e-10,47;UBERON:0002616,1.76e-10,46;UBERON:0003080,7.43e-09,40;UBERON:0010314,2.24e-08,92;UBERON:0000489,2.48e-08,21;UBERON:0002780,2.51e-08,39;UBERON:0001890,2.51e-08,39;UBERON:0006240,2.51e-08,39 | |||
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| ||
|short_description=p1@Homez | |||
}} | }} |
Latest revision as of 02:38, 26 September 2015
Short description: | p1@Homez |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Homez_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 6bp_to_ENSMUST00000142283, NM_001177705, uc007txd.2_5end |
EntrezGene: | Homez |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.79e-16 | 95 |
ectoderm | 9.79e-16 | 95 |
presumptive ectoderm | 9.79e-16 | 95 |
ecto-epithelium | 1.51e-15 | 73 |
neurectoderm | 9.69e-15 | 64 |
neural plate | 9.69e-15 | 64 |
presumptive neural plate | 9.69e-15 | 64 |
central nervous system | 3.27e-13 | 73 |
regional part of nervous system | 3.68e-13 | 54 |
neural tube | 2.47e-12 | 52 |
neural rod | 2.47e-12 | 52 |
future spinal cord | 2.47e-12 | 52 |
neural keel | 2.47e-12 | 52 |
nervous system | 5.64e-12 | 75 |
pre-chordal neural plate | 7.01e-12 | 49 |
brain | 1.22e-10 | 47 |
future brain | 1.22e-10 | 47 |
regional part of brain | 1.76e-10 | 46 |
anterior neural tube | 7.43e-09 | 40 |
structure with developmental contribution from neural crest | 2.24e-08 | 92 |
cavitated compound organ | 2.48e-08 | 21 |
regional part of forebrain | 2.51e-08 | 39 |
forebrain | 2.51e-08 | 39 |
future forebrain | 2.51e-08 | 39 |