FFCP PHASE1:Mm9::chr1:108656270..108656302,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70750 | |EntrezGene=70750 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3220 | |||
|TSSclassifier=NA | |||
|UniProt=Q6GV12,Q8CII3 | |UniProt=Q6GV12,Q8CII3 | ||
|association_with_transcript=16bp_to_ENSMUST00000010049,NM_027534,uc007cgy.2_5end | |association_with_transcript=16bp_to_ENSMUST00000010049,NM_027534,uc007cgy.2_5end | ||
|cluster_id=chr1:108656270..108656302,- | |||
|description=CAGE_peak_2_at_Kdsr_5end | |description=CAGE_peak_2_at_Kdsr_5end | ||
|id=chr1:108656270..108656302,- | |id=chr1:108656270..108656302,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.26e-13!63;UBERON:0004121!1.53e-11!102;UBERON:0000924!1.53e-11!102;UBERON:0006601!1.53e-11!102;UBERON:0000475!1.35e-10!200;UBERON:0000153!2.71e-10!94;UBERON:0000955!3.05e-10!50;UBERON:0006238!3.05e-10!50;UBERON:0007811!5.18e-10!86;UBERON:0002616!5.88e-10!49;UBERON:0003056!3.19e-09!49;UBERON:0002346!9.40e-09!71;UBERON:0003075!9.40e-09!71;UBERON:0007284!9.40e-09!71;UBERON:0001049!3.74e-08!52;UBERON:0005068!3.74e-08!52;UBERON:0006241!3.74e-08!52;UBERON:0007135!3.74e-08!52;UBERON:0003080!9.66e-08!40;UBERON:0002780!1.27e-07!39;UBERON:0001890!1.27e-07!39;UBERON:0006240!1.27e-07!39;UBERON:0007023!1.41e-07!51;UBERON:0002791!1.47e-07!29;UBERON:0003528!1.47e-07!29;UBERON:0001893!1.47e-07!29;UBERON:0000073!2.06e-07!75;UBERON:0001016!2.06e-07!75;UBERON:0000956!5.15e-07!21;UBERON:0001869!5.15e-07!21;UBERON:0000203!5.15e-07!21;UBERON:0001017!5.99e-07!73;UBERON:0005743!5.99e-07!73;UBERON:0002619!9.94e-07!17 | |ontology_enrichment_uberon=UBERON:0000033!4.26e-13!63;UBERON:0004121!1.53e-11!102;UBERON:0000924!1.53e-11!102;UBERON:0006601!1.53e-11!102;UBERON:0000475!1.35e-10!200;UBERON:0000153!2.71e-10!94;UBERON:0000955!3.05e-10!50;UBERON:0006238!3.05e-10!50;UBERON:0007811!5.18e-10!86;UBERON:0002616!5.88e-10!49;UBERON:0003056!3.19e-09!49;UBERON:0002346!9.40e-09!71;UBERON:0003075!9.40e-09!71;UBERON:0007284!9.40e-09!71;UBERON:0001049!3.74e-08!52;UBERON:0005068!3.74e-08!52;UBERON:0006241!3.74e-08!52;UBERON:0007135!3.74e-08!52;UBERON:0003080!9.66e-08!40;UBERON:0002780!1.27e-07!39;UBERON:0001890!1.27e-07!39;UBERON:0006240!1.27e-07!39;UBERON:0007023!1.41e-07!51;UBERON:0002791!1.47e-07!29;UBERON:0003528!1.47e-07!29;UBERON:0001893!1.47e-07!29;UBERON:0000073!2.06e-07!75;UBERON:0001016!2.06e-07!75;UBERON:0000956!5.15e-07!21;UBERON:0001869!5.15e-07!21;UBERON:0000203!5.15e-07!21;UBERON:0001017!5.99e-07!73;UBERON:0005743!5.99e-07!73;UBERON:0002619!9.94e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.05e-11,95;UBERON:0000924,2.05e-11,95;UBERON:0006601,2.05e-11,95;UBERON:0010371,3.01e-11,73;UBERON:0000955,7.51e-10,47;UBERON:0006238,7.51e-10,47;UBERON:0002616,1.44e-09,46;UBERON:0003056,3.19e-09,49;UBERON:0002346,9.30e-09,64;UBERON:0003075,9.30e-09,64;UBERON:0007284,9.30e-09,64;UBERON:0000073,3.08e-08,54;UBERON:0001049,3.74e-08,52;UBERON:0005068,3.74e-08,52;UBERON:0006241,3.74e-08,52;UBERON:0007135,3.74e-08,52;UBERON:0003080,9.66e-08,40;UBERON:0002780,1.27e-07,39;UBERON:0001890,1.27e-07,39;UBERON:0006240,1.27e-07,39;UBERON:0007023,1.41e-07,51;UBERON:0003528,1.47e-07,29;UBERON:0002791,1.47e-07,29;UBERON:0001893,1.47e-07,29;UBERON:0001016,2.06e-07,75;UBERON:0000956,5.15e-07,21;UBERON:0001869,5.15e-07,21;UBERON:0000203,5.15e-07,21;UBERON:0001017,5.99e-07,73;UBERON:0002619,9.94e-07,17 | |||
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| ||
|short_description=p2@Kdsr | |short_description=p2@Kdsr | ||
}} | }} |
Latest revision as of 05:49, 26 September 2015
Short description: | p2@Kdsr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kdsr_5end |
Coexpression cluster: | MCL_coexpression_mm9:3220 |
Association with transcript: | 16bp_to_ENSMUST00000010049, NM_027534, uc007cgy.2_5end |
EntrezGene: | Kdsr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.05e-11 | 95 |
ectoderm | 2.05e-11 | 95 |
presumptive ectoderm | 2.05e-11 | 95 |
ecto-epithelium | 3.01e-11 | 73 |
brain | 7.51e-10 | 47 |
future brain | 7.51e-10 | 47 |
regional part of brain | 1.44e-09 | 46 |
pre-chordal neural plate | 3.19e-09 | 49 |
neurectoderm | 9.30e-09 | 64 |
neural plate | 9.30e-09 | 64 |
presumptive neural plate | 9.30e-09 | 64 |
regional part of nervous system | 3.08e-08 | 54 |
neural tube | 3.74e-08 | 52 |
neural rod | 3.74e-08 | 52 |
future spinal cord | 3.74e-08 | 52 |
neural keel | 3.74e-08 | 52 |
anterior neural tube | 9.66e-08 | 40 |
regional part of forebrain | 1.27e-07 | 39 |
forebrain | 1.27e-07 | 39 |
future forebrain | 1.27e-07 | 39 |
adult organism | 1.41e-07 | 51 |
brain grey matter | 1.47e-07 | 29 |
regional part of telencephalon | 1.47e-07 | 29 |
telencephalon | 1.47e-07 | 29 |
nervous system | 2.06e-07 | 75 |
cerebral cortex | 5.15e-07 | 21 |
cerebral hemisphere | 5.15e-07 | 21 |
pallium | 5.15e-07 | 21 |
central nervous system | 5.99e-07 | 73 |
regional part of cerebral cortex | 9.94e-07 | 17 |