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FFCP PHASE1:Mm9::chr5:91360115..91360138,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:91360115..91360138,+
|DHSsupport=NA
|short_description=p2@Mthfd2l
|DPIdataset=NA
|description=CAGE_peak_2_at_Mthfd2l_5end
|association_with_transcript=-83bp_to_ENSMUST00000071652,NM_026788,uc008ybo.1,uc008ybp.1_5end
|EntrezGene=665563
|EntrezGene=665563
|HGNC=
|HGNC=
|MCL_coexpression_id=108
|TSSclassifier=NA
|UniProt=D3YZG8
|UniProt=D3YZG8
|association_with_transcript=-83bp_to_ENSMUST00000071652,NM_026788,uc008ybo.1,uc008ybp.1_5end
|cluster_id=chr5:91360115..91360138,+
|description=CAGE_peak_2_at_Mthfd2l_5end
|id=chr5:91360115..91360138,+
|ontology_enrichment_celltype=CL:0000117!2.56e-09!23;CL:0000337!2.56e-09!23;CL:0000221!9.30e-09!44;CL:0000133!9.30e-09!44;CL:0002319!3.02e-08!43;CL:0000540!1.33e-07!33;CL:0000047!1.33e-07!33;CL:0000031!1.33e-07!33;CL:0000404!1.33e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.55e-10,23;CL:0000337,3.55e-10,23;CL:0000221,6.31e-07,44;CL:0000133,6.31e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.95e-13!71;UBERON:0003075!4.95e-13!71;UBERON:0007284!4.95e-13!71;UBERON:0003056!1.69e-12!49;UBERON:0001017!3.70e-12!73;UBERON:0005743!3.70e-12!73;UBERON:0004121!6.66e-12!102;UBERON:0000924!6.66e-12!102;UBERON:0006601!6.66e-12!102;UBERON:0000073!1.01e-11!75;UBERON:0001016!1.01e-11!75;UBERON:0000033!1.37e-11!63;UBERON:0001049!9.80e-11!52;UBERON:0005068!9.80e-11!52;UBERON:0006241!9.80e-11!52;UBERON:0007135!9.80e-11!52;UBERON:0003080!8.66e-10!40;UBERON:0002780!1.45e-09!39;UBERON:0001890!1.45e-09!39;UBERON:0006240!1.45e-09!39;UBERON:0002020!1.90e-09!34;UBERON:0000955!3.88e-09!50;UBERON:0006238!3.88e-09!50;UBERON:0002616!7.21e-09!49;UBERON:0002791!2.30e-07!29;UBERON:0003528!2.30e-07!29;UBERON:0001893!2.30e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.06e-12,49;UBERON:0002346,2.31e-11,64;UBERON:0003075,2.31e-11,64;UBERON:0007284,2.31e-11,64;UBERON:0010371,4.99e-10,73;UBERON:0002020,8.36e-10,34;UBERON:0001049,1.72e-09,52;UBERON:0005068,1.72e-09,52;UBERON:0006241,1.72e-09,52;UBERON:0007135,1.72e-09,52;UBERON:0000073,2.80e-09,54;UBERON:0003080,4.29e-09,40;UBERON:0001017,5.60e-09,73;UBERON:0004121,6.24e-09,95;UBERON:0000924,6.24e-09,95;UBERON:0006601,6.24e-09,95;UBERON:0002780,8.31e-09,39;UBERON:0001890,8.31e-09,39;UBERON:0006240,8.31e-09,39;UBERON:0001016,2.16e-08,75;UBERON:0000955,8.14e-08,47;UBERON:0006238,8.14e-08,47;UBERON:0002616,1.71e-07,46;UBERON:0003528,3.50e-07,29;UBERON:0002791,3.50e-07,29;UBERON:0001893,3.50e-07,29
|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.595745707205312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,2.34717403304412,0.872100625521786,2.63623419281366,1.55543919259427,0.139986421625363,1.43752564364972,0,0,0,0.771778308107841,0,0,7.08107613008592,6.34789175126439,3.80298842103708,1.0165335962074,1.77858959222228,0,0,0,1.19840044207362,1.53687322128622,2.59224030771194,3.78016627328734,2.3135745748652,2.57085885963423,3.09215957332259,3.1847607795888,2.68367318851062,3.67687514644008,1.10115880999389,0.638436690425939,0.46081959976873,7.78129097608144,6.49562269577109,4.68822033501084,0.558365998002762,1.68828783009504,0.45839474333043,2.06240009831567,2.70506193518296,4.10078780815661,0.454357159999104,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,4.3661460130771,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0.29688427812965,0.867426633830679,0.608930956624282,1.15307748628029,0.753613202763113,0.470354828542819,0.251333182659351,0.494389935468748,0.289198713839823,0,0.323533699894818,0,0,0,0.292780797011547,0,0,0.479260498023681,0.599902730993408,0.381210681219194,1.64769703345305,1.37250180845588,2.51308704225729,0.695297280769106,0.511430914660661,0.83115217823824,0.973447578406546,2.74966282395854,0.373220911830279,1.26361379216837,0.210441855886474,6.24578126220978,8.27647575960503,3.60124259610698,2.71268672104287,3.33378845841506,2.43416068541215,2.06143794031403,0.258703370739016,6.25147179505242,5.10586416453112,4.57472922826267,4.16471891612392,2.78047249225598,2.089512999133,1.23469281844766,4.37875387000685,0.702213187313235,0.257347907114715,0,0.621377317606506,1.64168241986767,0.540186184383045,0,0.787056926989615,0.154267112887378,0.232533944750408,0,0.350296027101508,0,0.492502392237286,0.243206428637567,0,0,0,0.841159794256509,2.98423375899925,0,0,3.83918850963421,2.78684006232526,1.03093969057675,1.00841762311671,0.444756087689741,0.760902504450237,0,0.494096864172033,0.251335208800269,0.596869416123452,0,0,0,0,3.41402221715547,2.39921876480431,3.38123207019241,2.64746726198909,3.10323979468201,1.96380295692892,1.3279672796094,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0.500535317148282,0,0.449724224769707,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,4.16881105895066,0.651859905768103,1.18821560042632,0.704070744865506,0,0.476087281772027,0.585400943573396,0.157635144106191,0.44292937929755,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.586058432961016,0.327869890753351,0,0.631016438832513,0.390438744296638,0.861693590931196,0.238968797952552,0.891194696329576,0.849229592366497,0,0,0.790575555893047,1.92792789853084,0.851640511249612,3.02711526234334,2.76907830901079,0.659880491890142,0,2.42780636154981,2.11626489875326,0.565815239267694,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0,0,0,0,6.84232157318979,3.36332577835162,4.28674070063185,2.83744373827638,3.21063871683727,2.30368628842969,0.608929898229199,0.23467170806371,0.63549621259146,0,0,0.645857706783622,0.120625849856312,0.238744688006273,0.656563598980245,0.582961673259701,0.370850604021019,0,0.82554747185289,0.370389054739423,0,0,0,0.849892149969277,0.839708713941948,0.829199842826543,0,3.79603192297362,2.64315307264903,1.29606408986162,0.627264888043406,0,0.404593039154462,0.0826534557253359,0,0,0,1.12738587736838,3.28936401296753,2.97825282822776,1.94451188344048,2.32487682259916,1.18269287843545,2.11243029562357,1.17183946359555,0.419437377702843,2.17425708743405,1.15212002503146,0,1.01362607645082,0.718976700153791,0.51968329191118,0.179026695667481,0.596044064343795,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0.194915761479505,0,0,0,0,0.269141569828427,0.335769232728157,0.19318959403219,0.750729901804728,0.36630324853453,0.428736758158132,0.501572104035363,1.12950368523413,0.460325236507177,1.71868654031819,1.89038500578056,1.37016503954128,0,0.675022500231806,1.80128481289688,1.81256963593682,1.03552062350364,4.98179268404048,5.98537310101547,2.73173769206615,2.67417388775123,3.35381060204772,2.02227859295016,0.888986911206461,2.06035057238894,1.92551525755089,2.52697211763797,0.760437899670719,2.64076877940507,2.71560371662659,1.79270426733634,1.66562859971278,1.90517476513229,0.927074607558844,1.92909220463705,1.23625770240992,1.91358596174717,1.37147700954166,1.24233064311536,1.43061713968393,2.18019624948493,2.25862512996793,1.77690676572521,2.37806364734604,1.57841826862706,1.35804113845862,0.561142271657738,2.01679530811096,1.28055827088233,1.22769312950907,2.78886314134739,0.385813221962283,2.24829520144151,0.935726433781634,0.644613162144895,0.57386499620653,0.441182838239031,0.695603506861264
|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.595745707205312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,2.34717403304412,0.872100625521786,2.63623419281366,1.55543919259427,0.139986421625363,1.43752564364972,0,0,0,0.771778308107841,0,0,7.08107613008592,6.34789175126439,3.80298842103708,1.0165335962074,1.77858959222228,0,0,0,1.19840044207362,1.53687322128622,2.59224030771194,3.78016627328734,2.3135745748652,2.57085885963423,3.09215957332259,3.1847607795888,2.68367318851062,3.67687514644008,1.10115880999389,0.638436690425939,0.46081959976873,7.78129097608144,6.49562269577109,4.68822033501084,0.558365998002762,1.68828783009504,0.45839474333043,2.06240009831567,2.70506193518296,4.10078780815661,0.454357159999104,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,4.3661460130771,0,0,0,0.216491041011214,0.253359865475099,0,0,0,0.29688427812965,0.867426633830679,0.608930956624282,1.15307748628029,0.753613202763113,0.470354828542819,0.251333182659351,0.494389935468748,0.289198713839823,0,0.323533699894818,0,0,0,0.292780797011547,0,0,0.479260498023681,0.599902730993408,0.381210681219194,1.64769703345305,1.37250180845588,2.51308704225729,0.695297280769106,0.511430914660661,0.83115217823824,0.973447578406546,2.74966282395854,0.373220911830279,1.26361379216837,0.210441855886474,6.24578126220978,8.27647575960503,3.60124259610698,2.71268672104287,3.33378845841506,2.43416068541215,2.06143794031403,0.258703370739016,6.25147179505242,5.10586416453112,4.57472922826267,4.16471891612392,2.78047249225598,2.089512999133,1.23469281844766,4.37875387000685,0.702213187313235,0.257347907114715,0,0.621377317606506,1.64168241986767,0.540186184383045,0,0.787056926989615,0.154267112887378,0.232533944750408,0,0.350296027101508,0,0.492502392237286,0.243206428637567,0,0,0,0.841159794256509,2.98423375899925,0,0,3.83918850963421,2.78684006232526,1.03093969057675,1.00841762311671,0.444756087689741,0.760902504450237,0,0.494096864172033,0.251335208800269,0.596869416123452,0,0,0,0,3.41402221715547,2.39921876480431,3.38123207019241,2.64746726198909,3.10323979468201,1.96380295692892,1.3279672796094,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0.500535317148282,0,0.449724224769707,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,4.16881105895066,0.651859905768103,1.18821560042632,0.704070744865506,0,0.476087281772027,0.585400943573396,0.157635144106191,0.44292937929755,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.586058432961016,0.327869890753351,0,0.631016438832513,0.390438744296638,0.861693590931196,0.238968797952552,0.891194696329576,0.849229592366497,0,0,0.790575555893047,1.92792789853084,0.851640511249612,3.02711526234334,2.76907830901079,0.659880491890142,0,2.42780636154981,2.11626489875326,0.565815239267694,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0,0,0,0,6.84232157318979,3.36332577835162,4.28674070063185,2.83744373827638,3.21063871683727,2.30368628842969,0.608929898229199,0.23467170806371,0.63549621259146,0,0,0.645857706783622,0.120625849856312,0.238744688006273,0.656563598980245,0.582961673259701,0.370850604021019,0,0.82554747185289,0.370389054739423,0,0,0,0.849892149969277,0.839708713941948,0.829199842826543,0,3.79603192297362,2.64315307264903,1.29606408986162,0.627264888043406,0,0.404593039154462,0.0826534557253359,0,0,0,1.12738587736838,3.28936401296753,2.97825282822776,1.94451188344048,2.32487682259916,1.18269287843545,2.11243029562357,1.17183946359555,0.419437377702843,2.17425708743405,1.15212002503146,0,1.01362607645082,0.718976700153791,0.51968329191118,0.179026695667481,0.596044064343795,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0.194915761479505,0,0,0,0,0.269141569828427,0.335769232728157,0.19318959403219,0.750729901804728,0.36630324853453,0.428736758158132,0.501572104035363,1.12950368523413,0.460325236507177,1.71868654031819,1.89038500578056,1.37016503954128,0,0.675022500231806,1.80128481289688,1.81256963593682,1.03552062350364,4.98179268404048,5.98537310101547,2.73173769206615,2.67417388775123,3.35381060204772,2.02227859295016,0.888986911206461,2.06035057238894,1.92551525755089,2.52697211763797,0.760437899670719,2.64076877940507,2.71560371662659,1.79270426733634,1.66562859971278,1.90517476513229,0.927074607558844,1.92909220463705,1.23625770240992,1.91358596174717,1.37147700954166,1.24233064311536,1.43061713968393,2.18019624948493,2.25862512996793,1.77690676572521,2.37806364734604,1.57841826862706,1.35804113845862,0.561142271657738,2.01679530811096,1.28055827088233,1.22769312950907,2.78886314134739,0.385813221962283,2.24829520144151,0.935726433781634,0.644613162144895,0.57386499620653,0.441182838239031,0.695603506861264
|short_description=p2@Mthfd2l
}}
}}

Latest revision as of 08:46, 26 September 2015

Short description:p2@Mthfd2l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Mthfd2l_5end
Coexpression cluster:MCL_coexpression_mm9:108
Association with transcript: -83bp_to_ENSMUST00000071652, NM_026788, uc008ybo.1, uc008ybp.1_5end
EntrezGene:Mthfd2l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Mthfd2l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.78
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C66.25
eyeball, embryo E14.CNhs10521.399-16E28.28
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C63.33
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E26.25
forelimb, embryo E12.CNhs10600.359-14H25.11
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I84.98
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.55e-1023
neuroblast (sensu Vertebrata)3.55e-1023
ectodermal cell6.31e-0744
neurectodermal cell6.31e-0744

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate3.06e-1249
neurectoderm2.31e-1164
neural plate2.31e-1164
presumptive neural plate2.31e-1164
ecto-epithelium4.99e-1073
gray matter8.36e-1034
neural tube1.72e-0952
neural rod1.72e-0952
future spinal cord1.72e-0952
neural keel1.72e-0952
regional part of nervous system2.80e-0954
anterior neural tube4.29e-0940
central nervous system5.60e-0973
ectoderm-derived structure6.24e-0995
ectoderm6.24e-0995
presumptive ectoderm6.24e-0995
regional part of forebrain8.31e-0939
forebrain8.31e-0939
future forebrain8.31e-0939
nervous system2.16e-0875
brain8.14e-0847
future brain8.14e-0847
regional part of brain1.71e-0746
brain grey matter3.50e-0729
regional part of telencephalon3.50e-0729
telencephalon3.50e-0729
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