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FFCP PHASE1:Mm9::chr12:113048151..113048185,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74335
|EntrezGene=74335
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=7bp_to_ENSMUST00000146491_5end
|association_with_transcript=7bp_to_ENSMUST00000146491_5end
|cluster_id=chr12:113048151..113048185,-
|description=CAGE_peak_2_at_Xrcc3_5end
|description=CAGE_peak_2_at_Xrcc3_5end
|id=chr12:113048151..113048185,-
|id=chr12:113048151..113048185,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.45e-11!102;UBERON:0000924!4.45e-11!102;UBERON:0006601!4.45e-11!102;UBERON:0000033!2.46e-10!63;UBERON:0002346!7.06e-10!71;UBERON:0003075!7.06e-10!71;UBERON:0007284!7.06e-10!71;UBERON:0001017!5.91e-09!73;UBERON:0005743!5.91e-09!73;UBERON:0001049!7.59e-09!52;UBERON:0005068!7.59e-09!52;UBERON:0006241!7.59e-09!52;UBERON:0007135!7.59e-09!52;UBERON:0000955!1.20e-08!50;UBERON:0006238!1.20e-08!50;UBERON:0000073!1.22e-08!75;UBERON:0001016!1.22e-08!75;UBERON:0002616!4.03e-08!49;UBERON:0003056!6.79e-07!49
|ontology_enrichment_uberon=UBERON:0004121!4.45e-11!102;UBERON:0000924!4.45e-11!102;UBERON:0006601!4.45e-11!102;UBERON:0000033!2.46e-10!63;UBERON:0002346!7.06e-10!71;UBERON:0003075!7.06e-10!71;UBERON:0007284!7.06e-10!71;UBERON:0001017!5.91e-09!73;UBERON:0005743!5.91e-09!73;UBERON:0001049!7.59e-09!52;UBERON:0005068!7.59e-09!52;UBERON:0006241!7.59e-09!52;UBERON:0007135!7.59e-09!52;UBERON:0000955!1.20e-08!50;UBERON:0006238!1.20e-08!50;UBERON:0000073!1.22e-08!75;UBERON:0001016!1.22e-08!75;UBERON:0002616!4.03e-08!49;UBERON:0003056!6.79e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.26e-14,54;UBERON:0002346,3.24e-13,64;UBERON:0003075,3.24e-13,64;UBERON:0007284,3.24e-13,64;UBERON:0001049,4.77e-13,52;UBERON:0005068,4.77e-13,52;UBERON:0006241,4.77e-13,52;UBERON:0007135,4.77e-13,52;UBERON:0004121,8.44e-13,95;UBERON:0000924,8.44e-13,95;UBERON:0006601,8.44e-13,95;UBERON:0010371,3.47e-12,73;UBERON:0001017,2.66e-11,73;UBERON:0000955,1.04e-10,47;UBERON:0006238,1.04e-10,47;UBERON:0001016,1.13e-10,75;UBERON:0002616,6.30e-10,46;UBERON:0002021,2.21e-09,10;UBERON:0000411,2.21e-09,10;UBERON:0001950,2.21e-09,10;UBERON:0002020,5.33e-09,34;UBERON:0003076,1.47e-08,12;UBERON:0003057,1.47e-08,12;UBERON:0003056,3.08e-08,49;UBERON:0003080,6.53e-07,40;UBERON:0003528,8.01e-07,29;UBERON:0002791,8.01e-07,29;UBERON:0001893,8.01e-07,29;UBERON:0010314,8.28e-07,92
|phase1_expression=0.160148847104794,0,0,0,0,0.503637815735669,0.934450562382103,0.129123323441576,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0,0.42438965179803,2.04103896362567,1.78723712161594,0.522399578277871,0,0.45881856213434,0,0,0.430942465371778,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.367093504323363,7.82391344348039,0,1.09843091367236,0,0.979904951377538,0,0,0,0,0,1.14613375975503,0.515672092277442,0.404632921719196,0,0,1.0165335962074,0.889294796111139,0,0,0,2.09720077362883,1.53687322128622,0,0.135005938331691,0.210324961351382,9.42648248532552,8.1721360152097,0.244981598429908,0,0,16.5173821499083,9.06580100404833,12.2885226604995,0,0.0914876436024097,0,15.355064945076,13.5063026407603,12.2238598221448,2.65165726926301,2.56269025438385,0.372798891650601,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.421333260395256,1.1930122580464,1.03914401841148,1.06001872353102,0.422530259330042,0,2.54805239706646,0,0,0,0,0.34255163915718,0.258937883647172,0.445326417194474,0,0.608930956624282,0,0,0.705532242814229,0.879666139307728,10.6293836125781,0.289198713839823,0,0.323533699894818,0.220841518460394,0.484875253135222,0,4.68449275218475,5.23616767033638,0.766371165625774,0,1.19980546198682,0.127070227073065,15.2786452192919,20.5875271268382,0.753926112677186,8.8650403298061,8.95004100656157,15.9996794310861,16.3863675698435,0.407357455401265,0.373220911830279,0.758168275301024,1.47309299120532,0.910843100738926,0.689706313300419,1.0803727788321,0.753524089178575,1.97305847538851,1.0249097622788,1.12442069471675,4.9153640440413,0,0,0,0,0.278047249225598,2.089512999133,2.26360350048738,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0,0,0,0.467061369468678,0,0.32833492815819,0.243206428637567,0,0.439100230582101,0,6.09840850835969,0.308713837137853,0,0,0,0,0.128867461322093,1.61346819698674,6.0042071838115,15.7887269673424,0.474529061544512,3.29397909448022,1.75934646160189,1.59165177632921,0.58489226135736,0.898819408654221,0.432276099749388,0,0,0,1.1270773567308,0.814605311381257,1.93952487167626,0.841629838683823,0.632365371242573,0,0.941992367048249,0.493588655687202,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0.327726629431476,0.518054945597687,0,0,0,0.491764273019036,0.275936746304732,21.9954308283275,20.74646852682,0,0,0.631016438832513,0.390438744296638,0.646270193198397,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.790575555893047,19.6006003017302,0.425820255624806,0.178065603667255,0.81443479676788,0.329940245945071,0,0.242780636154981,0.302323556964751,0.565815239267694,1.18120757152309,0,0.775284879504663,0.727067458955011,0.356497378384721,0.632073515871632,1.05418608574999,0,3.06395645178409,0.18006109403131,0.388076051348264,0,0.354680467284547,0.535106452806212,0.329098041204242,0.608929898229199,2.11204537257339,2.75381692122966,0.882113592219848,1.31909002353184,1.13025098687134,1.44751019827574,0.835606408021955,0.328281799490123,0.291480836629851,28.5554965096185,0.341741761595705,0.619160603889667,0,0.188368457004691,0,0,0.509935289981566,0.279902904647316,0.138199973804424,2.86401185404534,0,0.609958401380546,0.648032044930808,0.418176592028937,2.40198820120795,0.134864346384821,0.991841468704031,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0,0.352071715937262,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0.403865799792591,0.15241361331,0.504130925684203,0.38983152295901,0.192423683280659,0.116876902181569,2.26730383615211,0.221985953374065,0,0,0.19318959403219,0.93841237725591,0.183151624267265,0.643105137237198,0.501572104035363,3.3885110557024,6.44455331110048,2.29158205375759,2.57779773515531,3.42541259885321,2.2661816921691,2.70009000092722,4.05289082901798,4.07828168085784,2.5888015587591,0,0.399024873401031,0.170733605754134,0,0.628839487883947,1.83843508450014,0.888986911206461,2.06035057238894,1.60459604795908,2.02157769411038,0.760437899670719,2.07488975524684,1.591905626988,1.40855335290712,2.01024141344646,1.42888107384922,0.927074607558844,1.35036454324594,1.64834360321323,0.883193520806384,1.02860775715625,1.77475806159337,2.86123427936785,1.45346416632329,1.78807822789128,1.69229215783353,2.0122077016005,0.789209134313529,1.08643291076689,1.12228454331548,1.54225523561426,1.47756723563345,1.63692417267876,1.85924209423159,0.964533054905707,1.74867404556562,2.10538447600868,1.07435527024149,0.382576664137687,1.32354851471709,2.78241402744506
|phase1_expression=0.160148847104794,0,0,0,0,0.503637815735669,0.934450562382103,0.129123323441576,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0,0.42438965179803,2.04103896362567,1.78723712161594,0.522399578277871,0,0.45881856213434,0,0,0.430942465371778,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.367093504323363,7.82391344348039,0,1.09843091367236,0,0.979904951377538,0,0,0,0,0,1.14613375975503,0.515672092277442,0.404632921719196,0,0,1.0165335962074,0.889294796111139,0,0,0,2.09720077362883,1.53687322128622,0,0.135005938331691,0.210324961351382,9.42648248532552,8.1721360152097,0.244981598429908,0,0,16.5173821499083,9.06580100404833,12.2885226604995,0,0.0914876436024097,0,15.355064945076,13.5063026407603,12.2238598221448,2.65165726926301,2.56269025438385,0.372798891650601,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.421333260395256,1.1930122580464,1.03914401841148,1.06001872353102,0.422530259330042,0,2.54805239706646,0,0,0,0,0.34255163915718,0.258937883647172,0.445326417194474,0,0.608930956624282,0,0,0.705532242814229,0.879666139307728,10.6293836125781,0.289198713839823,0,0.323533699894818,0.220841518460394,0.484875253135222,0,4.68449275218475,5.23616767033638,0.766371165625774,0,1.19980546198682,0.127070227073065,15.2786452192919,20.5875271268382,0.753926112677186,8.8650403298061,8.95004100656157,15.9996794310861,16.3863675698435,0.407357455401265,0.373220911830279,0.758168275301024,1.47309299120532,0.910843100738926,0.689706313300419,1.0803727788321,0.753524089178575,1.97305847538851,1.0249097622788,1.12442069471675,4.9153640440413,0,0,0,0,0.278047249225598,2.089512999133,2.26360350048738,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0,0,0,0,0.467061369468678,0,0.32833492815819,0.243206428637567,0,0.439100230582101,0,6.09840850835969,0.308713837137853,0,0,0,0,0.128867461322093,1.61346819698674,6.0042071838115,15.7887269673424,0.474529061544512,3.29397909448022,1.75934646160189,1.59165177632921,0.58489226135736,0.898819408654221,0.432276099749388,0,0,0,1.1270773567308,0.814605311381257,1.93952487167626,0.841629838683823,0.632365371242573,0,0.941992367048249,0.493588655687202,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0.327726629431476,0.518054945597687,0,0,0,0.491764273019036,0.275936746304732,21.9954308283275,20.74646852682,0,0,0.631016438832513,0.390438744296638,0.646270193198397,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.790575555893047,19.6006003017302,0.425820255624806,0.178065603667255,0.81443479676788,0.329940245945071,0,0.242780636154981,0.302323556964751,0.565815239267694,1.18120757152309,0,0.775284879504663,0.727067458955011,0.356497378384721,0.632073515871632,1.05418608574999,0,3.06395645178409,0.18006109403131,0.388076051348264,0,0.354680467284547,0.535106452806212,0.329098041204242,0.608929898229199,2.11204537257339,2.75381692122966,0.882113592219848,1.31909002353184,1.13025098687134,1.44751019827574,0.835606408021955,0.328281799490123,0.291480836629851,28.5554965096185,0.341741761595705,0.619160603889667,0,0.188368457004691,0,0,0.509935289981566,0.279902904647316,0.138199973804424,2.86401185404534,0,0.609958401380546,0.648032044930808,0.418176592028937,2.40198820120795,0.134864346384821,0.991841468704031,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0,0.352071715937262,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0.403865799792591,0.15241361331,0.504130925684203,0.38983152295901,0.192423683280659,0.116876902181569,2.26730383615211,0.221985953374065,0,0,0.19318959403219,0.93841237725591,0.183151624267265,0.643105137237198,0.501572104035363,3.3885110557024,6.44455331110048,2.29158205375759,2.57779773515531,3.42541259885321,2.2661816921691,2.70009000092722,4.05289082901798,4.07828168085784,2.5888015587591,0,0.399024873401031,0.170733605754134,0,0.628839487883947,1.83843508450014,0.888986911206461,2.06035057238894,1.60459604795908,2.02157769411038,0.760437899670719,2.07488975524684,1.591905626988,1.40855335290712,2.01024141344646,1.42888107384922,0.927074607558844,1.35036454324594,1.64834360321323,0.883193520806384,1.02860775715625,1.77475806159337,2.86123427936785,1.45346416632329,1.78807822789128,1.69229215783353,2.0122077016005,0.789209134313529,1.08643291076689,1.12228454331548,1.54225523561426,1.47756723563345,1.63692417267876,1.85924209423159,0.964533054905707,1.74867404556562,2.10538447600868,1.07435527024149,0.382576664137687,1.32354851471709,2.78241402744506
|short_description=p2@Xrcc3
|short_description=p2@Xrcc3
}}
}}

Latest revision as of 08:54, 26 September 2015

Short description:p2@Xrcc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Xrcc3_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 7bp_to_ENSMUST00000146491_5end
EntrezGene:Xrcc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Xrcc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A810.63
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A415.28
corpus striatum, adult.CNhs10487.19-21D820.59
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D58.87
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F216.00
diencephalon, neonate N30.CNhs11201.1388-42B216.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.10
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F715.79
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C222.00
medulla oblongata, neonate N30.CNhs11200.1396-42A320.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I919.60
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C928.56
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.26e-1454
neurectoderm3.24e-1364
neural plate3.24e-1364
presumptive neural plate3.24e-1364
neural tube4.77e-1352
neural rod4.77e-1352
future spinal cord4.77e-1352
neural keel4.77e-1352
ectoderm-derived structure8.44e-1395
ectoderm8.44e-1395
presumptive ectoderm8.44e-1395
ecto-epithelium3.47e-1273
central nervous system2.66e-1173
brain1.04e-1047
future brain1.04e-1047
nervous system1.13e-1075
regional part of brain6.30e-1046
occipital lobe2.21e-0910
visual cortex2.21e-0910
neocortex2.21e-0910
gray matter5.33e-0934
posterior neural tube1.47e-0812
chordal neural plate1.47e-0812
pre-chordal neural plate3.08e-0849
anterior neural tube6.53e-0740
brain grey matter8.01e-0729
regional part of telencephalon8.01e-0729
telencephalon8.01e-0729
structure with developmental contribution from neural crest8.28e-0792
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