FFCP PHASE1:Mm9::chr10:81022331..81022340,+: Difference between revisions
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{{FFCP|EntrezGene=14797|HGNC=|UniProt=P63002,Q3TYD9,B7ZNK7|association_with_transcript=26bp_to_NM_010347,uc007gim.1,uc011xjj.1_5end|description=CAGE_peak_5_at_Aes_5end|id=chr10:81022331..81022340,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!2.11e-12!50;UBERON:0006238!2.11e-12!50;UBERON:0002616!4.73e-12!49;UBERON:0001049!3.22e-11!52;UBERON:0005068!3.22e-11!52;UBERON:0006241!3.22e-11!52;UBERON:0007135!3.22e-11!52;UBERON:0000025!4.33e-11!114;UBERON:0001017!1.87e-10!73;UBERON:0005743!1.87e-10!73;UBERON:0003080!1.91e-10!40;UBERON:0000033!2.59e-10!63;UBERON:0002780!4.77e-10!39;UBERON:0001890!4.77e-10!39;UBERON:0006240!4.77e-10!39;UBERON:0003056!2.29e-09!49;UBERON:0000073!2.48e-09!75;UBERON:0001016!2.48e-09!75;UBERON:0004111!4.28e-09!122;UBERON:0002346!6.75e-09!71;UBERON:0003075!6.75e-09!71;UBERON:0007284!6.75e-09!71;UBERON:0002020!2.46e-07!34;UBERON:0002791!4.56e-07!29;UBERON:0003528!4.56e-07!29;UBERON:0001893!4.56e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.70e-13,54;UBERON:0001049,1.20e-11,52;UBERON:0005068,1.20e-11,52;UBERON:0006241,1.20e-11,52;UBERON:0007135,1.20e-11,52;UBERON:0000955,2.15e-11,47;UBERON:0006238,2.15e-11,47;UBERON:0000025,4.07e-11,114;UBERON:0002616,4.87e-11,46;UBERON:0003080,1.25e-10,40;UBERON:0001017,2.09e-10,73;UBERON:0002780,3.23e-10,39;UBERON:0001890,3.23e-10,39;UBERON:0006240,3.23e-10,39;UBERON:0002346,1.80e-09,64;UBERON:0003075,1.80e-09,64;UBERON:0007284,1.80e-09,64;UBERON:0001016,2.04e-09,75;UBERON:0004111,2.07e-09,122;UBERON:0003056,2.17e-09,49;UBERON:0010314,1.52e-08,92;UBERON:0002020,2.02e-07,34;UBERON:0003528,3.88e-07,29;UBERON:0002791,3.88e-07,29;UBERON:0001893,3.88e-07,29|phase1_expression=1.92178616525753,0.697950815278722,2.72999543633722,0.60492842261366,2.00358291978539,1.17515490338323,0.233612640595526,0.774739940649458,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0.262261207256992,0.333109761815663,0,0,0,0.137114433605739,0,1.44573593256819,0.198581902401771,0,0.799962113967033,0.68822784320151,1.72269589234506,1.29228598847722,1.29282739611533,1.52018735565099,1.76421090831952,1.10865255327652,0.635030673459631,0.61506478758457,0,0.288851619751275,0.166234645358492,0,0.418531630736908,0.7813353445238,1.0470474879476,1.17646297606203,0,1.45653105909346,5.91715044485213,7.50189291024408,4.40512205188036,9.38869613217647,2.18025156380447,2.63623419281366,2.3331587888914,2.2397827460058,1.43752564364972,0.167782606057736,0,0,0.257259436035947,1.43266719969378,3.6097046459421,1.21389876515759,1.05798195854407,0.633831403506179,8.80995783379743,8.00365316500025,0.449949858640699,1.97773272513395,2.1314403448383,5.09320187881288,4.99483796918021,3.31806759387129,2.8351247049655,4.41682418837902,4.28476476605705,2.20868540951614,4.04219637409348,4.12135525378416,1.83843757322004,5.50579404996943,5.49055553766307,3.07213066512487,1.97829431595291,2.19570344645783,3.12548022334056,3.35019598801657,1.68828783009504,3.0559649555362,1.47314292736834,1.42371680799103,2.42319279572891,0.151452386666368,0.302286240427142,0.289864488701678,4.30211938490693,2.719885334831,6.47643829965381,4.54843492213368,8.96053774194671,2.24711072210803,4.26075806445144,7.79358013808606,4.94675404314476,1.54927761754349,2.56652954828636,0,7.11066703153331,0.432982082022428,0.760079596425296,0.505524445014783,3.9964357901671,0.517875767294343,1.1875371125186,2.60227990149204,1.82679286987285,0.922461989024234,2.11011696773672,0.940709657085638,2.38766523526383,0.741584903203122,1.44599356919912,0.884610551949874,1.7794353494215,0.441683036920787,0.484875253135222,0,0,1.25668024088073,0.766371165625774,0.359445373517761,1.19980546198682,0.127070227073065,3.74476598512057,3.20250421973039,1.7591609295801,4.51943232499919,5.11430914660661,3.1168206683934,3.89379031362618,2.03678727700633,0.497627882440372,0,0.631325567659422,2.99277018814219,2.29902104433473,4.14142898552303,2.10986744970001,1.7009124787832,0.768682321709099,1.78033276663485,0.258703370739016,1.07783996466421,2.83659120251729,2.28736461413134,2.84954452155847,1.66828349535359,2.43776516565517,2.46938563689532,2.7864797354589,0,0.772043721344145,0.568326998791185,2.69263504296152,1.87620847984877,2.52086886045421,1.89395788468168,2.16440654922144,2.62254091908543,1.39520366850245,1.3413670069981,1.98501082024188,2.13927804887525,0.656669856316381,1.86458261955468,1.46199987425332,1.3173006917463,1.8788898626452,4.41608891984667,1.9551876352064,2.64335026387038,0.793351699990633,1.70630600428187,1.85789337488351,3.73715637834071,4.63872106633688,6.89371935919098,3.61428689613862,1.42358718463353,2.63518327558417,1.50801125280162,2.58643413653496,2.14460495831032,2.69645822596266,2.37751854862164,1.39398891278057,1.70701110857774,1.14248512609729,2.25415471346161,1.83286195060783,1.74557238450863,1.26244475802573,0.632365371242573,0.590440591918409,1.255989822731,0.987177311374404,5.039694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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14797 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P63002,Q3TYD9,B7ZNK7 | |||
|association_with_transcript=26bp_to_NM_010347,uc007gim.1,uc011xjj.1_5end | |||
|cluster_id=chr10:81022331..81022340,+ | |||
|description=CAGE_peak_5_at_Aes_5end | |||
|id=chr10:81022331..81022340,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.11e-12!50;UBERON:0006238!2.11e-12!50;UBERON:0002616!4.73e-12!49;UBERON:0001049!3.22e-11!52;UBERON:0005068!3.22e-11!52;UBERON:0006241!3.22e-11!52;UBERON:0007135!3.22e-11!52;UBERON:0000025!4.33e-11!114;UBERON:0001017!1.87e-10!73;UBERON:0005743!1.87e-10!73;UBERON:0003080!1.91e-10!40;UBERON:0000033!2.59e-10!63;UBERON:0002780!4.77e-10!39;UBERON:0001890!4.77e-10!39;UBERON:0006240!4.77e-10!39;UBERON:0003056!2.29e-09!49;UBERON:0000073!2.48e-09!75;UBERON:0001016!2.48e-09!75;UBERON:0004111!4.28e-09!122;UBERON:0002346!6.75e-09!71;UBERON:0003075!6.75e-09!71;UBERON:0007284!6.75e-09!71;UBERON:0002020!2.46e-07!34;UBERON:0002791!4.56e-07!29;UBERON:0003528!4.56e-07!29;UBERON:0001893!4.56e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.70e-13,54;UBERON:0001049,1.20e-11,52;UBERON:0005068,1.20e-11,52;UBERON:0006241,1.20e-11,52;UBERON:0007135,1.20e-11,52;UBERON:0000955,2.15e-11,47;UBERON:0006238,2.15e-11,47;UBERON:0000025,4.07e-11,114;UBERON:0002616,4.87e-11,46;UBERON:0003080,1.25e-10,40;UBERON:0001017,2.09e-10,73;UBERON:0002780,3.23e-10,39;UBERON:0001890,3.23e-10,39;UBERON:0006240,3.23e-10,39;UBERON:0002346,1.80e-09,64;UBERON:0003075,1.80e-09,64;UBERON:0007284,1.80e-09,64;UBERON:0001016,2.04e-09,75;UBERON:0004111,2.07e-09,122;UBERON:0003056,2.17e-09,49;UBERON:0010314,1.52e-08,92;UBERON:0002020,2.02e-07,34;UBERON:0003528,3.88e-07,29;UBERON:0002791,3.88e-07,29;UBERON:0001893,3.88e-07,29 | |||
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| |||
|short_description=p5@Aes | |||
}} |
Latest revision as of 11:22, 26 September 2015
Short description: | p5@Aes |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Aes_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_NM_010347, uc007gim.1, uc011xjj.1_5end |
EntrezGene: | Aes |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 7.70e-13 | 54 |
neural tube | 1.20e-11 | 52 |
neural rod | 1.20e-11 | 52 |
future spinal cord | 1.20e-11 | 52 |
neural keel | 1.20e-11 | 52 |
brain | 2.15e-11 | 47 |
future brain | 2.15e-11 | 47 |
tube | 4.07e-11 | 114 |
regional part of brain | 4.87e-11 | 46 |
anterior neural tube | 1.25e-10 | 40 |
central nervous system | 2.09e-10 | 73 |
regional part of forebrain | 3.23e-10 | 39 |
forebrain | 3.23e-10 | 39 |
future forebrain | 3.23e-10 | 39 |
neurectoderm | 1.80e-09 | 64 |
neural plate | 1.80e-09 | 64 |
presumptive neural plate | 1.80e-09 | 64 |
nervous system | 2.04e-09 | 75 |
anatomical conduit | 2.07e-09 | 122 |
pre-chordal neural plate | 2.17e-09 | 49 |
structure with developmental contribution from neural crest | 1.52e-08 | 92 |
gray matter | 2.02e-07 | 34 |
brain grey matter | 3.88e-07 | 29 |
regional part of telencephalon | 3.88e-07 | 29 |
telencephalon | 3.88e-07 | 29 |