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FFCP PHASE1:Mm9::chr4:137882149..137882220,-: Difference between revisions

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{{FFCP|EntrezGene=68943|HGNC=|MCL_coexpression_id=1132|UniProt=A2AM78,Q99MQ3|association_with_transcript=0bp_to_ENSMUST00000105817,NM_026880,uc008vku.1,uc008vkv.1_5end|description=CAGE_peak_1_at_Pink1_5end|id=chr4:137882149..137882220,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!4.44e-13!122;UBERON:0000025!1.62e-11!114;UBERON:0000955!1.32e-10!50;UBERON:0006238!1.32e-10!50;UBERON:0001017!1.88e-10!73;UBERON:0005743!1.88e-10!73;UBERON:0000033!2.43e-10!63;UBERON:0002616!3.49e-10!49;UBERON:0001049!5.05e-10!52;UBERON:0005068!5.05e-10!52;UBERON:0006241!5.05e-10!52;UBERON:0007135!5.05e-10!52;UBERON:0004121!7.95e-10!102;UBERON:0000924!7.95e-10!102;UBERON:0006601!7.95e-10!102;UBERON:0000073!2.57e-09!75;UBERON:0001016!2.57e-09!75;UBERON:0007023!4.88e-09!51;UBERON:0002020!3.50e-08!34;UBERON:0000062!5.70e-08!269;UBERON:0002346!1.01e-07!71;UBERON:0003075!1.01e-07!71;UBERON:0007284!1.01e-07!71;UBERON:0002791!1.72e-07!29;UBERON:0003528!1.72e-07!29;UBERON:0001893!1.72e-07!29;UBERON:0000480!9.45e-07!308;UBERON:0000467!9.45e-07!308|ontology_enrichment_uberon_v019_2=UBERON:0004111,4.44e-13,122;UBERON:0000025,1.62e-11,114;UBERON:0000073,5.65e-11,54;UBERON:0001017,1.88e-10,73;UBERON:0001049,5.05e-10,52;UBERON:0005068,5.05e-10,52;UBERON:0006241,5.05e-10,52;UBERON:0007135,5.05e-10,52;UBERON:0004121,7.13e-10,95;UBERON:0000924,7.13e-10,95;UBERON:0006601,7.13e-10,95;UBERON:0010314,2.38e-09,92;UBERON:0001016,2.57e-09,75;UBERON:0000955,4.16e-09,47;UBERON:0006238,4.16e-09,47;UBERON:0007023,4.88e-09,51;UBERON:0002616,1.05e-08,46;UBERON:0002020,3.50e-08,34;UBERON:0010371,4.51e-08,73;UBERON:0002346,6.89e-08,64;UBERON:0003075,6.89e-08,64;UBERON:0007284,6.89e-08,64;UBERON:0003528,1.72e-07,29;UBERON:0002791,1.72e-07,29;UBERON:0001893,1.72e-07,29|phase1_expression=94.007373250514,202.05676102319,248.429584706687,244.693546947225,305.045499537325,68.3268636681392,61.4401244766233,39.8991069434471,21.6814632113567,11.4691617897777,8.21846247482424,3.66951931378547,63.1730693446149,35.055581370018,60.6259766504506,74.9158489342356,80.4496159847369,45.2688207289071,56.6282610791701,54.3218754301479,171.107099783952,43.3901456747869,31.8663742749501,73.4365220621737,76.852109157502,164.804573701011,125.78250287845,94.1609286837335,135.676721491851,121.226492414527,51.8849394933413,14.6057054895715,14.7615549020297,31.6963362030877,45.6385559207014,43.221007793208,44.3047503089341,139.789564666127,81.2588758304752,43.4524707498253,105.881667845583,93.5772314393071,70.8845115425484,63.451996259691,56.8724584141477,37.8106309453064,115.011527619162,114.899257412495,168.059929791871,190.541301092798,62.153971201661,113.564525848328,63.5896076958821,93.5717163194634,88.0565753753256,47.0784767945783,87.6792326212596,99.0090417172689,103.383711499254,103.682231937318,104.58218157852,47.7770790217476,39.1289710288901,92.6896708799841,95.9200371689965,88.0995342533164,205.226075705107,382.681432100268,57.4440452188966,70.3380938708108,64.1491132121715,170.533637689071,153.503635961371,70.4322095485986,58.4657373211242,74.4567217154117,441.564682807549,266.611161921872,292.927658919656,89.6826756565318,80.6921016573253,88.5552729946492,366.288094689812,340.471379069166,305.902092049174,107.244805112415,90.8331323498277,89.4717339961443,27.6400605666122,36.1987772911503,152.468721057083,217.687240876291,229.83031079322,240.707623470466,222.223534767103,201.612099193801,291.141282933122,24.8828270963964,28.5764605063156,22.9670723431721,87.4637636813186,32.0816193535795,53.5091003383956,56.8853362522665,30.9582188646036,29.1363845296363,32.8590889259609,197.423928034255,13.4647699496529,164.91921650102,34.523580026461,69.1136635768561,63.18864624816,73.8540938707851,110.88615082897,136.096918410039,119.395169415703,135.778796147797,180.460552597774,113.398561813134,165.410297326835,112.975933980507,100.651551057786,235.395760797284,256.572215846482,121.59755827929,62.7831252411022,44.3928020935122,51.2093015104451,357.999628177526,309.72790810821,125.0260803523,285.071885115333,300.465662363138,373.395116073529,263.642052485106,105.200062857377,149.412771702722,141.777467481292,211.28362331002,31.4891471969743,48.0495398265958,45.0155324513373,52.1438669711574,107.905887654006,82.5052358634433,113.191683268152,165.311453902231,29.9639510176651,29.6896545863476,35.1902248327898,47.1270824719286,41.1509928853885,48.058798980059,52.4744447840256,41.2000932314281,34.4084461783485,34.2272716462571,48.5919583966463,40.3895256444229,54.1755198556332,56.1793631758366,62.2638654589103,67.2933672576121,63.5580505095998,83.4796861653964,87.7254022576755,175.615074920223,117.495732838225,206.194334883344,348.839087475817,443.863161823309,342.059079623457,516.560505808671,258.656636733876,87.9834435842882,141.749657900049,37.8164310328868,21.9686898051291,26.0105072483691,20.4899263502128,31.6643133658648,37.5818894097831,55.7361084509798,100.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68943
|HGNC=
|MCL_coexpression_id=1132
|TSSclassifier=NA
|UniProt=A2AM78,Q99MQ3
|association_with_transcript=0bp_to_ENSMUST00000105817,NM_026880,uc008vku.1,uc008vkv.1_5end
|cluster_id=chr4:137882149..137882220,-
|description=CAGE_peak_1_at_Pink1_5end
|id=chr4:137882149..137882220,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004111,4.44e-13,122;UBERON:0000025,1.62e-11,114;UBERON:0000073,5.65e-11,54;UBERON:0001017,1.88e-10,73;UBERON:0001049,5.05e-10,52;UBERON:0005068,5.05e-10,52;UBERON:0006241,5.05e-10,52;UBERON:0007135,5.05e-10,52;UBERON:0004121,7.13e-10,95;UBERON:0000924,7.13e-10,95;UBERON:0006601,7.13e-10,95;UBERON:0010314,2.38e-09,92;UBERON:0001016,2.57e-09,75;UBERON:0000955,4.16e-09,47;UBERON:0006238,4.16e-09,47;UBERON:0007023,4.88e-09,51;UBERON:0002616,1.05e-08,46;UBERON:0002020,3.50e-08,34;UBERON:0010371,4.51e-08,73;UBERON:0002346,6.89e-08,64;UBERON:0003075,6.89e-08,64;UBERON:0007284,6.89e-08,64;UBERON:0003528,1.72e-07,29;UBERON:0002791,1.72e-07,29;UBERON:0001893,1.72e-07,29
|phase1_expression=94.007373250514,202.05676102319,248.429584706687,244.693546947225,305.045499537325,68.3268636681392,61.4401244766233,39.8991069434471,21.6814632113567,11.4691617897777,8.21846247482424,3.66951931378547,63.1730693446149,35.055581370018,60.6259766504506,74.9158489342356,80.4496159847369,45.2688207289071,56.6282610791701,54.3218754301479,171.107099783952,43.3901456747869,31.8663742749501,73.4365220621737,76.852109157502,164.804573701011,125.78250287845,94.1609286837335,135.676721491851,121.226492414527,51.8849394933413,14.6057054895715,14.7615549020297,31.6963362030877,45.6385559207014,43.221007793208,44.3047503089341,139.789564666127,81.2588758304752,43.4524707498253,105.881667845583,93.5772314393071,70.8845115425484,63.451996259691,56.8724584141477,37.8106309453064,115.011527619162,114.899257412495,168.059929791871,190.541301092798,62.153971201661,113.564525848328,63.5896076958821,93.5717163194634,88.0565753753256,47.0784767945783,87.6792326212596,99.0090417172689,103.383711499254,103.682231937318,104.58218157852,47.7770790217476,39.1289710288901,92.6896708799841,95.9200371689965,88.0995342533164,205.226075705107,382.681432100268,57.4440452188966,70.3380938708108,64.1491132121715,170.533637689071,153.503635961371,70.4322095485986,58.4657373211242,74.4567217154117,441.564682807549,266.611161921872,292.927658919656,89.6826756565318,80.6921016573253,88.5552729946492,366.288094689812,340.471379069166,305.902092049174,107.244805112415,90.8331323498277,89.4717339961443,27.6400605666122,36.1987772911503,152.468721057083,217.687240876291,229.83031079322,240.707623470466,222.223534767103,201.612099193801,291.141282933122,24.8828270963964,28.5764605063156,22.9670723431721,87.4637636813186,32.0816193535795,53.5091003383956,56.8853362522665,30.9582188646036,29.1363845296363,32.8590889259609,197.423928034255,13.4647699496529,164.91921650102,34.523580026461,69.1136635768561,63.18864624816,73.8540938707851,110.88615082897,136.096918410039,119.395169415703,135.778796147797,180.460552597774,113.398561813134,165.410297326835,112.975933980507,100.651551057786,235.395760797284,256.572215846482,121.59755827929,62.7831252411022,44.3928020935122,51.2093015104451,357.999628177526,309.72790810821,125.0260803523,285.071885115333,300.465662363138,373.395116073529,263.642052485106,105.200062857377,149.412771702722,141.777467481292,211.28362331002,31.4891471969743,48.0495398265958,45.0155324513373,52.1438669711574,107.905887654006,82.5052358634433,113.191683268152,165.311453902231,29.9639510176651,29.6896545863476,35.1902248327898,47.1270824719286,41.1509928853885,48.058798980059,52.4744447840256,41.2000932314281,34.4084461783485,34.2272716462571,48.5919583966463,40.3895256444229,54.1755198556332,56.1793631758366,62.2638654589103,67.2933672576121,63.5580505095998,83.4796861653964,87.7254022576755,175.615074920223,117.495732838225,206.194334883344,348.839087475817,443.863161823309,342.059079623457,516.560505808671,258.656636733876,87.9834435842882,141.749657900049,37.8164310328868,21.9686898051291,26.0105072483691,20.4899263502128,31.6643133658648,37.5818894097831,55.7361084509798,100.600161047436,109.689503846191,102.042094772909,127.332142106337,100.991397127704,99.7689543606186,85.8068058002536,149.953378760538,29.3985246477277,31.8753350181143,41.7018621990398,41.7485222082894,55.8583163042762,96.2964807094074,96.5621921887409,157.057197450297,133.448918665169,207.800824044312,235.383385907196,18.8534969459186,28.6976132865276,33.7293168577281,48.6864291332407,53.782506624789,79.1886399040216,74.2256034623091,152.569248395308,88.1342136333742,97.7623804386011,191.280447101611,188.470754561195,183.877423145497,166.839594575378,258.107283929401,138.564892624954,24.633883530163,24.93364139563,25.292017780503,26.7546883048892,48.7443209155684,86.885928923395,149.082106963358,79.7633829177326,96.5586046868659,86.5839393810155,131.582241716738,92.7318352619859,145.806251050164,55.7927750575307,21.7562273527484,89.0093334164456,102.372532879056,431.238884707209,337.452445698953,31.1476396215683,528.926592493161,45.433183595941,38.2629969410706,63.1190555357101,48.032728388463,64.3888168098119,59.162994934866,58.2927410411848,71.6026851882714,74.7093900318929,219.783780432516,71.2539227745508,73.5410943145764,104.573427904996,79.5155992727621,136.727492490162,39.330463057107,37.4881210636291,46.7740597794627,62.8993031836046,59.0275484052341,103.371317267288,78.1597518376637,76.6469363527151,103.027983087076,141.260935490498,135.107561655125,115.06858674478,29.3499583271036,40.2305506564366,46.0824625317923,44.6897388778529,57.4347592678667,70.9206278795141,183.287899366989,81.6657544061712,134.937029140253,127.465414075768,113.771514529621,106.405057192602,50.3612923150101,89.6486303463555,79.1159136771195,118.924181344979,431.670103080467,58.7795829944613,55.1052937461804,36.6685164192029,74.0288036028436,49.4833104350111,67.0320047495111,93.6581149266143,80.0522307291324,103.511780379513,63.9629314070126,24.9905434929097,22.7717803182071,28.2973992953119,31.5723326981848,43.6725127492355,51.922773358156,82.4054953581599,72.5063959295762,104.988128366352,172.732329038165,425.588168706564,48.2938443722052,53.2776339271854,56.7797469964619,69.4879850310193,69.7788798276914,111.489376713466,76.6903826730866,61.1329978001894,171.041557544812,234.168395087645,70.1544687794556,36.8959891828099,37.2840774508323,34.8187805580491,31.3296717418093,42.9151726327532,54.9293204306258,39.4331037556121,40.0836806294146,68.8909532161199,48.1949164954098,56.6230287097962,57.0536220927154,88.7095687558108,406.981038589304,14.6510729226883,12.829081495155,25.8542309200681,114.175050073025,73.9468953277657,67.7661009788881,60.2375145212175,158.99835697921,149.659238293523,176.764890818756,167.285489924304,211.894973829767,320.618619252661,330.107133159299,282.834427597127,308.470024208591,299.527132338559,312.727228298099,29.0604573235695,26.3356416444681,40.6345981694839,39.3832881650636,52.1936774943676,73.7212468884557,61.5623436010474,69.6398493467462,64.8256803375467,58.1203587056734,59.8211147740966,64.321582412652,57.2149610640982,55.3177316778071,53.3001151908091,61.4418861755165,56.6674353870343,56.1365831549382,56.455768410053,56.3771864114742,65.8308964579998,56.25983055251,52.6943979783579,60.609455735681,58.2537064770897,58.6379232689318,61.8296548309971,39.9865961385521,50.5191303506606,58.3587962524048,63.2324646601848,60.9742745904738,56.4738839574171,62.2846101567583,58.0648899053236,87.933323434157,69.2437560998409,126.129308726351,159.725757277484,168.31125278819,138.193230029771
|short_description=p1@Pink1
}}

Latest revision as of 14:09, 26 September 2015

Short description:p1@Pink1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pink1_5end
Coexpression cluster:MCL_coexpression_mm9:1132
Association with transcript: 0bp_to_ENSMUST00000105817, NM_026880, uc008vku.1, uc008vkv.1_5end
EntrezGene:Pink1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pink1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G794.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5202.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6248.43
CD326+ enterocyte, pool1.CNhs13542.11848-124I3244.69
CD326+ enterocyte, pool2.CNhs13197.11849-124I4305.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I768.33
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I861.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E939.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.22
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.67
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E463.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E835.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A160.63
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A374.92
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A580.45
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A245.27
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A456.63
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A654.32
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3171.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H243.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I931.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D173.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D276.85
GP2+ M cell, pool1.CNhs13228.11845-124H9164.80
GP2+ M cell, pool2.CNhs13231.11846-124I1125.78
GP2+ M cell, pool3.CNhs13240.11847-124I294.16
Ileum epithelium, pool1.CNhs13199.10252-104B9135.68
Ileum epithelium, pool2.CNhs13232.10253-104C1121.23
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C851.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I314.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F545.64
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F643.22
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F744.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8139.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H181.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H343.45
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9105.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H293.58
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H470.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D863.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D956.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B337.81
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7115.01
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2114.90
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8168.06
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3190.54
Mouse Astrocytes, donor2.CNhs12078.11552-120C462.15
Mouse Astrocytes, donor3.CNhs12107.11633-122C4113.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A263.59
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I993.57
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A188.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C147.08
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E187.68
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C599.01
Mouse Granule cells, donor1.CNhs12131.11713-123C3103.38
Mouse Granule cells, donor2.CNhs12357.11731-123E3103.68
Mouse Granule cells, donor3.CNhs12108.11636-122C7104.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C647.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D139.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C792.69
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E795.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D288.10
Mouse Microglia, donor1.CNhs12629.11718-123C8205.23
Mouse Microglia, donor2.CNhs12634.11736-123E8382.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D557.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F570.34
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D964.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1170.53
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5153.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D270.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F258.47
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D674.46
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3441.56
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3266.61
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7292.93
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D489.68
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F480.69
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D888.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4366.29
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5340.47
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6305.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6107.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F690.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E189.47
Mouse Schwann, donor1.CNhs12507.11728-123D927.64
Mouse Schwann, donor2.CNhs12573.11746-123F936.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3152.47
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7217.69
Mouse hepatocyte, donor1.CNhs13078.11714-123C4229.83
Mouse hepatocyte, donor3.CNhs12615.11637-122C8240.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F4222.22
Mouse hepatocyte, donor8.CNhs13091.11824-124F6201.61
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7291.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E328.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.97
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G687.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H132.08
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I853.51
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G130.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G229.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G332.86
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6197.42
accessory axillary lymph node, adult.CNhs10475.1063-29H913.46
adrenal gland, adult.CNhs10508.49-24D7164.92
adrenal gland, embryo E14.CNhs11038.406-44C534.52
adrenal gland, embryo E16.CNhs11004.1254-43D669.11
adrenal gland, embryo E17.CNhs11043.1263-45I163.19
adrenal gland, embryo E18.CNhs11026.1262-18F573.85
adrenal gland, neonate N00.CNhs11191.1311-23C1110.89
adrenal gland, neonate N25.CNhs11223.1377-27I3136.10
amnion, adult pregnant day17.5.CNhs10488.583-22A8119.40
aorta, adult.CNhs10498.46-23H1135.78
bone (os femoris), adult.CNhs10483.56-12G2180.46
bone (os femoris), neonate N02.CNhs11227.1985-43F5113.40
bone (os femoris), neonate N16.CNhs11225.1525-43A6165.41
bone (os femoris), neonate N20.CNhs11195.1350-25C3112.98
cecum, adult.CNhs10467.37-13H4100.65
cerebellum, adult.CNhs10494.15-8B2235.40
cerebellum, neonate N30.CNhs11135.1395-42I2256.57
colon, adult.CNhs10468.36-18H7121.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C762.78
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D144.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D451.21
corpora quadrigemina, adult.CNhs10501.16-22A4358.00
corpus striatum, adult.CNhs10487.19-21D8309.73
corpus striatum, neonate N00.CNhs11226.630-43F1125.03
cortex, adult.CNhs10473.12-14D5285.07
cortex, neonate N30.CNhs11107.1392-42F2300.47
diencephalon, adult.CNhs10482.20-12F2373.40
diencephalon, neonate N30.CNhs11201.1388-42B2263.64
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1105.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2149.41
epididymis, adult.CNhs10490.58-23B2141.78
eyeball, adult.CNhs10484.31-12G4211.28
eyeball, embryo E12.CNhs11016.345-16C631.49
eyeball, embryo E14.CNhs10521.399-16E248.05
eyeball, embryo E15.CNhs10593.426-16C945.02
eyeball, embryo E17.CNhs11023.1261-18D452.14
eyeball, neonate N00.CNhs11207.633-15C6107.91
eyeball, neonate N01.CNhs11140.1532-43E782.51
eyeball, neonate N02.CNhs11205.1551-44G8113.19
eyeball, neonate N16.CNhs11188.777-19A2165.31
forelimb, embryo E11.CNhs10596.335-25E229.96
forelimb, embryo E12.CNhs10600.359-14H229.69
forelimb, embryo E13.CNhs10589.384-1E235.19
forelimb, embryo E14.CNhs10577.413-26A847.13
forelimb, embryo E15.CNhs11007.437-20E741.15
forelimb, embryo E17.CNhs10598.1517-43C448.06
forelimb, embryo E18.CNhs11008.1520-43B552.47
gonad, embryo E13.CNhs11044.1564-45I641.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C834.41
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D234.23
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D548.59
heart, embryo E11.CNhs10586.331-24E940.39
heart, embryo E12.CNhs11015.353-12F554.18
heart, embryo E13.CNhs11013.376-3I956.18
heart, embryo E14.CNhs10597.403-26D462.26
heart, embryo E15.CNhs11017.431-16C867.29
heart, embryo E16.CNhs11021.457-17C663.56
heart, embryo E17.CNhs11025.479-18E583.48
heart, embryo E18.CNhs11030.1283-20G387.73
heart, neonate N00.CNhs11213.639-21E3175.62
heart, neonate N03.CNhs11221.1349-25I2117.50
heart, neonate N10.CNhs11118.749-24G1206.19
heart, neonate N16.CNhs11209.782-15G1348.84
heart, neonate N20.CNhs11127.821-26I6443.86
heart, neonate N25.CNhs11196.1351-25D3342.06
heart, neonate N30.CNhs11202.1390-42D2516.56
hippocampus, adult.CNhs10478.13-16E8258.66
hippocampus, neonate N00.CNhs11228.627-43G187.98
intestinal mucosa, adult.CNhs10506.860-29I3141.75
intestine, adult.CNhs10496.178-9A337.82
intestine, embryo E12.CNhs11019.1251-16I521.97
intestine, embryo E13.CNhs11010.381-16D526.01
intestine, embryo E15.CNhs10602.976-16D820.49
intestine, embryo E16.CNhs10585.463-22H431.66
intestine, embryo E17.CNhs10582.482-18D337.58
intestine, embryo E18.CNhs10526.1289-20F755.74
intestine, neonate N00.CNhs11126.644-26D1100.60
intestine, neonate N01.CNhs11192.1322-23E9109.69
intestine, neonate N06.CNhs11102.688-20B8102.04
intestine, neonate N07.CNhs11095.720-20F2127.33
intestine, neonate N10.CNhs11098.755-23A5100.99
intestine, neonate N20.CNhs11187.827-18D199.77
intestine, neonate N25.CNhs11121.1352-25E385.81
intestine, neonate N30.CNhs11131.1384-42G1149.95
kidney, embryo E14.CNhs10606.411-4I929.40
kidney, embryo E15.CNhs10997.434-16F831.88
kidney, embryo E16.CNhs10584.464-22A541.70
kidney, embryo E17.CNhs11028.483-18I241.75
kidney, embryo E18.CNhs11001.1288-20C755.86
kidney, neonate N00.CNhs11214.646-21G796.30
kidney, neonate N10.CNhs11206.758-6D596.56
kidney, neonate N20.CNhs11113.832-19I1157.06
kidney, neonate N25.CNhs11122.1353-25F3133.45
kidney, neonate N30.CNhs11203.1385-42H1207.80
liver, adult pregnant day01.CNhs10466.508-5B2235.38
liver, embryo E12.CNhs10601.355-15F818.85
liver, embryo E13.CNhs10524.378-3H628.70
liver, embryo E14.CNhs10594.409-16E133.73
liver, embryo E15.CNhs10520.433-16D748.69
liver, embryo E16.CNhs10523.462-17F553.78
liver, embryo E17.CNhs10510.481-18A379.19
liver, embryo E18.CNhs10579.499-43G474.23
liver, neonate N00.CNhs11117.641-24F4152.57
liver, neonate N03.CNhs11123.1345-25G288.13
liver, neonate N06.CNhs11101.684-20A897.76
liver, neonate N07.CNhs11103.716-20H2191.28
liver, neonate N10.CNhs11115.751-24B9188.47
liver, neonate N20.CNhs11220.823-25A3183.88
liver, neonate N25.CNhs11198.1368-26H1166.84
liver, neonate N30.CNhs11106.1382-42D1258.11
lung, adult.CNhs10474.28-22B1138.56
lung, embryo E12.CNhs10522.354-16G224.63
lung, embryo E14.CNhs10604.404-26F824.93
lung, embryo E15.CNhs11020.432-17C525.29
lung, embryo E16.CNhs10998.458-17B626.75
lung, embryo E17.CNhs10605.480-44A648.74
lung, embryo E18.CNhs10583.1287-20I686.89
lung, neonate N00.CNhs11224.640-42C6149.08
lung, neonate N06.CNhs11212.683-20E579.76
lung, neonate N07.CNhs11111.715-19A396.56
lung, neonate N10.CNhs11219.750-23E686.58
lung, neonate N20.CNhs11109.822-18A4131.58
lung, neonate N25.CNhs11119.1359-25C792.73
lung, neonate N30.CNhs11133.1394-42H2145.81
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A155.79
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.76
mammary gland, adult lactating day02.CNhs10480.595-22B689.01
mammary gland, adult pregnant day19.CNhs10476.588-5H2102.37
medulla oblongata, adult.CNhs10477.17-12C2431.24
medulla oblongata, neonate N30.CNhs11200.1396-42A3337.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C731.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2528.93
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E145.43
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E238.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E363.12
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D748.03
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D864.39
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D959.16
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D458.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D571.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D674.71
olfactory brain, adult.CNhs10489.18-22I9219.78
ovary, adult.CNhs10507.91-2I771.25
ovary, embryo E18.CNhs11040.505-44H773.54
ovary, neonate N00.CNhs11217.1299-22I4104.57
oviduct, adult pregnant day01.CNhs10500.988-6G679.52
pancreas, adult.CNhs10486.34-16E4136.73
pancreas, embryo E14.CNhs11012.405-44F439.33
pancreas, embryo E15.CNhs11042.1556-45F237.49
pancreas, embryo E16.CNhs11003.460-26E546.77
pancreas, embryo E17.CNhs10599.1558-45G362.90
pancreas, embryo E18.CNhs10580.1535-43I759.03
pancreas, neonate N00.CNhs11105.645-26G9103.37
pancreas, neonate N01.CNhs11138.1531-43D778.16
pancreas, neonate N02.CNhs11139.1539-43D876.65
pancreas, neonate N16.CNhs11136.787-43B6103.03
pancreas, neonate N25.CNhs11094.1555-45E2141.26
pancreas, neonate N30.CNhs11182.1548-44H5135.11
pituitary gland, adult.CNhs10493.21-1G8115.07
pituitary gland, embryo E12.CNhs11018.346-16E629.35
pituitary gland, embryo E13.CNhs11009.370-44C740.23
pituitary gland, embryo E14.CNhs11037.398-44A546.08
pituitary gland, embryo E15.CNhs10592.427-16B944.69
pituitary gland, embryo E16.CNhs11036.449-43F657.43
pituitary gland, embryo E17.CNhs11039.1265-44F570.92
pituitary gland, neonate N00.CNhs11190.1308-22E9183.29
placenta, adult pregnant day10.CNhs10472.539-13I781.67
placenta, adult pregnant day17.CNhs10464.577-18G3134.94
prostate, adult.CNhs10470.859-1F8127.47
skin, adult.CNhs10492.30-1C3113.77
skin, neonate N00.CNhs11124.650-25G4106.41
skin, neonate N03.CNhs11215.662-22H350.36
skin, neonate N06.CNhs11097.693-20I589.65
skin, neonate N10.CNhs11108.762-6C479.12
small intestine, neonate N16.CNhs11114.790-21I1118.92
spinal cord, adult.CNhs10505.24-13C9431.67
spleen, adult.CNhs10465.25-2G258.78
spleen, embryo E16.CNhs11035.461-43C155.11
spleen, embryo E18.CNhs11011.1271-21F236.67
spleen, neonate N10.CNhs11116.752-24D174.03
spleen, neonate N20.CNhs11112.824-19H149.48
spleen, neonate N25.CNhs11099.1354-25G367.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C693.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C980.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3103.51
stomach, adult.CNhs10503.33-1H663.96
stomach, embryo E12.CNhs10588.356-43E324.99
stomach, embryo E15.CNhs10603.1252-16G822.77
stomach, embryo E16.CNhs11022.459-17D428.30
stomach, embryo E17.CNhs11006.1035-18D531.57
stomach, embryo E18.CNhs10999.1286-20C643.67
stomach, neonate N03.CNhs11193.1340-24B851.92
stomach, neonate N07.CNhs11210.718-18A982.41
stomach, neonate N25.CNhs11104.1355-25E472.51
stomach, neonate N30.CNhs11134.1386-42I1104.99
submandibular gland, adult.CNhs10469.59-29C1172.73
testis, adult.CNhs10504.57-7G5425.59
testis, embryo E13.CNhs11031.389-23F548.29
testis, embryo E15.CNhs11034.443-27C553.28
testis, embryo E16.CNhs11033.470-26G556.78
testis, embryo E17.CNhs11029.486-18I569.49
testis, embryo E18.CNhs11027.503-18G569.78
testis, neonate N00.CNhs11189.1300-22B7111.49
testis, neonate N07.CNhs11222.726-26I476.69
testis, neonate N10.CNhs11204.763-44D961.13
testis, neonate N20.CNhs11110.839-18H3171.04
testis, neonate N30.CNhs11130.1391-42E2234.17
thymus, adult.CNhs10471.38-12B570.15
thymus, embryo E14.CNhs11041.402-44I436.90
thymus, embryo E15.CNhs11005.430-45I237.28
thymus, embryo E16.CNhs11002.456-26C534.82
thymus, embryo E17.CNhs10581.478-18C131.33
thymus, embryo E18.CNhs10595.1273-19G442.92
thymus, neonate N02.CNhs11181.1541-43F854.93
thymus, neonate N03.CNhs11137.2104-43C739.43
thymus, neonate N06.CNhs11197.681-26C440.08
thymus, neonate N07.CNhs11211.713-19D368.89
thymus, neonate N10.CNhs11194.748-24E448.19
thymus, neonate N20.CNhs11186.820-7A256.62
thymus, neonate N25.CNhs11125.1362-25G757.05
thymus, neonate N30.CNhs11132.1393-42G288.71
tongue, adult.CNhs10499.32-1B4406.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H314.65
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.83
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G525.85
urinary bladder, adult.CNhs10481.879-12E4114.18
uterus, adult pregnant day19.CNhs10497.590-15F573.95
uterus, adult.CNhs10509.92-27E567.77
vagina, adult.CNhs10502.89-27D560.24
vesicular gland, adult.CNhs10491.51-27F8159.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1149.66
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2176.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3167.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7211.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4320.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5330.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6282.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7308.47
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8299.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9312.73
whole body, embryo E11.CNhs11014.324-5I829.06
whole body, embryo E12.CNhs10587.857-27C926.34
whole body, embryo E13.CNhs10512.372-23H240.63
whole body, embryo E14.5.CNhs10578.420-27D239.38
whole body, embryo E14.CNhs10519.395-14B152.19
whole body, embryo E16.CNhs10514.453-14F273.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G561.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G569.64
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G564.83
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G558.12
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G559.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G564.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G557.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G555.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G553.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G561.44
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G556.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G556.14
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G556.46
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G556.38
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G565.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G556.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G552.69
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G560.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G558.25
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G558.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G561.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G539.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G550.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G558.36
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G563.23
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G560.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G556.47
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G562.28
whole body, embryo E17.5.CNhs10513.490-9F958.06
whole body, embryo E17.CNhs10517.475-3I587.93
whole body, embryo E18.CNhs10516.493-3B369.24
whole body, neonate N00.CNhs10525.657-19C2126.13
whole body, neonate N01.CNhs10576.659-23C6159.73
whole body, neonate N06.CNhs10515.692-21D1168.31
whole body, neonate N10.CNhs10518.761-6B4138.19





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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