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FFCP PHASE1:Mm9::chr15:12669625..12669661,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68070
|EntrezGene=68070
|HGNC=
|HGNC=
|MCL_coexpression_id=2963
|MCL_coexpression_id=2963
|TSSclassifier=NA
|UniProt=E9Q378,Q3TXZ4
|UniProt=E9Q378,Q3TXZ4
|association_with_transcript=17bp_to_ENSMUST00000096893,ENSMUST00000169509,uc007vhu.1_5end
|association_with_transcript=17bp_to_ENSMUST00000096893,ENSMUST00000169509,uc007vhu.1_5end
|cluster_id=chr15:12669625..12669661,-
|description=CAGE_peak_1_at_Pdzd2_5end
|description=CAGE_peak_1_at_Pdzd2_5end
|id=chr15:12669625..12669661,-
|id=chr15:12669625..12669661,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!3.25e-10!333;UBERON:0002020!3.55e-08!34;UBERON:0003056!3.82e-08!49;UBERON:0001049!1.03e-07!52;UBERON:0005068!1.03e-07!52;UBERON:0006241!1.03e-07!52;UBERON:0007135!1.03e-07!52;UBERON:0002021!1.18e-07!10;UBERON:0000411!1.18e-07!10;UBERON:0001950!1.18e-07!10;UBERON:0000033!2.11e-07!63;UBERON:0003080!3.00e-07!40;UBERON:0002780!5.04e-07!39;UBERON:0001890!5.04e-07!39;UBERON:0006240!5.04e-07!39;UBERON:0003103!5.39e-07!43;UBERON:0007100!8.22e-07!18;UBERON:0000948!8.22e-07!18;UBERON:0005498!8.22e-07!18;UBERON:0004140!8.22e-07!18;UBERON:0009881!8.22e-07!18;UBERON:0004141!8.22e-07!18;UBERON:0003084!8.22e-07!18;UBERON:0007005!8.22e-07!18;UBERON:0004139!8.22e-07!18;UBERON:0004291!8.22e-07!18
|ontology_enrichment_uberon=UBERON:0000468!3.25e-10!333;UBERON:0002020!3.55e-08!34;UBERON:0003056!3.82e-08!49;UBERON:0001049!1.03e-07!52;UBERON:0005068!1.03e-07!52;UBERON:0006241!1.03e-07!52;UBERON:0007135!1.03e-07!52;UBERON:0002021!1.18e-07!10;UBERON:0000411!1.18e-07!10;UBERON:0001950!1.18e-07!10;UBERON:0000033!2.11e-07!63;UBERON:0003080!3.00e-07!40;UBERON:0002780!5.04e-07!39;UBERON:0001890!5.04e-07!39;UBERON:0006240!5.04e-07!39;UBERON:0003103!5.39e-07!43;UBERON:0007100!8.22e-07!18;UBERON:0000948!8.22e-07!18;UBERON:0005498!8.22e-07!18;UBERON:0004140!8.22e-07!18;UBERON:0009881!8.22e-07!18;UBERON:0004141!8.22e-07!18;UBERON:0003084!8.22e-07!18;UBERON:0007005!8.22e-07!18;UBERON:0004139!8.22e-07!18;UBERON:0004291!8.22e-07!18
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.17e-12,92;UBERON:0010371,9.65e-09,73;UBERON:0002020,1.92e-08,34;UBERON:0003056,2.07e-08,49;UBERON:0000073,6.06e-08,54;UBERON:0002021,6.66e-08,10;UBERON:0000411,6.66e-08,10;UBERON:0001950,6.66e-08,10;UBERON:0001049,7.67e-08,52;UBERON:0005068,7.67e-08,52;UBERON:0006241,7.67e-08,52;UBERON:0007135,7.67e-08,52;UBERON:0003103,1.47e-07,43;UBERON:0002346,1.70e-07,64;UBERON:0003075,1.70e-07,64;UBERON:0007284,1.70e-07,64;UBERON:0003080,1.76e-07,40;UBERON:0002780,3.02e-07,39;UBERON:0001890,3.02e-07,39;UBERON:0006240,3.02e-07,39;UBERON:0007100,3.77e-07,18;UBERON:0000948,3.77e-07,18;UBERON:0005498,3.77e-07,18;UBERON:0004140,3.77e-07,18;UBERON:0009881,3.77e-07,18;UBERON:0004141,3.77e-07,18;UBERON:0003084,3.77e-07,18;UBERON:0007005,3.77e-07,18;UBERON:0004139,3.77e-07,18;UBERON:0004291,3.77e-07,18;UBERON:0004111,9.73e-07,122
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,6.97354979238772,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0.683045484958446,0,0.125896817975577,0.101376931219515,0,0,2.39827672018491,2.85592037554813,1.36100929351998,2.09979632438044,2.87505128729943,0.167782606057736,0,0,0,2.0057340795713,9.28209766099396,5.26022798234954,5.81890077199236,3.80298842103708,0,0,0,0,0,0.599200221036809,2.68952813725088,4.25127410464758,4.59020190327748,3.15487442027073,17.1390590642282,17.4486147351775,1.5923803897944,1.43768206527355,5.51531271966013,5.50579404996943,3.95830748064082,4.45458946443106,1.97829431595291,2.47016637726506,2.08365348222704,3.35019598801657,6.75315132038016,5.80633341551878,16.4992007865254,16.5151149726959,6.71038004971082,0.302904773332736,0.226714680320357,0.289864488701678,0,0,0,0,0,1.54488862144927,0,0,0,14.3660288172214,0,0,0,0,0,0,0.5709193985953,0,1.1875371125186,5.20455980298408,2.13125834818499,3.68984795609694,1.05505848386836,2.82212897125692,2.13633205260448,0.247194967734374,4.48258006451726,1.76922110389975,16.5002186946357,13.6921741445444,14.5462575940567,1.86391761218122,1.17112318804619,0.83778682725382,0.510914110417183,0,0,0,9.8861822007183,50.3250663100489,8.79580464790051,16.339486098074,22.2472447877388,9.55825004973976,16.5486088329113,5.90668310331835,10.9478134136882,6.82351447770922,2.52530227063769,4.42409506073193,5.9774547152703,5.22180176435513,5.42537344208574,10.1374383735478,8.45550553880009,7.77724313845749,6.72628763921441,5.6047678162539,8.13156144721623,6.68614271823006,5.69908904311695,7.22922847986555,17.7608604926305,17.6972637310831,7.76233640592123,0,0,0,4.55676699578104,5.39409937956521,8.64297895012871,12.5474709860161,13.5767319905709,12.1871019181029,20.4629871380359,35.6803623861494,76.0142378810273,63.5201020666035,54.3394306101805,74.9075800203707,51.6085955611423,37.3235195994786,57.5745536481995,12.6173969138476,3.70456604565424,0.991256348951394,0.528901133327089,1.49301775374664,0.928946687441754,1.80414445850931,0.403367049246685,1.77902435075896,0.951128130562796,0.949058123089023,0.164698954724011,1.25667604400135,0.994782360205754,1.36474860983384,0,1.72910439899755,2.38969527905241,2.46568271239006,6.05517116831563,13.5249282807697,6.31319116320474,5.43066964069352,5.61086559122549,9.04282480876879,1.62371162777562,2.511979645462,2.34454611451421,0,0.166845105716094,0.393117990226406,0.449724224769707,0.608580364165509,0,0,0,0,0,0,0.744281895337007,0.936113019343682,0,0,0,14.4107488329952,3.7898282354097,1.30371981153621,1.86719594352707,1.64283173801951,2.51259386162724,3.80869825417622,9.17128144931655,11.0344600874334,10.1873757238436,13.3942005672289,19.1720078217413,21.4129377513711,17.9364832641074,0,0,0.491764273019036,0,2.72936002979246,3.8679856575427,0,7.57412781613119,0,0,0,0.238968797952552,0,0,0,0,0,24.0990987316355,4.5420827266646,3.38324646967785,3.74640006513225,6.26886467295635,0,1.94224508923985,2.41858845571801,0.754420319023592,0.590603785761546,0.922305443831782,1.29214146584111,0.727067458955011,1.78248689192361,1.26414703174326,1.05418608574999,1.03135543248187,6.80879211507576,3.24109969256358,2.32845630808958,4.92975180572662,4.61084607469911,3.92411398724555,5.92376474167636,4.56697423671899,1.40803024838226,1.0591603543191,3.52845436887939,12.2015827176695,24.8655217111695,17.6113740790215,15.5184047204077,13.1312719796049,0.874442509889552,4.26478194624172,0,1.03193433981611,0.925972636848558,0.565105371014073,0.27338845544205,0.228778173206523,0,0.139951452323658,0,2.86401185404534,1.26534397432454,4.67634774391752,5.50827238191186,6.06356058441959,5.67742665740062,7.1478103583955,8.84391976261094,9.16145796944104,2.46268449254406,1.24267862617385,0,4.48549638131936,4.79829622325583,2.91676782516071,3.48731523389874,4.56181538825101,7.62822051197401,20.4420884205002,11.7442465756796,1.69108884578204,2.01621004380506,0.316011120628178,11.149886840959,13.1470025170979,8.44485349355668,6.98204113103178,3.17890167650024,2.04332264183947,2.06765338044408,1.81739609906666,1.06689529317,0.604957110821043,0.292373642219257,0.384847366561318,0,1.36038230169127,0,0.0897138566094757,0,12.7505132061246,2.43987218086537,0.73260649706906,2.14368379079066,2.00628841614145,28.8023439734704,29.4608151364593,36.6653128601214,24.2312987104599,23.9778881919725,24.9279986138601,33.7511250115903,28.3702358031259,30.3605414019417,23.2992140288319,0.93408612825759,4.78829848081237,4.26834014385335,7.53630822911712,6.07878171621149,5.33146174505041,13.5570503958985,13.598313777767,14.4413644316317,10.8659801058433,16.2226751929753,10.7517014590063,11.6115469262654,10.5001249943986,11.1999164463446,15.7176918123414,10.5454736609819,10.9958255664312,14.835092428919,12.0703114510206,14.057639347802,13.665637074269,8.34526664815623,13.3718703301742,13.4576413993923,12.6075765758598,13.1708140468396,14.7319038405192,13.716215498432,15.7119836064167,12.6939469392866,11.2295109908142,14.3230865109391,10.2258315182738,8.8737041051325,8.24374907195222,12.1644436391612,14.396360621236,19.7026982030909,10.1472052794977,10.8977882741598
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,6.97354979238772,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0.683045484958446,0,0.125896817975577,0.101376931219515,0,0,2.39827672018491,2.85592037554813,1.36100929351998,2.09979632438044,2.87505128729943,0.167782606057736,0,0,0,2.0057340795713,9.28209766099396,5.26022798234954,5.81890077199236,3.80298842103708,0,0,0,0,0,0.599200221036809,2.68952813725088,4.25127410464758,4.59020190327748,3.15487442027073,17.1390590642282,17.4486147351775,1.5923803897944,1.43768206527355,5.51531271966013,5.50579404996943,3.95830748064082,4.45458946443106,1.97829431595291,2.47016637726506,2.08365348222704,3.35019598801657,6.75315132038016,5.80633341551878,16.4992007865254,16.5151149726959,6.71038004971082,0.302904773332736,0.226714680320357,0.289864488701678,0,0,0,0,0,1.54488862144927,0,0,0,14.3660288172214,0,0,0,0,0,0,0.5709193985953,0,1.1875371125186,5.20455980298408,2.13125834818499,3.68984795609694,1.05505848386836,2.82212897125692,2.13633205260448,0.247194967734374,4.48258006451726,1.76922110389975,16.5002186946357,13.6921741445444,14.5462575940567,1.86391761218122,1.17112318804619,0.83778682725382,0.510914110417183,0,0,0,9.8861822007183,50.3250663100489,8.79580464790051,16.339486098074,22.2472447877388,9.55825004973976,16.5486088329113,5.90668310331835,10.9478134136882,6.82351447770922,2.52530227063769,4.42409506073193,5.9774547152703,5.22180176435513,5.42537344208574,10.1374383735478,8.45550553880009,7.77724313845749,6.72628763921441,5.6047678162539,8.13156144721623,6.68614271823006,5.69908904311695,7.22922847986555,17.7608604926305,17.6972637310831,7.76233640592123,0,0,0,4.55676699578104,5.39409937956521,8.64297895012871,12.5474709860161,13.5767319905709,12.1871019181029,20.4629871380359,35.6803623861494,76.0142378810273,63.5201020666035,54.3394306101805,74.9075800203707,51.6085955611423,37.3235195994786,57.5745536481995,12.6173969138476,3.70456604565424,0.991256348951394,0.528901133327089,1.49301775374664,0.928946687441754,1.80414445850931,0.403367049246685,1.77902435075896,0.951128130562796,0.949058123089023,0.164698954724011,1.25667604400135,0.994782360205754,1.36474860983384,0,1.72910439899755,2.38969527905241,2.46568271239006,6.05517116831563,13.5249282807697,6.31319116320474,5.43066964069352,5.61086559122549,9.04282480876879,1.62371162777562,2.511979645462,2.34454611451421,0,0.166845105716094,0.393117990226406,0.449724224769707,0.608580364165509,0,0,0,0,0,0,0.744281895337007,0.936113019343682,0,0,0,14.4107488329952,3.7898282354097,1.30371981153621,1.86719594352707,1.64283173801951,2.51259386162724,3.80869825417622,9.17128144931655,11.0344600874334,10.1873757238436,13.3942005672289,19.1720078217413,21.4129377513711,17.9364832641074,0,0,0.491764273019036,0,2.72936002979246,3.8679856575427,0,7.57412781613119,0,0,0,0.238968797952552,0,0,0,0,0,24.0990987316355,4.5420827266646,3.38324646967785,3.74640006513225,6.26886467295635,0,1.94224508923985,2.41858845571801,0.754420319023592,0.590603785761546,0.922305443831782,1.29214146584111,0.727067458955011,1.78248689192361,1.26414703174326,1.05418608574999,1.03135543248187,6.80879211507576,3.24109969256358,2.32845630808958,4.92975180572662,4.61084607469911,3.92411398724555,5.92376474167636,4.56697423671899,1.40803024838226,1.0591603543191,3.52845436887939,12.2015827176695,24.8655217111695,17.6113740790215,15.5184047204077,13.1312719796049,0.874442509889552,4.26478194624172,0,1.03193433981611,0.925972636848558,0.565105371014073,0.27338845544205,0.228778173206523,0,0.139951452323658,0,2.86401185404534,1.26534397432454,4.67634774391752,5.50827238191186,6.06356058441959,5.67742665740062,7.1478103583955,8.84391976261094,9.16145796944104,2.46268449254406,1.24267862617385,0,4.48549638131936,4.79829622325583,2.91676782516071,3.48731523389874,4.56181538825101,7.62822051197401,20.4420884205002,11.7442465756796,1.69108884578204,2.01621004380506,0.316011120628178,11.149886840959,13.1470025170979,8.44485349355668,6.98204113103178,3.17890167650024,2.04332264183947,2.06765338044408,1.81739609906666,1.06689529317,0.604957110821043,0.292373642219257,0.384847366561318,0,1.36038230169127,0,0.0897138566094757,0,12.7505132061246,2.43987218086537,0.73260649706906,2.14368379079066,2.00628841614145,28.8023439734704,29.4608151364593,36.6653128601214,24.2312987104599,23.9778881919725,24.9279986138601,33.7511250115903,28.3702358031259,30.3605414019417,23.2992140288319,0.93408612825759,4.78829848081237,4.26834014385335,7.53630822911712,6.07878171621149,5.33146174505041,13.5570503958985,13.598313777767,14.4413644316317,10.8659801058433,16.2226751929753,10.7517014590063,11.6115469262654,10.5001249943986,11.1999164463446,15.7176918123414,10.5454736609819,10.9958255664312,14.835092428919,12.0703114510206,14.057639347802,13.665637074269,8.34526664815623,13.3718703301742,13.4576413993923,12.6075765758598,13.1708140468396,14.7319038405192,13.716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|short_description=p1@Pdzd2
|short_description=p1@Pdzd2
}}
}}

Latest revision as of 15:43, 26 September 2015

Short description:p1@Pdzd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pdzd2_5end
Coexpression cluster:MCL_coexpression_mm9:2963
Association with transcript: 17bp_to_ENSMUST00000096893, ENSMUST00000169509, uc007vhu.1_5end
EntrezGene:Pdzd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pdzd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.45
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H14.48
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F516.50
bone (os femoris), neonate N16.CNhs11225.1525-43A613.69
bone (os femoris), neonate N20.CNhs11195.1350-25C314.55
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.89
corpus striatum, adult.CNhs10487.19-21D850.33
corpus striatum, neonate N00.CNhs11226.630-43F18.80
cortex, adult.CNhs10473.12-14D516.34
cortex, neonate N30.CNhs11107.1392-42F222.25
diencephalon, adult.CNhs10482.20-12F29.56
diencephalon, neonate N30.CNhs11201.1388-42B216.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.91
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.95
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C64.42
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D45.43
eyeball, neonate N00.CNhs11207.633-15C610.14
eyeball, neonate N01.CNhs11140.1532-43E78.46
eyeball, neonate N02.CNhs11205.1551-44G87.78
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H28.13
forelimb, embryo E13.CNhs10589.384-1E26.69
forelimb, embryo E14.CNhs10577.413-26A85.70
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C417.76
forelimb, embryo E18.CNhs11008.1520-43B517.70
gonad, embryo E13.CNhs11044.1564-45I67.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I98.64
heart, embryo E14.CNhs10597.403-26D412.55
heart, embryo E15.CNhs11017.431-16C813.58
heart, embryo E16.CNhs11021.457-17C612.19
heart, embryo E17.CNhs11025.479-18E520.46
heart, embryo E18.CNhs11030.1283-20G335.68
heart, neonate N00.CNhs11213.639-21E376.01
heart, neonate N03.CNhs11221.1349-25I263.52
heart, neonate N10.CNhs11118.749-24G154.34
heart, neonate N16.CNhs11209.782-15G174.91
heart, neonate N20.CNhs11127.821-26I651.61
heart, neonate N25.CNhs11196.1351-25D337.32
heart, neonate N30.CNhs11202.1390-42D257.57
hippocampus, adult.CNhs10478.13-16E812.62
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F86.06
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G75.61
kidney, neonate N10.CNhs11206.758-6D59.04
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B114.41
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C69.17
lung, neonate N06.CNhs11212.683-20E511.03
lung, neonate N07.CNhs11111.715-19A310.19
lung, neonate N10.CNhs11219.750-23E613.39
lung, neonate N20.CNhs11109.822-18A419.17
lung, neonate N25.CNhs11119.1359-25C721.41
lung, neonate N30.CNhs11133.1394-42H217.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I924.10
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I43.75
oviduct, adult pregnant day01.CNhs10500.988-6G66.27
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B94.61
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C312.20
skin, neonate N00.CNhs11124.650-25G424.87
skin, neonate N03.CNhs11215.662-22H317.61
skin, neonate N06.CNhs11097.693-20I515.52
skin, neonate N10.CNhs11108.762-6C413.13
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G84.68
stomach, embryo E16.CNhs11022.459-17D45.51
stomach, embryo E17.CNhs11006.1035-18D56.06
stomach, embryo E18.CNhs10999.1286-20C65.68
stomach, neonate N03.CNhs11193.1340-24B87.15
stomach, neonate N07.CNhs11210.718-18A98.84
stomach, neonate N25.CNhs11104.1355-25E49.16
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.49
testis, embryo E15.CNhs11034.443-27C54.80
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B77.63
testis, neonate N07.CNhs11222.726-26I420.44
testis, neonate N10.CNhs11204.763-44D911.74
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I411.15
thymus, embryo E15.CNhs11005.430-45I213.15
thymus, embryo E16.CNhs11002.456-26C58.44
thymus, embryo E17.CNhs10581.478-18C16.98
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E412.75
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.80
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A336.67
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.37
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.30
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D27.54
whole body, embryo E14.CNhs10519.395-14B16.08
whole body, embryo E16.CNhs10514.453-14F25.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.87
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.61
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.20
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.84
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.23
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F98.87
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B312.16
whole body, neonate N00.CNhs10525.657-19C214.40
whole body, neonate N01.CNhs10576.659-23C619.70
whole body, neonate N06.CNhs10515.692-21D110.15
whole body, neonate N10.CNhs10518.761-6B410.90





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.17e-1292
ecto-epithelium9.65e-0973
gray matter1.92e-0834
pre-chordal neural plate2.07e-0849
regional part of nervous system6.06e-0854
occipital lobe6.66e-0810
visual cortex6.66e-0810
neocortex6.66e-0810
neural tube7.67e-0852
neural rod7.67e-0852
future spinal cord7.67e-0852
neural keel7.67e-0852
compound organ1.47e-0743
neurectoderm1.70e-0764
neural plate1.70e-0764
presumptive neural plate1.70e-0764
anterior neural tube1.76e-0740
regional part of forebrain3.02e-0739
forebrain3.02e-0739
future forebrain3.02e-0739
primary circulatory organ3.77e-0718
heart3.77e-0718
primitive heart tube3.77e-0718
primary heart field3.77e-0718
anterior lateral plate mesoderm3.77e-0718
heart tube3.77e-0718
heart primordium3.77e-0718
cardiac mesoderm3.77e-0718
cardiogenic plate3.77e-0718
heart rudiment3.77e-0718
anatomical conduit9.73e-07122
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