FFCP PHASE1:Mm9::chr9:41389383..41389399,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100042464 | |EntrezGene=100042464 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3706 | |MCL_coexpression_id=3706 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_NR_015483,uc009pak.2,uc009pal.2_5end | |association_with_transcript=-22bp_to_NR_015483,uc009pak.2,uc009pal.2_5end | ||
|cluster_id=chr9:41389383..41389399,+ | |||
|description=CAGE_peak_2_at_2610203C20Rik_5end | |description=CAGE_peak_2_at_2610203C20Rik_5end | ||
|id=chr9:41389383..41389399,+ | |id=chr9:41389383..41389399,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.26e-17!50;CL:0000221!4.03e-16!44;CL:0000133!4.03e-16!44;CL:0002319!7.98e-16!43;CL:0000393!3.71e-13!39;CL:0000211!3.71e-13!39;CL:0000540!1.59e-10!33;CL:0000047!1.59e-10!33;CL:0000031!1.59e-10!33;CL:0000404!1.59e-10!33;CL:0000117!3.40e-10!23;CL:0000337!3.40e-10!23;CL:0002321!5.23e-08!70;CL:0000220!5.23e-08!70 | |ontology_enrichment_celltype=CL:0000055!1.26e-17!50;CL:0000221!4.03e-16!44;CL:0000133!4.03e-16!44;CL:0002319!7.98e-16!43;CL:0000393!3.71e-13!39;CL:0000211!3.71e-13!39;CL:0000540!1.59e-10!33;CL:0000047!1.59e-10!33;CL:0000031!1.59e-10!33;CL:0000404!1.59e-10!33;CL:0000117!3.40e-10!23;CL:0000337!3.40e-10!23;CL:0002321!5.23e-08!70;CL:0000220!5.23e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,7.66e-18,44;CL:0000133,7.66e-18,44;CL:0002319,1.66e-17,43;CL:0000393,1.71e-14,39;CL:0000211,1.71e-14,39;CL:0000540,1.60e-11,33;CL:0000047,1.60e-11,33;CL:0000031,1.60e-11,33;CL:0000404,1.60e-11,33;CL:0002321,1.80e-11,70;CL:0000117,2.37e-11,23;CL:0000337,2.37e-11,23;CL:0000333,2.51e-07,10;CL:0000095,2.51e-07,10;CL:0000243,2.51e-07,10;CL:0000123,2.51e-07,10;CL:0000125,2.51e-07,10;CL:0000030,2.51e-07,10;CL:0000339,2.51e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.39e-17!75;UBERON:0001016!1.39e-17!75;UBERON:0001017!9.37e-17!73;UBERON:0005743!9.37e-17!73;UBERON:0004121!6.72e-14!102;UBERON:0000924!6.72e-14!102;UBERON:0006601!6.72e-14!102;UBERON:0001049!2.28e-11!52;UBERON:0005068!2.28e-11!52;UBERON:0006241!2.28e-11!52;UBERON:0007135!2.28e-11!52;UBERON:0002616!1.84e-10!49;UBERON:0000955!2.07e-10!50;UBERON:0006238!2.07e-10!50;UBERON:0000033!4.38e-10!63;UBERON:0002346!1.30e-09!71;UBERON:0003075!1.30e-09!71;UBERON:0007284!1.30e-09!71;UBERON:0002020!1.27e-08!34;UBERON:0003080!2.02e-08!40;UBERON:0002780!4.71e-08!39;UBERON:0001890!4.71e-08!39;UBERON:0006240!4.71e-08!39;UBERON:0003056!5.18e-08!49;UBERON:0002791!2.27e-07!29;UBERON:0003528!2.27e-07!29;UBERON:0001893!2.27e-07!29 | |ontology_enrichment_uberon=UBERON:0000073!1.39e-17!75;UBERON:0001016!1.39e-17!75;UBERON:0001017!9.37e-17!73;UBERON:0005743!9.37e-17!73;UBERON:0004121!6.72e-14!102;UBERON:0000924!6.72e-14!102;UBERON:0006601!6.72e-14!102;UBERON:0001049!2.28e-11!52;UBERON:0005068!2.28e-11!52;UBERON:0006241!2.28e-11!52;UBERON:0007135!2.28e-11!52;UBERON:0002616!1.84e-10!49;UBERON:0000955!2.07e-10!50;UBERON:0006238!2.07e-10!50;UBERON:0000033!4.38e-10!63;UBERON:0002346!1.30e-09!71;UBERON:0003075!1.30e-09!71;UBERON:0007284!1.30e-09!71;UBERON:0002020!1.27e-08!34;UBERON:0003080!2.02e-08!40;UBERON:0002780!4.71e-08!39;UBERON:0001890!4.71e-08!39;UBERON:0006240!4.71e-08!39;UBERON:0003056!5.18e-08!49;UBERON:0002791!2.27e-07!29;UBERON:0003528!2.27e-07!29;UBERON:0001893!2.27e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.71e-17,75;UBERON:0001017,2.91e-16,73;UBERON:0004121,3.31e-13,95;UBERON:0000924,3.31e-13,95;UBERON:0006601,3.31e-13,95;UBERON:0000073,5.11e-11,54;UBERON:0001049,1.53e-10,52;UBERON:0005068,1.53e-10,52;UBERON:0006241,1.53e-10,52;UBERON:0007135,1.53e-10,52;UBERON:0002346,2.53e-09,64;UBERON:0003075,2.53e-09,64;UBERON:0007284,2.53e-09,64;UBERON:0002616,8.74e-09,46;UBERON:0000955,9.45e-09,47;UBERON:0006238,9.45e-09,47;UBERON:0002020,1.02e-08,34;UBERON:0010371,1.56e-08,73;UBERON:0003080,5.59e-08,40;UBERON:0002780,1.38e-07,39;UBERON:0001890,1.38e-07,39;UBERON:0006240,1.38e-07,39;UBERON:0003528,2.53e-07,29;UBERON:0002791,2.53e-07,29;UBERON:0001893,2.53e-07,29 | |||
|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29484089877886,7.09638518536602,3.85448179539531,17.9950009200049,6.5407546914134,4.83309602015838,6.41618666945135,4.75953833526233,7.18762821824858,0,0,0,3.60163210450326,3.72493471920384,2.06268836910977,5.26022798234954,4.7609188134483,4.43681982454325,13.2149367506962,8.89294796111139,2.6996991518442,1.97773272513395,1.4209602298922,3.89480143673926,3.84218305321555,6.53244557543409,7.56033254657468,9.46462326081219,3.99911378165325,1.32521124570968,7.96190194897201,5.84657373211242,5.51531271966013,3.30347642998166,2.042997409363,2.30409799884365,5.01167893374737,4.29991924931325,4.16730696445408,1.3959149950069,2.8138130501584,2.75036845998258,1.76777151284201,3.27454865837937,4.10078780815661,3.40767869999328,3.40072020480535,0.289864488701678,0,0,0,0,0,0.140444420131752,10.7371103224176,7.01422212427746,10.2468476607999,2.67602497575693,0,0,0,3.68034769719064,3.04031838570118,3.53867111510348,0.11418387971906,0.258937883647172,0.445326417194474,1.38788261412909,0.913396434936424,0.461230994512117,0.150722640552623,0.940709657085638,0.376999773989026,0.247194967734374,0.433798070759735,0.884610551949874,0.808834249737046,0,0.969750506270444,0,0.878342391034642,0.83778682725382,0.255457055208591,0,0,0,3.59497534571574,2.74500361691176,3.5183218591602,2.60736480288415,1.27857728665165,2.28566849015516,3.56930778749067,3.46253837091075,1.11966273549084,4.80173241023982,1.05220927943237,3.3831315170303,2.5289231487682,0.720248519221397,1.05493372485001,0.95251098811859,1.2811372028485,0.749613796477831,0.776110112217047,5.82033580918674,9.07709184805532,6.51019159406611,8.76782929710299,5.28289773528636,1.39300866608867,2.05782136407943,3.78165106955137,0,0,0,1.03562886267751,1.87620847984877,0.900310307305074,1.65721314909647,1.57411385397923,1.23413690309903,1.39520366850245,0.804820204198858,0.700592054203017,0.822799249567402,0.656669856316381,0.810688095458557,0.584799949701329,0.658650345873152,0.402619256281115,1.26173969138476,3.08713837137853,0,0,5.75878276445132,3.94802342162745,1.67527699718721,1.21010114774006,0.667134131534611,0.380451252225118,0,0.329397909448022,1.75934646160189,0.397912944082302,0.779856348476481,0,0,0,1.51734320762465,2.05647322697512,1.1270773567308,0.610953983535943,0.775809948670503,1.26244475802573,0.442655759869801,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.589676985339609,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0.739012760666419,2.84237117655727,0.488894929326078,0.848725428875941,1.17345124144251,0.335012514883631,0,0.390267295715598,0,0.221464689648775,0.478364305972461,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0,2.72936002979246,3.04750385139728,1.3114795630134,0.504941854408746,1.57754109708128,1.17131623288992,1.93881057959519,1.43381278771531,3.7875774594007,2.26461224631066,0.404810701674894,1.75353514746787,1.58115111178609,1.28528526568723,0.851640511249612,3.91744328067962,5.04949573996086,2.96946221350564,0,1.21390318077491,1.209294227859,1.69744571780308,0.885905678642318,1.53717573971964,1.55056975900933,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,0,0.680879211507576,3.78128297465751,2.19909762430683,2.35770738534752,2.12808280370728,1.78368817602071,0.658196082408484,0.304464949114599,0,0.21183207086382,0.441056796109924,0.98931751764888,0.968786560175433,1.68876189798836,1.07435109602823,1.31312719796049,0,2.78137953015765,0.170870880797853,2.06386867963222,1.29636169158798,0.188368457004691,0,0,0,0,0,0.954670618015114,3.79603192297362,2.43983360552218,2.37611749807963,2.09088296014469,2.18362563746178,1.75323650300267,1.65306911450672,1.04702376793612,0.129614973291793,0,0,2.0932316446157,2.31641886639937,0.583353565032143,1.54991788173277,0.675824501963113,1.40828686374905,0.39061315453185,0.629156066554265,0.241584120826006,0.576060012515731,0.316011120628178,1.41907650703115,1.43795340030758,1.42912905275575,0.179026695667481,0.79472541912506,0.360586348559907,0.147689527174577,0.201932899896295,0.381034033274999,0.100826185136841,0.292373642219257,0.384847366561318,0.233753804363138,1.36038230169127,0,0,0.167884616364078,2.31827512838629,0.750729901804728,0.549454872801795,2.14368379079066,0,1.6942555278512,0.920650473014354,1.71868654031819,1.3748254587495,1.37016503954128,0,0.675022500231806,0.900642406448441,2.71885445390523,2.07104124700728,3.73634451303036,6.3843979744165,6.14640980714883,2.18796045361465,2.09613162627982,1.10306105070008,3.77819437262746,2.26638562962784,3.53011130550997,2.52697211763797,2.02783439912192,2.64076877940507,1.96647165686753,2.17685518176556,1.55075766180156,1.42888107384922,1.15884325944855,1.73618298417335,3.29668720642645,2.35518272215036,2.05721551431249,1.4198064492747,0.953744759789284,2.47088908274958,2.82328141245992,1.86152137361688,2.37806364734604,2.89376682581627,2.17286582153379,1.68342681497322,0.711810108745045,1.57607171800902,2.04615521584845,1.70430525304563,1.92906610981141,3.74715866906919,1.63752125911786,3.22306581072447,0.956441660344217,2.42650561031467,1.85494268496337 | |phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.29484089877886,7.09638518536602,3.85448179539531,17.9950009200049,6.5407546914134,4.83309602015838,6.41618666945135,4.75953833526233,7.18762821824858,0,0,0,3.60163210450326,3.72493471920384,2.06268836910977,5.26022798234954,4.7609188134483,4.43681982454325,13.2149367506962,8.89294796111139,2.6996991518442,1.97773272513395,1.4209602298922,3.89480143673926,3.84218305321555,6.53244557543409,7.56033254657468,9.46462326081219,3.99911378165325,1.32521124570968,7.96190194897201,5.84657373211242,5.51531271966013,3.30347642998166,2.042997409363,2.30409799884365,5.01167893374737,4.29991924931325,4.16730696445408,1.3959149950069,2.8138130501584,2.75036845998258,1.76777151284201,3.27454865837937,4.10078780815661,3.40767869999328,3.40072020480535,0.289864488701678,0,0,0,0,0,0.140444420131752,10.7371103224176,7.01422212427746,10.2468476607999,2.67602497575693,0,0,0,3.68034769719064,3.04031838570118,3.53867111510348,0.11418387971906,0.258937883647172,0.445326417194474,1.38788261412909,0.913396434936424,0.461230994512117,0.150722640552623,0.940709657085638,0.376999773989026,0.247194967734374,0.433798070759735,0.884610551949874,0.808834249737046,0,0.969750506270444,0,0.878342391034642,0.83778682725382,0.255457055208591,0,0,0,3.59497534571574,2.74500361691176,3.5183218591602,2.60736480288415,1.27857728665165,2.28566849015516,3.56930778749067,3.46253837091075,1.11966273549084,4.80173241023982,1.05220927943237,3.3831315170303,2.5289231487682,0.720248519221397,1.05493372485001,0.95251098811859,1.2811372028485,0.749613796477831,0.776110112217047,5.82033580918674,9.07709184805532,6.51019159406611,8.76782929710299,5.28289773528636,1.39300866608867,2.05782136407943,3.78165106955137,0,0,0,1.03562886267751,1.87620847984877,0.900310307305074,1.65721314909647,1.57411385397923,1.23413690309903,1.39520366850245,0.804820204198858,0.700592054203017,0.822799249567402,0.656669856316381,0.810688095458557,0.584799949701329,0.658650345873152,0.402619256281115,1.26173969138476,3.08713837137853,0,0,5.75878276445132,3.94802342162745,1.67527699718721,1.21010114774006,0.667134131534611,0.380451252225118,0,0.329397909448022,1.75934646160189,0.397912944082302,0.779856348476481,0,0,0,1.51734320762465,2.05647322697512,1.1270773567308,0.610953983535943,0.775809948670503,1.26244475802573,0.442655759869801,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0.589676985339609,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0.312037673114561,0,0,0,0.739012760666419,2.84237117655727,0.488894929326078,0.848725428875941,1.17345124144251,0.335012514883631,0,0.390267295715598,0,0.221464689648775,0.478364305972461,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0,2.72936002979246,3.04750385139728,1.3114795630134,0.504941854408746,1.57754109708128,1.17131623288992,1.93881057959519,1.43381278771531,3.7875774594007,2.26461224631066,0.404810701674894,1.75353514746787,1.58115111178609,1.28528526568723,0.851640511249612,3.91744328067962,5.04949573996086,2.96946221350564,0,1.21390318077491,1.209294227859,1.69744571780308,0.885905678642318,1.53717573971964,1.55056975900933,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,0,0.680879211507576,3.78128297465751,2.19909762430683,2.35770738534752,2.12808280370728,1.78368817602071,0.658196082408484,0.304464949114599,0,0.21183207086382,0.441056796109924,0.98931751764888,0.968786560175433,1.68876189798836,1.07435109602823,1.31312719796049,0,2.78137953015765,0.170870880797853,2.06386867963222,1.29636169158798,0.188368457004691,0,0,0,0,0,0.954670618015114,3.79603192297362,2.43983360552218,2.37611749807963,2.09088296014469,2.18362563746178,1.75323650300267,1.65306911450672,1.04702376793612,0.129614973291793,0,0,2.0932316446157,2.31641886639937,0.583353565032143,1.54991788173277,0.675824501963113,1.40828686374905,0.39061315453185,0.629156066554265,0.241584120826006,0.576060012515731,0.316011120628178,1.41907650703115,1.43795340030758,1.42912905275575,0.179026695667481,0.79472541912506,0.360586348559907,0.147689527174577,0.201932899896295,0.381034033274999,0.100826185136841,0.292373642219257,0.384847366561318,0.233753804363138,1.36038230169127,0,0,0.167884616364078,2.31827512838629,0.750729901804728,0.549454872801795,2.14368379079066,0,1.6942555278512,0.920650473014354,1.71868654031819,1.3748254587495,1.37016503954128,0,0.675022500231806,0.900642406448441,2.71885445390523,2.07104124700728,3.73634451303036,6.3843979744165,6.14640980714883,2.18796045361465,2.09613162627982,1.10306105070008,3.77819437262746,2.26638562962784,3.53011130550997,2.52697211763797,2.02783439912192,2.64076877940507,1.96647165686753,2.17685518176556,1.55075766180156,1.42888107384922,1.15884325944855,1.73618298417335,3.29668720642645,2.35518272215036,2.05721551431249,1.4198064492747,0.953744759789284,2.47088908274958,2.82328141245992,1.86152137361688,2.37806364734604,2.89376682581627,2.17286582153379,1.68342681497322,0.711810108745045,1.57607171800902,2.04615521584845,1.70430525304563,1.92906610981141,3.74715866906919,1.63752125911786,3.22306581072447,0.956441660344217,2.42650561031467,1.85494268496337 | ||
|short_description=p2@2610203C20Rik | |short_description=p2@2610203C20Rik | ||
}} | }} |
Latest revision as of 15:45, 26 September 2015
Short description: | p2@2610203C20Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_2610203C20Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3706 |
Association with transcript: | -22bp_to_NR_015483, uc009pak.2, uc009pal.2_5end |
EntrezGene: | 2610203C20Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 7.66e-18 | 44 |
neurectodermal cell | 7.66e-18 | 44 |
neural cell | 1.66e-17 | 43 |
electrically responsive cell | 1.71e-14 | 39 |
electrically active cell | 1.71e-14 | 39 |
neuron | 1.60e-11 | 33 |
neuronal stem cell | 1.60e-11 | 33 |
neuroblast | 1.60e-11 | 33 |
electrically signaling cell | 1.60e-11 | 33 |
embryonic cell | 1.80e-11 | 70 |
CNS neuron (sensu Vertebrata) | 2.37e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.37e-11 | 23 |
migratory neural crest cell | 2.51e-07 | 10 |
neuron associated cell | 2.51e-07 | 10 |
glial cell (sensu Vertebrata) | 2.51e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.51e-07 | 10 |
glial cell | 2.51e-07 | 10 |
glioblast | 2.51e-07 | 10 |
glioblast (sensu Vertebrata) | 2.51e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.71e-17 | 75 |
central nervous system | 2.91e-16 | 73 |
ectoderm-derived structure | 3.31e-13 | 95 |
ectoderm | 3.31e-13 | 95 |
presumptive ectoderm | 3.31e-13 | 95 |
regional part of nervous system | 5.11e-11 | 54 |
neural tube | 1.53e-10 | 52 |
neural rod | 1.53e-10 | 52 |
future spinal cord | 1.53e-10 | 52 |
neural keel | 1.53e-10 | 52 |
neurectoderm | 2.53e-09 | 64 |
neural plate | 2.53e-09 | 64 |
presumptive neural plate | 2.53e-09 | 64 |
regional part of brain | 8.74e-09 | 46 |
brain | 9.45e-09 | 47 |
future brain | 9.45e-09 | 47 |
gray matter | 1.02e-08 | 34 |
ecto-epithelium | 1.56e-08 | 73 |
anterior neural tube | 5.59e-08 | 40 |
regional part of forebrain | 1.38e-07 | 39 |
forebrain | 1.38e-07 | 39 |
future forebrain | 1.38e-07 | 39 |
brain grey matter | 2.53e-07 | 29 |
regional part of telencephalon | 2.53e-07 | 29 |
telencephalon | 2.53e-07 | 29 |