FFCP PHASE1:Mm9::chr9:50467675..50467678,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=235339|HGNC=|UniProt=Q8BMF4|association_with_transcript=206bp_to_ENSMUST00000034567,NM_145614,uc009pka.2_5end|description=CAGE_peak_4_at_Dlat_5end|id=chr9:50467675..50467678,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!7.81e-07!10;UBERON:0000411!7.81e-07!10;UBERON:0001950!7.81e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.79e-12,10;UBERON:0000411,2.79e-12,10;UBERON:0001950,2.79e-12,10;UBERON:0003528,8.56e-09,29;UBERON:0002791,8.56e-09,29;UBERON:0001893,8.56e-09,29;UBERON:0000073,1.22e-08,54;UBERON:0002616,1.53e-08,46;UBERON:0002619,2.58e-08,17;UBERON:0002020,2.75e-08,34;UBERON:0000955,2.84e-08,47;UBERON:0006238,2.84e-08,47;UBERON:0001049,4.24e-08,52;UBERON:0005068,4.24e-08,52;UBERON:0006241,4.24e-08,52;UBERON:0007135,4.24e-08,52;UBERON:0000956,5.78e-08,21;UBERON:0001869,5.78e-08,21;UBERON:0000203,5.78e-08,21;UBERON:0003080,6.77e-08,40;UBERON:0002950,1.18e-07,4;UBERON:0001891,1.18e-07,4;UBERON:0009616,1.18e-07,4;UBERON:0010286,1.18e-07,4;UBERON:0010314,1.73e-07,92;UBERON:0004111,5.93e-07,122;UBERON:0002780,6.09e-07,39;UBERON:0001890,6.09e-07,39;UBERON:0006240,6.09e-07,39|phase1_expression=0,0,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0,0.387369970324729,0,0,0,0.319088635981346,0.171200729931206,0.174840804837995,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0,0.935476191661768,0,0.261199789138935,0.159992422793407,0.22940928106717,0,0.430761996159075,0.430942465371778,0,0.504060259519861,0.221730510655305,0,0.61506478758457,0,0.866554859253824,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0.405507724878058,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0.671130424230945,0,0,0.257259436035947,0.573066879877513,0,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0.207379224616955,0.270011876663381,0.630974884054146,1.14260393761521,0.883474163806454,0.122490799214954,0,0,0,0.766124028511126,1.0752457327937,0,0.182975287204819,0,1.11673199600552,1.12552522006336,1.06958773443767,0,0.569486723196412,0.186399445825301,0.227178579999552,0.377857800533928,0,0,0,2.15881276655127,0,0.448026887097336,0.421333260395256,0.340860645156116,0,0,0.14084341977668,0,0,0,0.216491041011214,0,1.01104889002957,0.22836775943812,0.258937883647172,0.148442139064825,0,0,0.461230994512117,0,0.117588707135705,1.0053327306374,0,2.60278842455841,0,0.161766849947409,0.883366073841574,0.484875253135222,0,0.585561594023094,1.04723353406728,0.255457055208591,0,0,0,1.64769703345305,0.915001205637253,0.502617408451458,1.39059456153821,2.55715457330331,2.0778804455956,0.648965052271031,0,0.746441823660558,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0.512454881139399,0,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0.568326998791185,0.414251545071004,0.469052119962192,0.540186184383045,0.23674473558521,0.787056926989615,0,0.465067889500816,0.804820204198858,0.817357396570186,1.15191894939436,1.14917224855367,2.43206428637567,1.75439984910399,2.41505126820156,2.01309628140558,1.26173969138476,0.720332286654991,0.330418782983798,0.793351699990633,0,0.464473343720877,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0,0.898819408654221,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0.210407459670956,0.442655759869801,1.18088118383682,1.09899109488962,0.740382983530803,0.889357881261447,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0.482354319504834,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0,1.26289438973556,0.538192240565737,0,0,0,0.162964976442026,0.169745085775188,0.469380496577004,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0,0.478364305972461,0,0.345369963731791,0.144649058581512,0,0,1.47529281905711,1.10374698521893,0.963303539926752,1.40654023910644,0.327869890753351,1.26235463602186,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0.425820255624806,0,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0.727067458955011,1.06949213515416,0.316036757935816,0,1.03135543248187,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0,0.469343416127421,0.63549621259146,0.220528398054962,0.49465875882444,0.645857706783622,0.301564624640779,0.358117032009409,0.656563598980245,1.1659233465194,0.370850604021019,0.854354403989263,0.206386867963223,0.185194527369712,0,0.27338845544205,0.228778173206523,0,0.139951452323658,0.276399947608848,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.247960367176008,0.785267825952089,0.648074866458964,1.24267862617385,1.12738587736838,0.598066184175915,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0.314578033277133,0.241584120826006,1.15212002503146,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0.596044064343795,0.240390899039938,0.295379054349154,0.706765149637033,0.381034033274999,0.201652370273681,0.38983152295901,0.288635524920988,0.233753804363138,0.680191150845634,0,0.179427713218951,0.335769232728157,0.386379188064381,0.375364950902364,0,1.07184189539533,0.501572104035363,4.51801474093653,2.30162618253588,1.14579102687879,1.03111909406213,2.05524755931193,3.7769694869485,1.35004500046361,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0,0,0.838452650511929,0.367687016900028,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0,0.37456602987953,0.640251524048693,0.34461281373368,0,0.811190281613988,0,0.412085900803307,0.735994600671987,1.02860775715625,0.70990322463735,0,0.872078499793971,1.03520318456864,0.930760686808441,0.182927972872773,1.05227884575137,0.679020569229309,0,0.711810108745045,0.689531376628944,1.22769312950907,0.929621047115796,0.385813221962283,0,0.233931608445408,1.28922632428979,0.765153328275374,0.220591419119515,0.927471342481686|short_description=p4@Dlat}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=235339 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8BMF4 | |||
|association_with_transcript=206bp_to_ENSMUST00000034567,NM_145614,uc009pka.2_5end | |||
|cluster_id=chr9:50467675..50467678,- | |||
|description=CAGE_peak_4_at_Dlat_5end | |||
|id=chr9:50467675..50467678,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!7.81e-07!10;UBERON:0000411!7.81e-07!10;UBERON:0001950!7.81e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.79e-12,10;UBERON:0000411,2.79e-12,10;UBERON:0001950,2.79e-12,10;UBERON:0003528,8.56e-09,29;UBERON:0002791,8.56e-09,29;UBERON:0001893,8.56e-09,29;UBERON:0000073,1.22e-08,54;UBERON:0002616,1.53e-08,46;UBERON:0002619,2.58e-08,17;UBERON:0002020,2.75e-08,34;UBERON:0000955,2.84e-08,47;UBERON:0006238,2.84e-08,47;UBERON:0001049,4.24e-08,52;UBERON:0005068,4.24e-08,52;UBERON:0006241,4.24e-08,52;UBERON:0007135,4.24e-08,52;UBERON:0000956,5.78e-08,21;UBERON:0001869,5.78e-08,21;UBERON:0000203,5.78e-08,21;UBERON:0003080,6.77e-08,40;UBERON:0002950,1.18e-07,4;UBERON:0001891,1.18e-07,4;UBERON:0009616,1.18e-07,4;UBERON:0010286,1.18e-07,4;UBERON:0010314,1.73e-07,92;UBERON:0004111,5.93e-07,122;UBERON:0002780,6.09e-07,39;UBERON:0001890,6.09e-07,39;UBERON:0006240,6.09e-07,39 | |||
|phase1_expression=0,0,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0,0.387369970324729,0,0,0,0.319088635981346,0.171200729931206,0.174840804837995,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0,0.935476191661768,0,0.261199789138935,0.159992422793407,0.22940928106717,0,0.430761996159075,0.430942465371778,0,0.504060259519861,0.221730510655305,0,0.61506478758457,0,0.866554859253824,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0.405507724878058,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0.139986421625363,0,0.671130424230945,0,0,0.257259436035947,0.573066879877513,0,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0.207379224616955,0.270011876663381,0.630974884054146,1.14260393761521,0.883474163806454,0.122490799214954,0,0,0,0.766124028511126,1.0752457327937,0,0.182975287204819,0,1.11673199600552,1.12552522006336,1.06958773443767,0,0.569486723196412,0.186399445825301,0.227178579999552,0.377857800533928,0,0,0,2.15881276655127,0,0.448026887097336,0.421333260395256,0.340860645156116,0,0,0.14084341977668,0,0,0,0.216491041011214,0,1.01104889002957,0.22836775943812,0.258937883647172,0.148442139064825,0,0,0.461230994512117,0,0.117588707135705,1.0053327306374,0,2.60278842455841,0,0.161766849947409,0.883366073841574,0.484875253135222,0,0.585561594023094,1.04723353406728,0.255457055208591,0,0,0,1.64769703345305,0.915001205637253,0.502617408451458,1.39059456153821,2.55715457330331,2.0778804455956,0.648965052271031,0,0.746441823660558,0,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0.512454881139399,0,0.258703370739016,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0.568326998791185,0.414251545071004,0.469052119962192,0.540186184383045,0.23674473558521,0.787056926989615,0,0.465067889500816,0.804820204198858,0.817357396570186,1.15191894939436,1.14917224855367,2.43206428637567,1.75439984910399,2.41505126820156,2.01309628140558,1.26173969138476,0.720332286654991,0.330418782983798,0.793351699990633,0,0.464473343720877,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0,0.898819408654221,0,0.398282546508734,0.189667900953082,0.228497025219458,0,0.407302655690628,0,0.210407459670956,0.442655759869801,1.18088118383682,1.09899109488962,0.740382983530803,0.889357881261447,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0.482354319504834,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0.744281895337007,0,1.26289438973556,0.538192240565737,0,0,0,0.162964976442026,0.169745085775188,0.469380496577004,0.335012514883631,0.476087281772027,0.195133647857799,0.157635144106191,0,0.478364305972461,0,0.345369963731791,0.144649058581512,0,0,1.47529281905711,1.10374698521893,0.963303539926752,1.40654023910644,0.327869890753351,1.26235463602186,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0.425820255624806,0,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0.727067458955011,1.06949213515416,0.316036757935816,0,1.03135543248187,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0,0.469343416127421,0.63549621259146,0.220528398054962,0.49465875882444,0.645857706783622,0.301564624640779,0.358117032009409,0.656563598980245,1.1659233465194,0.370850604021019,0.854354403989263,0.206386867963223,0.185194527369712,0,0.27338845544205,0.228778173206523,0,0.139951452323658,0.276399947608848,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.247960367176008,0.785267825952089,0.648074866458964,1.24267862617385,1.12738587736838,0.598066184175915,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0.314578033277133,0.241584120826006,1.15212002503146,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0.596044064343795,0.240390899039938,0.295379054349154,0.706765149637033,0.381034033274999,0.201652370273681,0.38983152295901,0.288635524920988,0.233753804363138,0.680191150845634,0,0.179427713218951,0.335769232728157,0.386379188064381,0.375364950902364,0,1.07184189539533,0.501572104035363,4.51801474093653,2.30162618253588,1.14579102687879,1.03111909406213,2.05524755931193,3.7769694869485,1.35004500046361,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0,0,0.838452650511929,0.367687016900028,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0,0.37456602987953,0.640251524048693,0.34461281373368,0,0.811190281613988,0,0.412085900803307,0.735994600671987,1.02860775715625,0.70990322463735,0,0.872078499793971,1.03520318456864,0.930760686808441,0.182927972872773,1.05227884575137,0.679020569229309,0,0.711810108745045,0.689531376628944,1.22769312950907,0.929621047115796,0.385813221962283,0,0.233931608445408,1.28922632428979,0.765153328275374,0.220591419119515,0.927471342481686 | |||
|short_description=p4@Dlat | |||
}} |
Latest revision as of 19:30, 26 September 2015
Short description: | p4@Dlat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dlat_5end |
Coexpression cluster: | NA |
Association with transcript: | 206bp_to_ENSMUST00000034567, NM_145614, uc009pka.2_5end |
EntrezGene: | Dlat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.79e-12 | 10 |
visual cortex | 2.79e-12 | 10 |
neocortex | 2.79e-12 | 10 |
brain grey matter | 8.56e-09 | 29 |
regional part of telencephalon | 8.56e-09 | 29 |
telencephalon | 8.56e-09 | 29 |
regional part of nervous system | 1.22e-08 | 54 |
regional part of brain | 1.53e-08 | 46 |
regional part of cerebral cortex | 2.58e-08 | 17 |
gray matter | 2.75e-08 | 34 |
brain | 2.84e-08 | 47 |
future brain | 2.84e-08 | 47 |
neural tube | 4.24e-08 | 52 |
neural rod | 4.24e-08 | 52 |
future spinal cord | 4.24e-08 | 52 |
neural keel | 4.24e-08 | 52 |
cerebral cortex | 5.78e-08 | 21 |
cerebral hemisphere | 5.78e-08 | 21 |
pallium | 5.78e-08 | 21 |
anterior neural tube | 6.77e-08 | 40 |
regional part of midbrain | 1.18e-07 | 4 |
midbrain | 1.18e-07 | 4 |
presumptive midbrain | 1.18e-07 | 4 |
midbrain neural tube | 1.18e-07 | 4 |
structure with developmental contribution from neural crest | 1.73e-07 | 92 |
anatomical conduit | 5.93e-07 | 122 |
regional part of forebrain | 6.09e-07 | 39 |
forebrain | 6.09e-07 | 39 |
future forebrain | 6.09e-07 | 39 |