FFCP PHASE1:Mm9::chr2:71366595..71366604,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13390 | |EntrezGene=13390 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=184 | |||
|TSSclassifier=NA | |||
|UniProt=G3UX87 | |UniProt=G3UX87 | ||
|association_with_transcript=-135bp_to_ENSMUST00000126400_5end | |association_with_transcript=-135bp_to_ENSMUST00000126400_5end | ||
|cluster_id=chr2:71366595..71366604,+ | |||
|description=CAGE_peak_10_at_Dlx1_5end | |description=CAGE_peak_10_at_Dlx1_5end | ||
|id=chr2:71366595..71366604,+ | |id=chr2:71366595..71366604,+ | ||
|ontology_enrichment_celltype=CL:0002609!5.77e-14!6;CL:0002608!4.38e-08!3;CL:0002613!7.12e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,2.33e-44,3;CL:0002609,4.72e-39,6;CL:0000117,1.11e-10,23;CL:0000337,1.11e-10,23;CL:0000540,1.34e-07,33;CL:0000047,1.34e-07,33;CL:0000031,1.34e-07,33;CL:0000404,1.34e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!4.48e-11!5;UBERON:0002435!4.48e-11!5;UBERON:0000204!4.48e-11!5;UBERON:0010082!4.48e-11!5;UBERON:0002791!1.60e-10!29;UBERON:0003528!1.60e-10!29;UBERON:0001893!1.60e-10!29;UBERON:0002020!1.64e-08!34;UBERON:0002780!2.48e-08!39;UBERON:0001890!2.48e-08!39;UBERON:0006240!2.48e-08!39;UBERON:0003080!4.87e-08!40;UBERON:0000955!5.22e-08!50;UBERON:0006238!5.22e-08!50;UBERON:0002616!4.85e-07!49;UBERON:0003056!6.21e-07!49;UBERON:0002420!9.69e-07!8;UBERON:0007245!9.69e-07!8;UBERON:0010009!9.69e-07!8;UBERON:0010011!9.69e-07!8;UBERON:0000454!9.69e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.47e-19,7;UBERON:0003022,1.47e-19,7;UBERON:0002421,1.47e-19,7;UBERON:0000349,1.47e-19,7;UBERON:0002600,1.47e-19,7;UBERON:0003528,5.32e-13,29;UBERON:0002791,5.32e-13,29;UBERON:0001893,5.32e-13,29;UBERON:0000956,1.20e-11,21;UBERON:0001869,1.20e-11,21;UBERON:0000203,1.20e-11,21;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0002020,3.72e-11,34;UBERON:0002780,8.86e-10,39;UBERON:0001890,8.86e-10,39;UBERON:0006240,8.86e-10,39;UBERON:0003080,1.52e-09,40;UBERON:0002619,1.66e-08,17;UBERON:0002616,2.39e-08,46;UBERON:0003056,7.37e-08,49;UBERON:0001017,1.48e-07,73;UBERON:0001049,2.00e-07,52;UBERON:0005068,2.00e-07,52;UBERON:0006241,2.00e-07,52;UBERON:0007135,2.00e-07,52;UBERON:0001016,2.31e-07,75;UBERON:0000073,3.67e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,1.26194976810829,0,0,3.42974237801871,4.79227355091182,1.83843757322004,0,0,0,0.131886287730194,0.457438218012048,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915001205637253,3.39266750704734,0,0.255715457330331,0,0.648965052271031,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0.64183841918363,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,1.26194976810829,0,0,3.42974237801871,4.79227355091182,1.83843757322004,0,0,0,0.131886287730194,0.457438218012048,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915001205637253,3.39266750704734,0,0.255715457330331,0,0.648965052271031,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823236899034275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0.64183841918363,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p10@Dlx1 | |short_description=p10@Dlx1 | ||
}} | }} |
Latest revision as of 22:23, 26 September 2015
Short description: | p10@Dlx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Dlx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | -135bp_to_ENSMUST00000126400_5end |
EntrezGene: | Dlx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 2.33e-44 | 3 |
neuron of cerebral cortex | 4.72e-39 | 6 |
CNS neuron (sensu Vertebrata) | 1.11e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.11e-10 | 23 |
neuron | 1.34e-07 | 33 |
neuronal stem cell | 1.34e-07 | 33 |
neuroblast | 1.34e-07 | 33 |
electrically signaling cell | 1.34e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.47e-19 | 7 |
lobe parts of cerebral cortex | 1.47e-19 | 7 |
hippocampal formation | 1.47e-19 | 7 |
limbic system | 1.47e-19 | 7 |
limbic lobe | 1.47e-19 | 7 |
brain grey matter | 5.32e-13 | 29 |
regional part of telencephalon | 5.32e-13 | 29 |
telencephalon | 5.32e-13 | 29 |
cerebral cortex | 1.20e-11 | 21 |
cerebral hemisphere | 1.20e-11 | 21 |
pallium | 1.20e-11 | 21 |
brain | 1.50e-11 | 47 |
future brain | 1.50e-11 | 47 |
gray matter | 3.72e-11 | 34 |
regional part of forebrain | 8.86e-10 | 39 |
forebrain | 8.86e-10 | 39 |
future forebrain | 8.86e-10 | 39 |
anterior neural tube | 1.52e-09 | 40 |
regional part of cerebral cortex | 1.66e-08 | 17 |
regional part of brain | 2.39e-08 | 46 |
pre-chordal neural plate | 7.37e-08 | 49 |
central nervous system | 1.48e-07 | 73 |
neural tube | 2.00e-07 | 52 |
neural rod | 2.00e-07 | 52 |
future spinal cord | 2.00e-07 | 52 |
neural keel | 2.00e-07 | 52 |
nervous system | 2.31e-07 | 75 |
regional part of nervous system | 3.67e-07 | 54 |