FFCP PHASE1:Mm9::chr1:193541759..193541783,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:193541759..193541783,+
|short_description=p5@Lpgat1
|description=CAGE_peak_5_at_Lpgat1_5end
|association_with_transcript=46bp_to_ENSMUST00000110855,ENSMUST...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=226856 | |EntrezGene=226856 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=208 | |||
|TSSclassifier=NA | |||
|UniProt=Q91YX5,D3YUD1 | |UniProt=Q91YX5,D3YUD1 | ||
|association_with_transcript=46bp_to_ENSMUST00000110855,ENSMUST00000133076_5end | |||
|cluster_id=chr1:193541759..193541783,+ | |||
|description=CAGE_peak_5_at_Lpgat1_5end | |||
|id=chr1:193541759..193541783,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.56e-09!50;UBERON:0006238!1.56e-09!50;UBERON:0002616!3.58e-09!49;UBERON:0000033!1.54e-08!63;UBERON:0001049!6.50e-08!52;UBERON:0005068!6.50e-08!52;UBERON:0006241!6.50e-08!52;UBERON:0007135!6.50e-08!52;UBERON:0001017!7.51e-08!73;UBERON:0005743!7.51e-08!73;UBERON:0002791!1.28e-07!29;UBERON:0003528!1.28e-07!29;UBERON:0001893!1.28e-07!29;UBERON:0004121!1.57e-07!102;UBERON:0000924!1.57e-07!102;UBERON:0006601!1.57e-07!102;UBERON:0000073!2.71e-07!75;UBERON:0001016!2.71e-07!75;UBERON:0002020!4.07e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.80e-10,54;UBERON:0001017,1.32e-09,73;UBERON:0004121,2.21e-09,95;UBERON:0000924,2.21e-09,95;UBERON:0006601,2.21e-09,95;UBERON:0001049,5.19e-09,52;UBERON:0005068,5.19e-09,52;UBERON:0006241,5.19e-09,52;UBERON:0007135,5.19e-09,52;UBERON:0000955,6.58e-09,47;UBERON:0006238,6.58e-09,47;UBERON:0001016,6.95e-09,75;UBERON:0002616,1.66e-08,46;UBERON:0010371,4.79e-08,73;UBERON:0003528,4.81e-08,29;UBERON:0002791,4.81e-08,29;UBERON:0001893,4.81e-08,29;UBERON:0000025,5.39e-08,114;UBERON:0002020,8.77e-08,34;UBERON:0002346,2.83e-07,64;UBERON:0003075,2.83e-07,64;UBERON:0007284,2.83e-07,64;UBERON:0010314,5.55e-07,92;UBERON:0000956,5.76e-07,21;UBERON:0001869,5.76e-07,21;UBERON:0000203,5.76e-07,21;UBERON:0004111,5.93e-07,122 | |||
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| ||
|short_description=p5@Lpgat1 | |||
}} | }} |
Latest revision as of 00:21, 27 September 2015
Short description: | p5@Lpgat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lpgat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:208 |
Association with transcript: | 46bp_to_ENSMUST00000110855, ENSMUST00000133076_5end |
EntrezGene: | Lpgat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.80e-10 | 54 |
central nervous system | 1.32e-09 | 73 |
ectoderm-derived structure | 2.21e-09 | 95 |
ectoderm | 2.21e-09 | 95 |
presumptive ectoderm | 2.21e-09 | 95 |
neural tube | 5.19e-09 | 52 |
neural rod | 5.19e-09 | 52 |
future spinal cord | 5.19e-09 | 52 |
neural keel | 5.19e-09 | 52 |
brain | 6.58e-09 | 47 |
future brain | 6.58e-09 | 47 |
nervous system | 6.95e-09 | 75 |
regional part of brain | 1.66e-08 | 46 |
ecto-epithelium | 4.79e-08 | 73 |
brain grey matter | 4.81e-08 | 29 |
regional part of telencephalon | 4.81e-08 | 29 |
telencephalon | 4.81e-08 | 29 |
tube | 5.39e-08 | 114 |
gray matter | 8.77e-08 | 34 |
neurectoderm | 2.83e-07 | 64 |
neural plate | 2.83e-07 | 64 |
presumptive neural plate | 2.83e-07 | 64 |
structure with developmental contribution from neural crest | 5.55e-07 | 92 |
cerebral cortex | 5.76e-07 | 21 |
cerebral hemisphere | 5.76e-07 | 21 |
pallium | 5.76e-07 | 21 |
anatomical conduit | 5.93e-07 | 122 |