FFCP PHASE1:Mm9::chr1:34899822..34899829,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=214469 | |EntrezGene=214469 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=G3UWF0,E9Q917,Q80XQ8 | |UniProt=G3UWF0,E9Q917,Q80XQ8 | ||
|association_with_transcript=65bp_to_ENSMUST00000167518,ENSMUST00000170092,NM_001160235,NM_001160236,NM_174997,uc007apj.2,uc011wje.1,uc011wjf.1_5end | |association_with_transcript=65bp_to_ENSMUST00000167518,ENSMUST00000170092,NM_001160235,NM_001160236,NM_174997,uc007apj.2,uc011wje.1,uc011wjf.1_5end | ||
|cluster_id=chr1:34899822..34899829,- | |||
|description=CAGE_peak_3_at_Fam168b_5end | |description=CAGE_peak_3_at_Fam168b_5end | ||
|id=chr1:34899822..34899829,- | |id=chr1:34899822..34899829,- | ||
|ontology_enrichment_celltype=CL:0002319!4.33e-16!43;CL:0000221!8.92e-16!44;CL:0000133!8.92e-16!44;CL:0000117!2.66e-15!23;CL:0000337!2.66e-15!23;CL:0000540!4.96e-15!33;CL:0000047!4.96e-15!33;CL:0000031!4.96e-15!33;CL:0000404!4.96e-15!33;CL:0000055!2.45e-14!50;CL:0000393!4.47e-14!39;CL:0000211!4.47e-14!39 | |ontology_enrichment_celltype=CL:0002319!4.33e-16!43;CL:0000221!8.92e-16!44;CL:0000133!8.92e-16!44;CL:0000117!2.66e-15!23;CL:0000337!2.66e-15!23;CL:0000540!4.96e-15!33;CL:0000047!4.96e-15!33;CL:0000031!4.96e-15!33;CL:0000404!4.96e-15!33;CL:0000055!2.45e-14!50;CL:0000393!4.47e-14!39;CL:0000211!4.47e-14!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.85e-16,43;CL:0000221,3.89e-16,44;CL:0000133,3.89e-16,44;CL:0000117,6.47e-16,23;CL:0000337,6.47e-16,23;CL:0000540,2.02e-15,33;CL:0000047,2.02e-15,33;CL:0000031,2.02e-15,33;CL:0000404,2.02e-15,33;CL:0000393,3.65e-14,39;CL:0000211,3.65e-14,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.65e-18!73;UBERON:0005743!1.65e-18!73;UBERON:0000073!4.08e-18!75;UBERON:0001016!4.08e-18!75;UBERON:0002020!2.95e-13!34;UBERON:0001049!1.28e-12!52;UBERON:0005068!1.28e-12!52;UBERON:0006241!1.28e-12!52;UBERON:0007135!1.28e-12!52;UBERON:0000955!2.66e-11!50;UBERON:0006238!2.66e-11!50;UBERON:0002616!4.15e-11!49;UBERON:0004121!3.24e-10!102;UBERON:0000924!3.24e-10!102;UBERON:0006601!3.24e-10!102;UBERON:0002791!3.37e-10!29;UBERON:0003528!3.37e-10!29;UBERON:0001893!3.37e-10!29;UBERON:0002346!5.68e-09!71;UBERON:0003075!5.68e-09!71;UBERON:0007284!5.68e-09!71;UBERON:0000033!1.52e-08!63;UBERON:0002780!9.21e-08!39;UBERON:0001890!9.21e-08!39;UBERON:0006240!9.21e-08!39;UBERON:0003080!9.52e-08!40;UBERON:0000153!1.72e-07!94;UBERON:0007811!8.22e-07!86;UBERON:0003056!9.90e-07!49 | |ontology_enrichment_uberon=UBERON:0001017!1.65e-18!73;UBERON:0005743!1.65e-18!73;UBERON:0000073!4.08e-18!75;UBERON:0001016!4.08e-18!75;UBERON:0002020!2.95e-13!34;UBERON:0001049!1.28e-12!52;UBERON:0005068!1.28e-12!52;UBERON:0006241!1.28e-12!52;UBERON:0007135!1.28e-12!52;UBERON:0000955!2.66e-11!50;UBERON:0006238!2.66e-11!50;UBERON:0002616!4.15e-11!49;UBERON:0004121!3.24e-10!102;UBERON:0000924!3.24e-10!102;UBERON:0006601!3.24e-10!102;UBERON:0002791!3.37e-10!29;UBERON:0003528!3.37e-10!29;UBERON:0001893!3.37e-10!29;UBERON:0002346!5.68e-09!71;UBERON:0003075!5.68e-09!71;UBERON:0007284!5.68e-09!71;UBERON:0000033!1.52e-08!63;UBERON:0002780!9.21e-08!39;UBERON:0001890!9.21e-08!39;UBERON:0006240!9.21e-08!39;UBERON:0003080!9.52e-08!40;UBERON:0000153!1.72e-07!94;UBERON:0007811!8.22e-07!86;UBERON:0003056!9.90e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.07e-19,73;UBERON:0001016,1.04e-18,75;UBERON:0000073,1.24e-14,54;UBERON:0002020,6.01e-14,34;UBERON:0004121,1.45e-13,95;UBERON:0000924,1.45e-13,95;UBERON:0006601,1.45e-13,95;UBERON:0001049,3.36e-13,52;UBERON:0005068,3.36e-13,52;UBERON:0006241,3.36e-13,52;UBERON:0007135,3.36e-13,52;UBERON:0002346,2.97e-12,64;UBERON:0003075,2.97e-12,64;UBERON:0007284,2.97e-12,64;UBERON:0003528,9.68e-11,29;UBERON:0002791,9.68e-11,29;UBERON:0001893,9.68e-11,29;UBERON:0010371,3.68e-10,73;UBERON:0000955,3.89e-10,47;UBERON:0006238,3.89e-10,47;UBERON:0002616,6.13e-10,46;UBERON:0002780,4.08e-08,39;UBERON:0001890,4.08e-08,39;UBERON:0006240,4.08e-08,39;UBERON:0003080,4.24e-08,40;UBERON:0003056,3.70e-07,49;UBERON:0000956,9.71e-07,21;UBERON:0001869,9.71e-07,21;UBERON:0000203,9.71e-07,21 | |||
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| ||
|short_description=p3@Fam168b | |short_description=p3@Fam168b | ||
}} | }} |
Latest revision as of 02:07, 27 September 2015
Short description: | p3@Fam168b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam168b_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 65bp_to_ENSMUST00000167518, ENSMUST00000170092, NM_001160235, NM_001160236, NM_174997, uc007apj.2, uc011wje.1, uc011wjf.1_5end |
EntrezGene: | Fam168b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.85e-16 | 43 |
ectodermal cell | 3.89e-16 | 44 |
neurectodermal cell | 3.89e-16 | 44 |
CNS neuron (sensu Vertebrata) | 6.47e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.47e-16 | 23 |
neuron | 2.02e-15 | 33 |
neuronal stem cell | 2.02e-15 | 33 |
neuroblast | 2.02e-15 | 33 |
electrically signaling cell | 2.02e-15 | 33 |
electrically responsive cell | 3.65e-14 | 39 |
electrically active cell | 3.65e-14 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.07e-19 | 73 |
nervous system | 1.04e-18 | 75 |
regional part of nervous system | 1.24e-14 | 54 |
gray matter | 6.01e-14 | 34 |
ectoderm-derived structure | 1.45e-13 | 95 |
ectoderm | 1.45e-13 | 95 |
presumptive ectoderm | 1.45e-13 | 95 |
neural tube | 3.36e-13 | 52 |
neural rod | 3.36e-13 | 52 |
future spinal cord | 3.36e-13 | 52 |
neural keel | 3.36e-13 | 52 |
neurectoderm | 2.97e-12 | 64 |
neural plate | 2.97e-12 | 64 |
presumptive neural plate | 2.97e-12 | 64 |
brain grey matter | 9.68e-11 | 29 |
regional part of telencephalon | 9.68e-11 | 29 |
telencephalon | 9.68e-11 | 29 |
ecto-epithelium | 3.68e-10 | 73 |
brain | 3.89e-10 | 47 |
future brain | 3.89e-10 | 47 |
regional part of brain | 6.13e-10 | 46 |
regional part of forebrain | 4.08e-08 | 39 |
forebrain | 4.08e-08 | 39 |
future forebrain | 4.08e-08 | 39 |
anterior neural tube | 4.24e-08 | 40 |
pre-chordal neural plate | 3.70e-07 | 49 |
cerebral cortex | 9.71e-07 | 21 |
cerebral hemisphere | 9.71e-07 | 21 |
pallium | 9.71e-07 | 21 |