FFCP PHASE1:Mm9::chr7:88005795..88005858,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:88005795..88005858,+ to FFCP PHASE1:Mm9::chr7:88005795..88005858,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22691 | |EntrezGene=22691 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=D3YYN4,D3YTK9 | |UniProt=D3YYN4,D3YTK9 | ||
|association_with_transcript=0bp_to_ENSMUST00000132163,ENSMUST00000147125_5end | |||
|cluster_id=chr7:88005795..88005858,+ | |||
|description=CAGE_peak_1_at_Zscan2_5end | |||
|id=chr7:88005795..88005858,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.11e-09!33;CL:0000047!3.11e-09!33;CL:0000031!3.11e-09!33;CL:0000404!3.11e-09!33;CL:0000117!1.01e-08!23;CL:0000337!1.01e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.11e-09,33;CL:0000047,3.11e-09,33;CL:0000031,3.11e-09,33;CL:0000404,3.11e-09,33;CL:0000117,1.01e-08,23;CL:0000337,1.01e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.06e-13!94;UBERON:0007811!5.83e-12!86;UBERON:0003056!6.13e-10!49;UBERON:0001017!1.97e-09!73;UBERON:0005743!1.97e-09!73;UBERON:0000033!2.17e-09!63;UBERON:0002346!1.33e-08!71;UBERON:0003075!1.33e-08!71;UBERON:0007284!1.33e-08!71;UBERON:0000073!2.12e-08!75;UBERON:0001016!2.12e-08!75;UBERON:0000955!5.00e-08!50;UBERON:0006238!5.00e-08!50;UBERON:0003080!9.58e-08!40;UBERON:0002616!1.14e-07!49;UBERON:0002780!1.48e-07!39;UBERON:0001890!1.48e-07!39;UBERON:0006240!1.48e-07!39;UBERON:0001049!1.60e-07!52;UBERON:0005068!1.60e-07!52;UBERON:0006241!1.60e-07!52;UBERON:0007135!1.60e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,6.12e-10,49;UBERON:0001017,1.91e-09,73;UBERON:0002346,2.00e-09,64;UBERON:0003075,2.00e-09,64;UBERON:0007284,2.00e-09,64;UBERON:0001016,2.05e-08,75;UBERON:0010314,2.57e-08,92;UBERON:0000073,3.23e-08,54;UBERON:0003080,9.57e-08,40;UBERON:0000955,1.06e-07,47;UBERON:0006238,1.06e-07,47;UBERON:0002780,1.47e-07,39;UBERON:0001890,1.47e-07,39;UBERON:0006240,1.47e-07,39;UBERON:0001049,1.60e-07,52;UBERON:0005068,1.60e-07,52;UBERON:0006241,1.60e-07,52;UBERON:0007135,1.60e-07,52;UBERON:0002616,2.42e-07,46;UBERON:0004121,6.08e-07,95;UBERON:0000924,6.08e-07,95;UBERON:0006601,6.08e-07,95 | |||
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|short_description=p1@Zscan2 | |||
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Latest revision as of 03:58, 27 September 2015
Short description: | p1@Zscan2 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zscan2_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 0bp_to_ENSMUST00000132163, ENSMUST00000147125_5end |
EntrezGene: | Zscan2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuron | 3.11e-09 | 33 |
neuronal stem cell | 3.11e-09 | 33 |
neuroblast | 3.11e-09 | 33 |
electrically signaling cell | 3.11e-09 | 33 |
CNS neuron (sensu Vertebrata) | 1.01e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 6.12e-10 | 49 |
central nervous system | 1.91e-09 | 73 |
neurectoderm | 2.00e-09 | 64 |
neural plate | 2.00e-09 | 64 |
presumptive neural plate | 2.00e-09 | 64 |
nervous system | 2.05e-08 | 75 |
structure with developmental contribution from neural crest | 2.57e-08 | 92 |
regional part of nervous system | 3.23e-08 | 54 |
anterior neural tube | 9.57e-08 | 40 |
brain | 1.06e-07 | 47 |
future brain | 1.06e-07 | 47 |
regional part of forebrain | 1.47e-07 | 39 |
forebrain | 1.47e-07 | 39 |
future forebrain | 1.47e-07 | 39 |
neural tube | 1.60e-07 | 52 |
neural rod | 1.60e-07 | 52 |
future spinal cord | 1.60e-07 | 52 |
neural keel | 1.60e-07 | 52 |
regional part of brain | 2.42e-07 | 46 |
ectoderm-derived structure | 6.08e-07 | 95 |
ectoderm | 6.08e-07 | 95 |
presumptive ectoderm | 6.08e-07 | 95 |