FFCP PHASE1:Mm9::chr18:38456378..38456388,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56736 | |EntrezGene=56736 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9QM86,Q9JI90 | |UniProt=E9QM86,Q9JI90 | ||
|association_with_transcript=13bp_to_ENSMUST00000115589_5end | |association_with_transcript=13bp_to_ENSMUST00000115589_5end | ||
|cluster_id=chr18:38456378..38456388,+ | |||
|description=CAGE_peak_2_at_Rnf14_5end | |description=CAGE_peak_2_at_Rnf14_5end | ||
|id=chr18:38456378..38456388,+ | |id=chr18:38456378..38456388,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.36e-10!52;UBERON:0005068!9.36e-10!52;UBERON:0006241!9.36e-10!52;UBERON:0007135!9.36e-10!52;UBERON:0002346!1.72e-09!71;UBERON:0003075!1.72e-09!71;UBERON:0007284!1.72e-09!71;UBERON:0000033!5.92e-09!63;UBERON:0000955!2.36e-08!50;UBERON:0006238!2.36e-08!50;UBERON:0003056!2.74e-08!49;UBERON:0004111!3.71e-08!122;UBERON:0000025!3.79e-08!114;UBERON:0002616!5.36e-08!49;UBERON:0000073!1.75e-07!75;UBERON:0001016!1.75e-07!75;UBERON:0003080!1.88e-07!40;UBERON:0001017!2.32e-07!73;UBERON:0005743!2.32e-07!73;UBERON:0004121!4.05e-07!102;UBERON:0000924!4.05e-07!102;UBERON:0006601!4.05e-07!102;UBERON:0002780!6.23e-07!39;UBERON:0001890!6.23e-07!39;UBERON:0006240!6.23e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.22e-12,92;UBERON:0002346,3.68e-12,64;UBERON:0003075,3.68e-12,64;UBERON:0007284,3.68e-12,64;UBERON:0001049,1.29e-10,52;UBERON:0005068,1.29e-10,52;UBERON:0006241,1.29e-10,52;UBERON:0007135,1.29e-10,52;UBERON:0000073,1.57e-10,54;UBERON:0010371,3.25e-10,73;UBERON:0001016,5.79e-09,75;UBERON:0001017,7.81e-09,73;UBERON:0004121,7.98e-09,95;UBERON:0000924,7.98e-09,95;UBERON:0006601,7.98e-09,95;UBERON:0004111,1.03e-08,122;UBERON:0000025,1.04e-08,114;UBERON:0000955,1.27e-08,47;UBERON:0006238,1.27e-08,47;UBERON:0003056,1.51e-08,49;UBERON:0002616,3.06e-08,46;UBERON:0003080,1.23e-07,40;UBERON:0002780,4.40e-07,39;UBERON:0001890,4.40e-07,39;UBERON:0006240,4.40e-07,39;UBERON:0002021,4.45e-07,10;UBERON:0000411,4.45e-07,10;UBERON:0001950,4.45e-07,10 | |||
|phase1_expression=1.12104192973356,1.74487703819681,0.454999239389536,0.90739263392049,0,1.00727563147134,0.467225281191051,1.16210991097419,0.422366166455,0.468129052643987,0.68487187290202,0.398860794976682,0.856003649656029,0.262261207256992,0.666219523631325,0.809901069559304,0,1.10411757875383,0.411343300817216,0.84877930359606,1.7008658030214,1.48936426801328,0.522399578277871,0.95995453676044,0.45881856213434,0,1.29228598847722,1.29282739611533,1.71021077510736,0.504060259519861,1.99557459589774,0,0.61506478758457,0,0.577703239502549,0,1.02084678131185,3.34825304589526,4.6880120671428,1.57057123192139,5.88231488031014,0,3.88408282424923,1.00717454380462,0.608261587317087,1.65192076945513,0,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0.671130424230945,1.45072428402269,0.672187598284928,0.771778308107841,0.286533439938757,1.54701627683233,1.82084814773638,0.528990979272033,0,1.0165335962074,0,0,0,0,0,0,0.622137673850866,0.810035629990144,0.630974884054146,2.85650984403804,1.54607978666129,0.734944795289724,0.766763768145891,0,1.10115880999389,2.29837208553338,1.68967186581868,1.71452174049252,1.73826522844578,2.08365348222704,1.67509799400829,1.68828783009504,2.13917546887534,2.06240009831567,2.27794689278565,2.79599168737951,1.28734528666413,1.43585964202892,0,0,0,0,0,0.448026887097336,1.54488862144927,1.36344258062446,0.519572009205738,0.70667914902068,1.12674735821344,0,0,0,1.08245520505607,0.506719730950197,0.505524445014783,0.68510327831436,1.55362730188303,0.890652834388949,0.346970653532272,0.913396434936424,0.691846491768175,0.753613202763113,1.17588707135705,1.50799909595611,1.48316980640624,2.02439099687876,0,0.970601099684455,1.32504911076236,1.93950101254089,0,2.04946557908083,2.30391377494801,3.0654846625031,0.599075622529601,0,0.635351135365324,5.39246301857362,3.20250421973039,1.13088916901578,4.69325664519146,5.11430914660661,4.57133698031032,4.86723789203273,1.42575109390443,1.49288364732112,1.26361379216837,2.31486041475121,1.04096354370163,1.60931473103431,1.26043490863744,1.35634336052144,2.10913147369116,1.15302348256365,1.03071897015702,2.84573707812917,0.862271971731369,1.70195472151037,1.40760899331159,1.97276159184817,1.11218899690239,0.348252166522167,0.411564272815887,1.39323986772945,0.702213187313235,0.257347907114715,1.13665399758237,1.03562886267751,2.11073453982987,1.44049649168812,1.89395788468168,1.57411385397923,2.31400669331067,1.62773761325285,1.3413670069981,1.98501082024188,3.29119699826961,2.79084688934462,2.10778904819225,2.33919979880532,2.19550115291051,1.34206418760372,3.99550902271842,1.44066457330998,0.660837565967596,0.528901133327089,0.426576501070468,0.696710015581316,1.28867461322093,1.00841762311671,1.11189021922435,2.09248188723815,1.89811624617805,1.81168850196412,1.25667604400135,0.994782360205754,2.33956904542944,0,1.51296634912286,1.59313018603494,0.758671603812327,1.14248512609729,1.1270773567308,0.203651327845314,1.35766741017338,1.75339549725796,2.46622494784603,2.06654207171443,2.98297582898612,2.46794327843601,1.1858105083486,1.00107063429656,0.196558995113203,1.34917267430912,0.405720242777006,1.20588579876208,0.763877555344259,1.43848068725405,0.648540907100142,0.823684239564244,2.87536413054709,1.48856379067401,0.936113019343682,1.76805214562978,0.896987067609561,1.92977408545347,1.66277871149944,0.947457058852424,0.814824882210129,0.678980343100753,0.469380496577004,1.17254380209271,1.19021820443007,1.75620283072019,1.89162172927429,1.10732344824387,0.797273843287435,1.3109065177259,1.72684981865896,1.88043776155965,0,1.08781136763742,3.44234991113325,1.10374698521893,2.24770825982909,5.15731421005694,0.983609672260053,1.76729649043061,1.26203287766503,2.34263246577983,1.50796378412959,0.238968797952552,1.33679204449436,1.41538265394416,1.21443210502468,0.876767573733936,2.37172666767914,2.24924921495265,1.27746076687442,0.712262414669021,0.488660878060728,1.15479086080775,1.32745138339963,0.485561272309963,0,0.754420319023592,0.295301892880773,0,1.29214146584111,2.54473610634254,1.42598951353889,1.8962205476149,3.16255825724996,1.03135543248187,5.10659408630682,1.44048875225048,0.646793418913773,1.71469628025274,1.77340233642274,1.96205699362278,2.63278432963394,1.8267896946876,2.11204537257339,3.60114520468494,0.441056796109924,0.8244312647074,0.968786560175433,1.14594557363496,0.835606408021955,0.820704498725306,1.45740418314925,4.45020724825223,0.512612642393558,0.619160603889667,0.185194527369712,0.753473828018764,1.36694227721025,0.915112692826091,1.35982743995084,1.39951452323658,2.21119958087078,2.86401185404534,1.58167996790568,0.813277868507395,0.648032044930808,1.04544148007234,0.87345025498471,2.15782954215713,0.991841468704031,1.04702376793612,0.648074866458964,1.86401793926078,0,1.19613236835183,1.15820943319968,0.972255941720238,1.16243841129958,1.01373675294467,0.821500670520278,1.43224823328345,1.57289016638566,0.483168241652012,0.576060012515731,0.316011120628178,0.608175645870493,0.616265742988964,0.51968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|phase1_expression=1.12104192973356,1.74487703819681,0.454999239389536,0.90739263392049,0,1.00727563147134,0.467225281191051,1.16210991097419,0.422366166455,0.468129052643987,0.68487187290202,0.398860794976682,0.856003649656029,0.262261207256992,0.666219523631325,0.809901069559304,0,1.10411757875383,0.411343300817216,0.84877930359606,1.7008658030214,1.48936426801328,0.522399578277871,0.95995453676044,0.45881856213434,0,1.29228598847722,1.29282739611533,1.71021077510736,0.504060259519861,1.99557459589774,0,0.61506478758457,0,0.577703239502549,0,1.02084678131185,3.34825304589526,4.6880120671428,1.57057123192139,5.88231488031014,0,3.88408282424923,1.00717454380462,0.608261587317087,1.65192076945513,0,0,0.659058548203415,0.194429899074283,0.139986421625363,0,0.671130424230945,1.45072428402269,0.672187598284928,0.771778308107841,0.286533439938757,1.54701627683233,1.82084814773638,0.528990979272033,0,1.0165335962074,0,0,0,0,0,0,0.622137673850866,0.810035629990144,0.630974884054146,2.85650984403804,1.54607978666129,0.734944795289724,0.766763768145891,0,1.10115880999389,2.29837208553338,1.68967186581868,1.71452174049252,1.73826522844578,2.08365348222704,1.67509799400829,1.68828783009504,2.13917546887534,2.06240009831567,2.27794689278565,2.79599168737951,1.28734528666413,1.43585964202892,0,0,0,0,0,0.448026887097336,1.54488862144927,1.36344258062446,0.519572009205738,0.70667914902068,1.12674735821344,0,0,0,1.08245520505607,0.506719730950197,0.505524445014783,0.68510327831436,1.55362730188303,0.890652834388949,0.346970653532272,0.913396434936424,0.691846491768175,0.753613202763113,1.17588707135705,1.50799909595611,1.48316980640624,2.02439099687876,0,0.970601099684455,1.32504911076236,1.93950101254089,0,2.04946557908083,2.30391377494801,3.0654846625031,0.599075622529601,0,0.635351135365324,5.39246301857362,3.20250421973039,1.13088916901578,4.69325664519146,5.11430914660661,4.57133698031032,4.86723789203273,1.42575109390443,1.49288364732112,1.26361379216837,2.31486041475121,1.04096354370163,1.60931473103431,1.26043490863744,1.35634336052144,2.10913147369116,1.15302348256365,1.03071897015702,2.84573707812917,0.862271971731369,1.70195472151037,1.40760899331159,1.97276159184817,1.11218899690239,0.348252166522167,0.411564272815887,1.39323986772945,0.702213187313235,0.257347907114715,1.13665399758237,1.03562886267751,2.11073453982987,1.44049649168812,1.89395788468168,1.57411385397923,2.31400669331067,1.62773761325285,1.3413670069981,1.98501082024188,3.29119699826961,2.79084688934462,2.10778904819225,2.33919979880532,2.19550115291051,1.34206418760372,3.99550902271842,1.44066457330998,0.660837565967596,0.528901133327089,0.426576501070468,0.696710015581316,1.28867461322093,1.00841762311671,1.11189021922435,2.09248188723815,1.89811624617805,1.81168850196412,1.25667604400135,0.994782360205754,2.33956904542944,0,1.51296634912286,1.59313018603494,0.758671603812327,1.14248512609729,1.1270773567308,0.203651327845314,1.35766741017338,1.75339549725796,2.46622494784603,2.06654207171443,2.98297582898612,2.46794327843601,1.1858105083486,1.00107063429656,0.196558995113203,1.34917267430912,0.405720242777006,1.20588579876208,0.763877555344259,1.43848068725405,0.648540907100142,0.823684239564244,2.87536413054709,1.48856379067401,0.936113019343682,1.76805214562978,0.896987067609561,1.92977408545347,1.66277871149944,0.947457058852424,0.814824882210129,0.678980343100753,0.469380496577004,1.17254380209271,1.19021820443007,1.75620283072019,1.89162172927429,1.10732344824387,0.797273843287435,1.3109065177259,1.72684981865896,1.88043776155965,0,1.08781136763742,3.44234991113325,1.10374698521893,2.24770825982909,5.15731421005694,0.983609672260053,1.76729649043061,1.26203287766503,2.34263246577983,1.50796378412959,0.238968797952552,1.33679204449436,1.41538265394416,1.21443210502468,0.876767573733936,2.37172666767914,2.24924921495265,1.27746076687442,0.712262414669021,0.488660878060728,1.15479086080775,1.32745138339963,0.485561272309963,0,0.754420319023592,0.295301892880773,0,1.29214146584111,2.54473610634254,1.42598951353889,1.8962205476149,3.16255825724996,1.03135543248187,5.10659408630682,1.44048875225048,0.646793418913773,1.71469628025274,1.77340233642274,1.96205699362278,2.63278432963394,1.8267896946876,2.11204537257339,3.60114520468494,0.441056796109924,0.8244312647074,0.968786560175433,1.14594557363496,0.835606408021955,0.820704498725306,1.45740418314925,4.45020724825223,0.512612642393558,0.619160603889667,0.185194527369712,0.753473828018764,1.36694227721025,0.915112692826091,1.35982743995084,1.39951452323658,2.21119958087078,2.86401185404534,1.58167996790568,0.813277868507395,0.648032044930808,1.04544148007234,0.87345025498471,2.15782954215713,0.991841468704031,1.04702376793612,0.648074866458964,1.86401793926078,0,1.19613236835183,1.15820943319968,0.972255941720238,1.16243841129958,1.01373675294467,0.821500670520278,1.43224823328345,1.57289016638566,0.483168241652012,0.576060012515731,0.316011120628178,0.608175645870493,0.616265742988964,0.51968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| ||
|short_description=p2@Rnf14 | |short_description=p2@Rnf14 | ||
}} | }} |
Latest revision as of 06:16, 27 September 2015
Short description: | p2@Rnf14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rnf14_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENSMUST00000115589_5end |
EntrezGene: | Rnf14 |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.22e-12 | 92 |
neurectoderm | 3.68e-12 | 64 |
neural plate | 3.68e-12 | 64 |
presumptive neural plate | 3.68e-12 | 64 |
neural tube | 1.29e-10 | 52 |
neural rod | 1.29e-10 | 52 |
future spinal cord | 1.29e-10 | 52 |
neural keel | 1.29e-10 | 52 |
regional part of nervous system | 1.57e-10 | 54 |
ecto-epithelium | 3.25e-10 | 73 |
nervous system | 5.79e-09 | 75 |
central nervous system | 7.81e-09 | 73 |
ectoderm-derived structure | 7.98e-09 | 95 |
ectoderm | 7.98e-09 | 95 |
presumptive ectoderm | 7.98e-09 | 95 |
anatomical conduit | 1.03e-08 | 122 |
tube | 1.04e-08 | 114 |
brain | 1.27e-08 | 47 |
future brain | 1.27e-08 | 47 |
pre-chordal neural plate | 1.51e-08 | 49 |
regional part of brain | 3.06e-08 | 46 |
anterior neural tube | 1.23e-07 | 40 |
regional part of forebrain | 4.40e-07 | 39 |
forebrain | 4.40e-07 | 39 |
future forebrain | 4.40e-07 | 39 |
occipital lobe | 4.45e-07 | 10 |
visual cortex | 4.45e-07 | 10 |
neocortex | 4.45e-07 | 10 |