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FFCP PHASE1:Mm9::chr1:60803273..60803321,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:60803273..60803321,+
|DHSsupport=NA
|short_description=p2@Cd28,p2@LOC100048845
|DPIdataset=NA
|description=CAGE_peak_2_at_Cd28_5end,CAGE_peak_2_at_LOC100048845_5end
|association_with_transcript=27bp_to_ENSMUST00000153207_5end
|EntrezGene=100048845,12487
|EntrezGene=100048845,12487
|HGNC=
|HGNC=
|MCL_coexpression_id=118
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=27bp_to_ENSMUST00000153207_5end
|cluster_id=chr1:60803273..60803321,+
|description=CAGE_peak_2_at_Cd28_5end,CAGE_peak_2_at_LOC100048845_5end
|id=chr1:60803273..60803321,+
|ontology_enrichment_celltype=CL:0000988!1.06e-12!32;CL:0002032!1.06e-12!32;CL:0000037!1.06e-12!32;CL:0000566!1.06e-12!32;CL:0000837!1.06e-12!32;CL:0000838!5.08e-11!12;CL:0000084!5.17e-11!11;CL:0000827!5.17e-11!11;CL:0002031!6.23e-10!25;CL:0000542!8.78e-10!13;CL:0000051!8.78e-10!13;CL:0000791!1.35e-09!9;CL:0000789!1.35e-09!9;CL:0002420!1.35e-09!9;CL:0002419!1.35e-09!9;CL:0000790!1.35e-09!9;CL:0000738!3.49e-09!17;CL:0002087!3.49e-09!17;CL:0000624!1.07e-08!8;CL:0002320!1.17e-07!46;CL:0000134!1.17e-07!46;CL:0000893!7.18e-07!6;CL:0002489!7.18e-07!6;CL:0000898!7.18e-07!6;CL:0000809!7.18e-07!6;CL:0000810!7.18e-07!6;CL:0000895!7.18e-07!6;CL:0000808!7.18e-07!6;CL:0000894!7.18e-07!6;CL:0000806!7.18e-07!6;CL:0000807!7.18e-07!6;CL:0000805!7.18e-07!6;CL:0002425!7.18e-07!6;CL:0002436!7.18e-07!6;CL:0002427!7.18e-07!6;CL:0002428!7.18e-07!6;CL:0002429!7.18e-07!6;CL:0002433!7.18e-07!6;CL:0002431!7.18e-07!6;CL:0002432!7.18e-07!6
|ontology_enrichment_celltype_v019_2=CL:0000084,6.85e-22,11;CL:0000827,6.85e-22,11;CL:0000988,8.62e-22,32;CL:0002032,8.62e-22,32;CL:0000037,8.62e-22,32;CL:0000837,8.62e-22,32;CL:0000838,7.89e-20,12;CL:0002031,2.25e-19,25;CL:0000791,7.76e-19,9;CL:0000789,7.76e-19,9;CL:0002420,7.76e-19,9;CL:0002419,7.76e-19,9;CL:0000790,7.76e-19,9;CL:0000738,3.26e-18,17;CL:0002087,3.26e-18,17;CL:0000542,4.37e-18,13;CL:0000051,4.37e-18,13;CL:0000624,6.67e-17,8;CL:0002320,1.53e-16,46;CL:0000134,1.53e-16,46;CL:0000219,3.29e-13,54;CL:0000893,5.43e-13,6;CL:0002489,5.43e-13,6;CL:0000898,5.43e-13,6;CL:0000809,5.43e-13,6;CL:0000810,5.43e-13,6;CL:0000895,5.43e-13,6;CL:0000808,5.43e-13,6;CL:0000894,5.43e-13,6;CL:0000806,5.43e-13,6;CL:0000807,5.43e-13,6;CL:0000805,5.43e-13,6;CL:0002425,5.43e-13,6;CL:0002436,5.43e-13,6;CL:0002427,5.43e-13,6;CL:0002428,5.43e-13,6;CL:0002429,5.43e-13,6;CL:0002433,5.43e-13,6;CL:0002431,5.43e-13,6;CL:0002432,5.43e-13,6;CL:0000049,3.31e-07,19;CL:0000034,4.88e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!9.54e-21!45;UBERON:0003061!9.54e-21!45;UBERON:0002193!5.59e-20!48;UBERON:0004177!3.27e-16!29;UBERON:0003081!4.41e-13!88;UBERON:0002370!5.08e-13!23;UBERON:0000974!5.08e-13!23;UBERON:0004807!5.08e-13!23;UBERON:0005058!5.08e-13!23;UBERON:0003351!5.08e-13!23;UBERON:0009113!5.08e-13!23;UBERON:0003295!5.08e-13!23;UBERON:0009722!5.08e-13!23;UBERON:0005562!5.08e-13!23;UBERON:0007690!5.08e-13!23;UBERON:0006562!4.01e-12!24;UBERON:0003408!4.01e-12!24;UBERON:0001557!4.01e-12!24;UBERON:0001042!4.01e-12!24;UBERON:0008814!4.01e-12!24;UBERON:0009145!4.01e-12!24;UBERON:0000065!3.16e-11!41;UBERON:0001004!1.07e-10!42;UBERON:0002405!3.12e-10!70;UBERON:0000072!7.30e-10!27;UBERON:0002384!1.17e-07!46
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.48e-35,45;UBERON:0003061,7.48e-35,45;UBERON:0002193,1.15e-34,48;UBERON:0002405,1.15e-34,48;UBERON:0004177,3.82e-29,29;UBERON:0005057,3.82e-29,29;UBERON:0002370,5.89e-29,23;UBERON:0000974,5.89e-29,23;UBERON:0004807,5.89e-29,23;UBERON:0005058,5.89e-29,23;UBERON:0003351,5.89e-29,23;UBERON:0009113,5.89e-29,23;UBERON:0003295,5.89e-29,23;UBERON:0009722,5.89e-29,23;UBERON:0005562,5.89e-29,23;UBERON:0007690,5.89e-29,23;UBERON:0006562,1.59e-27,24;UBERON:0003408,1.59e-27,24;UBERON:0001557,1.59e-27,24;UBERON:0001042,1.59e-27,24;UBERON:0008814,1.59e-27,24;UBERON:0009145,1.59e-27,24;UBERON:0000077,3.35e-25,35;UBERON:0000072,7.25e-24,27;UBERON:0000065,4.25e-17,41;UBERON:0007811,1.43e-16,36;UBERON:0001004,1.49e-16,42;UBERON:0002384,1.53e-16,46;UBERON:0003081,2.96e-15,87;UBERON:0000153,4.97e-13,43;UBERON:0000926,1.23e-09,120;UBERON:0004120,1.23e-09,120;UBERON:0006603,1.23e-09,120;UBERON:0003929,4.26e-09,55;UBERON:0001041,1.69e-08,80;UBERON:0002368,6.15e-08,60;UBERON:0005911,6.23e-08,69;UBERON:0002371,2.83e-07,16;UBERON:0002530,5.76e-07,65;UBERON:0000490,8.63e-07,66
|phase1_expression=0,0,0,0,0,0,0,63.0121818394892,64.9036009119184,51.4941957908386,19.3476304094821,14.2792164601652,64.885076643927,56.9981023771863,0.666219523631325,1.01237633694913,0,5.99378114180652,5.34746291062381,3.39511721438424,1.27564935226605,8.83689465687879,4.70159620450084,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,43.5217285206807,44.3643814868052,0,0,0,0,0,0,0,0,1.7997994345628,4.94433181283487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.48439043634778,15.5362730188303,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0,0.510914110417183,2.63593273913025,1.19980546198682,2.92261522268049,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0.702213187313235,0.772043721344145,1.13665399758237,0,0,0,0,0,0,0,0,0.467061369468678,0,0.32833492815819,0.0810688095458557,0.292399974850665,0,0.402619256281115,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.493588655687202,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,3.32555742299888,0,0,0,0,0.502518772325447,0,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,1.14704320301017,0.518054945597687,0.867894351489069,10.5553898757491,1.63171705145613,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0,1.17335854031855,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,0,2.56306321196779,0.206386867963223,0.370389054739423,0.941842285023455,1.50363650493128,1.37266903923914,8.15896463970505,8.95689294871411,9.81219814011409,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,35.393245510356,0,1.74608627180206,8.57477431653447,13.2479754793936,19.2720914137827,15.9859947861559,20.3811547500917,20.9000551392666,19.432735697025,23.4925011368838,29.8221115063642,29.8256709085021,46.7507608726276,0,0,0,0,0,1.12609485270709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0,0.114870937911227,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0
|phase1_expression=0,0,0,0,0,0,0,63.0121818394892,64.9036009119184,51.4941957908386,19.3476304094821,14.2792164601652,64.885076643927,56.9981023771863,0.666219523631325,1.01237633694913,0,5.99378114180652,5.34746291062381,3.39511721438424,1.27564935226605,8.83689465687879,4.70159620450084,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.167782606057736,43.5217285206807,44.3643814868052,0,0,0,0,0,0,0,0,1.7997994345628,4.94433181283487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.48439043634778,15.5362730188303,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0,0.510914110417183,2.63593273913025,1.19980546198682,2.92261522268049,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0.702213187313235,0.772043721344145,1.13665399758237,0,0,0,0,0,0,0,0,0.467061369468678,0,0.32833492815819,0.0810688095458557,0.292399974850665,0,0.402619256281115,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.493588655687202,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,3.32555742299888,0,0,0,0,0.502518772325447,0,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,1.14704320301017,0.518054945597687,0.867894351489069,10.5553898757491,1.63171705145613,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0.164549020602121,0,1.17335854031855,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,0,2.56306321196779,0.206386867963223,0.370389054739423,0.941842285023455,1.50363650493128,1.37266903923914,8.15896463970505,8.95689294871411,9.81219814011409,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,0,0,0,0,35.393245510356,0,1.74608627180206,8.57477431653447,13.2479754793936,19.2720914137827,15.9859947861559,20.3811547500917,20.9000551392666,19.432735697025,23.4925011368838,29.8221115063642,29.8256709085021,46.7507608726276,0,0,0,0,0,1.12609485270709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0,0.114870937911227,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0
|short_description=p2@Cd28,p2@LOC100048845
}}
}}

Latest revision as of 07:02, 27 September 2015

Short description:p2@Cd28, p2@LOC100048845
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cd28_5end, CAGE_peak_2_at_LOC100048845_5end
Coexpression cluster:MCL_coexpression_mm9:118
Association with transcript: 27bp_to_ENSMUST00000153207_5end
EntrezGene:100048845,12487
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cd28p2@LOC100048845

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E963.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E764.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F251.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E619.35
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F114.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E464.89
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E857.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.99
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.35
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I943.52
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A144.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H915.54
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.81
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B535.39
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C58.57
thymus, embryo E17.CNhs10581.478-18C113.25
thymus, embryo E18.CNhs10595.1273-19G419.27
thymus, neonate N02.CNhs11181.1541-43F815.99
thymus, neonate N03.CNhs11137.2104-43C720.38
thymus, neonate N06.CNhs11197.681-26C420.90
thymus, neonate N07.CNhs11211.713-19D319.43
thymus, neonate N10.CNhs11194.748-24E423.49
thymus, neonate N20.CNhs11186.820-7A229.82
thymus, neonate N25.CNhs11125.1362-25G729.83
thymus, neonate N30.CNhs11132.1393-42G246.75
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell6.85e-2211
pro-T cell6.85e-2211
hematopoietic cell8.62e-2232
hematopoietic oligopotent progenitor cell8.62e-2232
hematopoietic stem cell8.62e-2232
hematopoietic multipotent progenitor cell8.62e-2232
lymphoid lineage restricted progenitor cell7.89e-2012
hematopoietic lineage restricted progenitor cell2.25e-1925
mature alpha-beta T cell7.76e-199
alpha-beta T cell7.76e-199
immature T cell7.76e-199
mature T cell7.76e-199
immature alpha-beta T cell7.76e-199
leukocyte3.26e-1817
nongranular leukocyte3.26e-1817
lymphocyte4.37e-1813
common lymphoid progenitor4.37e-1813
CD4-positive, alpha-beta T cell6.67e-178
connective tissue cell1.53e-1646
mesenchymal cell1.53e-1646
motile cell3.29e-1354
thymocyte5.43e-136
double negative thymocyte5.43e-136
naive T cell5.43e-136
double-positive, alpha-beta thymocyte5.43e-136
CD4-positive, alpha-beta thymocyte5.43e-136
naive thymus-derived CD4-positive, alpha-beta T cell5.43e-136
DN4 thymocyte5.43e-136
DN1 thymic pro-T cell5.43e-136
DN2 thymocyte5.43e-136
DN3 thymocyte5.43e-136
immature single positive thymocyte5.43e-136
early T lineage precursor5.43e-136
mature CD4 single-positive thymocyte5.43e-136
resting double-positive thymocyte5.43e-136
double-positive blast5.43e-136
CD69-positive double-positive thymocyte5.43e-136
CD69-positive, CD4-positive single-positive thymocyte5.43e-136
CD4-positive, CD8-intermediate double-positive thymocyte5.43e-136
CD24-positive, CD4 single-positive thymocyte5.43e-136
common myeloid progenitor3.31e-0719
stem cell4.88e-0797

Uber anatomy
Ontology termp-valuen
hematopoietic system7.48e-3545
blood island7.48e-3545
hemolymphoid system1.15e-3448
immune system1.15e-3448
hemopoietic organ3.82e-2929
immune organ3.82e-2929
thymus5.89e-2923
neck5.89e-2923
respiratory system epithelium5.89e-2923
hemolymphoid system gland5.89e-2923
pharyngeal epithelium5.89e-2923
thymic region5.89e-2923
pharyngeal gland5.89e-2923
entire pharyngeal arch endoderm5.89e-2923
thymus primordium5.89e-2923
early pharyngeal endoderm5.89e-2923
pharynx1.59e-2724
gland of gut1.59e-2724
upper respiratory tract1.59e-2724
chordate pharynx1.59e-2724
pharyngeal arch system1.59e-2724
pharyngeal region of foregut1.59e-2724
mixed endoderm/mesoderm-derived structure3.35e-2535
segment of respiratory tract7.25e-2427
respiratory tract4.25e-1741
craniocervical region1.43e-1636
respiratory system1.49e-1642
connective tissue1.53e-1646
lateral plate mesoderm2.96e-1587
anterior region of body4.97e-1343
mesoderm1.23e-09120
mesoderm-derived structure1.23e-09120
presumptive mesoderm1.23e-09120
gut epithelium4.26e-0955
foregut1.69e-0880
endocrine gland6.15e-0860
endo-epithelium6.23e-0869
bone marrow2.83e-0716
gland5.76e-0765
unilaminar epithelium8.63e-0766
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