FFCP PHASE1:Mm9::chr6:48658205..48658251,-: Difference between revisions
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{{FFCP|EntrezGene=231931|HGNC=|MCL_coexpression_id=122|UniProt=Q8K349,D3Z3H3|association_with_transcript=0bp_to_ENSMUST00000053661,ENSMUST00000119315,NM_153175,uc009bvm.1,uc009bvn.1_5end|description=CAGE_peak_1_at_Gimap6_5end|id=chr6:48658205..48658251,-|ontology_enrichment_celltype=CL:0000838!1.57e-08!12;CL:0000084!6.90e-08!11;CL:0000827!6.90e-08!11;CL:0000542!1.08e-07!13;CL:0000051!1.08e-07!13;CL:0000791!2.23e-07!9;CL:0000789!2.23e-07!9;CL:0002420!2.23e-07!9;CL:0002419!2.23e-07!9;CL:0000790!2.23e-07!9|ontology_enrichment_celltype_v019_2=CL:0000838,1.47e-08,12;CL:0000084,6.51e-08,11;CL:0000827,6.51e-08,11;CL:0000542,1.02e-07,13;CL:0000051,1.02e-07,13;CL:0000791,2.11e-07,9;CL:0000789,2.11e-07,9;CL:0002420,2.11e-07,9;CL:0002419,2.11e-07,9;CL:0000790,2.11e-07,9;CL:0000624,9.57e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.53e-13!193;UBERON:0004120!1.53e-13!193;UBERON:0006603!1.53e-13!193;UBERON:0003104!1.20e-10!131;UBERON:0009142!1.20e-10!131;UBERON:0004177!2.06e-10!29;UBERON:0001048!2.53e-10!147;UBERON:0001004!2.69e-10!42;UBERON:0000065!4.01e-10!41;UBERON:0001041!4.57e-10!92;UBERON:0003081!1.04e-09!88;UBERON:0005057!2.25e-09!51;UBERON:0000077!2.54e-09!97;UBERON:0009569!9.82e-09!66;UBERON:0003408!1.81e-08!24;UBERON:0002370!2.51e-08!23;UBERON:0000974!2.51e-08!23;UBERON:0004807!2.51e-08!23;UBERON:0005058!2.51e-08!23;UBERON:0003351!2.51e-08!23;UBERON:0009113!2.51e-08!23;UBERON:0003295!2.51e-08!23;UBERON:0009722!2.51e-08!23;UBERON:0005562!2.51e-08!23;UBERON:0007690!2.51e-08!23;UBERON:0006562!3.24e-08!24;UBERON:0001557!3.24e-08!24;UBERON:0001042!3.24e-08!24;UBERON:0008814!3.24e-08!24;UBERON:0009145!3.24e-08!24;UBERON:0002405!3.28e-08!70;UBERON:0002193!6.34e-08!48;UBERON:0002368!9.83e-08!60;UBERON:0002530!1.55e-07!65;UBERON:0000949!2.20e-07!72;UBERON:0002390!8.68e-07!45;UBERON:0003061!8.68e-07!45;UBERON:0005177!8.72e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0001041,1.25e-10,80;UBERON:0004177,1.41e-10,29;UBERON:0005057,1.41e-10,29;UBERON:0001004,1.50e-10,42;UBERON:0000065,2.24e-10,41;UBERON:0001048,6.52e-10,134;UBERON:0003081,1.65e-09,87;UBERON:0000077,2.90e-09,35;UBERON:0009569,6.71e-09,66;UBERON:0003408,1.27e-08,24;UBERON:0005177,1.45e-08,79;UBERON:0002370,1.76e-08,23;UBERON:0000974,1.76e-08,23;UBERON:0004807,1.76e-08,23;UBERON:0005058,1.76e-08,23;UBERON:0003351,1.76e-08,23;UBERON:0009113,1.76e-08,23;UBERON:0003295,1.76e-08,23;UBERON:0009722,1.76e-08,23;UBERON:0005562,1.76e-08,23;UBERON:0007690,1.76e-08,23;UBERON:0006562,2.29e-08,24;UBERON:0001557,2.29e-08,24;UBERON:0001042,2.29e-08,24;UBERON:0008814,2.29e-08,24;UBERON:0009145,2.29e-08,24;UBERON:0002193,3.23e-08,48;UBERON:0002405,3.23e-08,48;UBERON:0002368,6.84e-08,60;UBERON:0002530,1.10e-07,65;UBERON:0000949,1.58e-07,72;UBERON:0002390,4.64e-07,45;UBERON:0003061,4.64e-07,45;UBERON:0000926,9.02e-07,120;UBERON:0004120,9.02e-07,120;UBERON:0006603,9.02e-07,120|phase1_expression=1.44133962394315,0,0,0,0,0,0,255.276810443996,211.042294505348,256.066591796261,79.2739192884088,66.1311198071339,173.25513869038,225.020115826499,19.6534759471241,30.1688148410841,9.09430441566591,181.075282915628,173.723987378471,139.199805789754,9.95006494767516,14.9929336313337,12.27639008953,15.8392498565473,19.2703796096423,0,0,0,2.85035129184561,5.29263272495855,2.88249663851896,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,1.45653105909346,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,140.601823876383,167.558654804621,172.080025160942,7.20326420900652,4.29800159908135,2.06268836910977,0.606949382578793,1.5869729378161,3.80298842103708,0,0,0,0,0,0,0,1.76272340924412,2.29510095163874,1.68259969081106,1.71390590642282,2.20868540951614,0.979926393719632,0.575072826109418,0.919218786610021,3.30347642998166,1.78762273319263,2.76491759861238,0.263772575460388,1.46380229763855,1.04182674111352,2.51264699101243,1.12552522006336,3.0559649555362,1.17851434189467,2.70506193518296,1.3047961207771,1.81742863999642,0.302286240427142,123.192407698213,37.858650587181,0,0,2.59910566979068,1.34408066129201,10.6737759300131,0,0,0,0,0,0,0,0,0,0,12.9027784082538,105.646656528046,14.9926560455473,6.24547176358089,8.52503339273995,8.07154240396205,10.7013074792362,14.1106448562846,12.1896593589785,1.23597483867187,12.5801440520323,7.07688441559899,8.08834249737046,8.83366073841574,13.5765070877862,3.72783522436244,0.292780797011547,2.30391377494801,7.66371165625774,43.7325204446609,19.7967901227825,22.6185004190055,2.09706895166752,0.915001205637253,1.00523481690292,1.56441888173049,1.53429274398198,1.87009240103604,1.94689515681309,4.58277137326423,15.9240922380919,1.76905930903572,2.10441855886474,2.34216797332867,2.5289231487682,1.80062129805349,2.41127708537144,2.24520447199382,1.40925092313335,1.21812241927647,1.55222022443409,2.37124792226126,2.45837904218165,2.11141348996739,3.94552318369635,4.72680323683516,4.52727816478817,6.1734640922383,3.58261680273288,5.61770549850588,2.31613116403244,1.13665399758237,8.49215667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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231931 | |||
|HGNC= | |||
|MCL_coexpression_id=122 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K349,D3Z3H3 | |||
|association_with_transcript=0bp_to_ENSMUST00000053661,ENSMUST00000119315,NM_153175,uc009bvm.1,uc009bvn.1_5end | |||
|cluster_id=chr6:48658205..48658251,- | |||
|description=CAGE_peak_1_at_Gimap6_5end | |||
|id=chr6:48658205..48658251,- | |||
|ontology_enrichment_celltype=CL:0000838!1.57e-08!12;CL:0000084!6.90e-08!11;CL:0000827!6.90e-08!11;CL:0000542!1.08e-07!13;CL:0000051!1.08e-07!13;CL:0000791!2.23e-07!9;CL:0000789!2.23e-07!9;CL:0002420!2.23e-07!9;CL:0002419!2.23e-07!9;CL:0000790!2.23e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.47e-08,12;CL:0000084,6.51e-08,11;CL:0000827,6.51e-08,11;CL:0000542,1.02e-07,13;CL:0000051,1.02e-07,13;CL:0000791,2.11e-07,9;CL:0000789,2.11e-07,9;CL:0002420,2.11e-07,9;CL:0002419,2.11e-07,9;CL:0000790,2.11e-07,9;CL:0000624,9.57e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.53e-13!193;UBERON:0004120!1.53e-13!193;UBERON:0006603!1.53e-13!193;UBERON:0003104!1.20e-10!131;UBERON:0009142!1.20e-10!131;UBERON:0004177!2.06e-10!29;UBERON:0001048!2.53e-10!147;UBERON:0001004!2.69e-10!42;UBERON:0000065!4.01e-10!41;UBERON:0001041!4.57e-10!92;UBERON:0003081!1.04e-09!88;UBERON:0005057!2.25e-09!51;UBERON:0000077!2.54e-09!97;UBERON:0009569!9.82e-09!66;UBERON:0003408!1.81e-08!24;UBERON:0002370!2.51e-08!23;UBERON:0000974!2.51e-08!23;UBERON:0004807!2.51e-08!23;UBERON:0005058!2.51e-08!23;UBERON:0003351!2.51e-08!23;UBERON:0009113!2.51e-08!23;UBERON:0003295!2.51e-08!23;UBERON:0009722!2.51e-08!23;UBERON:0005562!2.51e-08!23;UBERON:0007690!2.51e-08!23;UBERON:0006562!3.24e-08!24;UBERON:0001557!3.24e-08!24;UBERON:0001042!3.24e-08!24;UBERON:0008814!3.24e-08!24;UBERON:0009145!3.24e-08!24;UBERON:0002405!3.28e-08!70;UBERON:0002193!6.34e-08!48;UBERON:0002368!9.83e-08!60;UBERON:0002530!1.55e-07!65;UBERON:0000949!2.20e-07!72;UBERON:0002390!8.68e-07!45;UBERON:0003061!8.68e-07!45;UBERON:0005177!8.72e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,1.25e-10,80;UBERON:0004177,1.41e-10,29;UBERON:0005057,1.41e-10,29;UBERON:0001004,1.50e-10,42;UBERON:0000065,2.24e-10,41;UBERON:0001048,6.52e-10,134;UBERON:0003081,1.65e-09,87;UBERON:0000077,2.90e-09,35;UBERON:0009569,6.71e-09,66;UBERON:0003408,1.27e-08,24;UBERON:0005177,1.45e-08,79;UBERON:0002370,1.76e-08,23;UBERON:0000974,1.76e-08,23;UBERON:0004807,1.76e-08,23;UBERON:0005058,1.76e-08,23;UBERON:0003351,1.76e-08,23;UBERON:0009113,1.76e-08,23;UBERON:0003295,1.76e-08,23;UBERON:0009722,1.76e-08,23;UBERON:0005562,1.76e-08,23;UBERON:0007690,1.76e-08,23;UBERON:0006562,2.29e-08,24;UBERON:0001557,2.29e-08,24;UBERON:0001042,2.29e-08,24;UBERON:0008814,2.29e-08,24;UBERON:0009145,2.29e-08,24;UBERON:0002193,3.23e-08,48;UBERON:0002405,3.23e-08,48;UBERON:0002368,6.84e-08,60;UBERON:0002530,1.10e-07,65;UBERON:0000949,1.58e-07,72;UBERON:0002390,4.64e-07,45;UBERON:0003061,4.64e-07,45;UBERON:0000926,9.02e-07,120;UBERON:0004120,9.02e-07,120;UBERON:0006603,9.02e-07,120 | |||
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| |||
|short_description=p1@Gimap6 | |||
}} |
Latest revision as of 07:38, 27 September 2015
Short description: | p1@Gimap6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gimap6_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | 0bp_to_ENSMUST00000053661, ENSMUST00000119315, NM_153175, uc009bvm.1, uc009bvn.1_5end |
EntrezGene: | Gimap6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.47e-08 | 12 |
T cell | 6.51e-08 | 11 |
pro-T cell | 6.51e-08 | 11 |
lymphocyte | 1.02e-07 | 13 |
common lymphoid progenitor | 1.02e-07 | 13 |
mature alpha-beta T cell | 2.11e-07 | 9 |
alpha-beta T cell | 2.11e-07 | 9 |
immature T cell | 2.11e-07 | 9 |
mature T cell | 2.11e-07 | 9 |
immature alpha-beta T cell | 2.11e-07 | 9 |
CD4-positive, alpha-beta T cell | 9.57e-07 | 8 |