FFCP PHASE1:Mm9::chr11:50038810..50038813,+: Difference between revisions
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{{FFCP|EntrezGene=103534|HGNC=|UniProt=Q812F8|association_with_transcript=-23bp_to_ENSMUST00000041725,NM_145926,uc007iry.2_5end|description=CAGE_peak_3_at_Mgat4b_5end|id=chr11:50038810..50038813,+|ontology_enrichment_celltype=CL:0000540!1.26e-09!33;CL:0000047!1.26e-09!33;CL:0000031!1.26e-09!33;CL:0000404!1.26e-09!33;CL:0000221!2.63e-09!44;CL:0000133!2.63e-09!44;CL:0002319!5.23e-09!43;CL:0000117!9.26e-09!23;CL:0000337!9.26e-09!23;CL:0000393!6.01e-08!39;CL:0000211!6.01e-08!39;CL:0000055!3.16e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-21,23;CL:0000337,1.98e-21,23;CL:0000540,4.61e-18,33;CL:0000047,4.61e-18,33;CL:0000031,4.61e-18,33;CL:0000404,4.61e-18,33;CL:0002319,1.55e-16,43;CL:0000221,4.63e-16,44;CL:0000133,4.63e-16,44;CL:0002609,1.10e-14,6;CL:0000393,1.13e-14,39;CL:0000211,1.13e-14,39;CL:0000034,5.20e-13,97;CL:0002321,1.20e-10,70;CL:0000723,2.49e-10,91;CL:0000048,2.49e-10,91;CL:0000349,6.11e-09,3;CL:0000351,6.11e-09,3;CL:0000120,1.31e-08,3;CL:0002608,1.39e-08,3;CL:0002613,4.85e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.05e-08!73;UBERON:0005743!1.05e-08!73;UBERON:0000073!1.15e-08!75;UBERON:0001016!1.15e-08!75;UBERON:0002020!4.64e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.20e-13,34;UBERON:0001017,4.38e-13,73;UBERON:0001016,1.35e-12,75;UBERON:0003528,3.47e-12,29;UBERON:0002791,3.47e-12,29;UBERON:0001893,3.47e-12,29;UBERON:0000073,9.96e-10,54;UBERON:0001049,5.38e-09,52;UBERON:0005068,5.38e-09,52;UBERON:0006241,5.38e-09,52;UBERON:0007135,5.38e-09,52;UBERON:0000358,6.11e-09,3;UBERON:0000307,6.11e-09,3;UBERON:0007010,6.11e-09,3;UBERON:0004121,7.68e-09,95;UBERON:0000924,7.68e-09,95;UBERON:0006601,7.68e-09,95;UBERON:0000369,2.01e-08,5;UBERON:0002435,2.01e-08,5;UBERON:0000204,2.01e-08,5;UBERON:0010082,2.01e-08,5;UBERON:0002780,2.48e-08,39;UBERON:0001890,2.48e-08,39;UBERON:0006240,2.48e-08,39;UBERON:0000956,2.50e-08,21;UBERON:0001869,2.50e-08,21;UBERON:0000203,2.50e-08,21;UBERON:0003080,4.70e-08,40;UBERON:0002616,7.61e-08,46;UBERON:0002346,1.19e-07,64;UBERON:0003075,1.19e-07,64;UBERON:0007284,1.19e-07,64;UBERON:0000955,1.29e-07,47;UBERON:0006238,1.29e-07,47|phase1_expression=0.80074423552397,0,0.454999239389536,0.30246421130683,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0.430761996159075,0.215471232685889,0.190023419456374,0.504060259519861,0.443461021310609,1.27006134691926,0,0,0,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.503587271902309,0,0.367093504323363,1.56478268869608,0,0.439372365468944,0,0.839918529752175,0,0,0,0,0.257259436035947,0,0,1.61853168687678,2.11596391708813,1.90149421051854,1.69422266034566,0.889294796111139,1.3498495759221,2.96659908770092,0,0.299600110518405,1.15265491596466,1.24427534770173,2.02508907497536,1.05162480675691,0.856952953211411,1.32521124570968,2.08234358665422,1.62937300731002,1.83843757322004,1.10115880999389,0.127687338085188,0.153606533256243,2.50583946687368,1.55528994124096,1.04182674111352,0,0,0.45839474333043,0.883885756421003,0.569486723196412,2.05039390407831,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,1.41335829804136,0.563373679106722,0,0,0,0.432982082022428,1.01343946190039,1.01104889002957,0,0.258937883647172,0.445326417194474,0.693941307064543,0.304465478312141,0.230615497256059,0.904335843315735,0.352766121407114,0,0.494389935468748,0,0.884610551949874,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,2.26177833803156,0,0,0.20778804455956,0,0,0.124406970610093,0.252722758433675,0,0.260240885925407,0.459804208866946,0.360124259610698,0.452114453507145,0.136072998302656,0,0.281105173679186,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.946978942340841,0.196764231747404,0.308534225774757,0,0.268273401399619,0.583826711835847,0.16455984991348,0.492502392237286,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,0.210289948564127,0.720332286654991,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0.667134131534611,0.570676878337677,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0.398282546508734,0.379335801906163,0.456994050438915,0,0.203651327845314,0.387904974335251,0.49095073923223,0.379419222745544,0.147610147979602,0.627994911365499,0.123397163921801,0,0.166845105716094,0,0.449724224769707,0.202860121388503,0,0.50925170356284,0.287696137450811,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0.369506380333209,0.947457058852424,0.162964976442026,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,0.975668239288994,0,0.44292937929755,0.159454768657487,0,0.172684981865896,0.144649058581512,0,1.08781136763742,0,0,0,0.468846746368813,0.327869890753351,0,1.26203287766503,0.780877488593277,0,0.238968797952552,0.668396022247182,0.283076530788832,1.21443210502468,0,0.790575555893047,0.321321316421807,0.141940085208269,0.178065603667255,0.488660878060728,0.494910368917606,0,0,0.604647113929502,0,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0,0.354680467284547,0.713475270408282,0,0.913394847343798,1.40803024838226,0.847328283455281,0.441056796109924,0,0.322928853391811,0,0,0.164140899745061,0.874442509889552,0.370850604021019,0.170870880797853,0.412773735926445,0.370389054739423,0,0.136694227721025,0.228778173206523,0.169978429993855,0,0.276399947608848,0,0.158167996790568,0.406638934253697,0.108005340821801,0,0,0,0,0.26175594198403,0.388844919875379,0,0,0.448549638131936,0.496375471371293,0.388902376688095,0.258319646955462,0.168956125490778,0.117357238645754,0.651021924219751,0.734015410979976,1.20792060413003,0.576060012515731,0,0.202725215290164,0,0,0,0,0.240390899039938,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,2.44184548711471,2.78112955489375,1.67884616364078,0,0.187682475451182,0.549454872801795,0.214368379079066,0.501572104035363,1.6942555278512,0.920650473014354,1.71868654031819,0.859265911718438,2.05524755931193,0.755393897389701,0,0.45032120322422,0,0,0.518936737920883,1.19707462020309,0,0.486213434136588,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.384150914429216,0.229741875822453,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.578719832943424,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0,0|short_description=p3@Mgat4b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=103534 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q812F8 | |||
|association_with_transcript=-23bp_to_ENSMUST00000041725,NM_145926,uc007iry.2_5end | |||
|cluster_id=chr11:50038810..50038813,+ | |||
|description=CAGE_peak_3_at_Mgat4b_5end | |||
|id=chr11:50038810..50038813,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.26e-09!33;CL:0000047!1.26e-09!33;CL:0000031!1.26e-09!33;CL:0000404!1.26e-09!33;CL:0000221!2.63e-09!44;CL:0000133!2.63e-09!44;CL:0002319!5.23e-09!43;CL:0000117!9.26e-09!23;CL:0000337!9.26e-09!23;CL:0000393!6.01e-08!39;CL:0000211!6.01e-08!39;CL:0000055!3.16e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.98e-21,23;CL:0000337,1.98e-21,23;CL:0000540,4.61e-18,33;CL:0000047,4.61e-18,33;CL:0000031,4.61e-18,33;CL:0000404,4.61e-18,33;CL:0002319,1.55e-16,43;CL:0000221,4.63e-16,44;CL:0000133,4.63e-16,44;CL:0002609,1.10e-14,6;CL:0000393,1.13e-14,39;CL:0000211,1.13e-14,39;CL:0000034,5.20e-13,97;CL:0002321,1.20e-10,70;CL:0000723,2.49e-10,91;CL:0000048,2.49e-10,91;CL:0000349,6.11e-09,3;CL:0000351,6.11e-09,3;CL:0000120,1.31e-08,3;CL:0002608,1.39e-08,3;CL:0002613,4.85e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.05e-08!73;UBERON:0005743!1.05e-08!73;UBERON:0000073!1.15e-08!75;UBERON:0001016!1.15e-08!75;UBERON:0002020!4.64e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.20e-13,34;UBERON:0001017,4.38e-13,73;UBERON:0001016,1.35e-12,75;UBERON:0003528,3.47e-12,29;UBERON:0002791,3.47e-12,29;UBERON:0001893,3.47e-12,29;UBERON:0000073,9.96e-10,54;UBERON:0001049,5.38e-09,52;UBERON:0005068,5.38e-09,52;UBERON:0006241,5.38e-09,52;UBERON:0007135,5.38e-09,52;UBERON:0000358,6.11e-09,3;UBERON:0000307,6.11e-09,3;UBERON:0007010,6.11e-09,3;UBERON:0004121,7.68e-09,95;UBERON:0000924,7.68e-09,95;UBERON:0006601,7.68e-09,95;UBERON:0000369,2.01e-08,5;UBERON:0002435,2.01e-08,5;UBERON:0000204,2.01e-08,5;UBERON:0010082,2.01e-08,5;UBERON:0002780,2.48e-08,39;UBERON:0001890,2.48e-08,39;UBERON:0006240,2.48e-08,39;UBERON:0000956,2.50e-08,21;UBERON:0001869,2.50e-08,21;UBERON:0000203,2.50e-08,21;UBERON:0003080,4.70e-08,40;UBERON:0002616,7.61e-08,46;UBERON:0002346,1.19e-07,64;UBERON:0003075,1.19e-07,64;UBERON:0007284,1.19e-07,64;UBERON:0000955,1.29e-07,47;UBERON:0006238,1.29e-07,47 | |||
|phase1_expression=0.80074423552397,0,0.454999239389536,0.30246421130683,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.340173160604279,0.0992909512008853,0,0,0,0,0.430761996159075,0.215471232685889,0.190023419456374,0.504060259519861,0.443461021310609,1.27006134691926,0,0,0,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.503587271902309,0,0.367093504323363,1.56478268869608,0,0.439372365468944,0,0.839918529752175,0,0,0,0,0.257259436035947,0,0,1.61853168687678,2.11596391708813,1.90149421051854,1.69422266034566,0.889294796111139,1.3498495759221,2.96659908770092,0,0.299600110518405,1.15265491596466,1.24427534770173,2.02508907497536,1.05162480675691,0.856952953211411,1.32521124570968,2.08234358665422,1.62937300731002,1.83843757322004,1.10115880999389,0.127687338085188,0.153606533256243,2.50583946687368,1.55528994124096,1.04182674111352,0,0,0.45839474333043,0.883885756421003,0.569486723196412,2.05039390407831,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,1.41335829804136,0.563373679106722,0,0,0,0.432982082022428,1.01343946190039,1.01104889002957,0,0.258937883647172,0.445326417194474,0.693941307064543,0.304465478312141,0.230615497256059,0.904335843315735,0.352766121407114,0,0.494389935468748,0,0.884610551949874,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,2.26177833803156,0,0,0.20778804455956,0,0,0.124406970610093,0.252722758433675,0,0.260240885925407,0.459804208866946,0.360124259610698,0.452114453507145,0.136072998302656,0,0.281105173679186,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.946978942340841,0.196764231747404,0.308534225774757,0,0.268273401399619,0.583826711835847,0.16455984991348,0.492502392237286,0.0810688095458557,0.292399974850665,0.219550115291051,0.134206418760372,0.210289948564127,0.720332286654991,0,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0.667134131534611,0.570676878337677,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0.216138049874694,0.398282546508734,0.379335801906163,0.456994050438915,0,0.203651327845314,0.387904974335251,0.49095073923223,0.379419222745544,0.147610147979602,0.627994911365499,0.123397163921801,0,0.166845105716094,0,0.449724224769707,0.202860121388503,0,0.50925170356284,0.287696137450811,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0.369506380333209,0.947457058852424,0.162964976442026,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,0.975668239288994,0,0.44292937929755,0.159454768657487,0,0.172684981865896,0.144649058581512,0,1.08781136763742,0,0,0,0.468846746368813,0.327869890753351,0,1.26203287766503,0.780877488593277,0,0.238968797952552,0.668396022247182,0.283076530788832,1.21443210502468,0,0.790575555893047,0.321321316421807,0.141940085208269,0.178065603667255,0.488660878060728,0.494910368917606,0,0,0.604647113929502,0,0,0.614870295887855,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0,0.354680467284547,0.713475270408282,0,0.913394847343798,1.40803024838226,0.847328283455281,0.441056796109924,0,0.322928853391811,0,0,0.164140899745061,0.874442509889552,0.370850604021019,0.170870880797853,0.412773735926445,0.370389054739423,0,0.136694227721025,0.228778173206523,0.169978429993855,0,0.276399947608848,0,0.158167996790568,0.406638934253697,0.108005340821801,0,0,0,0,0.26175594198403,0.388844919875379,0,0,0.448549638131936,0.496375471371293,0.388902376688095,0.258319646955462,0.168956125490778,0.117357238645754,0.651021924219751,0.734015410979976,1.20792060413003,0.576060012515731,0,0.202725215290164,0,0,0,0,0.240390899039938,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,2.44184548711471,2.78112955489375,1.67884616364078,0,0.187682475451182,0.549454872801795,0.214368379079066,0.501572104035363,1.6942555278512,0.920650473014354,1.71868654031819,0.859265911718438,2.05524755931193,0.755393897389701,0,0.45032120322422,0,0,0.518936737920883,1.19707462020309,0,0.486213434136588,0.209613162627982,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.280924522409647,0.384150914429216,0.229741875822453,0.476293691283074,0.347652977834566,0.77163688185482,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.578719832943424,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p3@Mgat4b | |||
}} |
Latest revision as of 14:57, 1 October 2015
Short description: | p3@Mgat4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mgat4b_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENSMUST00000041725, NM_145926, uc007iry.2_5end |
EntrezGene: | Mgat4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.98e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.98e-21 | 23 |
neuron | 4.61e-18 | 33 |
neuronal stem cell | 4.61e-18 | 33 |
neuroblast | 4.61e-18 | 33 |
electrically signaling cell | 4.61e-18 | 33 |
neural cell | 1.55e-16 | 43 |
ectodermal cell | 4.63e-16 | 44 |
neurectodermal cell | 4.63e-16 | 44 |
neuron of cerebral cortex | 1.10e-14 | 6 |
electrically responsive cell | 1.13e-14 | 39 |
electrically active cell | 1.13e-14 | 39 |
stem cell | 5.20e-13 | 97 |
embryonic cell | 1.20e-10 | 70 |
somatic stem cell | 2.49e-10 | 91 |
multi fate stem cell | 2.49e-10 | 91 |
extraembryonic cell | 6.11e-09 | 3 |
trophoblast cell | 6.11e-09 | 3 |
granule cell | 1.31e-08 | 3 |
hippocampal neuron | 1.39e-08 | 3 |
striatum neuron | 4.85e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.20e-13 | 34 |
central nervous system | 4.38e-13 | 73 |
nervous system | 1.35e-12 | 75 |
brain grey matter | 3.47e-12 | 29 |
regional part of telencephalon | 3.47e-12 | 29 |
telencephalon | 3.47e-12 | 29 |
regional part of nervous system | 9.96e-10 | 54 |
neural tube | 5.38e-09 | 52 |
neural rod | 5.38e-09 | 52 |
future spinal cord | 5.38e-09 | 52 |
neural keel | 5.38e-09 | 52 |
blastocyst | 6.11e-09 | 3 |
blastula | 6.11e-09 | 3 |
cleaving embryo | 6.11e-09 | 3 |
ectoderm-derived structure | 7.68e-09 | 95 |
ectoderm | 7.68e-09 | 95 |
presumptive ectoderm | 7.68e-09 | 95 |
corpus striatum | 2.01e-08 | 5 |
striatum | 2.01e-08 | 5 |
ventral part of telencephalon | 2.01e-08 | 5 |
future corpus striatum | 2.01e-08 | 5 |
regional part of forebrain | 2.48e-08 | 39 |
forebrain | 2.48e-08 | 39 |
future forebrain | 2.48e-08 | 39 |
cerebral cortex | 2.50e-08 | 21 |
cerebral hemisphere | 2.50e-08 | 21 |
pallium | 2.50e-08 | 21 |
anterior neural tube | 4.70e-08 | 40 |
regional part of brain | 7.61e-08 | 46 |
neurectoderm | 1.19e-07 | 64 |
neural plate | 1.19e-07 | 64 |
presumptive neural plate | 1.19e-07 | 64 |
brain | 1.29e-07 | 47 |
future brain | 1.29e-07 | 47 |