FFCP PHASE1:Mm9::chr16:13818948..13818976,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18203 | |EntrezGene=18203 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=48 | |||
|TSSclassifier=NA | |||
|UniProt=Q64311 | |UniProt=Q64311 | ||
|association_with_transcript=-367bp_to_ENSMUST00000023362_5end | |association_with_transcript=-367bp_to_ENSMUST00000023362_5end | ||
|cluster_id=chr16:13818948..13818976,+ | |||
|description=CAGE_peak_2_at_Ntan1_5end | |description=CAGE_peak_2_at_Ntan1_5end | ||
|id=chr16:13818948..13818976,+ | |id=chr16:13818948..13818976,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.52e-10!33;CL:0000047!2.52e-10!33;CL:0000031!2.52e-10!33;CL:0000404!2.52e-10!33;CL:0000117!4.14e-08!23;CL:0000337!4.14e-08!23 | |ontology_enrichment_celltype=CL:0000540!2.52e-10!33;CL:0000047!2.52e-10!33;CL:0000031!2.52e-10!33;CL:0000404!2.52e-10!33;CL:0000117!4.14e-08!23;CL:0000337!4.14e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.07e-11,33;CL:0000047,1.07e-11,33;CL:0000031,1.07e-11,33;CL:0000404,1.07e-11,33;CL:0000117,1.91e-09,23;CL:0000337,1.91e-09,23;CL:0000393,3.54e-08,39;CL:0000211,3.54e-08,39;CL:0000221,2.28e-07,44;CL:0000133,2.28e-07,44;CL:0002319,6.65e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.76e-12!73;UBERON:0005743!6.76e-12!73;UBERON:0003056!2.16e-11!49;UBERON:0000073!8.42e-11!75;UBERON:0001016!8.42e-11!75;UBERON:0000153!1.55e-10!94;UBERON:0002346!5.53e-10!71;UBERON:0003075!5.53e-10!71;UBERON:0007284!5.53e-10!71;UBERON:0007811!7.28e-10!86;UBERON:0002780!8.48e-10!39;UBERON:0001890!8.48e-10!39;UBERON:0006240!8.48e-10!39;UBERON:0003080!1.10e-09!40;UBERON:0001049!1.36e-09!52;UBERON:0005068!1.36e-09!52;UBERON:0006241!1.36e-09!52;UBERON:0007135!1.36e-09!52;UBERON:0004121!2.65e-09!102;UBERON:0000924!2.65e-09!102;UBERON:0006601!2.65e-09!102;UBERON:0002020!6.65e-09!34;UBERON:0000033!1.45e-08!63;UBERON:0000955!3.56e-07!50;UBERON:0006238!3.56e-07!50;UBERON:0002616!5.49e-07!49 | |ontology_enrichment_uberon=UBERON:0001017!6.76e-12!73;UBERON:0005743!6.76e-12!73;UBERON:0003056!2.16e-11!49;UBERON:0000073!8.42e-11!75;UBERON:0001016!8.42e-11!75;UBERON:0000153!1.55e-10!94;UBERON:0002346!5.53e-10!71;UBERON:0003075!5.53e-10!71;UBERON:0007284!5.53e-10!71;UBERON:0007811!7.28e-10!86;UBERON:0002780!8.48e-10!39;UBERON:0001890!8.48e-10!39;UBERON:0006240!8.48e-10!39;UBERON:0003080!1.10e-09!40;UBERON:0001049!1.36e-09!52;UBERON:0005068!1.36e-09!52;UBERON:0006241!1.36e-09!52;UBERON:0007135!1.36e-09!52;UBERON:0004121!2.65e-09!102;UBERON:0000924!2.65e-09!102;UBERON:0006601!2.65e-09!102;UBERON:0002020!6.65e-09!34;UBERON:0000033!1.45e-08!63;UBERON:0000955!3.56e-07!50;UBERON:0006238!3.56e-07!50;UBERON:0002616!5.49e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.07e-14,64;UBERON:0003075,1.07e-14,64;UBERON:0007284,1.07e-14,64;UBERON:0001017,1.46e-13,73;UBERON:0003056,1.08e-12,49;UBERON:0001016,1.16e-12,75;UBERON:0004121,2.95e-12,95;UBERON:0000924,2.95e-12,95;UBERON:0006601,2.95e-12,95;UBERON:0010371,3.47e-12,73;UBERON:0001049,4.69e-11,52;UBERON:0005068,4.69e-11,52;UBERON:0006241,4.69e-11,52;UBERON:0007135,4.69e-11,52;UBERON:0002780,4.77e-11,39;UBERON:0001890,4.77e-11,39;UBERON:0006240,4.77e-11,39;UBERON:0000073,1.42e-10,54;UBERON:0003080,1.85e-10,40;UBERON:0002020,6.03e-10,34;UBERON:0000955,2.17e-08,47;UBERON:0006238,2.17e-08,47;UBERON:0002616,3.70e-08,46;UBERON:0003528,6.21e-07,29;UBERON:0002791,6.21e-07,29;UBERON:0001893,6.21e-07,29 | |||
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| ||
|short_description=p2@Ntan1 | |short_description=p2@Ntan1 | ||
}} | }} |
Latest revision as of 15:36, 1 October 2015
Short description: | p2@Ntan1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ntan1_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | -367bp_to_ENSMUST00000023362_5end |
EntrezGene: | Ntan1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.07e-11 | 33 |
neuronal stem cell | 1.07e-11 | 33 |
neuroblast | 1.07e-11 | 33 |
electrically signaling cell | 1.07e-11 | 33 |
CNS neuron (sensu Vertebrata) | 1.91e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.91e-09 | 23 |
electrically responsive cell | 3.54e-08 | 39 |
electrically active cell | 3.54e-08 | 39 |
ectodermal cell | 2.28e-07 | 44 |
neurectodermal cell | 2.28e-07 | 44 |
neural cell | 6.65e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.07e-14 | 64 |
neural plate | 1.07e-14 | 64 |
presumptive neural plate | 1.07e-14 | 64 |
central nervous system | 1.46e-13 | 73 |
pre-chordal neural plate | 1.08e-12 | 49 |
nervous system | 1.16e-12 | 75 |
ectoderm-derived structure | 2.95e-12 | 95 |
ectoderm | 2.95e-12 | 95 |
presumptive ectoderm | 2.95e-12 | 95 |
ecto-epithelium | 3.47e-12 | 73 |
neural tube | 4.69e-11 | 52 |
neural rod | 4.69e-11 | 52 |
future spinal cord | 4.69e-11 | 52 |
neural keel | 4.69e-11 | 52 |
regional part of forebrain | 4.77e-11 | 39 |
forebrain | 4.77e-11 | 39 |
future forebrain | 4.77e-11 | 39 |
regional part of nervous system | 1.42e-10 | 54 |
anterior neural tube | 1.85e-10 | 40 |
gray matter | 6.03e-10 | 34 |
brain | 2.17e-08 | 47 |
future brain | 2.17e-08 | 47 |
regional part of brain | 3.70e-08 | 46 |
brain grey matter | 6.21e-07 | 29 |
regional part of telencephalon | 6.21e-07 | 29 |
telencephalon | 6.21e-07 | 29 |