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FFCP PHASE1:Mm9::chr5:115879953..115880001,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17690
|EntrezGene=17690
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=F8WJA5
|UniProt=F8WJA5
|association_with_transcript=-4bp_to_ENSMUST00000067168_5end
|association_with_transcript=-4bp_to_ENSMUST00000067168_5end
|cluster_id=chr5:115879953..115880001,+
|description=CAGE_peak_3_at_Msi1_5end
|description=CAGE_peak_3_at_Msi1_5end
|id=chr5:115879953..115880001,+
|id=chr5:115879953..115880001,+
|ontology_enrichment_celltype=CL:0000221!1.84e-15!44;CL:0000133!1.84e-15!44;CL:0000540!4.52e-15!33;CL:0000047!4.52e-15!33;CL:0000031!4.52e-15!33;CL:0000404!4.52e-15!33;CL:0002319!5.78e-15!43;CL:0000117!1.45e-12!23;CL:0000337!1.45e-12!23;CL:0000393!2.18e-11!39;CL:0000211!2.18e-11!39;CL:0000055!3.15e-11!50;CL:0002321!8.65e-07!70;CL:0000220!8.65e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000221,1.39e-18,44;CL:0000133,1.39e-18,44;CL:0000540,3.43e-18,33;CL:0000047,3.43e-18,33;CL:0000031,3.43e-18,33;CL:0000404,3.43e-18,33;CL:0002319,8.10e-18,43;CL:0000117,7.60e-17,23;CL:0000337,7.60e-17,23;CL:0000393,5.11e-14,39;CL:0000211,5.11e-14,39;CL:0002321,7.85e-11,70;CL:0002609,2.74e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.75e-21!102;UBERON:0000924!3.75e-21!102;UBERON:0006601!3.75e-21!102;UBERON:0001017!2.91e-20!73;UBERON:0005743!2.91e-20!73;UBERON:0000073!2.97e-19!75;UBERON:0001016!2.97e-19!75;UBERON:0002346!4.88e-18!71;UBERON:0003075!4.88e-18!71;UBERON:0007284!4.88e-18!71;UBERON:0000033!1.51e-15!63;UBERON:0003056!4.88e-15!49;UBERON:0001049!2.09e-12!52;UBERON:0005068!2.09e-12!52;UBERON:0006241!2.09e-12!52;UBERON:0007135!2.09e-12!52;UBERON:0000955!2.71e-11!50;UBERON:0006238!2.71e-11!50;UBERON:0002616!3.15e-11!49;UBERON:0003080!7.09e-10!40;UBERON:0002780!2.07e-09!39;UBERON:0001890!2.07e-09!39;UBERON:0006240!2.07e-09!39;UBERON:0000153!6.23e-08!94;UBERON:0007811!8.69e-08!86;UBERON:0000468!1.26e-07!333;UBERON:0002020!3.92e-07!34;UBERON:0000970!5.97e-07!9;UBERON:0000019!5.97e-07!9;UBERON:0000047!5.97e-07!9;UBERON:0004088!5.97e-07!9;UBERON:0002104!5.97e-07!9;UBERON:0001456!5.97e-07!9;UBERON:0003072!5.97e-07!9;UBERON:0003071!5.97e-07!9;UBERON:0004128!5.97e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.76e-22,95;UBERON:0000924,2.76e-22,95;UBERON:0006601,2.76e-22,95;UBERON:0002346,1.33e-20,64;UBERON:0003075,1.33e-20,64;UBERON:0007284,1.33e-20,64;UBERON:0001017,6.18e-19,73;UBERON:0001016,4.76e-18,75;UBERON:0010371,1.75e-17,73;UBERON:0003056,1.85e-17,49;UBERON:0000073,4.26e-13,54;UBERON:0010314,7.92e-12,92;UBERON:0001049,2.64e-11,52;UBERON:0005068,2.64e-11,52;UBERON:0006241,2.64e-11,52;UBERON:0007135,2.64e-11,52;UBERON:0000970,1.75e-10,9;UBERON:0000019,1.75e-10,9;UBERON:0000047,1.75e-10,9;UBERON:0010312,1.75e-10,9;UBERON:0004088,1.75e-10,9;UBERON:0002104,1.75e-10,9;UBERON:0001456,1.75e-10,9;UBERON:0003072,1.75e-10,9;UBERON:0004128,1.75e-10,9;UBERON:0003071,1.75e-10,9;UBERON:0003080,5.53e-10,40;UBERON:0002616,1.49e-09,46;UBERON:0002780,2.49e-09,39;UBERON:0001890,2.49e-09,39;UBERON:0006240,2.49e-09,39;UBERON:0000955,3.48e-09,47;UBERON:0006238,3.48e-09,47;UBERON:0000020,7.61e-09,12;UBERON:0001032,7.61e-09,12;UBERON:0004456,7.61e-09,12;UBERON:0001444,4.27e-08,11;UBERON:0000007,4.38e-08,8;UBERON:0003296,4.38e-08,8;UBERON:0010133,4.38e-08,8;UBERON:0000033,6.14e-08,13;UBERON:0005085,6.14e-08,13;UBERON:0001894,1.73e-07,10;UBERON:0006222,1.73e-07,10
|phase1_expression=0.480446541314382,0,0,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.47997726838022,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,2.02196133825892,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,1.74420125104357,0.439372365468944,1.1665793944457,0.979904951377538,1.43752564364972,0,0,0,0,0,0,7.48570905180512,11.1088105647127,8.23980824558033,0,0,0,0,0,1.19840044207362,3.84218305321555,6.53244557543409,6.07526722492608,7.78202357000113,0.571301968807607,1.76694832761291,7.22695715368229,9.77623804386011,6.43453150627015,1.10115880999389,1.0214987046815,1.53606533256243,8.44072241473241,10.9785172322892,9.89735404057844,1.67509799400829,0.56276261003168,0.763991238884051,1.76777151284201,2.13557521198654,5.96478226640962,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,2.11265129665021,1.28326477414318,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,1.21786191324856,0.461230994512117,0.301445281105245,0.470354828542819,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,2.54644086988199,0.915001205637253,8.29318723944905,0.695297280769106,0.767146371990992,1.24672826735736,0.811206315338788,0.407357455401265,0.124406970610093,0.252722758433675,2.73574412652416,4.16385417480652,2.98872735763515,5.94205028357652,3.91832526372859,7.8241974024027,4.61209393025459,4.8724896771059,4.9153640440413,2.58681591519411,2.45837904218165,0.703804496655795,0.219195732427575,0.556094498451196,0.348252166522167,0,0.59710280045548,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,0,0.393528463494808,0,0,0,0.116765342367169,0,0,0,0,0,0,0.630869845692382,5.9684675179985,0,0,1.91959425481711,1.62565670302307,0.77320476793256,0.80673409849337,1.55664630691409,0.380451252225118,0,0.329397909448022,0.502670417600539,0.795825888164603,0.58489226135736,0,0.432276099749388,0.199141273254367,1.51734320762465,0.685491075658373,3.38123207019241,0.814605311381257,0.969762435838129,0.841629838683823,0.189709611372772,0,0,0,0,0,0.589676985339609,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.977789858652155,0.339490171550376,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.80275294993896,2.10981035865966,0,0,1.57754109708128,1.17131623288992,2.15423397732799,1.43381278771531,1.11399337041197,0.849229592366497,1.21443210502468,0.876767573733936,1.18586333383957,0.642642632843614,0.425820255624806,0.890328018336276,0.651547837414304,0.164970122972535,0,0.485561272309963,0.604647113929502,0,0,0,0,0,0,0,0,0,2.38307724027652,2.34079422240703,3.88076051348264,2.7863814554107,4.61084607469911,2.67553226403106,1.15184314421485,3.95804433848979,0.23467170806371,0.21183207086382,0,0,0.322928853391811,0.180938774784468,0.477489376012546,0.656563598980245,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0.169978429993855,0,0,0,1.89801596148681,0.813277868507395,0.648032044930808,0.836353184057875,0.218362563746178,0.539457385539283,0.165306911450672,0,0,0,0.56369293868419,0.448549638131936,0.66183396182839,0.388902376688095,0.258319646955462,0.844780627453891,0.938857909166032,1.0416350787516,2.83120229949419,2.65742532908607,2.01621004380506,0,0.405450430580328,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0.900642406448441,0.453142408984205,0,4.35906859853542,2.79317411380722,3.24393850932855,1.21553358534147,1.67690530102386,1.10306105070008,1.33348036680969,0.824140228955577,0.962757628775446,0.505394423527595,1.01391719956096,0.754505365544305,0.842773567228942,1.28050304809739,0.804096565378586,0.952587382566147,0.927074607558844,0.964546102318525,0.824171801606613,1.32479028120958,1.71434626192708,1.06485483695602,1.1921809497366,1.30811774969096,0.941093804153306,0.423073039458382,0.73171189149109,1.05227884575137,0.543216455383447,0.561142271657738,0.949080144993393,1.57607171800902,0.409231043169689,1.08455788830176,0.964533054905707,3.74715866906919,1.16965804222704,1.07435527024149,0.57386499620653,0,0.463735671240843
|phase1_expression=0.480446541314382,0,0,0,0,0.671517087647559,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.47997726838022,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,2.02196133825892,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,1.74420125104357,0.439372365468944,1.1665793944457,0.979904951377538,1.43752564364972,0,0,0,0,0,0,7.48570905180512,11.1088105647127,8.23980824558033,0,0,0,0,0,1.19840044207362,3.84218305321555,6.53244557543409,6.07526722492608,7.78202357000113,0.571301968807607,1.76694832761291,7.22695715368229,9.77623804386011,6.43453150627015,1.10115880999389,1.0214987046815,1.53606533256243,8.44072241473241,10.9785172322892,9.89735404057844,1.67509799400829,0.56276261003168,0.763991238884051,1.76777151284201,2.13557521198654,5.96478226640962,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,2.11265129665021,1.28326477414318,0,0,0,0,0,0,0,0.148442139064825,0.346970653532272,1.21786191324856,0.461230994512117,0.301445281105245,0.470354828542819,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,2.54644086988199,0.915001205637253,8.29318723944905,0.695297280769106,0.767146371990992,1.24672826735736,0.811206315338788,0.407357455401265,0.124406970610093,0.252722758433675,2.73574412652416,4.16385417480652,2.98872735763515,5.94205028357652,3.91832526372859,7.8241974024027,4.61209393025459,4.8724896771059,4.9153640440413,2.58681591519411,2.45837904218165,0.703804496655795,0.219195732427575,0.556094498451196,0.348252166522167,0,0.59710280045548,0,0,0,0.414251545071004,0.938104239924385,0.180062061461015,0,0.393528463494808,0,0,0,0.116765342367169,0,0,0,0,0,0,0.630869845692382,5.9684675179985,0,0,1.91959425481711,1.62565670302307,0.77320476793256,0.80673409849337,1.55664630691409,0.380451252225118,0,0.329397909448022,0.502670417600539,0.795825888164603,0.58489226135736,0,0.432276099749388,0.199141273254367,1.51734320762465,0.685491075658373,3.38123207019241,0.814605311381257,0.969762435838129,0.841629838683823,0.189709611372772,0,0,0,0,0,0.589676985339609,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.977789858652155,0.339490171550376,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.80275294993896,2.10981035865966,0,0,1.57754109708128,1.17131623288992,2.15423397732799,1.43381278771531,1.11399337041197,0.849229592366497,1.21443210502468,0.876767573733936,1.18586333383957,0.642642632843614,0.425820255624806,0.890328018336276,0.651547837414304,0.164970122972535,0,0.485561272309963,0.604647113929502,0,0,0,0,0,0,0,0,0,2.38307724027652,2.34079422240703,3.88076051348264,2.7863814554107,4.61084607469911,2.67553226403106,1.15184314421485,3.95804433848979,0.23467170806371,0.21183207086382,0,0,0.322928853391811,0.180938774784468,0.477489376012546,0.656563598980245,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0.169978429993855,0,0,0,1.89801596148681,0.813277868507395,0.648032044930808,0.836353184057875,0.218362563746178,0.539457385539283,0.165306911450672,0,0,0,0.56369293868419,0.448549638131936,0.66183396182839,0.388902376688095,0.258319646955462,0.844780627453891,0.938857909166032,1.0416350787516,2.83120229949419,2.65742532908607,2.01621004380506,0,0.405450430580328,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0.900642406448441,0.453142408984205,0,4.35906859853542,2.79317411380722,3.24393850932855,1.21553358534147,1.67690530102386,1.10306105070008,1.33348036680969,0.824140228955577,0.962757628775446,0.505394423527595,1.01391719956096,0.754505365544305,0.842773567228942,1.28050304809739,0.804096565378586,0.952587382566147,0.927074607558844,0.964546102318525,0.824171801606613,1.32479028120958,1.71434626192708,1.06485483695602,1.1921809497366,1.30811774969096,0.941093804153306,0.423073039458382,0.73171189149109,1.05227884575137,0.543216455383447,0.561142271657738,0.949080144993393,1.57607171800902,0.409231043169689,1.08455788830176,0.964533054905707,3.74715866906919,1.16965804222704,1.07435527024149,0.57386499620653,0,0.463735671240843
|short_description=p3@Msi1
|short_description=p3@Msi1
}}
}}

Latest revision as of 17:24, 1 October 2015

Short description:p3@Msi1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Msi1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -4bp_to_ENSMUST00000067168_5end
EntrezGene:Msi1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Msi1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F18.29
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C64.16
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C95.94
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C67.82
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G15.97
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C73.88
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B94.61
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I84.36
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.76e-2295
ectoderm2.76e-2295
presumptive ectoderm2.76e-2295
neurectoderm1.33e-2064
neural plate1.33e-2064
presumptive neural plate1.33e-2064
central nervous system6.18e-1973
nervous system4.76e-1875
ecto-epithelium1.75e-1773
pre-chordal neural plate1.85e-1749
regional part of nervous system4.26e-1354
structure with developmental contribution from neural crest7.92e-1292
neural tube2.64e-1152
neural rod2.64e-1152
future spinal cord2.64e-1152
neural keel2.64e-1152
eye1.75e-109
camera-type eye1.75e-109
simple eye1.75e-109
immature eye1.75e-109
ocular region1.75e-109
visual system1.75e-109
face1.75e-109
optic cup1.75e-109
optic vesicle1.75e-109
eye primordium1.75e-109
anterior neural tube5.53e-1040
regional part of brain1.49e-0946
regional part of forebrain2.49e-0939
forebrain2.49e-0939
future forebrain2.49e-0939
brain3.48e-0947
future brain3.48e-0947
sense organ7.61e-0912
sensory system7.61e-0912
entire sense organ system7.61e-0912
subdivision of head4.27e-0811
pituitary gland4.38e-088
gland of diencephalon4.38e-088
neuroendocrine gland4.38e-088
head6.14e-0813
ectodermal placode6.14e-0813
diencephalon1.73e-0710
future diencephalon1.73e-0710
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