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FFCP PHASE1:Mm9::chrX:38753982..38754010,+: Difference between revisions

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{{FFCP|EntrezGene=53623|HGNC=|UniProt=Q3TTV2|association_with_transcript=-20bp_to_ENSMUST00000128197,uc009taj.1_5end|description=CAGE_peak_4_at_Gria3_5end|id=chrX:38753982..38754010,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.66e-18!73;UBERON:0005743!5.66e-18!73;UBERON:0000073!1.77e-16!75;UBERON:0001016!1.77e-16!75;UBERON:0004121!4.90e-15!102;UBERON:0000924!4.90e-15!102;UBERON:0006601!4.90e-15!102;UBERON:0002346!5.03e-13!71;UBERON:0003075!5.03e-13!71;UBERON:0007284!5.03e-13!71;UBERON:0001049!7.64e-13!52;UBERON:0005068!7.64e-13!52;UBERON:0006241!7.64e-13!52;UBERON:0007135!7.64e-13!52;UBERON:0000955!3.39e-12!50;UBERON:0006238!3.39e-12!50;UBERON:0002616!1.03e-11!49;UBERON:0002020!1.47e-10!34;UBERON:0000033!1.72e-10!63;UBERON:0000475!2.38e-09!200;UBERON:0004111!4.10e-09!122;UBERON:0000025!4.36e-09!114;UBERON:0002791!1.46e-08!29;UBERON:0003528!1.46e-08!29;UBERON:0001893!1.46e-08!29;UBERON:0002619!5.49e-08!17;UBERON:0002021!5.59e-08!10;UBERON:0000411!5.59e-08!10;UBERON:0001950!5.59e-08!10;UBERON:0003080!7.13e-08!40;UBERON:0002780!1.99e-07!39;UBERON:0001890!1.99e-07!39;UBERON:0006240!1.99e-07!39;UBERON:0000956!2.00e-07!21;UBERON:0001869!2.00e-07!21;UBERON:0000203!2.00e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.02e-17,73;UBERON:0001016,1.12e-16,75;UBERON:0000073,1.52e-13,54;UBERON:0001049,1.96e-12,52;UBERON:0005068,1.96e-12,52;UBERON:0006241,1.96e-12,52;UBERON:0007135,1.96e-12,52;UBERON:0004121,7.15e-12,95;UBERON:0000924,7.15e-12,95;UBERON:0006601,7.15e-12,95;UBERON:0002346,1.12e-10,64;UBERON:0003075,1.12e-10,64;UBERON:0007284,1.12e-10,64;UBERON:0002020,1.50e-10,34;UBERON:0000955,5.52e-10,47;UBERON:0006238,5.52e-10,47;UBERON:0002021,7.37e-10,10;UBERON:0000411,7.37e-10,10;UBERON:0001950,7.37e-10,10;UBERON:0002616,1.89e-09,46;UBERON:0010371,8.75e-09,73;UBERON:0002619,9.10e-09,17;UBERON:0003528,3.90e-08,29;UBERON:0002791,3.90e-08,29;UBERON:0001893,3.90e-08,29;UBERON:0003076,5.01e-08,12;UBERON:0003057,5.01e-08,12;UBERON:0000956,2.56e-07,21;UBERON:0001869,2.56e-07,21;UBERON:0000203,2.56e-07,21;UBERON:0000025,4.47e-07,114;UBERON:0004111,9.17e-07,122|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.36069264241712,0.297872853602656,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0,6.29484089877886,4.56196190487815,2.0190142737785,1.56478268869608,1.52617609466313,1.5378032791413,3.30530828426282,0.979904951377538,1.43752564364972,0,0.725362142011344,1.00828139742739,0,0.573066879877513,0.515672092277442,1.41621522601718,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,1.53687322128622,0.518448061542388,0.810035629990144,0.630974884054146,1.99955689082663,2.42955395046775,0.61245399607477,0.479227355091182,0.919218786610021,2.20231761998777,5.61824287574826,6.45147439676223,0.923204014111357,0.365950574409639,1.56274011167028,5.58365998002762,2.25105044012672,4.12555268997387,3.24091444021034,3.13217697758026,1.67759501242771,0,0.151143120213571,0.869593466105033,0.860423876981386,0,2.15881276655127,0,0.896053774194671,0.561777680527007,1.87473354835864,1.55871602761721,2.12003744706204,0.985903938436763,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.94112595522402,0.517875767294343,7.27366481417641,0.346970653532272,1.82679286987285,0.922461989024234,1.50722640552623,2.11659672844269,3.76999773989026,0.741584903203122,0.578397427679647,0,0.485300549842228,0.441683036920787,0.484875253135222,0,5.5628351432194,4.81727425670947,0.255457055208591,1.67741174308288,0.599902730993408,1.39777249780371,5.39246301857362,6.8625090422794,0.628271760564322,13.7321212951898,10.4843337505436,4.77912502486988,6.65189178577806,1.01839363850316,1.61729061793121,0.252722758433675,0.631325567659422,0.260240885925407,0.459804208866946,0.360124259610698,0.90422890701429,0.340182495756639,1.15302348256365,1.3118241438362,1.03481348295606,0,0.945530400839096,0.879755620819744,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,1.39323986772945,0.702213187313235,1.54408744268829,2.27330799516474,0.414251545071004,0.234526059981096,0.720248245844059,0.473489471170421,0,0.925602677324269,0.697601834251224,0,0.350296027101508,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0.402619256281115,12.4071069652835,2.26390147234426,0,0,0.853153002140936,0.232236671860439,0.644337306610467,1.00841762311671,0.667134131534611,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0.994782360205754,0,0,0.216138049874694,0.398282546508734,0.948339504765408,1.14248512609729,1.1270773567308,0.814605311381257,0.193952487167626,0.701358198903186,1.07502113111237,1.03327103585722,1.72698600625512,1.1105744752962,0.592905254174298,0.333690211432188,0.589676985339609,0.674586337154561,0.202860121388503,0.482354319504834,1.2731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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=53623
|HGNC=
|TSSclassifier=NA
|UniProt=Q3TTV2
|association_with_transcript=-20bp_to_ENSMUST00000128197,uc009taj.1_5end
|cluster_id=chrX:38753982..38754010,+
|description=CAGE_peak_4_at_Gria3_5end
|id=chrX:38753982..38754010,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.66e-18!73;UBERON:0005743!5.66e-18!73;UBERON:0000073!1.77e-16!75;UBERON:0001016!1.77e-16!75;UBERON:0004121!4.90e-15!102;UBERON:0000924!4.90e-15!102;UBERON:0006601!4.90e-15!102;UBERON:0002346!5.03e-13!71;UBERON:0003075!5.03e-13!71;UBERON:0007284!5.03e-13!71;UBERON:0001049!7.64e-13!52;UBERON:0005068!7.64e-13!52;UBERON:0006241!7.64e-13!52;UBERON:0007135!7.64e-13!52;UBERON:0000955!3.39e-12!50;UBERON:0006238!3.39e-12!50;UBERON:0002616!1.03e-11!49;UBERON:0002020!1.47e-10!34;UBERON:0000033!1.72e-10!63;UBERON:0000475!2.38e-09!200;UBERON:0004111!4.10e-09!122;UBERON:0000025!4.36e-09!114;UBERON:0002791!1.46e-08!29;UBERON:0003528!1.46e-08!29;UBERON:0001893!1.46e-08!29;UBERON:0002619!5.49e-08!17;UBERON:0002021!5.59e-08!10;UBERON:0000411!5.59e-08!10;UBERON:0001950!5.59e-08!10;UBERON:0003080!7.13e-08!40;UBERON:0002780!1.99e-07!39;UBERON:0001890!1.99e-07!39;UBERON:0006240!1.99e-07!39;UBERON:0000956!2.00e-07!21;UBERON:0001869!2.00e-07!21;UBERON:0000203!2.00e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.02e-17,73;UBERON:0001016,1.12e-16,75;UBERON:0000073,1.52e-13,54;UBERON:0001049,1.96e-12,52;UBERON:0005068,1.96e-12,52;UBERON:0006241,1.96e-12,52;UBERON:0007135,1.96e-12,52;UBERON:0004121,7.15e-12,95;UBERON:0000924,7.15e-12,95;UBERON:0006601,7.15e-12,95;UBERON:0002346,1.12e-10,64;UBERON:0003075,1.12e-10,64;UBERON:0007284,1.12e-10,64;UBERON:0002020,1.50e-10,34;UBERON:0000955,5.52e-10,47;UBERON:0006238,5.52e-10,47;UBERON:0002021,7.37e-10,10;UBERON:0000411,7.37e-10,10;UBERON:0001950,7.37e-10,10;UBERON:0002616,1.89e-09,46;UBERON:0010371,8.75e-09,73;UBERON:0002619,9.10e-09,17;UBERON:0003528,3.90e-08,29;UBERON:0002791,3.90e-08,29;UBERON:0001893,3.90e-08,29;UBERON:0003076,5.01e-08,12;UBERON:0003057,5.01e-08,12;UBERON:0000956,2.56e-07,21;UBERON:0001869,2.56e-07,21;UBERON:0000203,2.56e-07,21;UBERON:0000025,4.47e-07,114;UBERON:0004111,9.17e-07,122
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.36069264241712,0.297872853602656,1.04479915655574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0,6.29484089877886,4.56196190487815,2.0190142737785,1.56478268869608,1.52617609466313,1.5378032791413,3.30530828426282,0.979904951377538,1.43752564364972,0,0.725362142011344,1.00828139742739,0,0.573066879877513,0.515672092277442,1.41621522601718,1.05798195854407,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,1.53687322128622,0.518448061542388,0.810035629990144,0.630974884054146,1.99955689082663,2.42955395046775,0.61245399607477,0.479227355091182,0.919218786610021,2.20231761998777,5.61824287574826,6.45147439676223,0.923204014111357,0.365950574409639,1.56274011167028,5.58365998002762,2.25105044012672,4.12555268997387,3.24091444021034,3.13217697758026,1.67759501242771,0,0.151143120213571,0.869593466105033,0.860423876981386,0,2.15881276655127,0,0.896053774194671,0.561777680527007,1.87473354835864,1.55871602761721,2.12003744706204,0.985903938436763,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.94112595522402,0.517875767294343,7.27366481417641,0.346970653532272,1.82679286987285,0.922461989024234,1.50722640552623,2.11659672844269,3.76999773989026,0.741584903203122,0.578397427679647,0,0.485300549842228,0.441683036920787,0.484875253135222,0,5.5628351432194,4.81727425670947,0.255457055208591,1.67741174308288,0.599902730993408,1.39777249780371,5.39246301857362,6.8625090422794,0.628271760564322,13.7321212951898,10.4843337505436,4.77912502486988,6.65189178577806,1.01839363850316,1.61729061793121,0.252722758433675,0.631325567659422,0.260240885925407,0.459804208866946,0.360124259610698,0.90422890701429,0.340182495756639,1.15302348256365,1.3118241438362,1.03481348295606,0,0.945530400839096,0.879755620819744,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,1.39323986772945,0.702213187313235,1.54408744268829,2.27330799516474,0.414251545071004,0.234526059981096,0.720248245844059,0.473489471170421,0,0.925602677324269,0.697601834251224,0,0.350296027101508,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0.402619256281115,12.4071069652835,2.26390147234426,0,0,0.853153002140936,0.232236671860439,0.644337306610467,1.00841762311671,0.667134131534611,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0.994782360205754,0,0,0.216138049874694,0.398282546508734,0.948339504765408,1.14248512609729,1.1270773567308,0.814605311381257,0.193952487167626,0.701358198903186,1.07502113111237,1.03327103585722,1.72698600625512,1.1105744752962,0.592905254174298,0.333690211432188,0.589676985339609,0.674586337154561,0.202860121388503,0.482354319504834,1.2731292589071,1.43848068725405,0.972811360650212,0.823684239564244,12.9391385874619,2.60498663367952,2.80833905803104,2.27320990152401,2.69096120282868,1.92977408545347,1.84753190166605,0.37898282354097,0.977789858652155,0.509235257325564,0.938760993154008,1.00503754465089,1.6663054862021,0.975668239288994,0.788175720530955,1.99318220683897,1.11618338060241,2.62181303545181,0.518054945597687,1.73578870297814,0,0,0,0.827810238914197,7.86697890940181,5.50894926983355,0.327869890753351,1.00988370881749,1.26203287766503,1.17131623288992,1.29254038639679,0.955875191810208,1.78238939265915,1.69845918473299,1.21443210502468,2.04579100537918,3.55759000151871,3.85585579706168,0.851640511249612,2.67098405500883,1.30309567482861,1.48473110675282,2.65490276679926,1.21390318077491,0.604647113929502,0.565815239267694,1.47650946440386,1.84461088766356,1.29214146584111,1.45413491791002,1.06949213515416,5.05658812697306,7.37930260024991,8.25084345985495,0.340439605753788,0.540183282093931,0,0.857348140126369,0.532020700926821,0.891844088010353,0.822745103010605,1.2178597964584,0.23467170806371,0,0.661585194164886,1.6488625294148,0.807322133479528,0.241251699712623,0.835606408021955,0.492422699235184,1.45740418314925,7.04616147639937,0.170870880797853,0.82554747185289,0.740778109478847,0.188368457004691,0,0.228778173206523,0.509935289981566,0.69975726161829,0.552799895217695,0,0.790839983952838,1.82987520414164,0.432021363287205,0.418176592028937,0.218362563746178,0.674321731924103,0.826534557253359,0.523511883968059,0.90730481304255,2.4853572523477,0.56369293868419,0.299033092087958,0.66183396182839,0.583353565032143,0.258319646955462,0.675824501963113,1.29092962510329,0.651021924219751,1.15345278868282,0.241584120826006,0.864090018773596,0,1.01362607645082,0.924398614483445,1.03936658382236,1.43221356533985,0.39736270956253,0.360586348559907,0.443068581523732,0.302899349844443,0.15241361331,0.100826185136841,0.292373642219257,0.384847366561318,0.116876902181569,0,0,0,0,1.15913756419314,1.50145980360946,1.28206136987086,0.643105137237198,0.501572104035363,8.471277639256,11.9684561491866,7.44764167471216,17.8727309637435,8.90607275701835,7.55393897389701,8.77529250301348,10.8077088773813,10.4222754066367,9.31968561153276,0,1.59609949360412,1.36586884603307,0.486213434136588,0.419226325255965,0.183843508450014,1.77797382241292,0.824140228955577,1.92551525755089,0.758091635291392,0.25347929989024,1.50901073108861,1.49826411951812,1.21647789569252,1.37845125493472,1.90517476513229,0.927074607558844,0.77163688185482,1.64834360321323,0.735994600671987,0.685738504770831,0.532427418478012,0.476872379894642,1.74415699958794,0.941093804153306,1.18460451048347,1.09756783723664,0.789209134313529,1.08643291076689,0,1.42362021749009,0.689531376628944,1.22769312950907,1.39443157067369,1.35034627686799,0.499621155875892,0.935726433781634,1.07435527024149,0,0.661774257358546,0.463735671240843
|short_description=p4@Gria3
}}

Latest revision as of 20:32, 1 October 2015

Short description:p4@Gria3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Gria3_5end
Coexpression cluster:NA
Association with transcript: -20bp_to_ENSMUST00000128197, uc009taj.1_5end
EntrezGene:Gria3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Gria3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.56
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D77.27
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I33.77
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D513.73
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B26.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E812.41
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A35.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.02e-1773
nervous system1.12e-1675
regional part of nervous system1.52e-1354
neural tube1.96e-1252
neural rod1.96e-1252
future spinal cord1.96e-1252
neural keel1.96e-1252
ectoderm-derived structure7.15e-1295
ectoderm7.15e-1295
presumptive ectoderm7.15e-1295
neurectoderm1.12e-1064
neural plate1.12e-1064
presumptive neural plate1.12e-1064
gray matter1.50e-1034
brain5.52e-1047
future brain5.52e-1047
occipital lobe7.37e-1010
visual cortex7.37e-1010
neocortex7.37e-1010
regional part of brain1.89e-0946
ecto-epithelium8.75e-0973
regional part of cerebral cortex9.10e-0917
brain grey matter3.90e-0829
regional part of telencephalon3.90e-0829
telencephalon3.90e-0829
posterior neural tube5.01e-0812
chordal neural plate5.01e-0812
cerebral cortex2.56e-0721
cerebral hemisphere2.56e-0721
pallium2.56e-0721
tube4.47e-07114
anatomical conduit9.17e-07122
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