FFCP PHASE1:Mm9::chr16:30064250..30064282,+: Difference between revisions
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{{FFCP|EntrezGene=15205|HGNC=|MCL_coexpression_id=366|UniProt=|association_with_transcript=-187bp_to_ENSMUST00000160592_5end|description=CAGE_peak_6_at_Hes1_5end|id=chr16:30064250..30064282,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,1.96e-21,25;CL:0002563,3.74e-19,9;CL:0002251,3.74e-19,9;CL:0000223,2.35e-16,20;CL:0002076,4.20e-16,15;CL:0000075,7.62e-16,7;CL:0000239,8.77e-11,6;CL:0000677,8.77e-11,6;CL:0000584,8.77e-11,6;CL:0002250,2.17e-10,3;CL:0002321,9.18e-09,70;CL:0000213,1.56e-08,1;CL:0002078,1.56e-08,1;CL:0000115,1.56e-08,1;CL:0002262,1.56e-08,1;CL:1000398,1.56e-08,1;CL:0000710,3.50e-08,1;CL:0002077,3.50e-08,1;CL:0005014,3.50e-08,1;CL:0002315,3.50e-08,1;CL:0002490,3.50e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!1.01e-07!26;UBERON:0000990!1.01e-07!26;UBERON:0003101!5.56e-07!16;UBERON:0000079!5.56e-07!16;UBERON:0003133!6.93e-07!24;UBERON:0004176!7.84e-07!17;UBERON:0009196!7.84e-07!17;UBERON:0009117!7.84e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000485,2.80e-22,11;UBERON:0003350,3.74e-19,9;UBERON:0004808,3.74e-19,9;UBERON:0001277,3.74e-19,9;UBERON:0001242,2.84e-13,13;UBERON:0001262,2.84e-13,13;UBERON:0004786,2.84e-13,13;UBERON:0000344,1.67e-11,15;UBERON:0002394,1.56e-08,1;UBERON:0001281,1.56e-08,1;UBERON:0000353,1.56e-08,1;UBERON:0003497,1.56e-08,1;UBERON:0003909,1.56e-08,1;UBERON:0003928,1.56e-08,1;UBERON:0003835,1.56e-08,1;UBERON:0003513,1.56e-08,1;UBERON:0001280,1.56e-08,1;UBERON:0004647,1.56e-08,1;UBERON:0002294,1.56e-08,1;UBERON:0001173,1.56e-08,1;UBERON:0004912,1.56e-08,1;UBERON:0005171,1.56e-08,1;UBERON:0000996,7.68e-08,1;UBERON:0004923,3.64e-07,24|phase1_expression=0.640595388419176,0.697950815278722,0,0.90739263392049,2.50447864973174,1.17515490338323,1.16806320297763,0,0,0,0.171217968225505,0.159544317990673,0,0,0,0,0.699561878128147,0,0.137114433605739,0,0.17008658030214,0,0,0,0.22940928106717,1.72269589234506,0,0.646413698057667,0.380046838912748,0,0,0.635030673459631,0,0,1.73310971850765,0,4.08338712524738,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0.436050312760893,0,0,0,1.43752564364972,0.167782606057736,0,0,0.257259436035947,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0.52091337055676,0.279182999001381,0,0,0,0,0.186399445825301,0.227178579999552,0.0755715601067855,6.37701875143691,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0,1.69012103732017,0,0,0,0.432982082022428,1.01343946190039,0,0,0,0.148442139064825,0,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0.239630249011841,0,0,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.373220911830279,0.252722758433675,0.210441855886474,0.390361328888111,0.689706313300419,0.180062129805349,0,0.408218994907967,0,0.374806898238915,0,0.431135985865684,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.61734640922383,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0,0,0,0,0,0,0.342745537829186,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.126473074248515,0.590440591918409,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.637819074629948,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.81443479676788,0.329940245945071,0,0,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,0.340439605753788,0,0.517434735131018,0.428674070063185,0,0.178368817602071,0,0.304464949114599,0.23467170806371,0,0.441056796109924,0.49465875882444,0,0.542816324353403,0.119372344003136,0.820704498725306,0,0.18542530201051,0,0,0,0,0,0.457556346413045,0.849892149969277,0.979660166265606,0.552799895217695,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.496375471371293,0.583353565032143,0.774958940866387,1.18269287843545,0.704143431874524,0.2604087696879,0.209718688851422,0.724752362478018,0.288030006257865,0,0.202725215290164,0.102710957164827,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0,0,0,0,0,0,0.226730383615211,0,0.269141569828427,0,0,0.187682475451182,0.183151624267265,1.07184189539533,0.501572104035363,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0,0,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.128050304809739,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15205 | |||
|HGNC= | |||
|MCL_coexpression_id=366 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-187bp_to_ENSMUST00000160592_5end | |||
|cluster_id=chr16:30064250..30064282,+ | |||
|description=CAGE_peak_6_at_Hes1_5end | |||
|id=chr16:30064250..30064282,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.96e-21,25;CL:0002563,3.74e-19,9;CL:0002251,3.74e-19,9;CL:0000223,2.35e-16,20;CL:0002076,4.20e-16,15;CL:0000075,7.62e-16,7;CL:0000239,8.77e-11,6;CL:0000677,8.77e-11,6;CL:0000584,8.77e-11,6;CL:0002250,2.17e-10,3;CL:0002321,9.18e-09,70;CL:0000213,1.56e-08,1;CL:0002078,1.56e-08,1;CL:0000115,1.56e-08,1;CL:0002262,1.56e-08,1;CL:1000398,1.56e-08,1;CL:0000710,3.50e-08,1;CL:0002077,3.50e-08,1;CL:0005014,3.50e-08,1;CL:0002315,3.50e-08,1;CL:0002490,3.50e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.01e-07!26;UBERON:0000990!1.01e-07!26;UBERON:0003101!5.56e-07!16;UBERON:0000079!5.56e-07!16;UBERON:0003133!6.93e-07!24;UBERON:0004176!7.84e-07!17;UBERON:0009196!7.84e-07!17;UBERON:0009117!7.84e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000485,2.80e-22,11;UBERON:0003350,3.74e-19,9;UBERON:0004808,3.74e-19,9;UBERON:0001277,3.74e-19,9;UBERON:0001242,2.84e-13,13;UBERON:0001262,2.84e-13,13;UBERON:0004786,2.84e-13,13;UBERON:0000344,1.67e-11,15;UBERON:0002394,1.56e-08,1;UBERON:0001281,1.56e-08,1;UBERON:0000353,1.56e-08,1;UBERON:0003497,1.56e-08,1;UBERON:0003909,1.56e-08,1;UBERON:0003928,1.56e-08,1;UBERON:0003835,1.56e-08,1;UBERON:0003513,1.56e-08,1;UBERON:0001280,1.56e-08,1;UBERON:0004647,1.56e-08,1;UBERON:0002294,1.56e-08,1;UBERON:0001173,1.56e-08,1;UBERON:0004912,1.56e-08,1;UBERON:0005171,1.56e-08,1;UBERON:0000996,7.68e-08,1;UBERON:0004923,3.64e-07,24 | |||
|phase1_expression=0.640595388419176,0.697950815278722,0,0.90739263392049,2.50447864973174,1.17515490338323,1.16806320297763,0,0,0,0.171217968225505,0.159544317990673,0,0,0,0,0.699561878128147,0,0.137114433605739,0,0.17008658030214,0,0,0,0.22940928106717,1.72269589234506,0,0.646413698057667,0.380046838912748,0,0,0.635030673459631,0,0,1.73310971850765,0,4.08338712524738,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0.436050312760893,0,0,0,1.43752564364972,0.167782606057736,0,0,0.257259436035947,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0.52091337055676,0.279182999001381,0,0,0,0,0.186399445825301,0.227178579999552,0.0755715601067855,6.37701875143691,0,0,0,0,0,0.140444420131752,0.340860645156116,0.259786004602869,0,1.69012103732017,0,0,0,0.432982082022428,1.01343946190039,0,0,0,0.148442139064825,0,0,0.230615497256059,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0.239630249011841,0,0,0,0,0,0.173824320192276,0,0,0,0.203678727700633,0.373220911830279,0.252722758433675,0.210441855886474,0.390361328888111,0.689706313300419,0.180062129805349,0,0.408218994907967,0,0.374806898238915,0,0.431135985865684,0,0.175951124163949,0.219195732427575,0.556094498451196,0,0.61734640922383,0,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0,0,0,0,0,0,0.342745537829186,0,0.407302655690628,0.193952487167626,0.0701358198903186,0.126473074248515,0.590440591918409,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0.189491411770485,0,0,0,0.335012514883631,0,0,0.157635144106191,0,0.637819074629948,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0.283076530788832,0,0,0,0.321321316421807,0.141940085208269,0.178065603667255,0.81443479676788,0.329940245945071,0,0,0,0,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,0.340439605753788,0,0.517434735131018,0.428674070063185,0,0.178368817602071,0,0.304464949114599,0.23467170806371,0,0.441056796109924,0.49465875882444,0,0.542816324353403,0.119372344003136,0.820704498725306,0,0.18542530201051,0,0,0,0,0,0.457556346413045,0.849892149969277,0.979660166265606,0.552799895217695,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.496375471371293,0.583353565032143,0.774958940866387,1.18269287843545,0.704143431874524,0.2604087696879,0.209718688851422,0.724752362478018,0.288030006257865,0,0.202725215290164,0.102710957164827,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0,0,0,0,0,0,0.226730383615211,0,0.269141569828427,0,0,0.187682475451182,0.183151624267265,1.07184189539533,0.501572104035363,0,0,0,0.515559547031063,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0,0,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.128050304809739,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p6@Hes1 | |||
}} |
Latest revision as of 20:40, 1 October 2015
Short description: | p6@Hes1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Hes1_5end |
Coexpression cluster: | MCL_coexpression_mm9:366 |
Association with transcript: | -187bp_to_ENSMUST00000160592_5end |
EntrezGene: | Hes1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.96e-21 | 25 |
intestinal epithelial cell | 3.74e-19 | 9 |
epithelial cell of alimentary canal | 3.74e-19 | 9 |
endodermal cell | 2.35e-16 | 20 |
endo-epithelial cell | 4.20e-16 | 15 |
columnar/cuboidal epithelial cell | 7.62e-16 | 7 |
brush border epithelial cell | 8.77e-11 | 6 |
gut absorptive cell | 8.77e-11 | 6 |
enterocyte | 8.77e-11 | 6 |
intestinal crypt stem cell | 2.17e-10 | 3 |
embryonic cell | 9.18e-09 | 70 |
lining cell | 1.56e-08 | 1 |
meso-epithelial cell | 1.56e-08 | 1 |
endothelial cell | 1.56e-08 | 1 |
endothelial cell of sinusoid | 1.56e-08 | 1 |
endothelial cell of hepatic sinusoid | 1.56e-08 | 1 |
neurecto-epithelial cell | 3.50e-08 | 1 |
ecto-epithelial cell | 3.50e-08 | 1 |
auditory epithelial support cell | 3.50e-08 | 1 |
supporting cell of cochlea | 3.50e-08 | 1 |
organ of Corti supporting cell | 3.50e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
simple columnar epithelium | 2.80e-22 | 11 |
epithelium of mucosa | 3.74e-19 | 9 |
gastrointestinal system epithelium | 3.74e-19 | 9 |
intestinal epithelium | 3.74e-19 | 9 |
intestinal mucosa | 2.84e-13 | 13 |
wall of intestine | 2.84e-13 | 13 |
gastrointestinal system mucosa | 2.84e-13 | 13 |
mucosa | 1.67e-11 | 15 |
bile duct | 1.56e-08 | 1 |
hepatic sinusoid | 1.56e-08 | 1 |
parenchyma | 1.56e-08 | 1 |
abdomen blood vessel | 1.56e-08 | 1 |
sinusoid | 1.56e-08 | 1 |
digestive system duct | 1.56e-08 | 1 |
abdominal segment blood vessel | 1.56e-08 | 1 |
trunk blood vessel | 1.56e-08 | 1 |
liver parenchyma | 1.56e-08 | 1 |
liver lobule | 1.56e-08 | 1 |
biliary system | 1.56e-08 | 1 |
biliary tree | 1.56e-08 | 1 |
biliary bud | 1.56e-08 | 1 |
hepatic duct | 1.56e-08 | 1 |
vagina | 7.68e-08 | 1 |
organ component layer | 3.64e-07 | 24 |