FFCP PHASE1:Mm9::chrX:48558950..48559016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=171170 | |EntrezGene=171170 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3TJQ3,Q8BYC7,Q542D8,Q8R003 | |UniProt=Q3TJQ3,Q8BYC7,Q542D8,Q8R003 | ||
|association_with_transcript=0bp_to_ENSMUST00000114875,ENSMUST00000165973,NM_134163,uc009tdu.1,uc009tdv.1_5end | |association_with_transcript=0bp_to_ENSMUST00000114875,ENSMUST00000165973,NM_134163,uc009tdu.1,uc009tdv.1_5end | ||
|cluster_id=chrX:48558950..48559016,- | |||
|description=CAGE_peak_1_at_Mbnl3_5end | |description=CAGE_peak_1_at_Mbnl3_5end | ||
|id=chrX:48558950..48559016,- | |id=chrX:48558950..48559016,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.92e-12!41;UBERON:0001004!9.77e-12!42;UBERON:0004177!3.63e-11!29;UBERON:0002370!5.50e-10!23;UBERON:0000974!5.50e-10!23;UBERON:0004807!5.50e-10!23;UBERON:0005058!5.50e-10!23;UBERON:0003351!5.50e-10!23;UBERON:0009113!5.50e-10!23;UBERON:0003295!5.50e-10!23;UBERON:0009722!5.50e-10!23;UBERON:0005562!5.50e-10!23;UBERON:0007690!5.50e-10!23;UBERON:0000072!1.99e-09!27;UBERON:0006562!2.09e-09!24;UBERON:0001557!2.09e-09!24;UBERON:0001042!2.09e-09!24;UBERON:0008814!2.09e-09!24;UBERON:0009145!2.09e-09!24;UBERON:0000926!2.59e-09!193;UBERON:0004120!2.59e-09!193;UBERON:0006603!2.59e-09!193;UBERON:0003408!4.01e-09!24;UBERON:0000077!1.85e-08!97;UBERON:0001048!2.89e-08!147;UBERON:0001041!6.27e-08!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.06e-12,41;UBERON:0001004,7.37e-12,42;UBERON:0004177,2.14e-11,29;UBERON:0005057,2.14e-11,29;UBERON:0000077,3.48e-11,35;UBERON:0002370,3.45e-10,23;UBERON:0000974,3.45e-10,23;UBERON:0004807,3.45e-10,23;UBERON:0005058,3.45e-10,23;UBERON:0003351,3.45e-10,23;UBERON:0009113,3.45e-10,23;UBERON:0003295,3.45e-10,23;UBERON:0009722,3.45e-10,23;UBERON:0005562,3.45e-10,23;UBERON:0007690,3.45e-10,23;UBERON:0000072,1.29e-09,27;UBERON:0006562,1.36e-09,24;UBERON:0001557,1.36e-09,24;UBERON:0001042,1.36e-09,24;UBERON:0008814,1.36e-09,24;UBERON:0009145,1.36e-09,24;UBERON:0003408,3.61e-09,24;UBERON:0001041,3.01e-08,80;UBERON:0000153,3.64e-08,43;UBERON:0001048,5.52e-08,134;UBERON:0000926,6.43e-07,120;UBERON:0004120,6.43e-07,120;UBERON:0006603,6.43e-07,120;UBERON:0003081,7.57e-07,87 | |||
|phase1_expression=0.80074423552397,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,2.01455126294268,2.33612640595526,6.97265946584512,6.61706994112834,5.38348410540585,3.76679530096111,4.06838010876216,3.76641605848653,2.97229368224591,2.99798785634096,2.63217847606774,3.49780939064073,1.26184866143295,0.411343300817216,0.84877930359606,0.850432901510698,1.98581902401771,1.30599894569468,1.43993180514066,1.60586496747019,0.57423196411502,3.4460959692726,1.72376986148711,0.950117097281869,1.76421090831952,1.55211357458713,1.90509202037889,0.61506478758457,0,2.3108129580102,1.32987716286794,1.63335485009895,6.27797446105362,3.906676722619,11.5175223674236,9.41170380849623,17.7591826089196,10.1957174136542,1.51076181570693,1.21652317463417,3.85448179539531,0,0,0.219686182734472,0,0,0,1.67782606057736,5.07753499407941,2.68875039313971,0.771778308107841,2.0057340795713,1.54701627683233,0.809265843438391,0.528990979272033,0,0,0.889294796111139,0,0,1.4209602298922,0,0,0.518448061542388,0.405017814995072,0,0,0.441737081903227,0.244981598429908,0.479227355091182,0.919218786610021,0,0,0,0,0.365950574409639,0,0,0,0.15279824777681,0.589257170947335,0.996601765593721,0.931997229126503,0.075726193333184,0.302286240427142,2.02905142091174,1.72084775396277,0,0,0,0.448026887097336,0.702222100658759,10.9075406449957,5.45550609666024,6.00677276667578,0.985903938436763,2.56652954828636,2.54805239706646,7.11066703153331,2.38140145112336,3.54703811665138,3.53867111510348,0.79928715803342,2.84831672011889,0.890652834388949,1.90833859442749,0.608930956624282,0.691846491768175,1.05505848386836,1.64624189989987,0.628332956648377,3.21353458054686,0.144599356919912,1.76922110389975,1.94120219936891,3.3126227769059,1.93950101254089,5.59175283654366,0,0,1.27728527604296,10.4239158320151,3.59941638596045,9.65733725755292,0,0,0,0,0.255715457330331,0,0,6.21220119486929,1.8661045591514,2.0217820674694,3.36706969418358,3.90361328888111,4.13823787980251,4.14142898552303,1.9591626318643,2.31324097114515,0.896796041993948,0.937017245597288,0.517406741478031,2.58681591519411,9.45530400839096,9.32540958068929,12.0557652835166,10.8438427197983,6.268538997399,6.79081050146213,12.9372273432021,8.42655824775882,6.69104558498259,6.81992398549422,6.42089894860056,8.20841209933837,5.04173772090842,5.20838418287463,5.3126342571799,5.09081472528348,3.48800917125612,1.60964040839772,2.21854150497622,1.81015834904829,1.14917224855367,0.243206428637567,0.146199987425332,0.439100230582101,0.805238512562231,0,0.205809224758569,0.330418782983798,2.11560453330835,7.03851226766272,7.43157349953403,5.54130083685001,2.8235693447268,4.00280478920767,2.28270751335071,1.89811624617805,2.63518327558417,1.00534083520108,2.78539060857611,1.75467678407208,0.898819408654221,1.51296634912286,1.1948476395262,2.46568271239006,4.56994050438915,5.63538678365402,3.46207257337034,3.49114476901726,3.50679099451593,2.90888070771584,1.03327103585722,0.627994911365499,0.370191491765402,0.592905254174298,2.33583148002532,3.53806191203765,4.72210436008193,3.44862206360455,1.68824011826692,2.5462585178142,2.5892652370573,2.91843408195064,1.09824565275233,1.43768206527355,2.23284568601102,1.87222603868736,1.01031551178845,0.358794827043824,0,1.84753190166605,4.54779388249163,7.82231886921724,8.82674446030978,8.44884893838608,11.0554129911598,10.2358765580986,5.65887578787617,8.03939234941574,7.0868700687608,5.89982644032702,1.14704320301017,2.59027472798843,1.15719246865209,0,0,1.47529281905711,0.275936746304732,0,0,0,0.252470927204373,0.94652465824877,1.17131623288992,1.93881057959519,1.91175038362042,0.668396022247182,1.41538265394416,0.809621403349789,0.584511715822624,0,0.321321316421807,1.98716119291576,4.45164009168138,7.81857404897165,1.15479086080775,1.32745138339963,6.5550771761845,3.93020624054176,3.20628635585027,0.590603785761546,2.15204603560749,3.6179961043551,3.27180356529755,2.85197902707777,1.26414703174326,1.05418608574999,2.06271086496374,0.680879211507576,5.76195500900193,2.8458910432206,5.35842587578981,8.15765074754458,3.21063871683727,2.96188237083818,1.522324745573,7.74416636610244,8.04961869282517,0.441056796109924,1.97863503529776,4.35953952078945,5.30753739367772,4.05865969610664,4.76008609260678,1.7488850197791,0,3.07567585436135,5.77883230297023,6.48180845793991,4.33247451110789,4.64760374251486,3.20289442489132,10.0287273696375,8.95689294871411,10.5031980091362,0.954670618015114,8.22473583310952,5.89626454667861,4.86024033698106,3.97267762427491,3.9305261474312,2.83215127408124,2.39695021603474,1.83229159388821,1.03691978633434,0.621339313086926,2.81846469342095,7.7748603942869,4.30192075188454,3.11121901350476,2.0665571756437,2.70329800785245,4.3422178298929,4.29674469985035,5.97698263226552,1.69108884578204,2.59227005632079,7.90027801570446,4.25722952109345,5.6491026440655,10.0039033692902,12.3528420010562,11.5235185773134,13.1013039976766,16.0981584620289,12.5198397935703,12.04067545149,13.2082302529261,10.0381617161945,9.621184164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| |phase1_expression=0.80074423552397,0.348975407639361,0.454999239389536,0.60492842261366,0.500895729946347,2.01455126294268,2.33612640595526,6.97265946584512,6.61706994112834,5.38348410540585,3.76679530096111,4.06838010876216,3.76641605848653,2.97229368224591,2.99798785634096,2.63217847606774,3.49780939064073,1.26184866143295,0.411343300817216,0.84877930359606,0.850432901510698,1.98581902401771,1.30599894569468,1.43993180514066,1.60586496747019,0.57423196411502,3.4460959692726,1.72376986148711,0.950117097281869,1.76421090831952,1.55211357458713,1.90509202037889,0.61506478758457,0,2.3108129580102,1.32987716286794,1.63335485009895,6.27797446105362,3.906676722619,11.5175223674236,9.41170380849623,17.7591826089196,10.1957174136542,1.51076181570693,1.21652317463417,3.85448179539531,0,0,0.219686182734472,0,0,0,1.67782606057736,5.07753499407941,2.68875039313971,0.771778308107841,2.0057340795713,1.54701627683233,0.809265843438391,0.528990979272033,0,0,0.889294796111139,0,0,1.4209602298922,0,0,0.518448061542388,0.405017814995072,0,0,0.441737081903227,0.244981598429908,0.479227355091182,0.919218786610021,0,0,0,0,0.365950574409639,0,0,0,0.15279824777681,0.589257170947335,0.996601765593721,0.931997229126503,0.075726193333184,0.302286240427142,2.02905142091174,1.72084775396277,0,0,0,0.448026887097336,0.702222100658759,10.9075406449957,5.45550609666024,6.00677276667578,0.985903938436763,2.56652954828636,2.54805239706646,7.11066703153331,2.38140145112336,3.54703811665138,3.53867111510348,0.79928715803342,2.84831672011889,0.890652834388949,1.90833859442749,0.608930956624282,0.691846491768175,1.05505848386836,1.64624189989987,0.628332956648377,3.21353458054686,0.144599356919912,1.76922110389975,1.94120219936891,3.3126227769059,1.93950101254089,5.59175283654366,0,0,1.27728527604296,10.4239158320151,3.59941638596045,9.65733725755292,0,0,0,0,0.255715457330331,0,0,6.21220119486929,1.8661045591514,2.0217820674694,3.36706969418358,3.90361328888111,4.13823787980251,4.14142898552303,1.9591626318643,2.31324097114515,0.896796041993948,0.937017245597288,0.517406741478031,2.58681591519411,9.45530400839096,9.32540958068929,12.0557652835166,10.8438427197983,6.268538997399,6.79081050146213,12.9372273432021,8.42655824775882,6.69104558498259,6.81992398549422,6.42089894860056,8.20841209933837,5.04173772090842,5.20838418287463,5.3126342571799,5.09081472528348,3.48800917125612,1.60964040839772,2.21854150497622,1.81015834904829,1.14917224855367,0.243206428637567,0.146199987425332,0.439100230582101,0.805238512562231,0,0.205809224758569,0.330418782983798,2.11560453330835,7.03851226766272,7.43157349953403,5.54130083685001,2.8235693447268,4.00280478920767,2.28270751335071,1.89811624617805,2.63518327558417,1.00534083520108,2.78539060857611,1.75467678407208,0.898819408654221,1.51296634912286,1.1948476395262,2.46568271239006,4.56994050438915,5.63538678365402,3.46207257337034,3.49114476901726,3.50679099451593,2.90888070771584,1.03327103585722,0.627994911365499,0.370191491765402,0.592905254174298,2.33583148002532,3.53806191203765,4.72210436008193,3.44862206360455,1.68824011826692,2.5462585178142,2.5892652370573,2.91843408195064,1.09824565275233,1.43768206527355,2.23284568601102,1.87222603868736,1.01031551178845,0.358794827043824,0,1.84753190166605,4.54779388249163,7.82231886921724,8.82674446030978,8.44884893838608,11.0554129911598,10.2358765580986,5.65887578787617,8.03939234941574,7.0868700687608,5.89982644032702,1.14704320301017,2.59027472798843,1.15719246865209,0,0,1.47529281905711,0.275936746304732,0,0,0,0.252470927204373,0.94652465824877,1.17131623288992,1.93881057959519,1.91175038362042,0.668396022247182,1.41538265394416,0.809621403349789,0.584511715822624,0,0.321321316421807,1.98716119291576,4.45164009168138,7.81857404897165,1.15479086080775,1.32745138339963,6.5550771761845,3.93020624054176,3.20628635585027,0.590603785761546,2.15204603560749,3.6179961043551,3.27180356529755,2.85197902707777,1.26414703174326,1.05418608574999,2.06271086496374,0.680879211507576,5.76195500900193,2.8458910432206,5.35842587578981,8.15765074754458,3.21063871683727,2.96188237083818,1.522324745573,7.74416636610244,8.04961869282517,0.441056796109924,1.97863503529776,4.35953952078945,5.30753739367772,4.05865969610664,4.76008609260678,1.7488850197791,0,3.07567585436135,5.77883230297023,6.48180845793991,4.33247451110789,4.64760374251486,3.20289442489132,10.0287273696375,8.95689294871411,10.5031980091362,0.954670618015114,8.22473583310952,5.89626454667861,4.86024033698106,3.97267762427491,3.9305261474312,2.83215127408124,2.39695021603474,1.83229159388821,1.03691978633434,0.621339313086926,2.81846469342095,7.7748603942869,4.30192075188454,3.11121901350476,2.0665571756437,2.70329800785245,4.3422178298929,4.29674469985035,5.97698263226552,1.69108884578204,2.59227005632079,7.90027801570446,4.25722952109345,5.6491026440655,10.0039033692902,12.3528420010562,11.5235185773134,13.1013039976766,16.0981584620289,12.5198397935703,12.04067545149,13.2082302529261,10.0381617161945,9.621184164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| ||
|short_description=p1@Mbnl3 | |short_description=p1@Mbnl3 | ||
}} | }} |
Latest revision as of 21:26, 1 October 2015
Short description: | p1@Mbnl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mbnl3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000114875, ENSMUST00000165973, NM_134163, uc009tdu.1, uc009tdv.1_5end |
EntrezGene: | Mbnl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory tract | 1.06e-12 | 41 |
respiratory system | 7.37e-12 | 42 |
hemopoietic organ | 2.14e-11 | 29 |
immune organ | 2.14e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 3.48e-11 | 35 |
thymus | 3.45e-10 | 23 |
neck | 3.45e-10 | 23 |
respiratory system epithelium | 3.45e-10 | 23 |
hemolymphoid system gland | 3.45e-10 | 23 |
pharyngeal epithelium | 3.45e-10 | 23 |
thymic region | 3.45e-10 | 23 |
pharyngeal gland | 3.45e-10 | 23 |
entire pharyngeal arch endoderm | 3.45e-10 | 23 |
thymus primordium | 3.45e-10 | 23 |
early pharyngeal endoderm | 3.45e-10 | 23 |
segment of respiratory tract | 1.29e-09 | 27 |
pharynx | 1.36e-09 | 24 |
upper respiratory tract | 1.36e-09 | 24 |
chordate pharynx | 1.36e-09 | 24 |
pharyngeal arch system | 1.36e-09 | 24 |
pharyngeal region of foregut | 1.36e-09 | 24 |
gland of gut | 3.61e-09 | 24 |
foregut | 3.01e-08 | 80 |
anterior region of body | 3.64e-08 | 43 |
primordium | 5.52e-08 | 134 |
mesoderm | 6.43e-07 | 120 |
mesoderm-derived structure | 6.43e-07 | 120 |
presumptive mesoderm | 6.43e-07 | 120 |
lateral plate mesoderm | 7.57e-07 | 87 |