FF:10426-106D3: Difference between revisions

Latest revision as of 14:01, 3 June 2020

Name:	epidermoid carcinoma cell line:A431
Species:	Human (Homo sapiens)
Library ID:	CNhs10743
Sample type:	cell lines
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	vulva
dev stage	85 year old adult
sex	female
age	85
cell type	unclassifiable
cell line	A431
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005605

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10743		CAGE		DRX007879		DRR008751

Accession ID Hg19

Library id		BAM		CTSS
CNhs10743		DRZ000176		DRZ001561

Accession ID Hg38

Library id		BAM		CTSS
CNhs10743		DRZ011526		DRZ012911

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.00591
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.545
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0421
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0406
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0.0406
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0681
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0.144
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.173
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.0406
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.961
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.244
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.04
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-1.175183e-4
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0.144
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.112
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.00258
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.0406
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.423
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.0031
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.0406
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.0409
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10743

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0331
MA0003.1	MA0003.1	0.466
MA0004.1	MA0004.1	0.607
MA0006.1	MA0006.1	0.0998
MA0007.1	MA0007.1	0.196
MA0009.1	MA0009.1	0.227
MA0014.1	MA0014.1	0.0961
MA0017.1	MA0017.1	0.884
MA0018.2	MA0018.2	0.704
MA0019.1	MA0019.1	0.548
MA0024.1	MA0024.1	1.30272e-5
MA0025.1	MA0025.1	0.0102
MA0027.1	MA0027.1	0.971
MA0028.1	MA0028.1	0.222
MA0029.1	MA0029.1	0.545
MA0030.1	MA0030.1	0.00928
MA0031.1	MA0031.1	0.105
MA0035.2	MA0035.2	0.0589
MA0038.1	MA0038.1	0.184
MA0039.2	MA0039.2	2.41552e-4
MA0040.1	MA0040.1	0.179
MA0041.1	MA0041.1	0.849
MA0042.1	MA0042.1	0.953
MA0043.1	MA0043.1	0.505
MA0046.1	MA0046.1	0.267
MA0047.2	MA0047.2	0.105
MA0048.1	MA0048.1	0.251
MA0050.1	MA0050.1	1.22104e-4
MA0051.1	MA0051.1	5.47206e-4
MA0052.1	MA0052.1	0.435
MA0055.1	MA0055.1	5.90627e-5
MA0057.1	MA0057.1	0.185
MA0058.1	MA0058.1	0.199
MA0059.1	MA0059.1	0.184
MA0060.1	MA0060.1	3.73957e-5
MA0061.1	MA0061.1	0.838
MA0062.2	MA0062.2	0.465
MA0065.2	MA0065.2	0.381
MA0066.1	MA0066.1	0.369
MA0067.1	MA0067.1	0.445
MA0068.1	MA0068.1	0.704
MA0069.1	MA0069.1	0.793
MA0070.1	MA0070.1	0.721
MA0071.1	MA0071.1	0.372
MA0072.1	MA0072.1	0.371
MA0073.1	MA0073.1	0.745
MA0074.1	MA0074.1	0.208
MA0076.1	MA0076.1	0.42
MA0077.1	MA0077.1	0.26
MA0078.1	MA0078.1	0.765
MA0079.2	MA0079.2	0.308
MA0080.2	MA0080.2	0.00112
MA0081.1	MA0081.1	0.135
MA0083.1	MA0083.1	0.317
MA0084.1	MA0084.1	0.07
MA0087.1	MA0087.1	0.52
MA0088.1	MA0088.1	0.822
MA0090.1	MA0090.1	0.0392
MA0091.1	MA0091.1	7.81161e-4
MA0092.1	MA0092.1	0.207
MA0093.1	MA0093.1	0.575
MA0099.2	MA0099.2	9.18333e-13
MA0100.1	MA0100.1	0.916
MA0101.1	MA0101.1	0.293
MA0102.2	MA0102.2	0.826
MA0103.1	MA0103.1	2.04008e-7
MA0104.2	MA0104.2	0.671
MA0105.1	MA0105.1	0.0809
MA0106.1	MA0106.1	6.35795e-4
MA0107.1	MA0107.1	0.344
MA0108.2	MA0108.2	0.0398
MA0111.1	MA0111.1	0.627
MA0112.2	MA0112.2	0.489
MA0113.1	MA0113.1	0.66
MA0114.1	MA0114.1	0.408
MA0115.1	MA0115.1	0.581
MA0116.1	MA0116.1	0.298
MA0117.1	MA0117.1	0.439
MA0119.1	MA0119.1	0.803
MA0122.1	MA0122.1	0.87
MA0124.1	MA0124.1	0.682
MA0125.1	MA0125.1	0.0325
MA0131.1	MA0131.1	0.55
MA0135.1	MA0135.1	0.0861
MA0136.1	MA0136.1	0.139
MA0137.2	MA0137.2	0.859
MA0138.2	MA0138.2	0.0336
MA0139.1	MA0139.1	0.973
MA0140.1	MA0140.1	0.485
MA0141.1	MA0141.1	0.116
MA0142.1	MA0142.1	0.0784
MA0143.1	MA0143.1	0.92
MA0144.1	MA0144.1	0.511
MA0145.1	MA0145.1	0.228
MA0146.1	MA0146.1	0.15
MA0147.1	MA0147.1	0.537
MA0148.1	MA0148.1	0.00959
MA0149.1	MA0149.1	0.138
MA0150.1	MA0150.1	0.414
MA0152.1	MA0152.1	0.677
MA0153.1	MA0153.1	0.613
MA0154.1	MA0154.1	0.223
MA0155.1	MA0155.1	0.37
MA0156.1	MA0156.1	0.913
MA0157.1	MA0157.1	0.462
MA0159.1	MA0159.1	0.307
MA0160.1	MA0160.1	0.776
MA0162.1	MA0162.1	0.886
MA0163.1	MA0163.1	0.0588
MA0164.1	MA0164.1	0.591
MA0258.1	MA0258.1	0.28
MA0259.1	MA0259.1	0.69

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10743

Novel motif	Logo	P-value
1	1	0.922
10	10	0.551
100	100	0.665
101	101	0.446
102	102	0.397
103	103	0.423
104	104	0.607
105	105	0.23
106	106	0.891
107	107	0.422
108	108	0.898
109	109	0.00855
11	11	0.305
110	110	0.645
111	111	0.574
112	112	0.482
113	113	0.197
114	114	0.207
115	115	0.846
116	116	0.0476
117	117	0.456
118	118	0.72
119	119	0.309
12	12	0.807
120	120	0.995
121	121	0.399
122	122	0.188
123	123	0.782
124	124	0.0764
125	125	0.34
126	126	0.996
127	127	0.68
128	128	0.288
129	129	0.643
13	13	0.00429
130	130	0.467
131	131	0.588
132	132	0.935
133	133	0.0101
134	134	0.28
135	135	0.0104
136	136	0.0237
137	137	0.127
138	138	0.878
139	139	0.00253
14	14	0.771
140	140	0.0569
141	141	0.912
142	142	0.487
143	143	0.0117
144	144	0.133
145	145	0.863
146	146	0.566
147	147	0.674
148	148	0.258
149	149	0.045
15	15	0.373
150	150	0.251
151	151	0.888
152	152	0.116
153	153	0.873
154	154	0.605
155	155	0.732
156	156	0.802
157	157	0.853
158	158	0.494
159	159	0.836
16	16	0.807
160	160	0.631
161	161	0.95
162	162	0.613
163	163	0.796
164	164	0.997
165	165	0.941
166	166	0.374
167	167	0.572
168	168	0.498
169	169	0.222
17	17	0.372
18	18	0.295
19	19	0.0665
2	2	0.979
20	20	0.189
21	21	0.82
22	22	0.75
23	23	0.538
24	24	0.117
25	25	0.773
26	26	0.673
27	27	0.415
28	28	0.289
29	29	0.587
3	3	0.789
30	30	0.207
31	31	0.16
32	32	0.00151
33	33	0.227
34	34	0.58
35	35	0.00265
36	36	0.984
37	37	0.514
38	38	0.662
39	39	0.694
4	4	0.777
40	40	0.185
41	41	0.131
42	42	0.592
43	43	0.262
44	44	0.652
45	45	0.324
46	46	0.501
47	47	0.689
48	48	0.822
49	49	0.109
5	5	0.349
50	50	0.161
51	51	0.816
52	52	0.305
53	53	0.809
54	54	0.905
55	55	0.852
56	56	0.864
57	57	0.715
58	58	0.881
59	59	0.748
6	6	0.312
60	60	0.352
61	61	0.597
62	62	0.408
63	63	0.589
64	64	0.968
65	65	0.333
66	66	0.0574
67	67	0.713
68	68	0.0401
69	69	0.597
7	7	0.487
70	70	0.571
71	71	0.558
72	72	0.986
73	73	0.161
74	74	0.00309
75	75	0.325
76	76	0.814
77	77	0.826
78	78	0.103
79	79	1.43895e-4
8	8	0.468
80	80	0.167
81	81	0.0249
82	82	0.00232
83	83	0.887
84	84	0.962
85	85	0.0607
86	86	0.432
87	87	0.025
88	88	0.841
89	89	0.564
9	9	0.353
90	90	0.0478
91	91	0.0307
92	92	0.113
93	93	0.663
94	94	0.0433
95	95	0.106
96	96	0.114
97	97	0.655
98	98	0.144
99	99	0.345

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10743

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100017 A-431 cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000076 (squamous epithelial cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)
1749 (squamous cell carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000997 (mammalian vulva)
0003134 (female reproductive organ)
0005156 (reproductive structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0005056 (external female genitalia)
0010317 (germ layer / neural crest derived structure)
0004176 (external genitalia)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0102024 (squamous cell carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100017 (A-431 cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|F5samples=
+|DRA_sample_Accession=CAGE@SAMD00005605
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000077,UBERON:0000115,UBERON:0000118,UBERON:0000119,UBERON:0000170,UBERON:0000171,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000915,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0001004,UBERON:0001007,UBERON:0001041,UBERON:0001048,UBERON:0001062,UBERON:0001555,UBERON:0002048,UBERON:0002050,UBERON:0002224,UBERON:0002532,UBERON:0003104,UBERON:0003258,UBERON:0004119,UBERON:0004120,UBERON:0004185,UBERON:0004807,UBERON:0004921,UBERON:0005153,UBERON:0005178,UBERON:0005181,UBERON:0005423,UBERON:0005597,UBERON:0005911,UBERON:0007026,UBERON:0008947,UBERON:0009142
+|accession_numbers=CAGE;DRX007879;DRR008751;DRZ000176;DRZ001561;DRZ011526;DRZ012911
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000076,CL:0000255,CL:0000548
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000997,UBERON:0003134,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0005056,UBERON:0010317,UBERON:0004176,UBERON:0003100,UBERON:0000474
-|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:162,DOID:1749,DOID:305,DOID:4
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000076,CL:0000255
+|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:305,DOID:1749
+|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0102024,FF:0101120,FF:0100017
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
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F1;;chr2:28616358..28616380,+!p3@FOSL2!0.24!7.55!FOSL2;;chr12:80084333..80084380,-!p4@PAWR!0.24!6.86!PAWR;;chr3:5020939..5020952,+!p2@BHLHE40!0.24!4.21!BHLHE40;;chr20:306051..306096,+!p3@SOX12!0.24!3.43!SOX12;;chr19:45250948..45250998,+!p3@BCL3!0.24!3.23!BCL3;;chr6:106534230..106534254,+!p2@PRDM1!0.24!3.14!PRDM1;;chr1:149871171..149871192,+!p4@BOLA1!0.24!2.84!BOLA1;;chr11:62369204..62369217,-!p7@MTA2!0.24!2.65!MTA2;;chr12:3068466..3068495,+!p3@TEAD4!0.24!2.65!TEAD4;;chr4:146402843..146402864,+!p3@SMAD1!0.24!2.35!SMAD1;;chr20:32274150..32274166,-!p2@E2F1!0.24!2.16!E2F1;;chr9:14314106..14314119,-!p5@NFIB!0.24!2.06!NFIB;;chr19:50168861..50168873,-!p3@IRF3!0.24!1.86!IRF3;;chr14:64970451..64970473,-!p6@ZBTB25!0.24!1.76!ZBTB25;;chr20:52185447..52185462,-!p2@ZNF217!0.24!1.67!ZNF217;;chr2:169312600..169312606,+!p2@CERS6!0.24!1.67!CERS6;;chr14:21566882..21566898,-!p3@ZNF219!0.24!1.47!ZNF219;;chr16:88636875..88636886,+!p3@ZC3H18!0.24!1.37!ZC3H18;;chr6:151712922..151712942,-!p6@ZBTB2!0.24!1.27!ZBTB2;;chr1:6640110..6640130,+!p2@ZBTB48!0.24!1.27!ZBTB48;;chr20:49547674..49547685,-!p7@ADNP!0.24!1.27!ADNP;;chr3:129158696..129158703,-!p4@MBD4!0.24!1.18!MBD4;;chr7:127032330..127032356,-!p3@ZNF800!0.24!1.18!ZNF800;;chr11:65430535..65430549,-!p4@RELA!0.24!0.98!RELA;;chr6:44355499..44355514,+!p3@CDC5L!0.24!0.88!CDC5L;;chr1:35658736..35658754,-!p1@SFPQ!0.23!556.60!SFPQ;;chr22:42229100..42229146,+!p1@SREBF2!0.23!152.67!SREBF2;;chr20:49547910..49547988,-!p1@ADNP!0.23!57.33!ADNP;;chr19:42759266..42759290,-!p1@ERF!0.23!48.70!ERF;;chr6:34204921..34204939,+!p3@HMGA1!0.23!46.55!HMGA1;;chr1:90460661..90460745,+!p1@ZNF326!0.23!43.31!ZNF326;;chr17:35766967..35767022,+!p1@TADA2A!0.23!16.56!TADA2A;;chr1:78148324..78148365,-!p2@ZZZ3!0.23!14.01!ZZZ3;;chr20:18269151..18269212,+!p1@ZNF133!0.23!12.45!ZNF133;;chr1:151431647..151431669,-!p2@POGZ!0.23!6.76!POGZ;;chr6:43337255..43337329,-!p2@ZNF318!0.23!3.63!ZNF318;;chr19:52674853..52674892,-!p2@ZNF836!0.23!3.33!ZNF836;;chr1:8763296..8763339,-!p9@RERE!0.23!3.04!RERE;;chr3:12329358..12329393,+!p3@PPARG!0.23!3.04!PPARG;;chr12:133758115..133758138,+!p3@ZNF268!0.23!2.94!ZNF268;;chr3:5021268..5021282,+!p4@BHLHE40!0.23!2.35!BHLHE40;;chr10:114710218..114710229,+!p4@TCF7L2!0.23!2.25!TCF7L2;;chr8:124286670..124286702,-!p3@ZHX1!0.23!1.86!ZHX1;;chr19:57791917..57791937,+!p4@ZNF460!0.23!1.86!ZNF460;;chr17:7388010..7388017,-!p5@ZBTB4!0.23!1.76!ZBTB4;;chr12:19592563..19592585,+!p5@AEBP2!0.23!1.57!AEBP2;;chr6:45390300..45390335,+!p4@RUNX2!0.23!1.57!RUNX2;;chr15:42783275..42783286,-!p5@ZFP106!0.23!1.27!ZFP106;;chr1:41827095..41827155,+!p1@FOXO6!0.23!1.27!FOXO6;;chr11:65687243..65687276,+!p8@DRAP1!0.23!1.27!DRAP1;;chr6:12009042..12009092,+!p6@HIVEP1!0.23!1.18!HIVEP1;;chr1:40997363..40997392,+!p2@ZNF684!0.23!1.18!ZNF684;;chrX:24167800..24167811,+!p3@ZFX!0.23!1.08!ZFX;;chr18:56530573..56530591,+!p9@ZNF532!0.23!1.08!ZNF532;;chr6:151694975..151694979,-!p7@ZBTB2!0.23!0.98!ZBTB2;;chr15:96869511..96869525,+!p16@NR2F2!0.23!0.88!NR2F2;;chr17:46703212..46703238,-!p2@HOXB9!0.23!0.69!HOXB9;;chr17:46806067..46806097,-!p1@HOXB13!0.23!0.69!HOXB13;;chrX:107019181..107019193,-!p10@TSC22D3!0.23!0.69!TSC22D3;;chr9:14314476..14314487,-!p9@NFIB!0.23!0.69!NFIB;;chr10:70320041..70320065,+!p2@TET1!0.23!0.69!TET1;;chr11:45202609..45202623,+!p@chr11:45202609..45202623,+!0.23!0.69!PRDM11;;chr12:80084120..80084136,-!p15@PAWR!0.23!0.69!PAWR;;chr13:41593392..41593403,-!p7@ELF1!0.23!0.69!ELF1;;chr14:35874077..35874091,-!p8@NFKBIA!0.23!0.69!NFKBIA;;chr14:38064495..38064506,-!p4@FOXA1!0.23!0.69!FOXA1;;chr19:45977916..45977932,+!p13@FOSB!0.23!0.69!FOSB;;chr19:45977993..45978005,+!p6@FOSB!0.23!0.69!FOSB;;chr1:24646002..24646013,+!p3@GRHL3!0.23!0.69!GRHL3;;chr1:25256439..25256476,-!p3@RUNX3!0.23!0.69!RUNX3;;chr1:40367692..40367703,-!p3@MYCL1!0.23!0.69!MYCL1;;chr1:47903765..47903783,+!p3@BC169308!0.23!0.69!FOXD2;;chr21:36421401..36421414,-!p16@RUNX1!0.23!0.69!RUNX1;;chr6:1389824..1389840,+!p3@FOXF2!0.23!0.69!FOXF2;;chr7:27205175..27205184,-!p3@HOXA9!0.23!0.69!HOXA9;;chr8:144512897..144512903,-!p1@MAFA!0.23!0.69!MAFA;;chr2:157189617..157189667,-!p4@NR4A2!0.23!0.69!NR4A2;;chr2:172950227..172950249,+!p2@DLX1!0.23!0.69!DLX1;;chr2:176972082..176972096,+!p8@HOXD11!0.23!0.69!HOXD11;;chr3:14061155..14061180,+!p8@TPRXL!0.23!0.69!TPRXL;;chr22:39916558..39916579,+!p1@ATF4!0.22!435.09!ATF4;;chr19:1863568..1863586,-!p1@KLF16!0.22!48.70!KLF16;;chr11:10879593..10879620,-!p1@ZBED5!0.22!46.06!ZBED5;;chr6:170863423..170863484,+!p1@TBP!0.22!30.67!TBP;;chr8:145159415..145159438,+!p2@MAF1!0.22!28.91!MAF1;;chr17:2304333..2304364,-!p1@MNT!0.22!20.28!MNT;;chr9:137218341..137218361,+!p2@RXRA!0.22!5.39!RXRA;;chr3:179040643..179040740,+!p2@ZNF639!0.22!5.00!ZNF639;;chr4:47916543..47916580,-!p2@NFXL1!0.22!4.21!NFXL1;;chr14:64971288..64971316,-!p2@ZBTB25!0.22!3.82!ZBTB25;;chr5:139493727..139493766,+!p4@PURA!0.22!3.63!PURA;;chr15:31618903..31618962,+!p3@KLF13!0.22!3.33!KLF13;;chr1:153939955..153940009,+!p2@CREB3L4!0.22!2.74!CREB3L4;;chr1:23694697..23694756,-!p3@ZNF436!0.22!2.65!ZNF4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+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0010316
 |fonse_cell_line=FF:0101120
 |fonse_cell_line_closure=FF:0101120
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
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-|name=epidermoid carcinoma  cell line:A431
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 |rna_box=106
 |rna_catalog_number=
@@ Line 57: / Line 78: @@
 |rna_weight_ug=57.988
 |sample_age=85
+|sample_category=cell lines
 |sample_cell_catalog=RCB1872
 |sample_cell_line=A431
@@ Line 69: / Line 91: @@
 |sample_ethnicity=unknown
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lumen;3.23858538459786e-73!GO:0031974;membrane-enclosed lumen;3.23858538459786e-73!GO:0003723;RNA binding;4.84524505999962e-72!GO:0043234;protein complex;4.74866992914875e-55!GO:0005739;mitochondrion;6.11342837421196e-55!GO:0016043;cellular component organization and biogenesis;5.18852631211821e-51!GO:0043283;biopolymer metabolic process;6.53486773039772e-51!GO:0006412;translation;8.25196081426254e-51!GO:0019538;protein metabolic process;1.16454042090766e-50!GO:0006396;RNA processing;1.88338198984859e-50!GO:0043228;non-membrane-bound organelle;6.25646337317145e-50!GO:0043232;intracellular non-membrane-bound organelle;6.25646337317145e-50!GO:0031981;nuclear lumen;3.39558559973759e-48!GO:0005840;ribosome;1.757692518118e-45!GO:0044267;cellular protein metabolic process;2.94527198626373e-45!GO:0044260;cellular macromolecule metabolic process;1.06513524952462e-44!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.21208174652845e-44!GO:0010467;gene expression;6.85885737884402e-43!GO:0033036;macromolecule localization;6.11394722191657e-42!GO:0016071;mRNA metabolic process;7.83137000321287e-41!GO:0015031;protein transport;2.22413643960355e-40!GO:0003735;structural constituent of ribosome;1.1540639235835e-39!GO:0005829;cytosol;2.8685300807862e-39!GO:0006259;DNA metabolic process;1.5593719512664e-38!GO:0031090;organelle membrane;1.61203423761538e-38!GO:0008104;protein localization;1.4424559489871e-37!GO:0008380;RNA splicing;2.44322906679937e-37!GO:0006996;organelle organization and biogenesis;4.8273002606666e-37!GO:0044249;cellular biosynthetic process;5.06373191102121e-37!GO:0045184;establishment of protein localization;6.63228287804259e-37!GO:0065003;macromolecular complex assembly;3.63278350234756e-36!GO:0009058;biosynthetic process;5.17075312484887e-36!GO:0044429;mitochondrial part;1.29818685294674e-35!GO:0006397;mRNA processing;1.41069324182965e-35!GO:0009059;macromolecule biosynthetic process;1.60350647229852e-35!GO:0033279;ribosomal subunit;2.52252635875998e-35!GO:0007049;cell cycle;2.97562731731111e-35!GO:0031967;organelle envelope;3.79999920234388e-35!GO:0031975;envelope;8.99383587093406e-35!GO:0046907;intracellular transport;2.93018458993815e-34!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.4530787267473e-32!GO:0022607;cellular component assembly;1.09151473398793e-31!GO:0005654;nucleoplasm;2.97182754634569e-31!GO:0006886;intracellular protein transport;6.66241511448319e-29!GO:0000166;nucleotide binding;4.71676967667588e-28!GO:0005681;spliceosome;1.49754497507226e-27!GO:0022402;cell cycle process;4.84158716884655e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.6714928667284e-26!GO:0044451;nucleoplasm part;1.04299448763497e-25!GO:0003676;nucleic acid binding;6.14694767732659e-24!GO:0005694;chromosome;3.18440329490526e-23!GO:0000278;mitotic cell cycle;7.13135167880988e-23!GO:0016462;pyrophosphatase activity;1.77835230889172e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.40955790974589e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;3.71799692063632e-22!GO:0051649;establishment of cellular localization;5.02348165311294e-22!GO:0051641;cellular localization;5.83179942591592e-22!GO:0017111;nucleoside-triphosphatase activity;6.75356138573272e-22!GO:0006974;response to DNA damage stimulus;8.3690933349326e-22!GO:0044445;cytosolic part;1.29425589181715e-21!GO:0005740;mitochondrial envelope;4.8387659560991e-21!GO:0016874;ligase activity;8.1806838025363e-21!GO:0019866;organelle inner membrane;1.43259301117432e-20!GO:0044427;chromosomal part;3.07874680717074e-20!GO:0032553;ribonucleotide binding;3.41092943824097e-20!GO:0032555;purine ribonucleotide binding;3.41092943824097e-20!GO:0031966;mitochondrial membrane;5.34219446777428e-20!GO:0016070;RNA metabolic process;1.28412618287318e-19!GO:0017076;purine nucleotide binding;1.29098195494179e-19!GO:0022618;protein-RNA complex assembly;1.94000864533444e-19!GO:0006119;oxidative phosphorylation;4.43382340088137e-19!GO:0008134;transcription factor binding;1.11937515739578e-18!GO:0005730;nucleolus;1.578926925306e-18!GO:0005743;mitochondrial inner membrane;2.05393800236582e-18!GO:0015935;small ribosomal subunit;3.7837523424837e-18!GO:0015934;large ribosomal subunit;5.25265021988618e-18!GO:0006512;ubiquitin cycle;6.05546257984245e-18!GO:0051276;chromosome organization and biogenesis;6.07867976826716e-18!GO:0000087;M phase of mitotic cell cycle;7.75087532351277e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;8.12754640391748e-18!GO:0044265;cellular macromolecule catabolic process;8.70092296081405e-18!GO:0022403;cell cycle phase;9.89529870747747e-18!GO:0006457;protein folding;1.01180186788627e-17!GO:0031980;mitochondrial lumen;1.0833294437603e-17!GO:0005759;mitochondrial matrix;1.0833294437603e-17!GO:0006281;DNA repair;1.23382713938922e-17!GO:0019941;modification-dependent protein catabolic process;1.39796943566335e-17!GO:0043632;modification-dependent macromolecule catabolic process;1.39796943566335e-17!GO:0007067;mitosis;1.46179685421378e-17!GO:0043285;biopolymer catabolic process;2.37283333542469e-17!GO:0006511;ubiquitin-dependent protein catabolic process;2.62919939696781e-17!GO:0005524;ATP binding;2.81842313772205e-17!GO:0044257;cellular protein catabolic process;3.03401390541737e-17!GO:0012505;endomembrane system;5.30329839404325e-17!GO:0032559;adenyl ribonucleotide binding;5.30329839404325e-17!GO:0044455;mitochondrial membrane part;6.7014637080043e-17!GO:0006605;protein targeting;2.28269747828056e-16!GO:0048770;pigment granule;2.61884415608841e-16!GO:0042470;melanosome;2.61884415608841e-16!GO:0030554;adenyl nucleotide binding;2.80607007220752e-16!GO:0051301;cell division;5.84002120553184e-16!GO:0012501;programmed cell death;9.72037858886643e-16!GO:0006260;DNA replication;1.00918343245965e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.5534367571468e-15!GO:0000279;M phase;1.58902102299469e-15!GO:0006915;apoptosis;1.81477213649191e-15!GO:0006366;transcription from RNA polymerase II promoter;2.01947187743882e-15!GO:0009719;response to endogenous stimulus;3.31658397253294e-15!GO:0009057;macromolecule catabolic process;3.7152484832543e-15!GO:0008135;translation factor activity, nucleic acid binding;3.73759677441347e-15!GO:0043412;biopolymer modification;4.3145831310454e-15!GO:0005635;nuclear envelope;1.15599661178817e-14!GO:0030163;protein catabolic process;1.16702992429157e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;2.37575074657827e-14!GO:0008219;cell death;2.75680618218053e-14!GO:0016265;death;2.75680618218053e-14!GO:0005783;endoplasmic reticulum;3.5191107113857e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;4.72409375922075e-14!GO:0000375;RNA splicing, via transesterification reactions;4.72409375922075e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.72409375922075e-14!GO:0042254;ribosome biogenesis and assembly;6.62545952805059e-14!GO:0006323;DNA packaging;1.04116094692084e-13!GO:0051726;regulation of cell cycle;1.07468257234636e-13!GO:0005761;mitochondrial ribosome;1.07468257234636e-13!GO:0000313;organellar ribosome;1.07468257234636e-13!GO:0000074;regulation of progression through cell cycle;1.19840073342069e-13!GO:0006913;nucleocytoplasmic transport;1.43868074859419e-13!GO:0044248;cellular catabolic process;1.66902994187647e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.93096351690971e-13!GO:0006464;protein modification process;3.14489178815961e-13!GO:0005746;mitochondrial respiratory chain;3.24796830261225e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.05375657036583e-13!GO:0051169;nuclear transport;5.2944432716644e-13!GO:0043687;post-translational protein modification;6.27439704491728e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.45963211212798e-13!GO:0016604;nuclear body;7.23548194257151e-13!GO:0031965;nuclear membrane;8.38154664025911e-13!GO:0044453;nuclear membrane part;1.18347414739762e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.19206006741027e-12!GO:0003954;NADH dehydrogenase activity;1.19206006741027e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.19206006741027e-12!GO:0051082;unfolded protein binding;1.30755276943256e-12!GO:0016887;ATPase activity;2.92510442441459e-12!GO:0000785;chromatin;3.45514763996478e-12!GO:0006413;translational initiation;5.11124160005928e-12!GO:0042623;ATPase activity, coupled;8.94144673305311e-12!GO:0048523;negative regulation of cellular process;1.02349274212245e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.02380672848751e-11!GO:0003743;translation initiation factor activity;1.19910729785624e-11!GO:0005794;Golgi apparatus;1.3276963220393e-11!GO:0003712;transcription cofactor activity;1.3333729480555e-11!GO:0048193;Golgi vesicle transport;1.40776805703821e-11!GO:0006446;regulation of translational initiation;2.24123094114948e-11!GO:0004386;helicase activity;2.57983083839696e-11!GO:0044432;endoplasmic reticulum part;3.70598123878386e-11!GO:0008639;small protein conjugating enzyme activity;4.29788503667769e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.31147141480879e-11!GO:0042775;organelle ATP synthesis coupled electron transport;5.37099537834153e-11!GO:0042773;ATP synthesis coupled electron transport;5.37099537834153e-11!GO:0050794;regulation of cellular process;5.62167290767615e-11!GO:0005643;nuclear pore;8.50537131589814e-11!GO:0004842;ubiquitin-protein ligase activity;1.00443902303866e-10!GO:0051186;cofactor metabolic process;1.02908932913396e-10!GO:0030964;NADH dehydrogenase complex (quinone);1.05557105887698e-10!GO:0045271;respiratory chain complex I;1.05557105887698e-10!GO:0005747;mitochondrial respiratory chain complex I;1.05557105887698e-10!GO:0019787;small conjugating protein ligase activity;1.30058689005651e-10!GO:0065004;protein-DNA complex assembly;1.32583912736911e-10!GO:0042981;regulation of apoptosis;1.5925637171387e-10!GO:0043067;regulation of programmed cell death;1.5925637171387e-10!GO:0050657;nucleic acid transport;1.779235608644e-10!GO:0051236;establishment of RNA localization;1.779235608644e-10!GO:0050658;RNA transport;1.779235608644e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.91385522624429e-10!GO:0006403;RNA localization;1.93228310941066e-10!GO:0006333;chromatin assembly or disassembly;2.30810046988925e-10!GO:0006461;protein complex assembly;2.35942277889249e-10!GO:0016607;nuclear speck;2.84427622509473e-10!GO:0006399;tRNA metabolic process;2.85224133893306e-10!GO:0048519;negative regulation of biological process;2.91518841275309e-10!GO:0017038;protein import;3.08146252329232e-10!GO:0016881;acid-amino acid ligase activity;5.70198907564096e-10!GO:0009055;electron carrier activity;5.84805119632203e-10!GO:0051246;regulation of protein metabolic process;9.13548483544373e-10!GO:0016192;vesicle-mediated transport;1.71186698285586e-09!GO:0015630;microtubule cytoskeleton;3.73537092487166e-09!GO:0006732;coenzyme metabolic process;4.04275008915177e-09!GO:0008026;ATP-dependent helicase activity;4.30192533869761e-09!GO:0006364;rRNA processing;5.33989225864105e-09!GO:0016072;rRNA metabolic process;7.25758427702854e-09!GO:0008565;protein transporter activity;7.591853142899e-09!GO:0031324;negative regulation of cellular metabolic process;1.08513326742002e-08!GO:0016568;chromatin modification;1.26556622452056e-08!GO:0005819;spindle;1.35820188954912e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.43886048919632e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.49375729877616e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.50369584559642e-08!GO:0046930;pore complex;1.66124084025505e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.66709272182497e-08!GO:0004812;aminoacyl-tRNA ligase activity;1.66709272182497e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.66709272182497e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.7423562769666e-08!GO:0051028;mRNA transport;2.05762467256676e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.31567776058979e-08!GO:0005667;transcription factor complex;2.46700337489668e-08!GO:0065002;intracellular protein transport across a membrane;2.55803314604905e-08!GO:0043038;amino acid activation;2.73796152592759e-08!GO:0006418;tRNA aminoacylation for protein translation;2.73796152592759e-08!GO:0043039;tRNA aminoacylation;2.73796152592759e-08!GO:0043566;structure-specific DNA binding;3.00982990135655e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.23091228920062e-08!GO:0005789;endoplasmic reticulum membrane;3.23091228920062e-08!GO:0032446;protein modification by small protein conjugation;3.39639690332038e-08!GO:0000775;chromosome, pericentric region;3.46065131312873e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.48882029517879e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.76004335640776e-08!GO:0051170;nuclear import;4.84503572149863e-08!GO:0016567;protein ubiquitination;5.48071863550698e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.59208320103661e-08!GO:0003924;GTPase activity;7.03090654111078e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.81772443225184e-08!GO:0006261;DNA-dependent DNA replication;9.10810099667405e-08!GO:0006163;purine nucleotide metabolic process;9.39651383516856e-08!GO:0048475;coated membrane;9.84553227474805e-08!GO:0030117;membrane coat;9.84553227474805e-08!GO:0009259;ribonucleotide metabolic process;1.01473625377415e-07!GO:0016779;nucleotidyltransferase activity;1.05228591872952e-07!GO:0009056;catabolic process;1.1087578082948e-07!GO:0048522;positive regulation of cellular process;1.14021305514597e-07!GO:0051188;cofactor biosynthetic process;1.37575011630041e-07!GO:0006164;purine nucleotide biosynthetic process;1.42439013259312e-07!GO:0006606;protein import into nucleus;1.47780825926263e-07!GO:0043069;negative regulation of programmed cell death;1.52944184208206e-07!GO:0030120;vesicle coat;1.57307695337132e-07!GO:0030662;coated vesicle membrane;1.57307695337132e-07!GO:0015986;ATP synthesis coupled proton transport;1.68705379616662e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.68705379616662e-07!GO:0016787;hydrolase activity;1.97209531723432e-07!GO:0016563;transcription activator activity;2.2473564500124e-07!GO:0007051;spindle organization and biogenesis;2.27326629337677e-07!GO:0009260;ribonucleotide biosynthetic process;2.6261323586614e-07!GO:0043066;negative regulation of apoptosis;3.58321796046807e-07!GO:0030532;small nuclear ribonucleoprotein complex;3.85869399752971e-07!GO:0009892;negative regulation of metabolic process;3.87354064045512e-07!GO:0007005;mitochondrion organization and biogenesis;3.93937256193374e-07!GO:0005813;centrosome;4.0904682121516e-07!GO:0005793;ER-Golgi intermediate compartment;4.38757568460016e-07!GO:0000245;spliceosome assembly;4.80569012068342e-07!GO:0006334;nucleosome assembly;5.49623306684813e-07!GO:0005839;proteasome core complex (sensu Eukaryota);6.47527468089482e-07!GO:0009150;purine ribonucleotide metabolic process;6.60848490147952e-07!GO:0031497;chromatin assembly;6.85929073618722e-07!GO:0050789;regulation of biological process;6.86639250254245e-07!GO:0006916;anti-apoptosis;8.05001164080848e-07!GO:0003697;single-stranded DNA binding;8.41256956576068e-07!GO:0005815;microtubule organizing center;8.44688236214384e-07!GO:0005768;endosome;9.52967420187815e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.03762887164819e-06!GO:0009060;aerobic respiration;1.06205962825454e-06!GO:0009108;coenzyme biosynthetic process;1.24830460397122e-06!GO:0003682;chromatin binding;1.65211744349964e-06!GO:0043623;cellular protein complex assembly;1.83439454039616e-06!GO:0019829;cation-transporting ATPase activity;1.95784666900361e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.99663966929604e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.03466043488657e-06!GO:0016481;negative regulation of transcription;2.16493509371099e-06!GO:0004298;threonine endopeptidase activity;2.3202257679221e-06!GO:0016564;transcription repressor activity;2.33033790077588e-06!GO:0006754;ATP biosynthetic process;2.43646438994911e-06!GO:0006753;nucleoside phosphate metabolic process;2.43646438994911e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.46492770036864e-06!GO:0006793;phosphorus metabolic process;2.98024447333775e-06!GO:0006796;phosphate metabolic process;2.98024447333775e-06!GO:0003713;transcription coactivator activity;3.2466646191646e-06!GO:0045786;negative regulation of progression through cell cycle;3.32142222346071e-06!GO:0009142;nucleoside triphosphate biosynthetic process;4.14010211645017e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.14010211645017e-06!GO:0009141;nucleoside triphosphate metabolic process;4.45447364935034e-06!GO:0042802;identical protein binding;4.48004939875508e-06!GO:0051427;hormone receptor binding;4.78966615518885e-06!GO:0045333;cellular respiration;4.78966615518885e-06!GO:0005525;GTP binding;4.8123545373382e-06!GO:0000151;ubiquitin ligase complex;5.07159094407988e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.43432666068193e-06!GO:0006099;tricarboxylic acid cycle;5.91262169078918e-06!GO:0046356;acetyl-CoA catabolic process;5.91262169078918e-06!GO:0046034;ATP metabolic process;6.46799024599939e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.54051861117432e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.54051861117432e-06!GO:0009199;ribonucleoside triphosphate metabolic process;6.58950265922661e-06!GO:0016740;transferase activity;6.76866921547725e-06!GO:0006950;response to stress;7.00805989581246e-06!GO:0006752;group transfer coenzyme metabolic process;7.48865010618052e-06!GO:0035257;nuclear hormone receptor binding;9.39974977569508e-06!GO:0045259;proton-transporting ATP synthase complex;9.40511577970451e-06!GO:0051329;interphase of mitotic cell cycle;1.01301248148091e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.02613695898586e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.02613695898586e-05!GO:0003724;RNA helicase activity;1.23713462079762e-05!GO:0005657;replication fork;1.40040121766821e-05!GO:0003899;DNA-directed RNA polymerase activity;1.41515956425646e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.49622826966557e-05!GO:0051168;nuclear export;1.70798945281404e-05!GO:0006084;acetyl-CoA metabolic process;1.8066759536378e-05!GO:0009109;coenzyme catabolic process;2.22463236226045e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.32838729710475e-05!GO:0006613;cotranslational protein targeting to membrane;2.35181680462207e-05!GO:0048471;perinuclear region of cytoplasm;2.36943302445647e-05!GO:0003690;double-stranded DNA binding;2.48456918127782e-05!GO:0019222;regulation of metabolic process;2.65479543195676e-05!GO:0016310;phosphorylation;2.89790697329015e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.14892434119145e-05!GO:0007243;protein kinase cascade;3.24630759125749e-05!GO:0051325;interphase;3.25429525256873e-05!GO:0051187;cofactor catabolic process;3.44814531264199e-05!GO:0045893;positive regulation of transcription, DNA-dependent;4.67032678011793e-05!GO:0045941;positive regulation of transcription;4.73065559377483e-05!GO:0048518;positive regulation of biological process;5.44134177895528e-05!GO:0005798;Golgi-associated vesicle;5.98014828625727e-05!GO:0006402;mRNA catabolic process;6.2253666780941e-05!GO:0008094;DNA-dependent ATPase activity;6.64247025916659e-05!GO:0031252;leading edge;7.24519211473841e-05!GO:0007264;small GTPase mediated signal transduction;7.24519211473841e-05!GO:0009117;nucleotide metabolic process;7.44759864706661e-05!GO:0009967;positive regulation of signal transduction;8.55099321170649e-05!GO:0032561;guanyl ribonucleotide binding;8.72459561760862e-05!GO:0019001;guanyl nucleotide binding;8.72459561760862e-05!GO:0051052;regulation of DNA metabolic process;9.1952392205285e-05!GO:0000075;cell cycle checkpoint;9.2643035382885e-05!GO:0003714;transcription corepressor activity;9.35314460777258e-05!GO:0005762;mitochondrial large ribosomal subunit;0.000105709939375936!GO:0000315;organellar large ribosomal subunit;0.000105709939375936!GO:0000786;nucleosome;0.000110191573683317!GO:0003729;mRNA binding;0.000119297241245777!GO:0007010;cytoskeleton organization and biogenesis;0.000120094613302787!GO:0044431;Golgi apparatus part;0.000139168739041839!GO:0007052;mitotic spindle organization and biogenesis;0.000139814440457162!GO:0000776;kinetochore;0.000145021968632283!GO:0044440;endosomal part;0.000150928904193749!GO:0010008;endosome membrane;0.000150928904193749!GO:0007059;chromosome segregation;0.00015598183817899!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000156531833455054!GO:0016363;nuclear matrix;0.000163284268556802!GO:0006302;double-strand break repair;0.000163784021261091!GO:0046983;protein dimerization activity;0.000174793788674107!GO:0045454;cell redox homeostasis;0.000177522510980558!GO:0000314;organellar small ribosomal subunit;0.000177522510980558!GO:0005763;mitochondrial small ribosomal subunit;0.000177522510980558!GO:0007088;regulation of mitosis;0.00017907485721464!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000186693125291302!GO:0003702;RNA polymerase II transcription factor activity;0.000189016300760945!GO:0006401;RNA catabolic process;0.000209566496401523!GO:0005856;cytoskeleton;0.000222644968284624!GO:0043021;ribonucleoprotein binding;0.000249308681231821!GO:0006352;transcription initiation;0.000259918605039576!GO:0006417;regulation of translation;0.000275038628091111!GO:0019899;enzyme binding;0.000282297921208234!GO:0005788;endoplasmic reticulum lumen;0.000285327051991371!GO:0008186;RNA-dependent ATPase activity;0.000345112337395031!GO:0006612;protein targeting to membrane;0.000349098192633469!GO:0016251;general RNA polymerase II transcription factor activity;0.000378693329060419!GO:0031988;membrane-bound vesicle;0.000389461428078!GO:0005770;late endosome;0.000392263856468253!GO:0065009;regulation of a molecular function;0.000411194095325531!GO:0016023;cytoplasmic membrane-bound vesicle;0.000518681032972455!GO:0005048;signal sequence binding;0.000565104187644342!GO:0030118;clathrin coat;0.000599263702657749!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000650216010692752!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000663534429036701!GO:0065007;biological regulation;0.000687649638634158!GO:0030867;rough endoplasmic reticulum membrane;0.00072013507948612!GO:0043065;positive regulation of apoptosis;0.00072809268997757!GO:0016491;oxidoreductase activity;0.00075019513490135!GO:0008654;phospholipid biosynthetic process;0.000767807606516601!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000912380496996468!GO:0016853;isomerase activity;0.00091684975539229!GO:0051098;regulation of binding;0.000920784399642894!GO:0048468;cell development;0.000920784399642894!GO:0043068;positive regulation of programmed cell death;0.000934666801439068!GO:0004004;ATP-dependent RNA helicase activity;0.000956452645482411!GO:0005791;rough endoplasmic reticulum;0.000963631929955372!GO:0031326;regulation of cellular biosynthetic process;0.000975736617004597!GO:0045892;negative regulation of transcription, DNA-dependent;0.000979029964192496!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00103627782362532!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00108469234893006!GO:0051789;response to protein stimulus;0.00109888630530061!GO:0006986;response to unfolded protein;0.00109888630530061!GO:0030132;clathrin coat of coated pit;0.0011355355606731!GO:0003684;damaged DNA binding;0.00123221619393008!GO:0051252;regulation of RNA metabolic process;0.00125009467095972!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00125009467095972!GO:0009112;nucleobase metabolic process;0.00139183057186138!GO:0008632;apoptotic program;0.00141480177525463!GO:0000139;Golgi membrane;0.00146290804446824!GO:0031323;regulation of cellular metabolic process;0.00152440879329976!GO:0051920;peroxiredoxin activity;0.00155117924027239!GO:0008033;tRNA processing;0.00156693942402682!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00160164275609324!GO:0044452;nucleolar part;0.00160289456452044!GO:0032508;DNA duplex unwinding;0.00161561787425595!GO:0032392;DNA geometric change;0.00161561787425595!GO:0046822;regulation of nucleocytoplasmic transport;0.00171742667596527!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00176850662610066!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00176850662610066!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00176850662610066!GO:0019843;rRNA binding;0.00186657486036106!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00186657486036106!GO:0006405;RNA export from nucleus;0.00190798600348988!GO:0016859;cis-trans isomerase activity;0.00196759530069078!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00197645371857151!GO:0033116;ER-Golgi intermediate compartment membrane;0.00204998391750635!GO:0005684;U2-dependent spliceosome;0.00211562409286452!GO:0005773;vacuole;0.0021502785380148!GO:0003678;DNA helicase activity;0.00215431435337434!GO:0001726;ruffle;0.00217818152718351!GO:0030036;actin cytoskeleton organization and biogenesis;0.00224990408396089!GO:0030133;transport vesicle;0.00230910107143416!GO:0051101;regulation of DNA binding;0.00230910107143416!GO:0046483;heterocycle metabolic process;0.00233817182617615!GO:0005874;microtubule;0.00235684121886238!GO:0006275;regulation of DNA replication;0.00241759519665558!GO:0030658;transport vesicle membrane;0.00242359768661549!GO:0004674;protein serine/threonine kinase activity;0.00242359768661549!GO:0009889;regulation of biosynthetic process;0.00243668358100955!GO:0007017;microtubule-based process;0.00253541447207855!GO:0006268;DNA unwinding during replication;0.00259525377683982!GO:0003711;transcription elongation regulator activity;0.00265974380129522!GO:0005637;nuclear inner membrane;0.00267752387047411!GO:0031982;vesicle;0.00269371048020112!GO:0006310;DNA recombination;0.00270149947994431!GO:0006414;translational elongation;0.00275005367030121!GO:0030119;AP-type membrane coat adaptor complex;0.00275163528140182!GO:0006839;mitochondrial transport;0.00279795600186463!GO:0005885;Arp2/3 protein complex;0.00279795600186463!GO:0006891;intra-Golgi vesicle-mediated transport;0.00302055924861299!GO:0016197;endosome transport;0.00302228312115545!GO:0030031;cell projection biogenesis;0.00306189180310378!GO:0048500;signal recognition particle;0.00306518692591538!GO:0035258;steroid hormone receptor binding;0.00307423237784032!GO:0043488;regulation of mRNA stability;0.00313760149793576!GO:0043487;regulation of RNA stability;0.00313760149793576!GO:0043681;protein import into mitochondrion;0.00316385049481461!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00316526792566077!GO:0030663;COPI coated vesicle membrane;0.0031705774992124!GO:0030126;COPI vesicle coat;0.0031705774992124!GO:0003746;translation elongation factor activity;0.0032421962059412!GO:0043624;cellular protein complex disassembly;0.00332792097571508!GO:0008250;oligosaccharyl transferase complex;0.00334230298662664!GO:0030880;RNA polymerase complex;0.00336403531276213!GO:0008022;protein C-terminus binding;0.00341889840558004!GO:0006383;transcription from RNA polymerase III promoter;0.00346398117672368!GO:0051087;chaperone binding;0.003471943084996!GO:0030131;clathrin adaptor complex;0.00364199449584344!GO:0008361;regulation of cell size;0.00371539985782595!GO:0030521;androgen receptor signaling pathway;0.00378286115654495!GO:0005905;coated pit;0.00402628594723045!GO:0000049;tRNA binding;0.00423441525585176!GO:0032984;macromolecular complex disassembly;0.00424668919263624!GO:0005876;spindle microtubule;0.0043850362891935!GO:0008139;nuclear localization sequence binding;0.00455073070279482!GO:0009116;nucleoside metabolic process;0.00459746738091116!GO:0006611;protein export from nucleus;0.00471840886318303!GO:0031410;cytoplasmic vesicle;0.00483304615578521!GO:0006626;protein targeting to mitochondrion;0.00500145361556996!GO:0042770;DNA damage response, signal transduction;0.00500262276926797!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00502872834802806!GO:0001889;liver development;0.00520612676639992!GO:0000323;lytic vacuole;0.00523213547499122!GO:0005764;lysosome;0.00523213547499122!GO:0016049;cell growth;0.00523213547499122!GO:0000059;protein import into nucleus, docking;0.00527479687525568!GO:0005769;early endosome;0.00539234747975701!GO:0000922;spindle pole;0.00541711154152385!GO:0008312;7S RNA binding;0.00562700783214665!GO:0008283;cell proliferation;0.00563422487249116!GO:0043241;protein complex disassembly;0.00578955150429386!GO:0006270;DNA replication initiation;0.00587692601365583!GO:0001558;regulation of cell growth;0.0058979649543718!GO:0000228;nuclear chromosome;0.006067477156685!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00617988690276648!GO:0006350;transcription;0.00618412943113374!GO:0000082;G1/S transition of mitotic cell cycle;0.00625485252622633!GO:0000792;heterochromatin;0.00632331172281996!GO:0007093;mitotic cell cycle checkpoint;0.00636681980350815!GO:0046966;thyroid hormone receptor binding;0.00661512690473277!GO:0032507;maintenance of cellular protein localization;0.00671615169747203!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00695955408770382!GO:0000428;DNA-directed RNA polymerase complex;0.00695955408770382!GO:0006338;chromatin remodeling;0.00706573349223857!GO:0030660;Golgi-associated vesicle membrane;0.00709968293049162!GO:0015631;tubulin binding;0.00710735640540156!GO:0015980;energy derivation by oxidation of organic compounds;0.00710923052194965!GO:0006607;NLS-bearing substrate import into nucleus;0.00721035639300327!GO:0009893;positive regulation of metabolic process;0.00721035639300327!GO:0031968;organelle outer membrane;0.00728537666168523!GO:0030137;COPI-coated vesicle;0.00762205009322716!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00777093378154122!GO:0031072;heat shock protein binding;0.00777093378154122!GO:0004527;exonuclease activity;0.0080701814704176!GO:0030029;actin filament-based process;0.00829236886117329!GO:0050662;coenzyme binding;0.00843588489476829!GO:0006979;response to oxidative stress;0.00845242400171588!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00845242400171588!GO:0045047;protein targeting to ER;0.00845242400171588!GO:0019867;outer membrane;0.00852252861374818!GO:0007006;mitochondrial membrane organization and biogenesis;0.00864061439745443!GO:0006091;generation of precursor metabolites and energy;0.00870707655527398!GO:0005669;transcription factor TFIID complex;0.00888679131309349!GO:0030134;ER to Golgi transport vesicle;0.00909780420838593!GO:0006144;purine base metabolic process;0.00913823530620051!GO:0030125;clathrin vesicle coat;0.00961123328948149!GO:0030665;clathrin coated vesicle membrane;0.00961123328948149!GO:0008601;protein phosphatase type 2A regulator activity;0.00964246920469809!GO:0031124;mRNA 3'-end processing;0.00964746460502856!GO:0006284;base-excision repair;0.00994491074609716!GO:0004576;oligosaccharyl transferase activity;0.00994491074609716!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0100891846706624!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0100891846706624!GO:0016044;membrane organization and biogenesis;0.0102870015388984!GO:0008234;cysteine-type peptidase activity;0.0103435980652158!GO:0009165;nucleotide biosynthetic process;0.0104071284415878!GO:0046489;phosphoinositide biosynthetic process;0.0104972367191653!GO:0008637;apoptotic mitochondrial changes;0.0105193356985557!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0105213068218522!GO:0015399;primary active transmembrane transporter activity;0.0105213068218522!GO:0043022;ribosome binding;0.0105695955567953!GO:0046982;protein heterodimerization activity;0.01087515489771!GO:0005741;mitochondrial outer membrane;0.0109146575924274!GO:0048037;cofactor binding;0.0109951181968173!GO:0000159;protein phosphatase type 2A complex;0.0110645273919012!GO:0006376;mRNA splice site selection;0.0112394655732776!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0112394655732776!GO:0031625;ubiquitin protein ligase binding;0.0112394655732776!GO:0018196;peptidyl-asparagine modification;0.0112394655732776!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0112394655732776!GO:0030127;COPII vesicle coat;0.0117247312575483!GO:0012507;ER to Golgi transport vesicle membrane;0.0117247312575483!GO:0016584;nucleosome positioning;0.0118633492135617!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.011949977649169!GO:0007346;regulation of progression through mitotic cell cycle;0.012121094007777!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0121947873522346!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0121947873522346!GO:0016272;prefoldin complex;0.0122729343671973!GO:0032200;telomere organization and biogenesis;0.012442715200356!GO:0000723;telomere maintenance;0.012442715200356!GO:0031325;positive regulation of cellular metabolic process;0.0125222247775526!GO:0008629;induction of apoptosis by intracellular signals;0.0125934096874741!GO:0031529;ruffle organization and biogenesis;0.0130670450001035!GO:0048487;beta-tubulin binding;0.0131131431601322!GO:0006520;amino acid metabolic process;0.0132969223991456!GO:0050790;regulation of catalytic activity;0.0133740725387873!GO:0016791;phosphoric monoester hydrolase activity;0.0138746122596465!GO:0050681;androgen receptor binding;0.0144669792300424!GO:0030518;steroid hormone receptor signaling pathway;0.0147648695352484!GO:0051651;maintenance of cellular localization;0.01484654650242!GO:0030027;lamellipodium;0.0148678889523716!GO:0006289;nucleotide-excision repair;0.0151299333506748!GO:0043596;nuclear replication fork;0.015555383991746!GO:0017166;vinculin binding;0.0155952889168653!GO:0010468;regulation of gene expression;0.0155952889168653!GO:0030176;integral to endoplasmic reticulum membrane;0.0160415989494992!GO:0006213;pyrimidine nucleoside metabolic process;0.0162461896851376!GO:0008092;cytoskeletal protein binding;0.0162562311385251!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.016651530719972!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0169115110354441!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0169396291463072!GO:0006354;RNA elongation;0.0169566622196392!GO:0005862;muscle thin filament tropomyosin;0.0176091958723447!GO:0042393;histone binding;0.0176091958723447!GO:0043414;biopolymer methylation;0.0185548549420793!GO:0051540;metal cluster binding;0.0189660909704932!GO:0051536;iron-sulfur cluster binding;0.0189660909704932!GO:0005832;chaperonin-containing T-complex;0.0189741649034068!GO:0006595;polyamine metabolic process;0.0192486439824824!GO:0006818;hydrogen transport;0.0193122648589976!GO:0015992;proton transport;0.0195930474341264!GO:0000096;sulfur amino acid metabolic process;0.0198088966147915!GO:0004518;nuclease activity;0.0198469065193167!GO:0022411;cellular component disassembly;0.0199128274931885!GO:0008168;methyltransferase activity;0.0201610314044301!GO:0000339;RNA cap binding;0.0203390150408876!GO:0045334;clathrin-coated endocytic vesicle;0.0204855768583385!GO:0019752;carboxylic acid metabolic process;0.0204977572123834!GO:0051287;NAD binding;0.0205448553805522!GO:0046467;membrane lipid biosynthetic process;0.0213126091578192!GO:0006509;membrane protein ectodomain proteolysis;0.0213729438946579!GO:0033619;membrane protein proteolysis;0.0213729438946579!GO:0007021;tubulin folding;0.0214048695309464!GO:0007242;intracellular signaling cascade;0.021681907014767!GO:0046474;glycerophospholipid biosynthetic process;0.0217567263567151!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0219579060291905!GO:0016741;transferase activity, transferring one-carbon groups;0.0219892470736083!GO:0006360;transcription from RNA polymerase I promoter;0.0222516954714319!GO:0006082;organic acid metabolic process;0.0227772560251333!GO:0048146;positive regulation of fibroblast proliferation;0.0227772560251333!GO:0022415;viral reproductive process;0.0235493208717084!GO:0000209;protein polyubiquitination;0.0235493208717084!GO:0006892;post-Golgi vesicle-mediated transport;0.0235968794516311!GO:0007050;cell cycle arrest;0.024196498652808!GO:0051223;regulation of protein transport;0.0242982945496395!GO:0009119;ribonucleoside metabolic process;0.0251484510454109!GO:0006984;ER-nuclear signaling pathway;0.0251605165107219!GO:0005149;interleukin-1 receptor binding;0.0251605165107219!GO:0003756;protein disulfide isomerase activity;0.0254000076912217!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0254000076912217!GO:0043189;H4/H2A histone acetyltransferase complex;0.0257681969054287!GO:0008538;proteasome activator activity;0.0259537633556177!GO:0009303;rRNA transcription;0.0260705579689741!GO:0001836;release of cytochrome c from mitochondria;0.026215823303479!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0264607718127542!GO:0015002;heme-copper terminal oxidase activity;0.0264607718127542!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0264607718127542!GO:0004129;cytochrome-c oxidase activity;0.0264607718127542!GO:0047485;protein N-terminus binding;0.0266074535773143!GO:0042026;protein refolding;0.0269342244234746!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0273148109111355!GO:0043601;nuclear replisome;0.0276707195359775!GO:0030894;replisome;0.0276707195359775!GO:0000123;histone acetyltransferase complex;0.0293131238350075!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.030133604785404!GO:0008652;amino acid biosynthetic process;0.0304284582570142!GO:0048144;fibroblast proliferation;0.0304284582570142!GO:0048145;regulation of fibroblast proliferation;0.0304284582570142!GO:0006917;induction of apoptosis;0.0304628192453675!GO:0016311;dephosphorylation;0.0305776442659524!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0309273968556479!GO:0043492;ATPase activity, coupled to movement of substances;0.0319498570881585!GO:0007265;Ras protein signal transduction;0.0326402258295905!GO:0006378;mRNA polyadenylation;0.0329849732342065!GO:0000819;sister chromatid segregation;0.0332601708188058!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0334856897372572!GO:0032259;methylation;0.0337635883733423!GO:0008097;5S rRNA binding;0.033962708446863!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0342290399591588!GO:0000790;nuclear chromatin;0.0342883289856257!GO:0000781;chromosome, telomeric region;0.0346955629104809!GO:0030032;lamellipodium biogenesis;0.0346955629104809!GO:0045792;negative regulation of cell size;0.0349828079267338!GO:0035267;NuA4 histone acetyltransferase complex;0.0353483492057471!GO:0030128;clathrin coat of endocytic vesicle;0.0355135999776816!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0355135999776816!GO:0030122;AP-2 adaptor complex;0.0355135999776816!GO:0030100;regulation of endocytosis;0.0355135999776816!GO:0030384;phosphoinositide metabolic process;0.0357207867655776!GO:0008426;protein kinase C inhibitor activity;0.0358866717191612!GO:0022890;inorganic cation transmembrane transporter activity;0.0359907920193305!GO:0000725;recombinational repair;0.0362062611632789!GO:0000724;double-strand break repair via homologous recombination;0.0362062611632789!GO:0031123;RNA 3'-end processing;0.0365533758324338!GO:0008047;enzyme activator activity;0.0369859160139204!GO:0000070;mitotic sister chromatid segregation;0.0385958122324452!GO:0051235;maintenance of localization;0.0386101121872596!GO:0006650;glycerophospholipid metabolic process;0.0386181114612191!GO:0012502;induction of programmed cell death;0.0386205766021071!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0388582665065243!GO:0000178;exosome (RNase complex);0.0389307429776573!GO:0006730;one-carbon compound metabolic process;0.0392985476005021!GO:0004710;MAP/ERK kinase kinase activity;0.0401080551611125!GO:0008243;plasminogen activator activity;0.041226311765385!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0412591442254099!GO:0016126;sterol biosynthetic process;0.0414598587968269!GO:0040008;regulation of growth;0.0416007894566275!GO:0000152;nuclear ubiquitin ligase complex;0.0416007894566275!GO:0008287;protein serine/threonine phosphatase complex;0.041684498632849!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.041684498632849!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0419420067615079!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0419420067615079!GO:0051338;regulation of transferase activity;0.04228895732654!GO:0045947;negative regulation of translational initiation;0.04228895732654!GO:0009081;branched chain family amino acid metabolic process;0.0426554979893915!GO:0051053;negative regulation of DNA metabolic process;0.0427965029933918!GO:0004003;ATP-dependent DNA helicase activity;0.0430729396873944!GO:0030308;negative regulation of cell growth;0.0430729396873944!GO:0044450;microtubule organizing center part;0.0433694601999194!GO:0006564;L-serine biosynthetic process;0.0434514214252553!GO:0051539;4 iron, 4 sulfur cluster binding;0.0446462099277674!GO:0019783;small conjugating protein-specific protease activity;0.0451280581525386!GO:0035035;histone acetyltransferase binding;0.0452771579228053!GO:0006506;GPI anchor biosynthetic process;0.0453180681166658!GO:0004239;methionyl aminopeptidase activity;0.0454505005159534!GO:0033157;regulation of intracellular protein transport;0.0456866019665814!GO:0042306;regulation of protein import into nucleus;0.0456866019665814!GO:0008536;Ran GTPase binding;0.0458848519508602!GO:0008180;signalosome;0.0463293436396227!GO:0031371;ubiquitin conjugating enzyme complex;0.0466923402006565!GO:0004680;casein kinase activity;0.0467781911322582!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0473458795205896!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0475425042728752!GO:0000118;histone deacetylase complex;0.0476098208149778!GO:0005784;translocon complex;0.0476702809009355!GO:0008610;lipid biosynthetic process;0.0477775302771483!GO:0007004;telomere maintenance via telomerase;0.0482079559692204!GO:0006672;ceramide metabolic process;0.04860721242214!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0487031143933964!GO:0046112;nucleobase biosynthetic process;0.0487752330720054!GO:0043154;negative regulation of caspase activity;0.0488474664071101!GO:0030659;cytoplasmic vesicle membrane;0.0493880021359218!GO:0051128;regulation of cellular component organization and biogenesis;0.0495087798582193!GO:0030522;intracellular receptor-mediated signaling pathway;0.0496712308284018
 |sample_id=10426
 |sample_note=machine failed, remainder reloaded, low amount
@@ Line 76: / Line 99: @@
 |sample_tissue=vulva
 |top_motifs=SNAI1..3:1.85527433538;ZEB1:1.74254348003;TBX4,5:1.69212043202;VSX1,2:1.5418234101;TFDP1:1.41410643605;TP53:1.39041472974;ZNF148:1.36352010666;NKX2-3_NKX2-5:1.28396798883;RBPJ:1.2670376809;SP1:1.1638753479;PITX1..3:1.15220608505;IRF7:1.14037271817;NKX2-1,4:1.1130303964;E2F1..5:1.08138405598;POU2F1..3:0.989697279776;ADNP_IRX_SIX_ZHX:0.96694214988;GLI1..3:0.925620185079;FOXN1:0.841328594167;XCPE1{core}:0.838050289909;MYOD1:0.825258239863;POU1F1:0.813692444508;FOS_FOS{B,L1}_JUN{B,D}:0.741329530698;CEBPA,B_DDIT3:0.692430441168;TFCP2:0.672781868457;TBP:0.646273104715;NFY{A,B,C}:0.634867332438;FOXQ1:0.622121387118;FOX{I1,J2}:0.620629622563;ONECUT1,2:0.559410496516;TEAD1:0.555484285;NFE2:0.543305103323;NFIL3:0.520030230519;HSF1,2:0.51317997753;FOX{F1,F2,J1}:0.506985184652;TFAP2{A,C}:0.481351798695;BACH2:0.462411802165;POU5F1:0.408607145104;OCT4_SOX2{dimer}:0.408260491508;IKZF1:0.402554221137;ELK1,4_GABP{A,B1}:0.385708531684;FOSL2:0.371758984305;FOXA2:0.367838335865;FOXP1:0.36403996072;bHLH_family:0.349526736904;PPARG:0.348349944277;HOX{A5,B5}:0.326706261257;POU6F1:0.312854430885;MAZ:0.307960106543;STAT5{A,B}:0.304844055773;CDC5L:0.303200783591;ZNF143:0.302860721686;HOX{A6,A7,B6,B7}:0.289507312226;SOX17:0.279206584993;TLX2:0.273703583852;NANOG:0.253611550229;PAX8:0.24337422701;FOXL1:0.239981666081;NR6A1:0.229662716543;MED-1{core}:0.227060301415;ATF5_CREB3:0.216440026952;MYB:0.209823578848;HAND1,2:0.189344173148;HIF1A:0.183457901705;ARID5B:0.183073287362;NKX6-1,2:0.149576064738;NR5A1,2:0.145667247169;ZNF423:0.115012945136;EN1,2:0.108168428602;PAX2:0.090743608584;PAX1,9:0.0866342594881;IRF1,2:0.0676918144675;NFKB1_REL_RELA:0.0613917332169;CRX:0.0550505698076;RFX2..5_RFXANK_RFXAP:0.0505375898033;FOX{D1,D2}:0.0478534660634;PDX1:0.0417954239831;HLF:0.0292829530956;NRF1:0.0276566272016;RFX1:0.0271254203194;TLX1..3_NFIC{dimer}:0.017906806445;YY1:0.00136843578372;PBX1:-0.00762038446172;T:-0.0157101894292;GFI1B:-0.0285011409774;TFAP2B:-0.0307600387294;ELF1,2,4:-0.0365622721678;POU3F1..4:-0.0379332688208;GFI1:-0.0607230102808;HOXA9_MEIS1:-0.0623559886993;HNF4A_NR2F1,2:-0.0808005015115;MTF1:-0.0984532183735;BREu{core}:-0.100061169763;HOX{A4,D4}:-0.100865118726;PAX4:-0.108868024801;SRF:-0.109141259238;MTE{core}:-0.110265546741;AR:-0.114424230856;PAX3,7:-0.119452343605;FOXM1:-0.128664934396;SOX2:-0.138112722046;RREB1:-0.138585060395;EGR1..3:-0.139337150356;ATF4:-0.140156800345;SOX{8,9,10}:-0.14449362172;TOPORS:-0.150154091417;ATF2:-0.153724647156;NFIX:-0.161397776167;FOXO1,3,4:-0.191390515142;STAT2,4,6:-0.193404862021;LMO2:-0.21350502922;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.215557366323;GATA6:-0.226682495152;HNF1A:-0.2392222906;HBP1_HMGB_SSRP1_UBTF:-0.241138807469;EBF1:-0.254857067544;ZBTB6:-0.262422975517;TEF:-0.271016477073;JUN:-0.274354994513;MEF2{A,B,C,D}:-0.275807693751;NKX2-2,8:-0.276826662245;LEF1_TCF7_TCF7L1,2:-0.280900274867;GTF2A1,2:-0.289605925114;GTF2I:-0.294157280165;BPTF:-0.295196622101;ZNF384:-0.297425182796;PAX6:-0.324415415162;NFE2L2:-0.334119887165;NKX3-2:-0.357580610505;ZFP161:-0.35795699032;ALX4:-0.364503597545;AHR_ARNT_ARNT2:-0.368520519573;DBP:-0.369400791635;SPIB:-0.37431783061;HIC1:-0.374449967135;CUX2:-0.432760023942;MYBL2:-0.445342262707;SPI1:-0.448040892295;EP300:-0.448928062556;KLF4:-0.456541529892;DMAP1_NCOR{1,2}_SMARC:-0.458271256712;FOXD3:-0.459961113575;CREB1:-0.462613973419;HES1:-0.4682983199;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.473172552406;ETS1,2:-0.491229310075;GZF1:-0.494078909084;ZIC1..3:-0.524600700457;LHX3,4:-0.547695142977;PRRX1,2:-0.554980923643;SOX5:-0.566761222987;MAFB:-0.576802939544;ESRRA:-0.592241778141;CDX1,2,4:-0.6015929;RUNX1..3:-0.618129575305;SMAD1..7,9:-0.642385473127;NKX3-1:-0.659649164236;ZBTB16:-0.660166917021;PRDM1:-0.672699679838;UFEwm:-0.684483465822;NR3C1:-0.706399759054;AIRE:-0.75466182762;NHLH1,2:-0.76947065259;PATZ1:-0.775304339014;FOXP3:-0.787788669285;ZNF238:-0.788479193163;GATA4:-0.789945032388;HMGA1,2:-0.816425237179;RORA:-0.841485739428;REST:-0.841966461012;TAL1_TCF{3,4,12}:-0.863495269237;EVI1:-0.867170482893;SREBF1,2:-0.874704652322;GCM1,2:-0.892939481628;MZF1:-0.893821162241;MYFfamily:-0.903218034422;NR1H4:-0.926552165473;ESR1:-0.94294693694;PAX5:-0.945944937453;TGIF1:-0.956779472654;XBP1:-0.982738338379;ATF6:-0.989980919965;IKZF2:-1.01766893072;NFATC1..3:-1.05009605359;SPZ1:-1.10747780386;TFAP4:-1.11485045485;ALX1:-1.1389617956;RXR{A,B,G}:-1.22198802286;RXRA_VDR{dimer}:-1.26263588443;STAT1,3:-1.30576657873;NANOG{mouse}:-1.35913719189;NFE2L1:-1.38922448718;HMX1:-1.71332960494
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10426-106D3;search_select_hide=table117:FF:10426-106D3
 }}

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FF:10426-106D3: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 14:01, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0