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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005280
|accession_numbers=CAGE;DRX007876;DRR008748;DRZ000173;DRZ001558;DRZ011523;DRZ012908
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000995,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000995,UBERON:0002384,UBERON:0003134,UBERON:0000479,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0000066,CL:0002371,CL:0000499,CL:0000255,CL:0002076,CL:0002149,CL:0002255
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0000066,CL:0002371,CL:0000499,CL:0000255,CL:0002076,CL:0002149,CL:0002255
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|created_by=
|created_by=
|creation_date=
|creation_date=
|datafreeze_phase=1
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr12:66218255..66218304,+!p3@HMGA2!2.18!389.35!HMGA2;;chr2:114036488..114036504,-!p1@PAX8!1.99!96.77!PAX8;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.82!65.18!POU3F3;;chr17:46675558..46675577,-!p2@HOXB6!1.80!62.33!HOXB6;;chr17:48072574..48072597,-!p1@DLX3!1.76!56.35!DLX3;;chr1:201979743..201979762,+!p1@ELF3!1.74!54.36!ELF3;;chr6:10415484..10415508,-!p3@TFAP2A!1.72!51.23!TFAP2A;;chr11:34642612..34642646,+!p1@EHF!1.68!46.68!EHF;;chr7:27192185..27192209,-!p1@HOXA3!1.64!42.41!HOXA3;;chr7:27205136..27205164,-!p1@HOXA9!1.62!40.98!HOXA9;;chr12:66218212..66218244,+!p5@HMGA2!1.60!55.50!HMGA2;;chr7:27205106..27205134,-!p2@HOXA9!1.60!38.99!HOXA9;;chr17:46622205..46622218,-!p3@HOXB2!1.58!42.12!HOXB2;;chr17:36105042..36105060,-!p1@HNF1B!1.57!36.15!HNF1B;;chr12:66218378..66218401,+!p6@HMGA2!1.56!53.51!HMGA2;;chr12:26277956..26277980,-!p1@BHLHE41!1.55!118.97!BHLHE41;;chr12:26277817..26277863,-!p2@BHLHE41!1.55!45.82!BHLHE41;;chr6:126240442..126240459,+!p4@NCOA7!1.55!43.26!NCOA7;;chr7:27153454..27153469,-!p2@HOXA3!1.54!33.87!HOXA3;;chr12:66218183..66218209,+!p4@HMGA2!1.51!58.91!HMGA2;;chr17:46703687..46703740,-!p1@HOXB9!1.45!27.32!HOXB9;;chr12:66218836..66218888,+!p1@HMGA2!1.44!237.36!HMGA2;;chr12:66218443..66218461,+!p8@HMGA2!1.41!31.31!HMGA2;;chr6:10415276..10415341,-!p2@TFAP2A!1.37!27.61!TFAP2A;;chr7:27196217..27196246,-!p2@HOXA7!1.37!22.48!HOXA7;;chr3:12330560..12330579,+!p1@PPARG!1.36!25.05!PPARG;;chr1:201979703..201979721,+!p2@ELF3!1.35!21.35!ELF3;;chr17:46667594..46667619,-!p1@HOXB3!1.34!21.06!HOXB3;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.34!20.78!ZBED1;;chr6:126240380..126240430,+!p2@NCOA7!1.33!51.51!NCOA7;;chr6:10412600..10412637,-!p1@TFAP2A!1.33!33.58!TFAP2A;;chr12:26278008..26278024,-!p4@BHLHE41!1.33!24.48!BHLHE41;;chr7:63505799..63505904,+!p1@ZNF727!1.33!20.49!ZNF727;;chr12:27485785..27485816,+!p1@ARNTL2!1.31!130.64!ARNTL2;;chr18:55102628..55102646,+!p2@ONECUT2!1.31!19.64!ONECUT2;;chr12:66218420..66218439,+!p12@HMGA2!1.31!19.35!HMGA2;;chr9:100615499..100615519,+!p1@FOXE1!1.31!19.35!FOXE1;;chr12:66218598..66218645,+!p2@HMGA2!1.28!82.54!HMGA2;;chr12:26278030..26278039,-!p7@BHLHE41!1.26!17.08!BHLHE41;;chr6:19837592..19837621,+!p1@ID4!1.24!99.33!ID4;;chr2:46524897..46524911,+!p2@EPAS1!1.24!44.97!EPAS1;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.21!15.37!POU3F3;;chr14:29234581..29234601,+!p2@FOXG1!1.21!15.37!FOXG1;;chr7:113726357..113726443,+!p1@FOXP2!1.19!25.05!FOXP2;;chr7:28610099..28610113,+!p5@CREB5!1.18!14.23!CREB5;;chr18:55102598..55102623,+!p1@ONECUT2!1.18!14.23!ONECUT2;;chr13:100634031..100634045,+!p1@ZIC2!1.17!13.66!ZIC2;;chr7:26191809..26191890,+!p1@NFE2L3!1.16!66.03!NFE2L3;;chr8:77593474..77593612,+!p1@ZFHX4!1.16!57.21!ZFHX4;;chr12:27485762..27485776,+!p3@ARNTL2!1.16!36.15!ARNTL2;;chr17:46688334..46688385,-!p1@HOXB7!1.16!19.35!HOXB7;;chr19:53496768..53496799,-!p1@ZNF702P!1.15!20.49!ZNF702P;;chr7:57509877..57509895,+!p1@ZNF716!1.15!13.09!ZNF716;;chr12:26277929..26277955,-!p3@BHLHE41!1.13!17.93!BHLHE41;;chr6:126240463..126240489,+!p6@NCOA7!1.13!13.95!NCOA7;;chr3:141747459..141747475,-!p1@TFDP2!1.11!99.61!TFDP2;;chr12:66357214..66357233,+!p13@HMGA2!1.11!11.95!HMGA2;;chr17:46675619..46675642,-!p5@HOXB6!1.11!11.95!HOXB6;;chr17:41622765..41622821,-!p2@ETV4!1.10!17.65!ETV4;;chr17:46622229..46622257,-!p6@HOXB2!1.10!13.66!HOXB2;;chr3:169381420..169381535,-!p1@MECOM!1.09!13.38!MECOM;;chr17:46622440..46622477,-!p5@HOXB2!1.09!12.81!HOXB2;;chr8:102504651..102504683,+!p1@GRHL2!1.09!11.38!GRHL2;;chr5:137804405..137804444,+!p3@EGR1!1.08!13.38!EGR1;;chr8:55370487..55370503,+!p1@SOX17!1.08!11.10!SOX17;;chr12:66218003..66218018,+!p9@HMGA2!1.07!13.09!HMGA2;;chr6:28321909..28321965,-!p3@ZNF323!1.07!10.82!ZNF323;;chr19:53758058..53758088,-!p2@ZNF677!1.05!33.87!ZNF677;;chr13:100623375..100623425,-!p1@ZIC5!1.05!10.25!ZIC5;;chr2:200322654..200322707,-!p2@SATB2!1.04!14.52!SATB2;;chr4:149363475..149363492,-!p2@NR3C2!1.04!9.96!NR3C2;;chr12:66218152..66218174,+!p10@HMGA2!1.03!10.53!HMGA2;;chr14:29235961..29236008,+!p1@FOXG1!1.03!9.68!FOXG1;;chr3:69915385..69915438,+!p3@MITF!1.03!9.68!MITF;;chr4:149363494..149363543,-!p1@NR3C2!1.03!9.68!NR3C2;;chr17:46671108..46671147,-!p1@HOXB5!1.03!9.68!HOXB5;;chr16:51185172..51185197,-!p1@SALL1!1.02!9.39!SALL1;;chr17:41622731..41622764,-!p5@ETV4!1.02!9.39!ETV4;;chr6:10419768..10419819,-!p6@TFAP2A!1.02!9.39!TFAP2A;;chr12:27485823..27485868,+!p2@ARNTL2!1.01!37.85!ARNTL2;;chr17:41623009..41623053,-!p4@ETV4!1.01!15.08!ETV4;;chr9:4300050..4300118,-!p1@GLIS3!1.00!59.48!GLIS3;;chr7:28448965..28448994,+!p2@CREB5!1.00!32.16!CREB5;;chr3:69788576..69788648,+!p1@MITF!0.99!48.10!MITF;;chr2:60780753..60780800,-!p1@BCL11A!0.99!43.83!BCL11A;;chr19:49864746..49864780,-!p2@TEAD2!0.97!11.67!TEAD2;;chr12:26277994..26278001,-!p6@BHLHE41!0.97!8.25!BHLHE41;;chr8:116681409..116681431,-!p2@TRPS1!0.96!23.05!TRPS1;;chr12:54447599..54447630,+!p3@HOXC4!0.95!9.68!HOXC4;;chr14:29236269..29236285,+!p3@FOXG1!0.95!7.97!FOXG1;;chr3:114343826..114343869,-!p4@ZBTB20!0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ZNF607;;chr19:58920000..58920057,+!p1@ZNF584!0.27!5.69!ZNF584;;chr7:99647389..99647410,+!p1@ZSCAN21!0.27!5.41!ZSCAN21;;chr20:39946361..39946379,-!p2@ZHX3!0.27!4.27!ZHX3;;chr19:37958318..37958365,-!p2@ZNF569!0.27!3.70!ZNF569;;chr17:46655730..46655791,-!p1@HOXB4!0.27!3.42!HOXB4;;chr1:249153232..249153251,-!p2@ZNF692!0.27!3.13!ZNF692;;chr19:56879472..56879529,+!p2@ZNF542!0.27!2.85!ZNF542;;chr16:30621615..30621660,-!p2@ZNF689!0.27!2.28!ZNF689;;chr19:35168547..35168564,+!p3@ZNF302!0.27!1.42!ZNF302;;chr1:27023752..27023799,+!p4@ARID1A!0.27!1.42!ARID1A;;chr20:42136308..42136358,+!p2@L3MBTL1!0.27!1.42!L3MBTL;;chr1:23857325..23857416,-!p2@E2F2!0.27!1.14!E2F2;;chr4:149363544..149363583,-!p3@NR3C2!0.27!1.14!NR3C2;;chr6:20402070..20402082,+!p5@E2F3!0.27!1.14!E2F3;;chr7:106826626..106826630,+!p3@HBP1!0.27!1.14!HBP1;;chr13:73636252..73636307,+!p2@KLF5!0.27!1.14!KLF5;;chr10:104154415..104154434,+!p5@NFKB2!0.27!0.85!NFKB2;;chr10:124768217..124768228,-!p2@IKZF5!0.27!0.85!IKZF5;;chr10:28032548..28032559,-!p7@MKX!0.27!0.85!MKX;;chr11:16419067..16419077,-!p23@SOX6!0.27!0.85!SOX6;;chr11:31832658..31832681,-!p1@PAX6!0.27!0.85!PAX6;;chr11:65480222..65480241,+!p4@KAT5!0.27!0.85!KAT5;;chr12:51157232..51157277,+!p6@ATF1!0.27!0.85!ATF1;;chr12:54379477..54379498,+!p5@HOXC5!0.27!0.85!HOXC5;;chr12:54447219..54447237,+!p6@HOXC4!0.27!0.85!HOXC4;;chr12:80084120..80084136,-!p15@PAWR!0.27!0.85!PAWR;;chr13:100634111..100634118,+!p8@ZIC2!0.27!0.85!ZIC2;;chr14:29234870..29234930,+!p7@FOXG1!0.27!0.85!FOXG1;;chr14:36989427..36989442,-!p1@NKX2-1!0.27!0.85!NKX2-1;;chr14:69260437..69260442,-!p10@ZFP36L1!0.27!0.85!ZFP36L1;;chr14:69263043..69263069,-!p8@ZFP36L1!0.27!0.85!ZFP36L1;;chr2:10091783..10091811,+!p2@GRHL1!0.27!0.85!GRHL1;;chr2:176969179..176969226,+!p2@HOXD11!0.27!0.85!HOXD11;;chr2:176987441..176987454,+!p1@HOXD9!0.27!0.85!HOXD9;;chr2:180427235..180427244,-!p10@ZNF385B!0.27!0.85!ZNF385B;;chr2:191906489..191906517,-!p6@STAT4!0.27!0.85!STAT4;;chr2:237077022..237077038,-!p1@GBX2!0.27!0.85!GBX2;;chr2:60778062..60778075,-!p6@BCL11A!0.27!0.85!BCL11A;;chr3:141868208..141868219,-!p11@TFDP2!0.27!0.85!TFDP2;;chr3:170076246..170076261,+!p8@SKIL!0.27!0.85!SKIL;;chr3:69812731..69812742,+!p19@MITF!0.27!0.85!MITF;;chr3:69812764..69812775,+!p18@MITF!0.27!0.85!MITF;;chr3:69812852..69812864,+!p17@MITF!0.27!0.85!MITF;;chr16:30102849..30102865,-!p2@TBX6!0.27!0.85!TBX6;;chr17:46621146..46621180,-!p10@HOXB2!0.27!0.85!HOXB2;;chr17:46682321..46682362,-!p1@HOXB6!0.27!0.85!HOXB6;;chr17:46691990..46692004,-!p11@HOXB8!0.27!0.85!HOXB8;;chr17:46692624..46692659,-!p3@HOXB8!0.27!0.85!HOXB8;;chr17:46703212..46703238,-!p2@HOXB9!0.27!0.85!HOXB9;;chr17:46703478..46703488,-!p9@HOXB9!0.27!0.85!HOXB9;;chr17:48045917..48045977,+!p1@DLX4!0.27!0.85!DLX4;;chr17:79881409..79881423,-!p8@MAFG!0.27!0.85!MAFG;;chr19:12405588..12405595,-!p4@ZNF44!0.27!0.85!ZNF44;;chr19:12595565..12595576,-!p3@ZNF709!0.27!0.85!ZNF709;;chr19:20188831..20188844,+!p2@ZNF90!0.27!0.85!ZNF90;;chr19:37096126..37096137,-!p4@ZNF529!0.27!0.85!ZNF529;;chr19:37958064..37958076,-!p4@ZNF569!0.27!0.85!ZNF569;;chr19:38183103..38183114,-!p5@ZNF781!0.27!0.85!ZNF781;;chr19:44488402..44488405,+!p3@ZNF155!0.27!0.85!ZNF155;;chr19:44716768..44716775,+!p2@ZNF227!0.27!0.85!ZNF227;;chr19:46806868..46806883,+!p3@HIF3A!0.27!0.85!HIF3A;;chr19:53758167..53758190,-!p3@ZNF677!0.27!0.85!ZNF677;;chr19:57352109..57352153,-!p2@ZIM2!0.27!0.85!ZIM2;;chr1:37945588..37945604,+!p3@ZC3H12A!0.27!0.85!ZC3H12A;;chr1:40105299..40105326,-!p1@HEYL!0.27!0.85!HEYL;;chr20:18038521..18038571,-!p1@OVOL2!0.27!0.85!OVOL2;;chr20:62339469..62339470,+!p10@ZGPAT!0.27!0.85!ZGPAT;;chr5:170736243..170736279,+!p1@TLX3!0.27!0.85!TLX3;;chr5:56248032..56248039,-!p3@MIER3!0.27!0.85!MIER3;;chr6:10412477..10412490,-!p10@TFAP2A!0.27!0.85!TFAP2A;;chr6:10419884..10419898,-!p11@TFAP2A!0.27!0.85!TFAP2A;;chr6:10420285..10420304,-!p18@TFAP2A!0.27!0.85!TFAP2A;;chr6:126102339..126102351,+!p12@NCOA7!0.27!0.85!NCOA7;;chr6:1610178..1610190,+!p5@FOXC1!0.27!0.85!FOXC1;;chr6:1612219..1612239,+!p8@FOXC1!0.27!0.85!FOXC1;;chr6:28322004..28322023,-!p6@ZNF323!0.27!0.85!ZNF323;;chr7:14029004..14029017,-!p8@ETV1!0.27!0.85!ETV1;;chr7:148982396..148982408,+!p4@ZNF783!0.27!0.85!ZNF783;;chr7:150864780..150864785,-!p1@GBX1!0.27!0.85!GBX1;;chr7:27169801..27169844,-!p2@HOXA4!0.27!0.85!HOXA4;;
|expression_enrichment_score=chr12:66218255..66218304,+!p3@HMGA2!2.18!389.35!HMGA2;;chr2:114036488..114036504,-!p1@PAX8!1.99!96.77!PAX8;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.82!65.18!POU3F3;;chr17:46675558..46675577,-!p2@HOXB6!1.80!62.33!HOXB6;;chr17:48072574..48072597,-!p1@DLX3!1.76!56.35!DLX3;;chr1:201979743..201979762,+!p1@ELF3!1.74!54.36!ELF3;;chr6:10415484..10415508,-!p3@TFAP2A!1.72!51.23!TFAP2A;;chr11:34642612..34642646,+!p1@EHF!1.68!46.68!EHF;;chr7:27192185..27192209,-!p1@HOXA3!1.64!42.41!HOXA3;;chr7:27205136..27205164,-!p1@HOXA9!1.62!40.98!HOXA9;;chr12:66218212..66218244,+!p5@HMGA2!1.60!55.50!HMGA2;;chr7:27205106..27205134,-!p2@HOXA9!1.60!38.99!HOXA9;;chr17:46622205..46622218,-!p3@HOXB2!1.58!42.12!HOXB2;;chr17:36105042..36105060,-!p1@HNF1B!1.57!36.15!HNF1B;;chr12:66218378..66218401,+!p6@HMGA2!1.56!53.51!HMGA2;;chr12:26277956..26277980,-!p1@BHLHE41!1.55!118.97!BHLHE41;;chr12:26277817..26277863,-!p2@BHLHE41!1.55!45.82!BHLHE41;;chr6:126240442..126240459,+!p4@NCOA7!1.55!43.26!NCOA7;;chr7:27153454..27153469,-!p2@HOXA3!1.54!33.87!HOXA3;;chr12:66218183..66218209,+!p4@HMGA2!1.51!58.91!HMGA2;;chr17:46703687..46703740,-!p1@HOXB9!1.45!27.32!HOXB9;;chr12:66218836..66218888,+!p1@HMGA2!1.44!237.36!HMGA2;;chr12:66218443..66218461,+!p8@HMGA2!1.41!31.31!HMGA2;;chr6:10415276..10415341,-!p2@TFAP2A!1.37!27.61!TFAP2A;;chr7:27196217..27196246,-!p2@HOXA7!1.37!22.48!HOXA7;;chr3:12330560..12330579,+!p1@PPARG!1.36!25.05!PPARG;;chr1:201979703..201979721,+!p2@ELF3!1.35!21.35!ELF3;;chr17:46667594..46667619,-!p1@HOXB3!1.34!21.06!HOXB3;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.34!20.78!ZBED1;;chr6:126240380..126240430,+!p2@NCOA7!1.33!51.51!NCOA7;;chr6:10412600..10412637,-!p1@TFAP2A!1.33!33.58!TFAP2A;;chr12:26278008..26278024,-!p4@BHLHE41!1.33!24.48!BHLHE41;;chr7:63505799..63505904,+!p1@ZNF727!1.33!20.49!ZNF727;;chr12:27485785..27485816,+!p1@ARNTL2!1.31!130.64!ARNTL2;;chr18:55102628..55102646,+!p2@ONECUT2!1.31!19.64!ONECUT2;;chr12:66218420..66218439,+!p12@HMGA2!1.31!19.35!HMGA2;;chr9:100615499..100615519,+!p1@FOXE1!1.31!19.35!FOXE1;;chr12:66218598..66218645,+!p2@HMGA2!1.28!82.54!HMGA2;;chr12:26278030..26278039,-!p7@BHLHE41!1.26!17.08!BHLHE41;;chr6:19837592..19837621,+!p1@ID4!1.24!99.33!ID4;;chr2:46524897..46524911,+!p2@EPAS1!1.24!44.97!EPAS1;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.21!15.37!POU3F3;;chr14:29234581..29234601,+!p2@FOXG1!1.21!15.37!FOXG1;;chr7:113726357..113726443,+!p1@FOXP2!1.19!25.05!FOXP2;;chr7:28610099..28610113,+!p5@CREB5!1.18!14.23!CREB5;;chr18:55102598..55102623,+!p1@ONECUT2!1.18!14.23!ONECUT2;;chr13:100634031..100634045,+!p1@ZIC2!1.17!13.66!ZIC2;;chr7:26191809..26191890,+!p1@NFE2L3!1.16!66.03!NFE2L3;;chr8:77593474..77593612,+!p1@ZFHX4!1.16!57.21!ZFHX4;;chr12:27485762..27485776,+!p3@ARNTL2!1.16!36.15!ARNTL2;;chr17:46688334..46688385,-!p1@HOXB7!1.16!19.35!HOXB7;;chr19:53496768..53496799,-!p1@ZNF702P!1.15!20.49!ZNF702P;;chr7:57509877..57509895,+!p1@ZNF716!1.15!13.09!ZNF716;;chr12:26277929..26277955,-!p3@BHLHE41!1.13!17.93!BHLHE41;;chr6:126240463..126240489,+!p6@NCOA7!1.13!13.95!NCOA7;;chr3:141747459..141747475,-!p1@TFDP2!1.11!99.61!TFDP2;;chr12:66357214..66357233,+!p13@HMGA2!1.11!11.95!HMGA2;;chr17:46675619..46675642,-!p5@HOXB6!1.11!11.95!HOXB6;;chr17:41622765..41622821,-!p2@ETV4!1.10!17.65!ETV4;;chr17:46622229..46622257,-!p6@HOXB2!1.10!13.66!HOXB2;;chr3:169381420..169381535,-!p1@MECOM!1.09!13.38!MECOM;;chr17:46622440..46622477,-!p5@HOXB2!1.09!12.81!HOXB2;;chr8:102504651..102504683,+!p1@GRHL2!1.09!11.38!GRHL2;;chr5:137804405..137804444,+!p3@EGR1!1.08!13.38!EGR1;;chr8:55370487..55370503,+!p1@SOX17!1.08!11.10!SOX17;;chr12:66218003..66218018,+!p9@HMGA2!1.07!13.09!HMGA2;;chr6:28321909..28321965,-!p3@ZNF323!1.07!10.82!ZNF323;;chr19:53758058..53758088,-!p2@ZNF677!1.05!33.87!ZNF677;;chr13:100623375..100623425,-!p1@ZIC5!1.05!10.25!ZIC5;;chr2:200322654..200322707,-!p2@SATB2!1.04!14.52!SATB2;;chr4:149363475..149363492,-!p2@NR3C2!1.04!9.96!NR3C2;;chr12:66218152..66218174,+!p10@HMGA2!1.03!10.53!HMGA2;;chr14:29235961..29236008,+!p1@FOXG1!1.03!9.68!FOXG1;;chr3:69915385..69915438,+!p3@MITF!1.03!9.68!MITF;;chr4:149363494..149363543,-!p1@NR3C2!1.03!9.68!NR3C2;;chr17:46671108..46671147,-!p1@HOXB5!1.03!9.68!HOXB5;;chr16:51185172..51185197,-!p1@SALL1!1.02!9.39!SALL1;;chr17:41622731..41622764,-!p5@ETV4!1.02!9.39!ETV4;;chr6:10419768..10419819,-!p6@TFAP2A!1.02!9.39!TFAP2A;;chr12:27485823..27485868,+!p2@ARNTL2!1.01!37.85!ARNTL2;;chr17:41623009..41623053,-!p4@ETV4!1.01!15.08!ETV4;;chr9:4300050..4300118,-!p1@GLIS3!1.00!59.48!GLIS3;;chr7:28448965..28448994,+!p2@CREB5!1.00!32.16!CREB5;;chr3:69788576..69788648,+!p1@MITF!0.99!48.10!MITF;;chr2:60780753..60780800,-!p1@BCL11A!0.99!43.83!BCL11A;;chr19:49864746..49864780,-!p2@TEAD2!0.97!11.67!TEAD2;;chr12:26277994..26278001,-!p6@BHLHE41!0.97!8.25!BHLHE41;;chr8:116681409..116681431,-!p2@TRPS1!0.96!23.05!TRPS1;;chr12:54447599..54447630,+!p3@HOXC4!0.95!9.68!HOXC4;;chr14:29236269..29236285,+!p3@FOXG1!0.95!7.97!FOXG1;;chr3:114343826..114343869,-!p4@ZBTB20!0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ZNF607;;chr19:58920000..58920057,+!p1@ZNF584!0.27!5.69!ZNF584;;chr7:99647389..99647410,+!p1@ZSCAN21!0.27!5.41!ZSCAN21;;chr20:39946361..39946379,-!p2@ZHX3!0.27!4.27!ZHX3;;chr19:37958318..37958365,-!p2@ZNF569!0.27!3.70!ZNF569;;chr17:46655730..46655791,-!p1@HOXB4!0.27!3.42!HOXB4;;chr1:249153232..249153251,-!p2@ZNF692!0.27!3.13!ZNF692;;chr19:56879472..56879529,+!p2@ZNF542!0.27!2.85!ZNF542;;chr16:30621615..30621660,-!p2@ZNF689!0.27!2.28!ZNF689;;chr19:35168547..35168564,+!p3@ZNF302!0.27!1.42!ZNF302;;chr1:27023752..27023799,+!p4@ARID1A!0.27!1.42!ARID1A;;chr20:42136308..42136358,+!p2@L3MBTL1!0.27!1.42!L3MBTL;;chr1:23857325..23857416,-!p2@E2F2!0.27!1.14!E2F2;;chr4:149363544..149363583,-!p3@NR3C2!0.27!1.14!NR3C2;;chr6:20402070..20402082,+!p5@E2F3!0.27!1.14!E2F3;;chr7:106826626..106826630,+!p3@HBP1!0.27!1.14!HBP1;;chr13:73636252..73636307,+!p2@KLF5!0.27!1.14!KLF5;;chr10:104154415..104154434,+!p5@NFKB2!0.27!0.85!NFKB2;;chr10:124768217..124768228,-!p2@IKZF5!0.27!0.85!IKZF5;;chr10:28032548..28032559,-!p7@MKX!0.27!0.85!MKX;;chr11:16419067..16419077,-!p23@SOX6!0.27!0.85!SOX6;;chr11:31832658..31832681,-!p1@PAX6!0.27!0.85!PAX6;;chr11:65480222..65480241,+!p4@KAT5!0.27!0.85!KAT5;;chr12:51157232..51157277,+!p6@ATF1!0.27!0.85!ATF1;;chr12:54379477..54379498,+!p5@HOXC5!0.27!0.85!HOXC5;;chr12:54447219..54447237,+!p6@HOXC4!0.27!0.85!HOXC4;;chr12:80084120..80084136,-!p15@PAWR!0.27!0.85!PAWR;;chr13:100634111..100634118,+!p8@ZIC2!0.27!0.85!ZIC2;;chr14:29234870..29234930,+!p7@FOXG1!0.27!0.85!FOXG1;;chr14:36989427..36989442,-!p1@NKX2-1!0.27!0.85!NKX2-1;;chr14:69260437..69260442,-!p10@ZFP36L1!0.27!0.85!ZFP36L1;;chr14:69263043..69263069,-!p8@ZFP36L1!0.27!0.85!ZFP36L1;;chr2:10091783..10091811,+!p2@GRHL1!0.27!0.85!GRHL1;;chr2:176969179..176969226,+!p2@HOXD11!0.27!0.85!HOXD11;;chr2:176987441..176987454,+!p1@HOXD9!0.27!0.85!HOXD9;;chr2:180427235..180427244,-!p10@ZNF385B!0.27!0.85!ZNF385B;;chr2:191906489..191906517,-!p6@STAT4!0.27!0.85!STAT4;;chr2:237077022..237077038,-!p1@GBX2!0.27!0.85!GBX2;;chr2:60778062..60778075,-!p6@BCL11A!0.27!0.85!BCL11A;;chr3:141868208..141868219,-!p11@TFDP2!0.27!0.85!TFDP2;;chr3:170076246..170076261,+!p8@SKIL!0.27!0.85!SKIL;;chr3:69812731..69812742,+!p19@MITF!0.27!0.85!MITF;;chr3:69812764..69812775,+!p18@MITF!0.27!0.85!MITF;;chr3:69812852..69812864,+!p17@MITF!0.27!0.85!MITF;;chr16:30102849..30102865,-!p2@TBX6!0.27!0.85!TBX6;;chr17:46621146..46621180,-!p10@HOXB2!0.27!0.85!HOXB2;;chr17:46682321..46682362,-!p1@HOXB6!0.27!0.85!HOXB6;;chr17:46691990..46692004,-!p11@HOXB8!0.27!0.85!HOXB8;;chr17:46692624..46692659,-!p3@HOXB8!0.27!0.85!HOXB8;;chr17:46703212..46703238,-!p2@HOXB9!0.27!0.85!HOXB9;;chr17:46703478..46703488,-!p9@HOXB9!0.27!0.85!HOXB9;;chr17:48045917..48045977,+!p1@DLX4!0.27!0.85!DLX4;;chr17:79881409..79881423,-!p8@MAFG!0.27!0.85!MAFG;;chr19:12405588..12405595,-!p4@ZNF44!0.27!0.85!ZNF44;;chr19:12595565..12595576,-!p3@ZNF709!0.27!0.85!ZNF709;;chr19:20188831..20188844,+!p2@ZNF90!0.27!0.85!ZNF90;;chr19:37096126..37096137,-!p4@ZNF529!0.27!0.85!ZNF529;;chr19:37958064..37958076,-!p4@ZNF569!0.27!0.85!ZNF569;;chr19:38183103..38183114,-!p5@ZNF781!0.27!0.85!ZNF781;;chr19:44488402..44488405,+!p3@ZNF155!0.27!0.85!ZNF155;;chr19:44716768..44716775,+!p2@ZNF227!0.27!0.85!ZNF227;;chr19:46806868..46806883,+!p3@HIF3A!0.27!0.85!HIF3A;;chr19:53758167..53758190,-!p3@ZNF677!0.27!0.85!ZNF677;;chr19:57352109..57352153,-!p2@ZIM2!0.27!0.85!ZIM2;;chr1:37945588..37945604,+!p3@ZC3H12A!0.27!0.85!ZC3H12A;;chr1:40105299..40105326,-!p1@HEYL!0.27!0.85!HEYL;;chr20:18038521..18038571,-!p1@OVOL2!0.27!0.85!OVOL2;;chr20:62339469..62339470,+!p10@ZGPAT!0.27!0.85!ZGPAT;;chr5:170736243..170736279,+!p1@TLX3!0.27!0.85!TLX3;;chr5:56248032..56248039,-!p3@MIER3!0.27!0.85!MIER3;;chr6:10412477..10412490,-!p10@TFAP2A!0.27!0.85!TFAP2A;;chr6:10419884..10419898,-!p11@TFAP2A!0.27!0.85!TFAP2A;;chr6:10420285..10420304,-!p18@TFAP2A!0.27!0.85!TFAP2A;;chr6:126102339..126102351,+!p12@NCOA7!0.27!0.85!NCOA7;;chr6:1610178..1610190,+!p5@FOXC1!0.27!0.85!FOXC1;;chr6:1612219..1612239,+!p8@FOXC1!0.27!0.85!FOXC1;;chr6:28322004..28322023,-!p6@ZNF323!0.27!0.85!ZNF323;;chr7:14029004..14029017,-!p8@ETV1!0.27!0.85!ETV1;;chr7:148982396..148982408,+!p4@ZNF783!0.27!0.85!ZNF783;;chr7:150864780..150864785,-!p1@GBX1!0.27!0.85!GBX1;;chr7:27169801..27169844,-!p2@HOXA4!0.27!0.85!HOXA4;;
Line 38: Line 41:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/endometrial%2520carcinoma%2520cell%2520line%253aOMC-2.CNhs11266.10497-107C2.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/endometrial%2520carcinoma%2520cell%2520line%253aOMC-2.CNhs11266.10497-107C2.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/endometrial%2520carcinoma%2520cell%2520line%253aOMC-2.CNhs11266.10497-107C2.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/endometrial%2520carcinoma%2520cell%2520line%253aOMC-2.CNhs11266.10497-107C2.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/endometrial%2520carcinoma%2520cell%2520line%253aOMC-2.CNhs11266.10497-107C2.hg38.nobarcode.ctss.bed.gz
|id=FF:10497-107C2
|id=FF:10497-107C2
|is_a=EFO:0002091;;FF:0000210;;FF:0100167;;FF:0101555
|is_a=EFO:0002091;;FF:0000210;;FF:0100167;;FF:0101555
|is_obsolete=
|is_obsolete=
|library_id=CNhs11266
|library_id_phase_based=2:CNhs11266
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10497
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10497
|name=endometrial carcinoma cell line:OMC-2
|name=endometrial carcinoma cell line:OMC-2
|namespace=FANTOM5
|namespace=FANTOM5
Line 46: Line 60:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs11266,LSID758,release008,COMPLETED
|profile_hcage=CNhs11266,LSID758,release008,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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Line 61: Line 78:
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|sample_cell_line=OMC-2
Line 82: Line 100:
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|top_motifs=ADNP_IRX_SIX_ZHX:2.16663155594;SNAI1..3:1.80391977986;HNF1A:1.74224735689;ONECUT1,2:1.67592685731;ZEB1:1.57791447346;ELK1,4_GABP{A,B1}:1.37408278796;PITX1..3:1.33115032621;FOXQ1:1.2628866333;NR6A1:1.24608690638;MYOD1:1.19700713937;DBP:1.17867016532;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.12561946858;ESR1:1.10112638195;IKZF1:1.08286799044;NKX6-1,2:1.07540680339;ZBTB16:1.0419450813;HOX{A6,A7,B6,B7}:1.039259073;NKX2-3_NKX2-5:1.01675170907;STAT1,3:0.997768640154;RBPJ:0.932350481064;bHLH_family:0.928679163368;TBX4,5:0.919192015941;EN1,2:0.891587424118;HOXA9_MEIS1:0.856441437046;CRX:0.840043535287;HOX{A4,D4}:0.83511000054;PPARG:0.83067732979;RORA:0.810368888444;GFI1:0.77093501947;VSX1,2:0.735692064884;STAT5{A,B}:0.714706814226;ESRRA:0.703384202925;FOXN1:0.701062064863;HAND1,2:0.695322848168;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.67095087852;MYB:0.670584339241;PAX4:0.664627020424;FOXP1:0.604038300662;SP1:0.602586131569;FOXA2:0.602548188566;E2F1..5:0.5639685066;NKX3-2:0.544671147788;LHX3,4:0.542469145856;T:0.542348760609;ZNF143:0.51152941136;ZNF148:0.505764802594;PATZ1:0.502246933065;RXRA_VDR{dimer}:0.475487233774;NFY{A,B,C}:0.474075435616;TEF:0.464024371201;FOX{I1,J2}:0.444349562154;NFE2:0.442979023494;POU1F1:0.435102366311;TOPORS:0.420983553791;HBP1_HMGB_SSRP1_UBTF:0.388217802039;CUX2:0.372729463013;MZF1:0.34467995943;LMO2:0.343917323429;TLX1..3_NFIC{dimer}:0.342737174762;OCT4_SOX2{dimer}:0.342421634346;CDC5L:0.342294283184;NFIX:0.336770121361;RXR{A,B,G}:0.335166064196;AIRE:0.335072378656;NFE2L2:0.323273169101;NKX2-1,4:0.318991522586;TEAD1:0.317191797618;NRF1:0.303772967282;IRF7:0.302680727756;RFX1:0.296374144896;ALX4:0.294946207605;PDX1:0.290039049566;CDX1,2,4:0.281642581116;IKZF2:0.247017618686;FOXD3:0.246453979333;LEF1_TCF7_TCF7L1,2:0.240321094158;FOXL1:0.228706433046;EVI1:0.222306234499;ZNF423:0.217338744395;PRRX1,2:0.195875552143;CEBPA,B_DDIT3:0.168257896782;HOX{A5,B5}:0.157103092692;SREBF1,2:0.150909572894;PBX1:0.150540410345;NFKB1_REL_RELA:0.1489298411;POU5F1:0.144937728836;HNF4A_NR2F1,2:0.132134879808;YY1:0.115573812338;RREB1:0.105921729498;NR5A1,2:0.0695607783923;GLI1..3:0.0679216101424;BPTF:0.0485650683974;XBP1:0.0399158548928;HLF:0.0369859058004;SOX17:0.0226531378458;HMGA1,2:0.0177402790242;ARID5B:0.0174379470385;ATF2:0.0116294935949;FOSL2:0.00553410148699;SOX{8,9,10}:0.00221583843897;POU2F1..3:0.000340374063752;NR1H4:-0.0180423577584;FOX{F1,F2,J1}:-0.0244017960216;FOX{D1,D2}:-0.0366451713511;GFI1B:-0.0443810091955;ALX1:-0.079064941019;TP53:-0.104951378987;ELF1,2,4:-0.109166874629;IRF1,2:-0.11559351041;XCPE1{core}:-0.131503789705;RFX2..5_RFXANK_RFXAP:-0.133613460604;STAT2,4,6:-0.134687196666;BACH2:-0.147395786753;FOS_FOS{B,L1}_JUN{B,D}:-0.156348492351;AR:-0.172936850807;KLF4:-0.183430138007;TFCP2:-0.190202976454;GATA6:-0.206078221181;MAZ:-0.210256201167;FOXM1:-0.227765661748;ATF6:-0.255861370256;PAX3,7:-0.258800464793;MED-1{core}:-0.270289685516;TLX2:-0.279271777123;ZFP161:-0.28533045508;ZBTB6:-0.293414989928;REST:-0.305530945987;NR3C1:-0.317747873424;MEF2{A,B,C,D}:-0.324731335714;NFIL3:-0.332882510691;SOX2:-0.360313160394;PAX6:-0.366875171512;GTF2I:-0.369903116883;GTF2A1,2:-0.377318093964;EGR1..3:-0.379721674159;PAX5:-0.386491943037;MYFfamily:-0.386772245878;PAX8:-0.388677068851;SOX5:-0.405187058305;FOXO1,3,4:-0.410050876569;MYBL2:-0.410664658208;NANOG:-0.415681002635;AHR_ARNT_ARNT2:-0.453941495131;ZIC1..3:-0.484142659573;POU3F1..4:-0.496932659726;BREu{core}:-0.503306699888;ATF4:-0.507132782084;ATF5_CREB3:-0.520254062867;ETS1,2:-0.532440340361;DMAP1_NCOR{1,2}_SMARC:-0.536634492265;HIC1:-0.543008844815;EBF1:-0.562523929671;SRF:-0.56448682284;TFAP2{A,C}:-0.567289495273;MTE{core}:-0.573430946837;TFDP1:-0.57527100384;PAX2:-0.591130493316;FOXP3:-0.596283304626;SPI1:-0.603887827371;SPIB:-0.623656534856;TFAP2B:-0.625207693179;TAL1_TCF{3,4,12}:-0.64843460203;POU6F1:-0.652577549168;UFEwm:-0.664760378522;SPZ1:-0.669217625123;MTF1:-0.673588762376;NKX3-1:-0.67394151736;GCM1,2:-0.719911880538;NFE2L1:-0.737035883015;JUN:-0.740008532859;EP300:-0.74355620674;PRDM1:-0.743730974297;NHLH1,2:-0.749660302503;HSF1,2:-0.76583770572;RUNX1..3:-0.870479589471;CREB1:-0.874687613965;ZNF384:-0.892598126465;PAX1,9:-0.894578436575;NANOG{mouse}:-0.914160436794;TBP:-0.97127518261;TGIF1:-1.04784730796;ZNF238:-1.10090948979;HIF1A:-1.11164588745;GZF1:-1.12217569769;HES1:-1.14492249943;NKX2-2,8:-1.1730579574;SMAD1..7,9:-1.27308306471;NFATC1..3:-1.33040038049;MAFB:-1.43619825898;TFAP4:-1.95055574357;GATA4:-2.05966442003;HMX1:-2.10460156596
|xref=
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10497-107C2;search_select_hide=table117:FF:10497-107C2
}}
}}

Latest revision as of 14:27, 3 June 2020

Name:endometrial carcinoma cell line:OMC-2
Species:Human (Homo sapiens)
Library ID:CNhs11266
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueendometrium
dev stageNA
sexfemale
age59
cell typeunclassifiable
cell lineOMC-2
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005280
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11266 CAGE DRX007876 DRR008748
Accession ID Hg19

Library idBAMCTSS
CNhs11266 DRZ000173 DRZ001558
Accession ID Hg38

Library idBAMCTSS
CNhs11266 DRZ011523 DRZ012908
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.109
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.177
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0159
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.221
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.109
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0559
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0775
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.245
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.419
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0315
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.139
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.0185
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11266

Jaspar motifP-value
MA0002.20.0354
MA0003.10.894
MA0004.10.247
MA0006.10.59
MA0007.10.42
MA0009.10.455
MA0014.10.271
MA0017.10.0156
MA0018.20.0145
MA0019.10.998
MA0024.10.18
MA0025.10.159
MA0027.10.895
MA0028.17.06449e-8
MA0029.10.401
MA0030.10.932
MA0031.10.857
MA0035.20.445
MA0038.10.00183
MA0039.20.00629
MA0040.10.608
MA0041.10.268
MA0042.10.089
MA0043.10.418
MA0046.11.79216e-22
MA0047.20.889
MA0048.10.496
MA0050.10.405
MA0051.10.0214
MA0052.12.57389e-4
MA0055.10.00988
MA0057.10.87
MA0058.10.04
MA0059.10.00255
MA0060.16.59794e-5
MA0061.10.544
MA0062.21.31194e-7
MA0065.21.50982e-5
MA0066.10.619
MA0067.10.03
MA0068.10.288
MA0069.10.84
MA0070.10.521
MA0071.10.417
MA0072.10.854
MA0073.10.74
MA0074.10.637
MA0076.16.97788e-9
MA0077.10.146
MA0078.10.392
MA0079.20.525
MA0080.21.41494e-6
MA0081.10.0583
MA0083.10.533
MA0084.10.0379
MA0087.10.737
MA0088.10.145
MA0090.10.875
MA0091.10.00732
MA0092.10.581
MA0093.10.119
MA0099.20.98
MA0100.10.266
MA0101.10.273
MA0102.20.665
MA0103.11.23189e-7
MA0104.20.138
MA0105.10.0445
MA0106.10.54
MA0107.10.36
MA0108.22.62217e-6
MA0111.10.922
MA0112.20.159
MA0113.10.239
MA0114.16.96878e-5
MA0115.10.0017
MA0116.10.918
MA0117.10.0705
MA0119.10.296
MA0122.10.259
MA0124.10.48
MA0125.10.141
MA0131.10.243
MA0135.10.0469
MA0136.10.0136
MA0137.20.339
MA0138.20.259
MA0139.10.185
MA0140.10.212
MA0141.10.862
MA0142.10.183
MA0143.10.54
MA0144.10.867
MA0145.10.0442
MA0146.10.0771
MA0147.10.0784
MA0148.10.651
MA0149.10.73
MA0150.10.399
MA0152.10.495
MA0153.13.14106e-20
MA0154.10.381
MA0155.10.554
MA0156.10.933
MA0157.10.872
MA0159.10.0128
MA0160.10.548
MA0162.10.771
MA0163.10.747
MA0164.10.15
MA0258.10.215
MA0259.10.583



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11266

Novel motifP-value
10.289
100.948
1000.103
1010.393
1020.397
1030.622
1040.77
1050.363
1060.982
1070.439
1080.934
1090.298
110.996
1100.233
1110.186
1120.844
1130.256
1140.93
1150.0652
1160.512
1170.011
1180.772
1190.875
120.244
1200.249
1210.617
1220.312
1230.751
1240.485
1250.169
1260.635
1270.221
1280.258
1290.228
130.0056
1300.852
1310.509
1320.539
1330.0125
1340.198
1350.00522
1360.07
1370.125
1380.457
1390.514
140.985
1400.0998
1410.274
1420.915
1430.00132
1440.382
1450.748
1460.777
1470.216
1480.735
1490.339
150.904
1500.572
1510.992
1520.169
1530.277
1540.0975
1550.915
1560.796
1570.487
1580.651
1590.318
160.631
1600.402
1610.338
1620.871
1630.996
1640.154
1650.475
1660.693
1670.87
1680.462
1690.0705
170.448
180.29
190.92
20.367
200.158
210.877
220.967
230.532
240.271
250.491
260.931
270.351
280.297
290.887
30.567
300.172
310.896
320.0807
330.227
340.883
350.971
360.489
370.137
380.582
390.84
40.995
400.383
410.00161
420.56
430.996
440.727
450.243
460.995
470.258
480.512
490.779
50.824
500.203
510.803
520.645
530.828
540.886
550.928
560.526
570.324
580.589
590.542
60.764
600.458
610.0411
620.236
630.453
640.966
650.69
660.263
670.403
680.043
690.395
70.781
700.851
710.183
720.912
730.46
740.148
750.0347
760.88
770.196
780.776
790.00252
80.505
800.229
810.0346
820.201
830.334
840.274
850.259
860.471
870.0192
880.0352
890.62
90.403
900.178
910.268
920.783
930.58
940.136
950.172
960.23
970.765
980.849
990.85



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11266


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000499 (stromal cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002149 (epithelial cell of uterus)
0002255 (stromal cell of endometrium)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
193 (reproductive organ cancer)
305 (carcinoma)
120 (female reproductive organ cancer)
299 (adenocarcinoma)
3001 (female reproductive endometrioid cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000995 (uterus)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100167 (adenocarcinoma cell line sample)
0101555 (endometrial cancer cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000223 (endodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)

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