FF:10603-108E9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00004815 | ||
|accession_numbers=CAGE;DRX007875;DRR008747;DRZ000172;DRZ001557;DRZ011522;DRZ012907 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0001264,UBERON:0002100,UBERON:0000466,UBERON:0002075,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002323,UBERON:0005177,UBERON:0000464,UBERON:0004458,UBERON:0000949 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100669 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
| | |||
|fonse_cell_line=FF:0100669 | |fonse_cell_line=FF:0100669 | ||
|fonse_cell_line_closure=FF:0100669 | |fonse_cell_line_closure=FF:0100669 | ||
| Line 35: | Line 40: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a2C6.CNhs11814.10603-108E9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a2C6.CNhs11814.10603-108E9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a2C6.CNhs11814.10603-108E9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a2C6.CNhs11814.10603-108E9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/embryonic%2520pancreas%2520cell%2520line%253a2C6.CNhs11814.10603-108E9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10603-108E9 | |id=FF:10603-108E9 | ||
|is_a=EFO:0002091 | |is_a=EFO:0002091;;FF:0000210;;FF:0100669;;UBERON:0001264 | ||
|is_obsolete= | |||
|library_id=CNhs11814 | |||
|library_id_phase_based=2:CNhs11814 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10603 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10603 | |||
|name=embryonic pancreas cell line:2C6 | |name=embryonic pancreas cell line:2C6 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 59: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11814,LSID829,release010,COMPLETED | |profile_hcage=CNhs11814,LSID829,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0.34137997173303,-0.241973256871817,0.098518923547233,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,0.208423381954168,0,0,0,0,0,0,0,0,0,0,0,0,-0.145899716966013,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186586199614288,0,0,0,0.205618476286652,-0.0405074168293536,0,0,0,0,-0.0980353512377064,0.0322127850656199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,-0.0545073476822096,-0.336915820592028,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.0980353512377064,0,0,0,0,0,0,0,0,0,0,0,0.0942010964474658,0.141451162555647,-0.474086218752008,-0.143515142523472,0,0,0.293852496088982,0,0.34137997173303,0,0,0,0,0,0,0,-0.128119866952565,0,-0.0504125515893149,0,0,0,0,-0.0186252810838506,-0.305472230898407,0,-0.17425806114951,-0.0683442610773682,0,0,0,0,-0.270240669334324,0,-0.120879483793741,-0.0827201683234173,-0.221611588102807,-0.269337691510831,-0.055712496781182,0,0,0,-0.518076500471619,-0.256533945144538,0,0,-0.121779851751874,0.319970861700648,0,0,-0.391044581551635,0,-0.139527115369377,-0.248868050382253,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0574934668214365,0.334272392110615,-0.0304099808375785,0,0,0,0.427057038780809,0,0,0.930246592512854,0.101303422640115,0.0827975493282815,0.187982117714686,0,-0.302389727009913,-0.236916108852298,0.265484676512499,-0.034614937513874,-0.147401849371139,-0.189981719549847,0,0.264592489909732,0.125861485118739,0.183515806524136,0.196158750555462,-0.0234800713607888,-0.70127945652275,0.468128704726298,0,0,0,-0.235014735473075,0,0,-0.490114714476774,0.268519944833719,-0.0466803469081438,0.122445761425195,0.360905896925522,0.376579943910028,-0.0395325284566706,-0.457436452896595,0,-0.0801923531706695,0,0,0,-0.0613184470281904,0.185506167054889,0.227632198044147,0,-0.14259749007795,-0.0683442610773682,0,-0.00595472440870725,0.223205180447468,0,0,0.264681140351414,0,0,0,0,0,-0.0849537650094574,0.30396622819266,0.108524410177485,0,0.144294475441978,0,0.0333444140422057,0,-0.082099705149776,0.0412990973918004,-0.298074152361292,0.0265172589658536,0,0.134691832529052,-0.166532817183759,-0.0302575696059957,-0.0810148336587072,0.965126372839924,-0.389091962042701,-0.178251599985971,0.205618476286652,-0.447559893057196,0.0378986694706913,-0.0881268324752877,0.00126599111216175,0.186586199614288,0.232635982611227,0.0392701685218708,0.19332122147848,0,0.00678274802028267,0,0.212681286804946,0,0.091452143495341,-0.54043375147324,-0.439289374580686,-0.248638418125873,0,0.267587620269429,-0.446750966040944,0,0.295489098031005,0,0.34137997173303,0.191012888398391,0.0641490017357673,-0.211650427864589,0.0317005291873204,0,0.45853402074548,0,0,0.273467578742936,-0.235476037764389,0,0.191827143492597,-0.0790738624490416,0.157628927053055,0.414157978329421,0,0,0.0155606507968596,0,0,-0.60592806381803,0,0.223675047264192,0.0880536302462746,0,0.0620671764122595,0,0,-0.177527765965176,0,0.0214931757370236,0,0,0.015183229283354,-0.116628112990133,0,0,0,-0.195265690557764,0,0,0,0,0,0,0,0.371471839973358,0.175295721547907,0,0.164053388287405,0,0,0,0,0,-0.110803081130275,0,0,-0.522199888687008,0,-0.12301741567642,0,0,0,0,-0.215723402553475,-0.203236562094724,0,0.209517265235399,0,0,0,0,-0.0861409897892114,0,0,0,0,-0.057730457053664,-0.352393806590435,0,0,0,0.0644255701312398,0,0,0,0,0.27827412354737,0,0,-0.101801121622025,0,-0.131327894032746,-0.0815818795468414,0,-0.222207090524199,-0.636459547292836,0.2567196621999,0,0,0.399913856999697,0,0,-0.192485950410422,0.126850799748924,0,0,0,0,0,0,0,0,-0.214314512399756,0,0,0,0,0,0,0,0,0,0,0,-0.248998843787778,-0.0922240566585104,0,0,0,0,0,0,0,-0.0241060230789031,-0.346071265721879,0,0,0,0,0,0,0,0,-0.471425939663242,0,0,0,0,0,-0.0969923612426051,0,0,0,0,0.197037847094466,0,0,0.0640178395395162,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,-0.241973256871817,0,0,0,0,0,0.34137997173303,0,-0.27483329820609,0,0,0,0,-0.113884373708977,0,0,0,0.556464604000428,0,-0.160318030086386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229095342625061,0,0.34137997173303,0.139210563923551,0,0,0.148294131491133,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0962259712900034,0,0,0,0,0,0,0,-0.0979578962680575,0,0,-0.0920328098005262,0,0,0,0,0,0,0.462796822306574,-0.0181558739409702,0.16973086952681,0,0,0,0.11630441338406,0,0,-0.0105970196155746,0,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136678622591099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,0.128293742075987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25583212183919,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,0.445752419534328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.550504042515712,0,0,0,0,-0.0476371106609188,0,0,0,0,0,0,0,-0.087428497801853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0877693634445252,0,0,-0.318028478722954,0,0,0,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0759105850494183,-0.336915820592028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.089659550225221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0296969223726757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|rna_box=108 | |rna_box=108 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 54: | Line 74: | ||
|rna_rin= | |rna_rin= | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_tube_id= | |rna_tube_id=1.08E+11 | ||
|rna_weight_ug=36.59749 | |rna_weight_ug=36.59749 | ||
|sample_age=19 week embryo | |sample_age=19 week embryo | ||
|sample_category=cell lines | |||
|sample_cell_catalog=RCB0794 | |sample_cell_catalog=RCB0794 | ||
|sample_cell_line=2C6 | |sample_cell_line=2C6 | ||
| Line 69: | Line 90: | ||
|sample_ethnicity=J | |sample_ethnicity=J | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.00478285358822e-246!GO:0043226;organelle;3.26515728701351e-199!GO:0043229;intracellular organelle;1.10128998491474e-198!GO:0043231;intracellular membrane-bound organelle;4.43555212404833e-193!GO:0043227;membrane-bound organelle;6.37382573861709e-193!GO:0005737;cytoplasm;1.10185029414206e-168!GO:0044422;organelle part;1.44537922947428e-142!GO:0044446;intracellular organelle part;3.30800908822144e-141!GO:0044444;cytoplasmic part;6.68792858052215e-108!GO:0032991;macromolecular complex;1.4266797193183e-104!GO:0005634;nucleus;1.05121990093905e-95!GO:0044237;cellular metabolic process;2.87479627021163e-93!GO:0044238;primary metabolic process;1.01471465893075e-90!GO:0043170;macromolecule metabolic process;4.22774670122031e-89!GO:0030529;ribonucleoprotein complex;8.96856946632583e-88!GO:0044428;nuclear part;4.93380851845477e-87!GO:0003723;RNA binding;1.02988870096537e-81!GO:0043233;organelle lumen;7.353240901734e-79!GO:0031974;membrane-enclosed lumen;7.353240901734e-79!GO:0005515;protein binding;1.19037330151041e-74!GO:0043283;biopolymer metabolic process;5.50147888184513e-57!GO:0005739;mitochondrion;3.07503374497714e-56!GO:0006396;RNA processing;7.09447724850976e-56!GO:0031981;nuclear lumen;6.44756765420142e-55!GO:0016043;cellular component organization and biogenesis;1.70822630753751e-54!GO:0043234;protein complex;7.17998498918389e-53!GO:0006412;translation;2.6920141859936e-52!GO:0010467;gene expression;4.47107801265451e-51!GO:0005840;ribosome;8.62551516479635e-51!GO:0019538;protein metabolic process;1.65020152636085e-50!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.23151684861964e-50!GO:0044260;cellular macromolecule metabolic process;2.82447421631866e-46!GO:0044267;cellular protein metabolic process;5.06783113406103e-46!GO:0003735;structural constituent of ribosome;9.15650042911093e-45!GO:0016071;mRNA metabolic process;9.07439010409527e-44!GO:0031090;organelle membrane;3.68401118222159e-41!GO:0033036;macromolecule localization;3.81867923004925e-41!GO:0043228;non-membrane-bound organelle;1.40627893031401e-40!GO:0043232;intracellular non-membrane-bound organelle;1.40627893031401e-40!GO:0015031;protein transport;2.05413382556685e-40!GO:0008380;RNA splicing;7.933055555618e-39!GO:0009059;macromolecule biosynthetic process;9.75200611482368e-39!GO:0033279;ribosomal subunit;1.27938355043671e-38!GO:0006259;DNA metabolic process;2.89517244273633e-38!GO:0044249;cellular biosynthetic process;2.3733591556039e-37!GO:0045184;establishment of protein localization;4.87753203975849e-37!GO:0008104;protein localization;6.34554198168556e-37!GO:0006397;mRNA processing;1.12617448969322e-36!GO:0009058;biosynthetic process;1.78519771272267e-36!GO:0031967;organelle envelope;9.38611814807832e-36!GO:0031975;envelope;1.12739958949736e-35!GO:0044429;mitochondrial part;2.79933852122736e-35!GO:0005829;cytosol;3.46128735447647e-35!GO:0006996;organelle organization and biogenesis;1.48088044565214e-34!GO:0046907;intracellular transport;7.3408364624358e-34!GO:0005654;nucleoplasm;1.45553039760264e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.78297157372523e-33!GO:0000166;nucleotide binding;4.07152859513585e-33!GO:0065003;macromolecular complex assembly;1.80136905456697e-32!GO:0003676;nucleic acid binding;4.24412875752912e-30!GO:0022607;cellular component assembly;2.1283448576603e-28!GO:0044451;nucleoplasm part;6.40781978805822e-28!GO:0005681;spliceosome;1.7534241656886e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.33937796664788e-27!GO:0006886;intracellular protein transport;8.93498746242379e-27!GO:0007049;cell cycle;3.4257657590934e-26!GO:0016462;pyrophosphatase activity;1.03917067225937e-25!GO:0017111;nucleoside-triphosphatase activity;1.85360432517948e-25!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.17894659526585e-25!GO:0016817;hydrolase activity, acting on acid anhydrides;2.79362887985673e-25!GO:0016070;RNA metabolic process;1.35729022109268e-24!GO:0051649;establishment of cellular localization;2.06174145487738e-24!GO:0051641;cellular localization;8.10518005931515e-24!GO:0005730;nucleolus;9.31818122049145e-24!GO:0017076;purine nucleotide binding;5.7504522032255e-23!GO:0032553;ribonucleotide binding;7.23991030633829e-23!GO:0032555;purine ribonucleotide binding;7.23991030633829e-23!GO:0044445;cytosolic part;3.76134579192753e-22!GO:0005740;mitochondrial envelope;5.27209191664122e-22!GO:0019866;organelle inner membrane;6.18354384655491e-22!GO:0008134;transcription factor binding;6.70782723074017e-21!GO:0031966;mitochondrial membrane;1.51167741509133e-20!GO:0015934;large ribosomal subunit;1.54532055745982e-20!GO:0005524;ATP binding;2.31742600301151e-20!GO:0032559;adenyl ribonucleotide binding;3.61117717523315e-20!GO:0006457;protein folding;3.78503335133257e-20!GO:0005743;mitochondrial inner membrane;4.305949806426e-20!GO:0030554;adenyl nucleotide binding;4.46695354821283e-20!GO:0006974;response to DNA damage stimulus;2.09633183778747e-19!GO:0015935;small ribosomal subunit;3.88015208147218e-19!GO:0006512;ubiquitin cycle;1.90593579320444e-18!GO:0022402;cell cycle process;1.92424673164094e-18!GO:0006119;oxidative phosphorylation;2.13092359039051e-18!GO:0016874;ligase activity;2.58952025041566e-18!GO:0022618;protein-RNA complex assembly;3.46221648958498e-18!GO:0005694;chromosome;5.2978264436076e-18!GO:0012505;endomembrane system;1.1458709176196e-17!GO:0016887;ATPase activity;2.36789209338968e-17!GO:0044265;cellular macromolecule catabolic process;2.6040796408926e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;2.88267742679441e-17!GO:0051276;chromosome organization and biogenesis;3.45689143898031e-17!GO:0043285;biopolymer catabolic process;4.03427690360033e-17!GO:0006281;DNA repair;4.24848949111573e-17!GO:0019941;modification-dependent protein catabolic process;5.16407862845771e-17!GO:0043632;modification-dependent macromolecule catabolic process;5.16407862845771e-17!GO:0044257;cellular protein catabolic process;7.99697579926008e-17!GO:0042623;ATPase activity, coupled;8.05796764622668e-17!GO:0006366;transcription from RNA polymerase II promoter;1.07041477866561e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.23590263878332e-16!GO:0044455;mitochondrial membrane part;2.19815635695044e-16!GO:0031980;mitochondrial lumen;3.23261618186953e-16!GO:0005759;mitochondrial matrix;3.23261618186953e-16!GO:0042254;ribosome biogenesis and assembly;4.04170176787602e-16!GO:0000278;mitotic cell cycle;6.1289195057217e-16!GO:0043412;biopolymer modification;9.40789966004606e-16!GO:0008135;translation factor activity, nucleic acid binding;1.13816315333189e-15!GO:0006260;DNA replication;2.04314186495691e-15!GO:0051082;unfolded protein binding;2.57974283197174e-15!GO:0016604;nuclear body;3.13298867491847e-15!GO:0009057;macromolecule catabolic process;6.123831415115e-15!GO:0044427;chromosomal part;6.44353033667457e-15!GO:0006605;protein targeting;1.01454956701736e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;1.58635198208938e-14!GO:0000375;RNA splicing, via transesterification reactions;1.58635198208938e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.58635198208938e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.65006519480802e-14!GO:0030163;protein catabolic process;1.78556567762823e-14!GO:0005635;nuclear envelope;2.50663434434844e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;2.99355333158001e-14!GO:0000502;proteasome complex (sensu Eukaryota);5.73417144469481e-14!GO:0005761;mitochondrial ribosome;5.73417144469481e-14!GO:0000313;organellar ribosome;5.73417144469481e-14!GO:0004386;helicase activity;6.18615480896414e-14!GO:0048770;pigment granule;8.16351753534653e-14!GO:0042470;melanosome;8.16351753534653e-14!GO:0044453;nuclear membrane part;8.85971290993858e-14!GO:0005746;mitochondrial respiratory chain;1.26160067091054e-13!GO:0031965;nuclear membrane;1.56801372076071e-13!GO:0006323;DNA packaging;1.62496315598736e-13!GO:0006464;protein modification process;1.65343689764027e-13!GO:0003712;transcription cofactor activity;1.65343689764027e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.18697088923413e-13!GO:0051301;cell division;2.29637335279028e-13!GO:0006913;nucleocytoplasmic transport;2.655782857022e-13!GO:0009719;response to endogenous stimulus;4.03167498558401e-13!GO:0051169;nuclear transport;5.25931921704834e-13!GO:0048193;Golgi vesicle transport;6.16657324712642e-13!GO:0008026;ATP-dependent helicase activity;6.26537583703505e-13!GO:0050136;NADH dehydrogenase (quinone) activity;7.60930555527703e-13!GO:0003954;NADH dehydrogenase activity;7.60930555527703e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.60930555527703e-13!GO:0016192;vesicle-mediated transport;9.31549490735446e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.12215316741464e-12!GO:0005643;nuclear pore;1.70422880896481e-12!GO:0051186;cofactor metabolic process;2.39420541523181e-12!GO:0043687;post-translational protein modification;3.38771259061863e-12!GO:0044248;cellular catabolic process;5.03067090882037e-12!GO:0005794;Golgi apparatus;7.58582712514709e-12!GO:0000087;M phase of mitotic cell cycle;9.15141161860661e-12!GO:0016607;nuclear speck;1.28352854247302e-11!GO:0007067;mitosis;1.93758645382692e-11!GO:0022403;cell cycle phase;1.93758645382692e-11!GO:0003743;translation initiation factor activity;2.8451285194471e-11!GO:0006403;RNA localization;2.8451285194471e-11!GO:0051726;regulation of cell cycle;3.07825547484281e-11!GO:0006399;tRNA metabolic process;3.59232761262979e-11!GO:0042775;organelle ATP synthesis coupled electron transport;3.81282836227422e-11!GO:0042773;ATP synthesis coupled electron transport;3.81282836227422e-11!GO:0050657;nucleic acid transport;3.8875958757308e-11!GO:0051236;establishment of RNA localization;3.8875958757308e-11!GO:0050658;RNA transport;3.8875958757308e-11!GO:0012501;programmed cell death;4.69839439163712e-11!GO:0000074;regulation of progression through cell cycle;5.55696448666963e-11!GO:0030964;NADH dehydrogenase complex (quinone);6.64749585214645e-11!GO:0045271;respiratory chain complex I;6.64749585214645e-11!GO:0005747;mitochondrial respiratory chain complex I;6.64749585214645e-11!GO:0016568;chromatin modification;6.79435575288192e-11!GO:0005783;endoplasmic reticulum;6.9993072806837e-11!GO:0006915;apoptosis;8.85739125507037e-11!GO:0044432;endoplasmic reticulum part;9.87837886210386e-11!GO:0006364;rRNA processing;1.11887784260629e-10!GO:0046930;pore complex;1.45666148977165e-10!GO:0006446;regulation of translational initiation;1.76063407575295e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.90840539382827e-10!GO:0050794;regulation of cellular process;2.47494205004853e-10!GO:0006413;translational initiation;3.1745084099214e-10!GO:0016072;rRNA metabolic process;3.30585048892091e-10!GO:0008219;cell death;4.21761139680662e-10!GO:0016265;death;4.21761139680662e-10!GO:0000785;chromatin;9.53606839518673e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.55682799168566e-10!GO:0006732;coenzyme metabolic process;9.7650307594432e-10!GO:0008639;small protein conjugating enzyme activity;1.11071597650469e-09!GO:0006461;protein complex assembly;1.38011761338941e-09!GO:0006333;chromatin assembly or disassembly;1.57402905852035e-09!GO:0017038;protein import;1.7218813646593e-09!GO:0000279;M phase;1.81268751628947e-09!GO:0048523;negative regulation of cellular process;1.87530100643378e-09!GO:0015630;microtubule cytoskeleton;1.87530100643378e-09!GO:0005793;ER-Golgi intermediate compartment;2.03920648261833e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.03920648261833e-09!GO:0004812;aminoacyl-tRNA ligase activity;2.03920648261833e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.03920648261833e-09!GO:0004842;ubiquitin-protein ligase activity;2.35615584729425e-09!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.22062774483741e-09!GO:0043038;amino acid activation;3.63579728395106e-09!GO:0006418;tRNA aminoacylation for protein translation;3.63579728395106e-09!GO:0043039;tRNA aminoacylation;3.63579728395106e-09!GO:0051028;mRNA transport;3.74081327927783e-09!GO:0065002;intracellular protein transport across a membrane;4.38042314130055e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.39286902406315e-09!GO:0005813;centrosome;5.00313502045809e-09!GO:0019787;small conjugating protein ligase activity;5.60298810871864e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.93786683483724e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.51461774408414e-08!GO:0016563;transcription activator activity;1.52438602064475e-08!GO:0005815;microtubule organizing center;1.72517694220948e-08!GO:0065004;protein-DNA complex assembly;1.7425620827748e-08!GO:0008565;protein transporter activity;1.88923236157818e-08!GO:0005768;endosome;2.88538924223122e-08!GO:0051246;regulation of protein metabolic process;2.88538924223122e-08!GO:0016881;acid-amino acid ligase activity;2.99181481903208e-08!GO:0005667;transcription factor complex;3.5237439752095e-08!GO:0043566;structure-specific DNA binding;3.80998365881527e-08!GO:0048519;negative regulation of biological process;4.45346057487241e-08!GO:0000245;spliceosome assembly;4.546279449225e-08!GO:0009259;ribonucleotide metabolic process;5.78185909380364e-08!GO:0006163;purine nucleotide metabolic process;6.53662981487235e-08!GO:0016740;transferase activity;7.60070326803854e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.49342938208241e-08!GO:0006261;DNA-dependent DNA replication;8.65430798146809e-08!GO:0051188;cofactor biosynthetic process;1.21013541296499e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.36673039365915e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.47991811610037e-07!GO:0006164;purine nucleotide biosynthetic process;1.47991811610037e-07!GO:0051170;nuclear import;1.5710545383459e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.57322901364382e-07!GO:0009055;electron carrier activity;1.98407306330381e-07!GO:0005789;endoplasmic reticulum membrane;2.13900074338515e-07!GO:0016564;transcription repressor activity;2.16197299157284e-07!GO:0009260;ribonucleotide biosynthetic process;2.1727285763297e-07!GO:0009150;purine ribonucleotide metabolic process;2.1727285763297e-07!GO:0003724;RNA helicase activity;2.68661685827783e-07!GO:0019829;cation-transporting ATPase activity;2.91083476979604e-07!GO:0016779;nucleotidyltransferase activity;2.92684723219513e-07!GO:0031324;negative regulation of cellular metabolic process;3.23146698493172e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.23854444253885e-07!GO:0006606;protein import into nucleus;4.31374319846324e-07!GO:0007005;mitochondrion organization and biogenesis;4.55154569936833e-07!GO:0009152;purine ribonucleotide biosynthetic process;4.90192121599421e-07!GO:0015986;ATP synthesis coupled proton transport;5.07072523001524e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.07072523001524e-07!GO:0032446;protein modification by small protein conjugation;5.27488366639916e-07!GO:0003713;transcription coactivator activity;5.29969198648146e-07!GO:0050789;regulation of biological process;7.70008959268023e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.87245512866429e-07!GO:0006888;ER to Golgi vesicle-mediated transport;9.87676015705895e-07!GO:0043067;regulation of programmed cell death;9.91796684748457e-07!GO:0009142;nucleoside triphosphate biosynthetic process;9.91796684748457e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.91796684748457e-07!GO:0003924;GTPase activity;1.09669773155799e-06!GO:0016481;negative regulation of transcription;1.10914643916003e-06!GO:0003697;single-stranded DNA binding;1.1219813394634e-06!GO:0003682;chromatin binding;1.18115442394014e-06!GO:0042981;regulation of apoptosis;1.203580321055e-06!GO:0009141;nucleoside triphosphate metabolic process;1.28428827522953e-06!GO:0043623;cellular protein complex assembly;1.29658699651736e-06!GO:0016567;protein ubiquitination;1.39052406424216e-06!GO:0019222;regulation of metabolic process;1.45529645020325e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.50138388322546e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.50138388322546e-06!GO:0016787;hydrolase activity;1.93719271364669e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.95935784021627e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.95935784021627e-06!GO:0006754;ATP biosynthetic process;2.71961990412909e-06!GO:0006753;nucleoside phosphate metabolic process;2.71961990412909e-06!GO:0003714;transcription corepressor activity;2.74335238171687e-06!GO:0046034;ATP metabolic process;2.81516934686927e-06!GO:0009108;coenzyme biosynthetic process;3.16622036384286e-06!GO:0009892;negative regulation of metabolic process;3.21295424529002e-06!GO:0015078;hydrogen ion transmembrane transporter activity;3.335206506551e-06!GO:0006793;phosphorus metabolic process;4.41370126596549e-06!GO:0006796;phosphate metabolic process;4.41370126596549e-06!GO:0009060;aerobic respiration;4.5448610607443e-06!GO:0000151;ubiquitin ligase complex;4.5801589898558e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.5801589898558e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.62116110299795e-06!GO:0009056;catabolic process;5.01573329266571e-06!GO:0003899;DNA-directed RNA polymerase activity;5.14493251129384e-06!GO:0051427;hormone receptor binding;5.68812614348047e-06!GO:0044431;Golgi apparatus part;5.9063633131836e-06!GO:0006752;group transfer coenzyme metabolic process;7.16029731709307e-06!GO:0005819;spindle;8.43034071848937e-06!GO:0016469;proton-transporting two-sector ATPase complex;9.29923062728508e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.00272217580024e-05!GO:0008186;RNA-dependent ATPase activity;1.03023380438304e-05!GO:0035257;nuclear hormone receptor binding;1.32548909873395e-05!GO:0045259;proton-transporting ATP synthase complex;1.3751012792882e-05!GO:0030120;vesicle coat;1.52175834211895e-05!GO:0030662;coated vesicle membrane;1.52175834211895e-05!GO:0005762;mitochondrial large ribosomal subunit;1.65571737007286e-05!GO:0000315;organellar large ribosomal subunit;1.65571737007286e-05!GO:0043069;negative regulation of programmed cell death;1.76572346481507e-05!GO:0044440;endosomal part;2.04085887538765e-05!GO:0010008;endosome membrane;2.04085887538765e-05!GO:0005769;early endosome;2.3069632943628e-05!GO:0008094;DNA-dependent ATPase activity;2.64803342049791e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.71122976952707e-05!GO:0019899;enzyme binding;2.83014894969653e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.92059241032641e-05!GO:0000314;organellar small ribosomal subunit;2.92290048726322e-05!GO:0005763;mitochondrial small ribosomal subunit;2.92290048726322e-05!GO:0005788;endoplasmic reticulum lumen;3.45283441390985e-05!GO:0004004;ATP-dependent RNA helicase activity;3.51212728766533e-05!GO:0006334;nucleosome assembly;3.635122656206e-05!GO:0051329;interphase of mitotic cell cycle;3.78753805836185e-05!GO:0031497;chromatin assembly;3.78753805836185e-05!GO:0043066;negative regulation of apoptosis;4.43566970058964e-05!GO:0006916;anti-apoptosis;4.76904224658904e-05!GO:0006402;mRNA catabolic process;4.87647156512197e-05!GO:0008654;phospholipid biosynthetic process;4.93732506121926e-05!GO:0051168;nuclear export;5.16259095914743e-05!GO:0005525;GTP binding;5.16931633296311e-05!GO:0000775;chromosome, pericentric region;5.1938194635567e-05!GO:0005657;replication fork;5.21713774701574e-05!GO:0045333;cellular respiration;5.58216888253233e-05!GO:0043021;ribonucleoprotein binding;5.74135684157819e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.80140285600949e-05!GO:0044452;nucleolar part;6.18208703265365e-05!GO:0045786;negative regulation of progression through cell cycle;6.20471647895254e-05!GO:0003690;double-stranded DNA binding;7.46827261345708e-05!GO:0016310;phosphorylation;7.89273673667145e-05!GO:0006613;cotranslational protein targeting to membrane;7.89273673667145e-05!GO:0051325;interphase;7.98917089467122e-05!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.13644987357365e-05!GO:0000139;Golgi membrane;8.92407956304982e-05!GO:0048475;coated membrane;8.92407956304982e-05!GO:0030117;membrane coat;8.92407956304982e-05!GO:0048522;positive regulation of cellular process;9.01759280968103e-05!GO:0031072;heat shock protein binding;9.42362052150763e-05!GO:0006099;tricarboxylic acid cycle;0.000123362062314065!GO:0046356;acetyl-CoA catabolic process;0.000123362062314065!GO:0009117;nucleotide metabolic process;0.000125872149320628!GO:0000075;cell cycle checkpoint;0.000132289059276476!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000137889405386199!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000142084159973788!GO:0004298;threonine endopeptidase activity;0.000145089824967525!GO:0045941;positive regulation of transcription;0.000171657029801781!GO:0048471;perinuclear region of cytoplasm;0.000199750331987442!GO:0031323;regulation of cellular metabolic process;0.000200610979469904!GO:0006084;acetyl-CoA metabolic process;0.000200706493550311!GO:0045893;positive regulation of transcription, DNA-dependent;0.000201437888040661!GO:0009109;coenzyme catabolic process;0.000222700325003824!GO:0007243;protein kinase cascade;0.000224790821655375!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00024564743251099!GO:0000049;tRNA binding;0.000250560284761585!GO:0005770;late endosome;0.000258576514348484!GO:0045045;secretory pathway;0.000281642448969692!GO:0051187;cofactor catabolic process;0.000288374701105723!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000291836936841737!GO:0016741;transferase activity, transferring one-carbon groups;0.000299463050774956!GO:0006401;RNA catabolic process;0.000303958296687309!GO:0007051;spindle organization and biogenesis;0.000308665701685593!GO:0051052;regulation of DNA metabolic process;0.000315392789303419!GO:0005048;signal sequence binding;0.000329130959174424!GO:0031988;membrane-bound vesicle;0.00033899733073985!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000352744273647733!GO:0015399;primary active transmembrane transporter activity;0.000352744273647733!GO:0016853;isomerase activity;0.000358702291714851!GO:0006350;transcription;0.000358702291714851!GO:0016023;cytoplasmic membrane-bound vesicle;0.000370752083487823!GO:0016363;nuclear matrix;0.000389749682246179!GO:0006383;transcription from RNA polymerase III promoter;0.000406705839139289!GO:0008168;methyltransferase activity;0.000422616983102186!GO:0003702;RNA polymerase II transcription factor activity;0.000426929679633241!GO:0031252;leading edge;0.000430664574787051!GO:0030880;RNA polymerase complex;0.000468871687439978!GO:0032561;guanyl ribonucleotide binding;0.000478421431995127!GO:0019001;guanyl nucleotide binding;0.000478421431995127!GO:0006302;double-strand break repair;0.000484821393144523!GO:0003729;mRNA binding;0.000530000236350187!GO:0016197;endosome transport;0.00054645085804198!GO:0000776;kinetochore;0.000564647758128838!GO:0007264;small GTPase mediated signal transduction;0.000662032153588347!GO:0005885;Arp2/3 protein complex;0.000674282185142654!GO:0065007;biological regulation;0.000676725167904135!GO:0065009;regulation of a molecular function;0.000683180635651377!GO:0045892;negative regulation of transcription, DNA-dependent;0.000698229130016721!GO:0008361;regulation of cell size;0.000769146204640425!GO:0006352;transcription initiation;0.000820930969236029!GO:0032508;DNA duplex unwinding;0.000832594250808972!GO:0032392;DNA geometric change;0.000832594250808972!GO:0042802;identical protein binding;0.000890696366482224!GO:0015631;tubulin binding;0.000893365002402424!GO:0051252;regulation of RNA metabolic process;0.000909077820495295!GO:0045454;cell redox homeostasis;0.000934220784178944!GO:0008033;tRNA processing;0.000946495819139634!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000974559918510438!GO:0008022;protein C-terminus binding;0.00103344263354688!GO:0030867;rough endoplasmic reticulum membrane;0.00114138844392884!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00120346744328862!GO:0000428;DNA-directed RNA polymerase complex;0.00120346744328862!GO:0006310;DNA recombination;0.00120382742934244!GO:0003678;DNA helicase activity;0.0012259881138126!GO:0016859;cis-trans isomerase activity;0.0012268316035744!GO:0051789;response to protein stimulus;0.0012268316035744!GO:0006986;response to unfolded protein;0.0012268316035744!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00124542392886466!GO:0043492;ATPase activity, coupled to movement of substances;0.0012480977351947!GO:0016272;prefoldin complex;0.00127650038150356!GO:0031982;vesicle;0.00127650038150356!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00129014710216897!GO:0008139;nuclear localization sequence binding;0.00129916145513718!GO:0000059;protein import into nucleus, docking;0.00136309800425876!GO:0005798;Golgi-associated vesicle;0.00136933048072995!GO:0005874;microtubule;0.00139098494002181!GO:0016049;cell growth;0.0014304546512186!GO:0004674;protein serine/threonine kinase activity;0.00146808607575519!GO:0006414;translational elongation;0.00152629858470313!GO:0001558;regulation of cell growth;0.00160300826058658!GO:0006284;base-excision repair;0.00160924404121256!GO:0031410;cytoplasmic vesicle;0.00167158585176672!GO:0008250;oligosaccharyl transferase complex;0.00168354490835927!GO:0004576;oligosaccharyl transferase activity;0.00178352347860142!GO:0006268;DNA unwinding during replication;0.00183497050256472!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0019002094376671!GO:0006405;RNA export from nucleus;0.00200418124121573!GO:0006338;chromatin remodeling;0.00204193399566461!GO:0003711;transcription elongation regulator activity;0.00205883149093794!GO:0051087;chaperone binding;0.00214149439287924!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00220892020810017!GO:0010468;regulation of gene expression;0.00230288170830343!GO:0006892;post-Golgi vesicle-mediated transport;0.00233032887229002!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00248658971049307!GO:0006839;mitochondrial transport;0.00256687136340807!GO:0046474;glycerophospholipid biosynthetic process;0.00261974205996538!GO:0003684;damaged DNA binding;0.00283550030915328!GO:0004527;exonuclease activity;0.00295125932600981!GO:0006091;generation of precursor metabolites and energy;0.00295125932600981!GO:0033116;ER-Golgi intermediate compartment membrane;0.00298261014351655!GO:0015980;energy derivation by oxidation of organic compounds;0.00302313879581337!GO:0003746;translation elongation factor activity;0.00307859338309027!GO:0046467;membrane lipid biosynthetic process;0.00309306919331259!GO:0043681;protein import into mitochondrion;0.00316213375911635!GO:0019843;rRNA binding;0.00318157460340533!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00332073761148587!GO:0046966;thyroid hormone receptor binding;0.00375067797816923!GO:0046983;protein dimerization activity;0.00379218980960977!GO:0043488;regulation of mRNA stability;0.00386269658344244!GO:0043487;regulation of RNA stability;0.00386269658344244!GO:0048487;beta-tubulin binding;0.00386269658344244!GO:0051101;regulation of DNA binding;0.00389729597656863!GO:0006818;hydrogen transport;0.00411854779638765!GO:0007088;regulation of mitosis;0.00424789880316741!GO:0016251;general RNA polymerase II transcription factor activity;0.00437977776410926!GO:0006626;protein targeting to mitochondrion;0.0045074592024027!GO:0005773;vacuole;0.0047269294952052!GO:0031901;early endosome membrane;0.00482145919601105!GO:0048500;signal recognition particle;0.00482145919601105!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00482145919601105!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00483869432018425!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00483869432018425!GO:0030521;androgen receptor signaling pathway;0.00485020820566358!GO:0035258;steroid hormone receptor binding;0.00485938517911987!GO:0015992;proton transport;0.0050219372952939!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00544599432800466!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00544599432800466!GO:0030132;clathrin coat of coated pit;0.00545578809414451!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00545578809414451!GO:0015002;heme-copper terminal oxidase activity;0.00545578809414451!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00545578809414451!GO:0004129;cytochrome-c oxidase activity;0.00545578809414451!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00551814589004707!GO:0048518;positive regulation of biological process;0.00554908826647544!GO:0007010;cytoskeleton organization and biogenesis;0.00569732701690644!GO:0009893;positive regulation of metabolic process;0.00570481538805074!GO:0000792;heterochromatin;0.00585467753861938!GO:0043284;biopolymer biosynthetic process;0.00590040565928105!GO:0009165;nucleotide biosynthetic process;0.00593233691734818!GO:0031968;organelle outer membrane;0.00594824766596697!GO:0019867;outer membrane;0.00601698775812244!GO:0006417;regulation of translation;0.00630436828288098!GO:0046489;phosphoinositide biosynthetic process;0.00646440269878511!GO:0018196;peptidyl-asparagine modification;0.00704498471328081!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00704498471328081!GO:0030176;integral to endoplasmic reticulum membrane;0.00714853406821596!GO:0043022;ribosome binding;0.00720089892859454!GO:0007030;Golgi organization and biogenesis;0.00729474560765331!GO:0017166;vinculin binding;0.00734927232956104!GO:0006607;NLS-bearing substrate import into nucleus;0.00744841829800145!GO:0006376;mRNA splice site selection;0.00748160576517721!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00748160576517721!GO:0040008;regulation of growth;0.00753285544318885!GO:0008632;apoptotic program;0.00757403379129858!GO:0006611;protein export from nucleus;0.00764692246147171!GO:0006275;regulation of DNA replication;0.00779264456479388!GO:0000922;spindle pole;0.00791154806889417!GO:0006612;protein targeting to membrane;0.00795357577207977!GO:0016044;membrane organization and biogenesis;0.00798651857524538!GO:0006289;nucleotide-excision repair;0.00807593218285366!GO:0008312;7S RNA binding;0.00815433141383533!GO:0043624;cellular protein complex disassembly;0.00842190885687895!GO:0005684;U2-dependent spliceosome;0.00850440671439247!GO:0008047;enzyme activator activity;0.00851533757066174!GO:0007059;chromosome segregation;0.00899841666781167!GO:0008234;cysteine-type peptidase activity;0.00909429022557253!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00917537575971091!GO:0008629;induction of apoptosis by intracellular signals;0.00934664192720659!GO:0005637;nuclear inner membrane;0.00935655267839814!GO:0040029;regulation of gene expression, epigenetic;0.00935655267839814!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00935655267839814!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00935655267839814!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00935655267839814!GO:0007052;mitotic spindle organization and biogenesis;0.00943762109229855!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00943762109229855!GO:0033673;negative regulation of kinase activity;0.00945669159549738!GO:0006469;negative regulation of protein kinase activity;0.00945669159549738!GO:0005741;mitochondrial outer membrane;0.0094760588385122!GO:0032940;secretion by cell;0.00952442947712588!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00961780373642135!GO:0000786;nucleosome;0.0097524883515315!GO:0006950;response to stress;0.00987903058928616!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00987903058928616!GO:0050662;coenzyme binding;0.00987903058928616!GO:0030658;transport vesicle membrane;0.0101425389176965!GO:0031625;ubiquitin protein ligase binding;0.0102783963588747!GO:0006497;protein amino acid lipidation;0.0105371715712219!GO:0008287;protein serine/threonine phosphatase complex;0.0109320224832858!GO:0007093;mitotic cell cycle checkpoint;0.0109694431303492!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0119397791403414!GO:0032774;RNA biosynthetic process;0.0120880841280025!GO:0030036;actin cytoskeleton organization and biogenesis;0.0125332356366462!GO:0007006;mitochondrial membrane organization and biogenesis;0.0127517723190761!GO:0031124;mRNA 3'-end processing;0.0131034007505643!GO:0022415;viral reproductive process;0.0133167038221854!GO:0006595;polyamine metabolic process;0.0134804628400637!GO:0031326;regulation of cellular biosynthetic process;0.0139671034099716!GO:0006891;intra-Golgi vesicle-mediated transport;0.0141009075412748!GO:0006351;transcription, DNA-dependent;0.0141367311516731!GO:0003725;double-stranded RNA binding;0.0143377411562801!GO:0000323;lytic vacuole;0.0145511937725225!GO:0005764;lysosome;0.0145511937725225!GO:0005832;chaperonin-containing T-complex;0.0145686189919604!GO:0048468;cell development;0.0146157641166775!GO:0032984;macromolecular complex disassembly;0.0147044974929139!GO:0022890;inorganic cation transmembrane transporter activity;0.0147947362402394!GO:0030134;ER to Golgi transport vesicle;0.0149268729988331!GO:0004532;exoribonuclease activity;0.0151109268688836!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0151109268688836!GO:0006270;DNA replication initiation;0.0152011061884217!GO:0007265;Ras protein signal transduction;0.0154523903323744!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0154523903323744!GO:0045047;protein targeting to ER;0.0154523903323744!GO:0030518;steroid hormone receptor signaling pathway;0.0154523903323744!GO:0032259;methylation;0.015495347217008!GO:0008017;microtubule binding;0.0156650282181966!GO:0009116;nucleoside metabolic process;0.0166720595458978!GO:0030660;Golgi-associated vesicle membrane;0.0166885403331439!GO:0000178;exosome (RNase complex);0.0169027503099983!GO:0019783;small conjugating protein-specific protease activity;0.0169686986764694!GO:0005905;coated pit;0.0169760475247223!GO:0050790;regulation of catalytic activity;0.0170373347132141!GO:0046822;regulation of nucleocytoplasmic transport;0.017476203192991!GO:0004722;protein serine/threonine phosphatase activity;0.0177179298954575!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0180718198337783!GO:0046483;heterocycle metabolic process;0.0180726795860664!GO:0031325;positive regulation of cellular metabolic process;0.0184286505332596!GO:0000910;cytokinesis;0.0184344691029231!GO:0042770;DNA damage response, signal transduction;0.0185117204184083!GO:0006354;RNA elongation;0.0185117204184083!GO:0043189;H4/H2A histone acetyltransferase complex;0.018582926364464!GO:0000123;histone acetyltransferase complex;0.018582926364464!GO:0051098;regulation of binding;0.0188227411676628!GO:0007004;telomere maintenance via telomerase;0.0190217465899173!GO:0006730;one-carbon compound metabolic process;0.0197675766049816!GO:0007017;microtubule-based process;0.0200747577909849!GO:0016791;phosphoric monoester hydrolase activity;0.0200747577909849!GO:0031123;RNA 3'-end processing;0.0202308004269774!GO:0051348;negative regulation of transferase activity;0.0205719787345227!GO:0048037;cofactor binding;0.0207909031581898!GO:0050681;androgen receptor binding;0.0210857623944884!GO:0043241;protein complex disassembly;0.0210857623944884!GO:0030127;COPII vesicle coat;0.0210857623944884!GO:0012507;ER to Golgi transport vesicle membrane;0.0210857623944884!GO:0005669;transcription factor TFIID complex;0.0212336742250057!GO:0043596;nuclear replication fork;0.021662252207884!GO:0000228;nuclear chromosome;0.0217100576149404!GO:0030118;clathrin coat;0.0217100576149404!GO:0044450;microtubule organizing center part;0.0217511859135324!GO:0009889;regulation of biosynthetic process;0.021806587832897!GO:0022406;membrane docking;0.0221471633004177!GO:0048278;vesicle docking;0.0221471633004177!GO:0005791;rough endoplasmic reticulum;0.0232736545511169!GO:0004843;ubiquitin-specific protease activity;0.0233293837353476!GO:0016311;dephosphorylation;0.0233421816262431!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0234112247429398!GO:0006458;'de novo' protein folding;0.0234112247429398!GO:0051084;'de novo' posttranslational protein folding;0.0234112247429398!GO:0030133;transport vesicle;0.0235686111904966!GO:0043414;biopolymer methylation;0.02399787753222!GO:0000725;recombinational repair;0.0240168294304434!GO:0000724;double-strand break repair via homologous recombination;0.0240168294304434!GO:0008538;proteasome activator activity;0.0242767656387881!GO:0005862;muscle thin filament tropomyosin;0.0245698324064129!GO:0007346;regulation of progression through mitotic cell cycle;0.0248133513774806!GO:0007040;lysosome organization and biogenesis;0.0248452071719385!GO:0043549;regulation of kinase activity;0.0249506885581796!GO:0032200;telomere organization and biogenesis;0.0251872329343426!GO:0000723;telomere maintenance;0.0251872329343426!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0255697988774716!GO:0006144;purine base metabolic process;0.0257420781095964!GO:0000082;G1/S transition of mitotic cell cycle;0.0258322832646726!GO:0005732;small nucleolar ribonucleoprotein complex;0.0262222656347516!GO:0051338;regulation of transferase activity;0.0263051099458406!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0263670534357964!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0263670534357964!GO:0031057;negative regulation of histone modification;0.0263940029993185!GO:0035067;negative regulation of histone acetylation;0.0263940029993185!GO:0030125;clathrin vesicle coat;0.0270694452521172!GO:0030665;clathrin coated vesicle membrane;0.0270694452521172!GO:0030027;lamellipodium;0.0271982079674846!GO:0008637;apoptotic mitochondrial changes;0.0273168064993395!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0274418848397585!GO:0042158;lipoprotein biosynthetic process;0.0275755608537391!GO:0008408;3'-5' exonuclease activity;0.027752781941529!GO:0004177;aminopeptidase activity;0.027752781941529!GO:0000118;histone deacetylase complex;0.0280342001311805!GO:0051287;NAD binding;0.0280342001311805!GO:0016301;kinase activity;0.028616967688203!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0288197952388413!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0297053438952226!GO:0008286;insulin receptor signaling pathway;0.0299789496692369!GO:0000209;protein polyubiquitination;0.0301713645079421!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0309632603298815!GO:0009451;RNA modification;0.031302602412905!GO:0005096;GTPase activator activity;0.032330285665318!GO:0016491;oxidoreductase activity;0.0324429992597016!GO:0005083;small GTPase regulator activity;0.0331204425046339!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.033767434295879!GO:0007242;intracellular signaling cascade;0.0340851816256298!GO:0050178;phenylpyruvate tautomerase activity;0.0341520915794663!GO:0004721;phosphoprotein phosphatase activity;0.0342235321874606!GO:0042393;histone binding;0.0345122578301058!GO:0016584;nucleosome positioning;0.0347163069423815!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0353476166767139!GO:0051053;negative regulation of DNA metabolic process;0.0353476166767139!GO:0035267;NuA4 histone acetyltransferase complex;0.0354307964669814!GO:0006506;GPI anchor biosynthetic process;0.0354307964669814!GO:0031371;ubiquitin conjugating enzyme complex;0.0357126416602285!GO:0030029;actin filament-based process;0.0359127746686785!GO:0004003;ATP-dependent DNA helicase activity;0.0362024081651477!GO:0006360;transcription from RNA polymerase I promoter;0.0362043580510777!GO:0005876;spindle microtubule;0.0363891989241328!GO:0030911;TPR domain binding;0.0370782768326062!GO:0006650;glycerophospholipid metabolic process;0.0377370750592457!GO:0048144;fibroblast proliferation;0.0381138135450327!GO:0048145;regulation of fibroblast proliferation;0.0381138135450327!GO:0006505;GPI anchor metabolic process;0.0384948437247137!GO:0006904;vesicle docking during exocytosis;0.0384948437247137!GO:0035035;histone acetyltransferase binding;0.0385217828524013!GO:0032906;transforming growth factor-beta2 production;0.038623491137802!GO:0032909;regulation of transforming growth factor-beta2 production;0.038623491137802!GO:0006984;ER-nuclear signaling pathway;0.038623491137802!GO:0007021;tubulin folding;0.0391827084471267!GO:0009303;rRNA transcription;0.0396778634403594!GO:0051539;4 iron, 4 sulfur cluster binding;0.0399961518727425!GO:0007050;cell cycle arrest;0.0418107809722037!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.041833743657403!GO:0045449;regulation of transcription;0.0419726456365446!GO:0030833;regulation of actin filament polymerization;0.0421996814502868!GO:0008276;protein methyltransferase activity;0.0429238538015509!GO:0016790;thiolester hydrolase activity;0.0430146698576377!GO:0009112;nucleobase metabolic process;0.0430833964475834!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.043242614796336!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0439681553830588!GO:0006520;amino acid metabolic process;0.0443498025768423!GO:0045792;negative regulation of cell size;0.0446580621296984!GO:0031902;late endosome membrane;0.0447914836589979!GO:0004680;casein kinase activity;0.0452609364965642!GO:0043407;negative regulation of MAP kinase activity;0.0452609364965642!GO:0009396;folic acid and derivative biosynthetic process;0.0453135744401694!GO:0030522;intracellular receptor-mediated signaling pathway;0.0461394975414688!GO:0006378;mRNA polyadenylation;0.0462596715275047!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0465213698884643!GO:0000175;3'-5'-exoribonuclease activity;0.0465213698884643!GO:0019904;protein domain specific binding;0.0465213698884643!GO:0005869;dynactin complex;0.0465651935801716!GO:0004518;nuclease activity;0.0465651935801716!GO:0006541;glutamine metabolic process;0.0466923501658476!GO:0031461;cullin-RING ubiquitin ligase complex;0.0471988175438308!GO:0004221;ubiquitin thiolesterase activity;0.0474222366015023!GO:0008092;cytoskeletal protein binding;0.0477168423692019!GO:0000287;magnesium ion binding;0.0480579705677953!GO:0043550;regulation of lipid kinase activity;0.0480579705677953!GO:0030659;cytoplasmic vesicle membrane;0.0488065918084032!GO:0000738;DNA catabolic process, exonucleolytic;0.0490514104493448!GO:0022411;cellular component disassembly;0.0498163803945588!GO:0047485;protein N-terminus binding;0.0498163803945588!GO:0004239;methionyl aminopeptidase activity;0.0498256557576281!GO:0045859;regulation of protein kinase activity;0.0498859733510842 | |||
|sample_id=10603 | |sample_id=10603 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 98: | ||
|sample_tissue=pancreas | |sample_tissue=pancreas | ||
|top_motifs=FOXQ1:2.34089613867;PAX8:1.59787344818;RORA:1.1750863936;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.16498918786;POU1F1:1.15258191936;RBPJ:0.980318502177;ONECUT1,2:0.893879372681;bHLH_family:0.854518545106;FOX{F1,F2,J1}:0.853841189314;PAX1,9:0.847008321051;POU6F1:0.814186854527;NANOG:0.812235474758;ALX1:0.802702673266;FOX{I1,J2}:0.793982633285;STAT5{A,B}:0.742904589309;FOXD3:0.677852369026;PDX1:0.673001845384;GLI1..3:0.583689877324;CEBPA,B_DDIT3:0.574381803696;ADNP_IRX_SIX_ZHX:0.550516944813;NFE2L2:0.53887873772;PAX4:0.521699869747;BPTF:0.519679540127;E2F1..5:0.513472482583;VSX1,2:0.503477906876;EGR1..3:0.485826514528;BREu{core}:0.47003553196;NFIX:0.46553159524;LEF1_TCF7_TCF7L1,2:0.46530344005;PRRX1,2:0.462234255831;RXR{A,B,G}:0.437950917335;FOS_FOS{B,L1}_JUN{B,D}:0.435207159563;HOX{A5,B5}:0.416474062662;OCT4_SOX2{dimer}:0.411644290463;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.411274541738;TFAP2B:0.399685550516;FOXA2:0.383718057002;TFAP2{A,C}:0.380030545049;NKX2-1,4:0.374352067433;SOX17:0.354619778225;POU5F1:0.346186328206;NR5A1,2:0.32167418885;LHX3,4:0.306539031687;ZNF423:0.293518239695;RXRA_VDR{dimer}:0.288790151858;ZNF143:0.287407623452;TLX1..3_NFIC{dimer}:0.27144178393;NR3C1:0.270910411902;NFE2:0.261996999376;ZFP161:0.261691202045;ZNF148:0.258096016323;NFIL3:0.253061010446;GATA6:0.248312837199;NR1H4:0.21859281061;HES1:0.214606974752;HOX{A6,A7,B6,B7}:0.205999564053;NRF1:0.204881423804;PITX1..3:0.195198132483;AHR_ARNT_ARNT2:0.190393239172;TBX4,5:0.181202340361;NR6A1:0.178623835529;XCPE1{core}:0.178623789224;BACH2:0.172432071215;ATF4:0.169445289223;PAX5:0.168295597228;TP53:0.166163388272;ELK1,4_GABP{A,B1}:0.1538063492;HNF4A_NR2F1,2:0.145938743441;HLF:0.130878303677;CUX2:0.128944749518;RFX1:0.125257692421;MYB:0.110035178189;EN1,2:0.106619214341;HNF1A:0.0919620213198;CDC5L:0.0909850614541;MYOD1:0.0853883731232;FOSL2:0.0623083828374;AIRE:0.0598319455756;ESR1:0.057554249649;NFKB1_REL_RELA:0.0228689771179;TFDP1:0.0216308020781;IRF7:0.00631240969645;NKX3-1:0.00413087198326;HIC1:-0.00474281735581;SNAI1..3:-0.00663945216411;IKZF2:-0.0111159557028;TEAD1:-0.0190512282886;PRDM1:-0.0268103543939;ZBTB16:-0.0335955952235;YY1:-0.0343723367453;PATZ1:-0.0392388422065;POU2F1..3:-0.0564594177945;FOXP1:-0.0642959228415;SOX5:-0.078065705041;REST:-0.0797420613352;SP1:-0.091286078729;PAX2:-0.096911285239;ETS1,2:-0.103084185274;T:-0.10824262657;ZEB1:-0.111216203428;TEF:-0.113044695391;TAL1_TCF{3,4,12}:-0.114040152911;GTF2I:-0.114043636264;PBX1:-0.118110608241;GTF2A1,2:-0.11834611812;SOX{8,9,10}:-0.123262049961;MED-1{core}:-0.131106005188;FOX{D1,D2}:-0.156419393762;HOXA9_MEIS1:-0.166209694785;ATF2:-0.181575124389;ELF1,2,4:-0.190227444917;ZBTB6:-0.191512535953;MTF1:-0.200885016895;PAX3,7:-0.22432905634;PPARG:-0.232298995395;AR:-0.240760612637;HOX{A4,D4}:-0.242975291751;MEF2{A,B,C,D}:-0.250335461883;NKX2-3_NKX2-5:-0.252604366258;SPIB:-0.255991621196;TFAP4:-0.260046090282;TFCP2:-0.27005707131;NFY{A,B,C}:-0.28085643803;NHLH1,2:-0.28966236094;LMO2:-0.293491225813;DMAP1_NCOR{1,2}_SMARC:-0.296511459401;XBP1:-0.306593713194;NKX2-2,8:-0.315569905143;POU3F1..4:-0.32002618054;GFI1:-0.32343351782;IKZF1:-0.339337619306;SOX2:-0.366435949595;HAND1,2:-0.383627501359;SPI1:-0.389218558972;RUNX1..3:-0.417241346798;ATF5_CREB3:-0.418126755128;NFATC1..3:-0.420550357761;GZF1:-0.436308391121;RREB1:-0.450365596384;FOXL1:-0.478078662164;RFX2..5_RFXANK_RFXAP:-0.47965212974;MAZ:-0.509744999444;EBF1:-0.521937188515;STAT2,4,6:-0.526045694555;JUN:-0.534903969287;SRF:-0.542026127418;CRX:-0.548871782053;TOPORS:-0.555017261684;SMAD1..7,9:-0.556027381403;FOXM1:-0.576970143904;ESRRA:-0.588305205972;CDX1,2,4:-0.594348920676;ZNF238:-0.60470432322;ZNF384:-0.643842713625;IRF1,2:-0.67779945029;HMGA1,2:-0.698387822357;PAX6:-0.704914359341;MYBL2:-0.718589193277;GFI1B:-0.722187983045;ZIC1..3:-0.724072820958;CREB1:-0.755586565961;SREBF1,2:-0.759486646018;FOXO1,3,4:-0.771266142245;UFEwm:-0.778742290307;HBP1_HMGB_SSRP1_UBTF:-0.791633096893;MZF1:-0.798953256309;ARID5B:-0.80644830762;NKX3-2:-0.822001240174;MTE{core}:-0.824878334534;EVI1:-0.840603426298;DBP:-0.89039736508;ALX4:-0.897272705494;HSF1,2:-0.907623779788;MYFfamily:-0.926375429678;NKX6-1,2:-0.955230450185;TBP:-0.956668940032;KLF4:-0.97593943271;NFE2L1:-0.979512269427;NANOG{mouse}:-1.00538708946;MAFB:-1.02483343386;GATA4:-1.04236944154;STAT1,3:-1.11104525963;FOXN1:-1.13367506383;SPZ1:-1.15550453389;TGIF1:-1.18489071858;FOXP3:-1.32255470604;TLX2:-1.34586539555;EP300:-1.365738399;HIF1A:-1.40803711443;HMX1:-1.43110334727;ATF6:-1.59154530508;GCM1,2:-1.67307935001 | |top_motifs=FOXQ1:2.34089613867;PAX8:1.59787344818;RORA:1.1750863936;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.16498918786;POU1F1:1.15258191936;RBPJ:0.980318502177;ONECUT1,2:0.893879372681;bHLH_family:0.854518545106;FOX{F1,F2,J1}:0.853841189314;PAX1,9:0.847008321051;POU6F1:0.814186854527;NANOG:0.812235474758;ALX1:0.802702673266;FOX{I1,J2}:0.793982633285;STAT5{A,B}:0.742904589309;FOXD3:0.677852369026;PDX1:0.673001845384;GLI1..3:0.583689877324;CEBPA,B_DDIT3:0.574381803696;ADNP_IRX_SIX_ZHX:0.550516944813;NFE2L2:0.53887873772;PAX4:0.521699869747;BPTF:0.519679540127;E2F1..5:0.513472482583;VSX1,2:0.503477906876;EGR1..3:0.485826514528;BREu{core}:0.47003553196;NFIX:0.46553159524;LEF1_TCF7_TCF7L1,2:0.46530344005;PRRX1,2:0.462234255831;RXR{A,B,G}:0.437950917335;FOS_FOS{B,L1}_JUN{B,D}:0.435207159563;HOX{A5,B5}:0.416474062662;OCT4_SOX2{dimer}:0.411644290463;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.411274541738;TFAP2B:0.399685550516;FOXA2:0.383718057002;TFAP2{A,C}:0.380030545049;NKX2-1,4:0.374352067433;SOX17:0.354619778225;POU5F1:0.346186328206;NR5A1,2:0.32167418885;LHX3,4:0.306539031687;ZNF423:0.293518239695;RXRA_VDR{dimer}:0.288790151858;ZNF143:0.287407623452;TLX1..3_NFIC{dimer}:0.27144178393;NR3C1:0.270910411902;NFE2:0.261996999376;ZFP161:0.261691202045;ZNF148:0.258096016323;NFIL3:0.253061010446;GATA6:0.248312837199;NR1H4:0.21859281061;HES1:0.214606974752;HOX{A6,A7,B6,B7}:0.205999564053;NRF1:0.204881423804;PITX1..3:0.195198132483;AHR_ARNT_ARNT2:0.190393239172;TBX4,5:0.181202340361;NR6A1:0.178623835529;XCPE1{core}:0.178623789224;BACH2:0.172432071215;ATF4:0.169445289223;PAX5:0.168295597228;TP53:0.166163388272;ELK1,4_GABP{A,B1}:0.1538063492;HNF4A_NR2F1,2:0.145938743441;HLF:0.130878303677;CUX2:0.128944749518;RFX1:0.125257692421;MYB:0.110035178189;EN1,2:0.106619214341;HNF1A:0.0919620213198;CDC5L:0.0909850614541;MYOD1:0.0853883731232;FOSL2:0.0623083828374;AIRE:0.0598319455756;ESR1:0.057554249649;NFKB1_REL_RELA:0.0228689771179;TFDP1:0.0216308020781;IRF7:0.00631240969645;NKX3-1:0.00413087198326;HIC1:-0.00474281735581;SNAI1..3:-0.00663945216411;IKZF2:-0.0111159557028;TEAD1:-0.0190512282886;PRDM1:-0.0268103543939;ZBTB16:-0.0335955952235;YY1:-0.0343723367453;PATZ1:-0.0392388422065;POU2F1..3:-0.0564594177945;FOXP1:-0.0642959228415;SOX5:-0.078065705041;REST:-0.0797420613352;SP1:-0.091286078729;PAX2:-0.096911285239;ETS1,2:-0.103084185274;T:-0.10824262657;ZEB1:-0.111216203428;TEF:-0.113044695391;TAL1_TCF{3,4,12}:-0.114040152911;GTF2I:-0.114043636264;PBX1:-0.118110608241;GTF2A1,2:-0.11834611812;SOX{8,9,10}:-0.123262049961;MED-1{core}:-0.131106005188;FOX{D1,D2}:-0.156419393762;HOXA9_MEIS1:-0.166209694785;ATF2:-0.181575124389;ELF1,2,4:-0.190227444917;ZBTB6:-0.191512535953;MTF1:-0.200885016895;PAX3,7:-0.22432905634;PPARG:-0.232298995395;AR:-0.240760612637;HOX{A4,D4}:-0.242975291751;MEF2{A,B,C,D}:-0.250335461883;NKX2-3_NKX2-5:-0.252604366258;SPIB:-0.255991621196;TFAP4:-0.260046090282;TFCP2:-0.27005707131;NFY{A,B,C}:-0.28085643803;NHLH1,2:-0.28966236094;LMO2:-0.293491225813;DMAP1_NCOR{1,2}_SMARC:-0.296511459401;XBP1:-0.306593713194;NKX2-2,8:-0.315569905143;POU3F1..4:-0.32002618054;GFI1:-0.32343351782;IKZF1:-0.339337619306;SOX2:-0.366435949595;HAND1,2:-0.383627501359;SPI1:-0.389218558972;RUNX1..3:-0.417241346798;ATF5_CREB3:-0.418126755128;NFATC1..3:-0.420550357761;GZF1:-0.436308391121;RREB1:-0.450365596384;FOXL1:-0.478078662164;RFX2..5_RFXANK_RFXAP:-0.47965212974;MAZ:-0.509744999444;EBF1:-0.521937188515;STAT2,4,6:-0.526045694555;JUN:-0.534903969287;SRF:-0.542026127418;CRX:-0.548871782053;TOPORS:-0.555017261684;SMAD1..7,9:-0.556027381403;FOXM1:-0.576970143904;ESRRA:-0.588305205972;CDX1,2,4:-0.594348920676;ZNF238:-0.60470432322;ZNF384:-0.643842713625;IRF1,2:-0.67779945029;HMGA1,2:-0.698387822357;PAX6:-0.704914359341;MYBL2:-0.718589193277;GFI1B:-0.722187983045;ZIC1..3:-0.724072820958;CREB1:-0.755586565961;SREBF1,2:-0.759486646018;FOXO1,3,4:-0.771266142245;UFEwm:-0.778742290307;HBP1_HMGB_SSRP1_UBTF:-0.791633096893;MZF1:-0.798953256309;ARID5B:-0.80644830762;NKX3-2:-0.822001240174;MTE{core}:-0.824878334534;EVI1:-0.840603426298;DBP:-0.89039736508;ALX4:-0.897272705494;HSF1,2:-0.907623779788;MYFfamily:-0.926375429678;NKX6-1,2:-0.955230450185;TBP:-0.956668940032;KLF4:-0.97593943271;NFE2L1:-0.979512269427;NANOG{mouse}:-1.00538708946;MAFB:-1.02483343386;GATA4:-1.04236944154;STAT1,3:-1.11104525963;FOXN1:-1.13367506383;SPZ1:-1.15550453389;TGIF1:-1.18489071858;FOXP3:-1.32255470604;TLX2:-1.34586539555;EP300:-1.365738399;HIF1A:-1.40803711443;HMX1:-1.43110334727;ATF6:-1.59154530508;GCM1,2:-1.67307935001 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10603-108E9;search_select_hide=table117:FF:10603-108E9 | |||
}} | }} | ||
Latest revision as of 14:30, 3 June 2020
| Name: | embryonic pancreas cell line:2C6 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11814 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11814
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11814
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.774 |
| 10 | 10 | 0.734 |
| 100 | 100 | 0.922 |
| 101 | 101 | 0.83 |
| 102 | 102 | 0.22 |
| 103 | 103 | 0.0712 |
| 104 | 104 | 0.604 |
| 105 | 105 | 0.0817 |
| 106 | 106 | 0.0446 |
| 107 | 107 | 0.476 |
| 108 | 108 | 0.765 |
| 109 | 109 | 0.011 |
| 11 | 11 | 0.999 |
| 110 | 110 | 0.184 |
| 111 | 111 | 0.0253 |
| 112 | 112 | 0.342 |
| 113 | 113 | 0.244 |
| 114 | 114 | 0.367 |
| 115 | 115 | 0.319 |
| 116 | 116 | 0.474 |
| 117 | 117 | 0.655 |
| 118 | 118 | 0.882 |
| 119 | 119 | 0.403 |
| 12 | 12 | 0.518 |
| 120 | 120 | 0.453 |
| 121 | 121 | 0.706 |
| 122 | 122 | 0.0216 |
| 123 | 123 | 0.304 |
| 124 | 124 | 0.53 |
| 125 | 125 | 0.775 |
| 126 | 126 | 0.982 |
| 127 | 127 | 0.975 |
| 128 | 128 | 0.699 |
| 129 | 129 | 0.239 |
| 13 | 13 | 0.0396 |
| 130 | 130 | 0.108 |
| 131 | 131 | 0.0669 |
| 132 | 132 | 0.627 |
| 133 | 133 | 0.0224 |
| 134 | 134 | 0.227 |
| 135 | 135 | 0.0508 |
| 136 | 136 | 0.924 |
| 137 | 137 | 0.586 |
| 138 | 138 | 0.705 |
| 139 | 139 | 0.0549 |
| 14 | 14 | 0.21 |
| 140 | 140 | 0.877 |
| 141 | 141 | 0.7 |
| 142 | 142 | 0.915 |
| 143 | 143 | 0.514 |
| 144 | 144 | 0.492 |
| 145 | 145 | 0.411 |
| 146 | 146 | 0.0786 |
| 147 | 147 | 0.2 |
| 148 | 148 | 0.256 |
| 149 | 149 | 0.66 |
| 15 | 15 | 0.0135 |
| 150 | 150 | 0.855 |
| 151 | 151 | 0.585 |
| 152 | 152 | 0.775 |
| 153 | 153 | 0.619 |
| 154 | 154 | 0.688 |
| 155 | 155 | 0.669 |
| 156 | 156 | 0.45 |
| 157 | 157 | 0.406 |
| 158 | 158 | 0.739 |
| 159 | 159 | 0.472 |
| 16 | 16 | 0.964 |
| 160 | 160 | 0.488 |
| 161 | 161 | 0.215 |
| 162 | 162 | 0.955 |
| 163 | 163 | 0.674 |
| 164 | 164 | 0.52 |
| 165 | 165 | 0.953 |
| 166 | 166 | 0.0884 |
| 167 | 167 | 0.41 |
| 168 | 168 | 0.819 |
| 169 | 169 | 0.985 |
| 17 | 17 | 0.177 |
| 18 | 18 | 0.486 |
| 19 | 19 | 0.117 |
| 2 | 2 | 0.871 |
| 20 | 20 | 0.114 |
| 21 | 21 | 0.654 |
| 22 | 22 | 0.319 |
| 23 | 23 | 0.655 |
| 24 | 24 | 0.581 |
| 25 | 25 | 0.477 |
| 26 | 26 | 0.627 |
| 27 | 27 | 0.498 |
| 28 | 28 | 0.245 |
| 29 | 29 | 0.801 |
| 3 | 3 | 0.684 |
| 30 | 30 | 0.823 |
| 31 | 31 | 0.6 |
| 32 | 32 | 0.00421 |
| 33 | 33 | 0.583 |
| 34 | 34 | 0.155 |
| 35 | 35 | 0.635 |
| 36 | 36 | 0.0707 |
| 37 | 37 | 0.204 |
| 38 | 38 | 0.0677 |
| 39 | 39 | 0.732 |
| 4 | 4 | 0.298 |
| 40 | 40 | 0.0393 |
| 41 | 41 | 0.32 |
| 42 | 42 | 0.103 |
| 43 | 43 | 0.633 |
| 44 | 44 | 0.0855 |
| 45 | 45 | 0.0841 |
| 46 | 46 | 0.956 |
| 47 | 47 | 0.866 |
| 48 | 48 | 0.991 |
| 49 | 49 | 0.148 |
| 5 | 5 | 0.471 |
| 50 | 50 | 0.317 |
| 51 | 51 | 0.275 |
| 52 | 52 | 0.369 |
| 53 | 53 | 0.729 |
| 54 | 54 | 0.159 |
| 55 | 55 | 0.254 |
| 56 | 56 | 0.261 |
| 57 | 57 | 0.0385 |
| 58 | 58 | 0.897 |
| 59 | 59 | 0.435 |
| 6 | 6 | 0.393 |
| 60 | 60 | 0.606 |
| 61 | 61 | 0.183 |
| 62 | 62 | 0.588 |
| 63 | 63 | 0.503 |
| 64 | 64 | 0.638 |
| 65 | 65 | 0.396 |
| 66 | 66 | 0.00831 |
| 67 | 67 | 0.693 |
| 68 | 68 | 0.76 |
| 69 | 69 | 0.772 |
| 7 | 7 | 0.212 |
| 70 | 70 | 0.136 |
| 71 | 71 | 0.36 |
| 72 | 72 | 0.455 |
| 73 | 73 | 0.639 |
| 74 | 74 | 0.711 |
| 75 | 75 | 0.68 |
| 76 | 76 | 0.356 |
| 77 | 77 | 0.677 |
| 78 | 78 | 0.804 |
| 79 | 79 | 0.049 |
| 8 | 8 | 0.631 |
| 80 | 80 | 0.241 |
| 81 | 81 | 0.0642 |
| 82 | 82 | 0.185 |
| 83 | 83 | 0.812 |
| 84 | 84 | 0.189 |
| 85 | 85 | 0.237 |
| 86 | 86 | 0.198 |
| 87 | 87 | 0.534 |
| 88 | 88 | 0.631 |
| 89 | 89 | 0.669 |
| 9 | 9 | 0.64 |
| 90 | 90 | 0.387 |
| 91 | 91 | 0.724 |
| 92 | 92 | 0.343 |
| 93 | 93 | 0.693 |
| 94 | 94 | 0.737 |
| 95 | 95 | 0.174 |
| 96 | 96 | 0.953 |
| 97 | 97 | 0.327 |
| 98 | 98 | 0.026 |
| 99 | 99 | 0.588 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11814
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100669 embryonic cell line sample
UBERON:0001264 pancreas
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0001264 (pancreas)
0002100 (trunk)
0000466 (immaterial anatomical entity)
0002075 (viscus)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002323 (body cavity)
0005177 (trunk region element)
0000464 (anatomical space)
0004458 (body cavity or lining)
0000949 (endocrine system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100669 (embryonic cell line sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
