FF:10730-110B1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00006019 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX007775;DRR008647;DRZ000072;DRZ001457;DRZ011422;DRZ012807 | ||
| | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002048,UBERON:0002100,UBERON:0000483,UBERON:0002384,UBERON:0000479,UBERON:0000064,UBERON:0004119,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0004802,UBERON:0000025,UBERON:0005911,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0009569,UBERON:0005178,UBERON:0000072,UBERON:0005177,UBERON:0004807,UBERON:0000117,UBERON:0000171,UBERON:0000115,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0000065,UBERON:0000170,UBERON:0001004,UBERON:0002224,UBERON:0000915 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0000066,CL:0002371,CL:0000082,CL:0000255,CL:0000057,CL:0002553 | |||
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:0050615,DOID:162,DOID:14566,DOID:0050687,DOID:1324,DOID:305,DOID:1115 | |||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0100353,FF:0100453,FF:0100400,FF:0101120,FF:0100460,FF:0100762,FF:0102553,FF:0103764 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line=FF:0100353,FF:0100400,FF:0100453,FF:0101120 | |fonse_cell_line=FF:0100353,FF:0100400,FF:0100453,FF:0101120 | ||
|fonse_cell_line_closure=FF:0100353,FF:0100400,FF:0100453,FF:0101120 | |fonse_cell_line_closure=FF:0100353,FF:0100400,FF:0100453,FF:0101120 | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.LQhCAGE/non-small%2520cell%2520lung%2520cancer%2520cell%2520line%253aNCI-H1385.CNhs12193.10730-110B1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.LQhCAGE/non-small%2520cell%2520lung%2520cancer%2520cell%2520line%253aNCI-H1385.CNhs12193.10730-110B1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.LQhCAGE/non-small%2520cell%2520lung%2520cancer%2520cell%2520line%253aNCI-H1385.CNhs12193.10730-110B1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.LQhCAGE/non-small%2520cell%2520lung%2520cancer%2520cell%2520line%253aNCI-H1385.CNhs12193.10730-110B1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.LQhCAGE/non-small%2520cell%2520lung%2520cancer%2520cell%2520line%253aNCI-H1385.CNhs12193.10730-110B1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10730-110B1 | |id=FF:10730-110B1 | ||
|is_a=CL:0002553;;EFO:0002091;;FF: | |is_a=CL:0002553;;EFO:0002091;;FF:0000210;;FF:0102553;;FF:0103764 | ||
|is_obsolete= | |||
|library_id=CNhs12193 | |||
|library_id_phase_based=2:CNhs12193 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10730 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10730 | |||
|name=non-small cell lung cancer cell line:NCI-H1385 | |name=non-small cell lung cancer cell line:NCI-H1385 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12193,LSID845,release010,COMPLETED | |profile_hcage=CNhs12193,LSID845,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=110 | |rna_box=110 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=1.57464 | |rna_weight_ug=1.57464 | ||
|sample_age=49 | |sample_age=49 | ||
|sample_category=cell lines | |||
|sample_cell_catalog=CRL-5867 | |sample_cell_catalog=CRL-5867 | ||
|sample_cell_line=NCI-H1385 | |sample_cell_line=NCI-H1385 | ||
| Line 69: | Line 91: | ||
|sample_ethnicity=B | |sample_ethnicity=B | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.72322988118889e-251!GO:0043226;organelle;5.11118987247851e-210!GO:0043229;intracellular organelle;3.00816135722952e-209!GO:0043227;membrane-bound organelle;2.30265878659896e-208!GO:0043231;intracellular membrane-bound organelle;2.30265878659896e-208!GO:0005737;cytoplasm;3.24311706490993e-172!GO:0044422;organelle part;9.42570129400566e-163!GO:0044446;intracellular organelle part;4.34664643069116e-161!GO:0044444;cytoplasmic part;5.41762278564785e-136!GO:0032991;macromolecular complex;6.91106461849105e-114!GO:0030529;ribonucleoprotein complex;5.15935539706413e-91!GO:0005739;mitochondrion;1.12775820952309e-88!GO:0044237;cellular metabolic process;5.11659530931505e-83!GO:0005634;nucleus;3.77928599248426e-80!GO:0044238;primary metabolic process;2.50457358994974e-77!GO:0044428;nuclear part;4.6105635382744e-74!GO:0043233;organelle lumen;1.19264629026081e-72!GO:0031974;membrane-enclosed lumen;1.19264629026081e-72!GO:0043170;macromolecule metabolic process;5.40817556691065e-69!GO:0003723;RNA binding;1.43699705008712e-67!GO:0044429;mitochondrial part;5.26103657275729e-62!GO:0043234;protein complex;1.2445269451686e-59!GO:0005840;ribosome;2.13400260014326e-56!GO:0031090;organelle membrane;3.67423918257268e-54!GO:0006396;RNA processing;2.02720348831638e-51!GO:0005515;protein binding;4.28798217170854e-51!GO:0031967;organelle envelope;2.18686224807367e-48!GO:0031975;envelope;5.70881785961357e-48!GO:0003735;structural constituent of ribosome;3.2522189907404e-47!GO:0006412;translation;3.26896806546383e-43!GO:0031981;nuclear lumen;5.74528089447988e-43!GO:0043283;biopolymer metabolic process;5.97190483376279e-43!GO:0016043;cellular component organization and biogenesis;4.15590156935712e-42!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.92897451983801e-42!GO:0033279;ribosomal subunit;7.59774009272826e-42!GO:0015031;protein transport;4.03367290612591e-41!GO:0033036;macromolecule localization;1.3693196762564e-40!GO:0010467;gene expression;2.34103201579657e-39!GO:0016071;mRNA metabolic process;1.18586237337114e-38!GO:0005740;mitochondrial envelope;1.55727864486437e-38!GO:0045184;establishment of protein localization;1.3921710136834e-37!GO:0044249;cellular biosynthetic process;2.25071274119729e-37!GO:0008104;protein localization;2.25071274119729e-37!GO:0008380;RNA splicing;4.01786139199574e-37!GO:0009058;biosynthetic process;5.61653372689126e-37!GO:0031966;mitochondrial membrane;6.57143291123899e-36!GO:0006397;mRNA processing;9.4897358768752e-36!GO:0043228;non-membrane-bound organelle;9.79761150594751e-36!GO:0043232;intracellular non-membrane-bound organelle;9.79761150594751e-36!GO:0006259;DNA metabolic process;1.61981514498668e-35!GO:0019538;protein metabolic process;8.1016538105281e-35!GO:0019866;organelle inner membrane;1.05469011879313e-34!GO:0006996;organelle organization and biogenesis;7.72033253225644e-34!GO:0044267;cellular protein metabolic process;3.73146928540784e-33!GO:0005743;mitochondrial inner membrane;1.01951367280367e-32!GO:0046907;intracellular transport;3.27314968906866e-32!GO:0005829;cytosol;4.10706710332995e-32!GO:0044260;cellular macromolecule metabolic process;5.94504349448835e-32!GO:0009059;macromolecule biosynthetic process;8.10656742935777e-32!GO:0006119;oxidative phosphorylation;2.68975113535384e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.81760572130734e-29!GO:0065003;macromolecular complex assembly;1.71676501434735e-28!GO:0044455;mitochondrial membrane part;5.58170997163937e-28!GO:0031980;mitochondrial lumen;3.56456112912494e-27!GO:0005759;mitochondrial matrix;3.56456112912494e-27!GO:0051649;establishment of cellular localization;2.03939848626086e-26!GO:0005681;spliceosome;3.37998585750963e-26!GO:0051641;cellular localization;4.58663274319088e-26!GO:0005654;nucleoplasm;6.70720357018422e-26!GO:0003676;nucleic acid binding;8.95242394302577e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.27084868268055e-25!GO:0006886;intracellular protein transport;6.80285553677858e-25!GO:0022607;cellular component assembly;9.82359288819087e-25!GO:0007049;cell cycle;2.25227590214573e-23!GO:0016462;pyrophosphatase activity;2.80888393986733e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.83564127132911e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;3.33432028102692e-23!GO:0006974;response to DNA damage stimulus;1.53985250207433e-22!GO:0015935;small ribosomal subunit;1.75077555808437e-22!GO:0017111;nucleoside-triphosphatase activity;2.10837946683697e-22!GO:0005694;chromosome;2.34270085694481e-22!GO:0005746;mitochondrial respiratory chain;3.49026748713949e-22!GO:0044445;cytosolic part;3.76973033963804e-22!GO:0000166;nucleotide binding;1.13559117055503e-21!GO:0044451;nucleoplasm part;6.85201410875789e-21!GO:0005761;mitochondrial ribosome;1.16383816448201e-20!GO:0000313;organellar ribosome;1.16383816448201e-20!GO:0015934;large ribosomal subunit;1.29859290326703e-20!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.79211398236864e-20!GO:0006457;protein folding;5.10631079478245e-20!GO:0044427;chromosomal part;5.75896978675139e-20!GO:0012505;endomembrane system;7.547666799199e-20!GO:0050136;NADH dehydrogenase (quinone) activity;1.19980913771003e-19!GO:0003954;NADH dehydrogenase activity;1.19980913771003e-19!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.19980913771003e-19!GO:0051276;chromosome organization and biogenesis;8.31069430486955e-19!GO:0006281;DNA repair;2.09453115344289e-18!GO:0016874;ligase activity;2.77362272759547e-18!GO:0042775;organelle ATP synthesis coupled electron transport;2.85491984078241e-18!GO:0042773;ATP synthesis coupled electron transport;2.85491984078241e-18!GO:0022402;cell cycle process;7.65823983307637e-18!GO:0006512;ubiquitin cycle;8.64953053856565e-18!GO:0051186;cofactor metabolic process;8.84280639282996e-18!GO:0030964;NADH dehydrogenase complex (quinone);1.48572214600569e-17!GO:0045271;respiratory chain complex I;1.48572214600569e-17!GO:0005747;mitochondrial respiratory chain complex I;1.48572214600569e-17!GO:0022618;protein-RNA complex assembly;1.64978816142208e-17!GO:0016070;RNA metabolic process;2.79106967599872e-17!GO:0000278;mitotic cell cycle;5.96781947683482e-17!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.96781947683482e-17!GO:0005730;nucleolus;6.53489123420412e-17!GO:0006325;establishment and/or maintenance of chromatin architecture;2.28237571573728e-16!GO:0016887;ATPase activity;6.5718818042233e-16!GO:0006323;DNA packaging;1.17579291249482e-15!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.19590568343621e-15!GO:0042623;ATPase activity, coupled;1.69551032089606e-15!GO:0000087;M phase of mitotic cell cycle;7.02430094238305e-15!GO:0032553;ribonucleotide binding;1.12468605953457e-14!GO:0032555;purine ribonucleotide binding;1.12468605953457e-14!GO:0007067;mitosis;1.53189054887067e-14!GO:0022403;cell cycle phase;1.59428393216078e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;2.87817453974707e-14!GO:0000375;RNA splicing, via transesterification reactions;2.87817453974707e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.87817453974707e-14!GO:0017076;purine nucleotide binding;3.64739580365162e-14!GO:0044265;cellular macromolecule catabolic process;3.90398975713366e-14!GO:0051082;unfolded protein binding;4.5881595745365e-14!GO:0006333;chromatin assembly or disassembly;5.41380067079818e-14!GO:0009055;electron carrier activity;6.26500518116239e-14!GO:0009719;response to endogenous stimulus;8.16203545086881e-14!GO:0000502;proteasome complex (sensu Eukaryota);8.49229870958169e-14!GO:0008135;translation factor activity, nucleic acid binding;9.35267826669112e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;9.78514562507565e-14!GO:0019941;modification-dependent protein catabolic process;1.57439195555601e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.57439195555601e-13!GO:0006732;coenzyme metabolic process;1.79220844497046e-13!GO:0051301;cell division;2.14244148076099e-13!GO:0006511;ubiquitin-dependent protein catabolic process;2.3360866252313e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.37990178101654e-13!GO:0044257;cellular protein catabolic process;2.67154514517356e-13!GO:0016192;vesicle-mediated transport;2.86405212028279e-13!GO:0000279;M phase;3.27178563730188e-13!GO:0005794;Golgi apparatus;3.50485144892963e-13!GO:0065004;protein-DNA complex assembly;5.5311646213677e-13!GO:0044248;cellular catabolic process;6.45581550054884e-13!GO:0006260;DNA replication;1.16809333482446e-12!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.58656613367718e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.15260031040648e-12!GO:0000785;chromatin;3.13068537667596e-12!GO:0031965;nuclear membrane;3.13068537667596e-12!GO:0015630;microtubule cytoskeleton;5.58029709678319e-12!GO:0042254;ribosome biogenesis and assembly;9.8012872930232e-12!GO:0032559;adenyl ribonucleotide binding;1.1233955937734e-11!GO:0016604;nuclear body;1.16758760611358e-11!GO:0006163;purine nucleotide metabolic process;1.16829448499381e-11!GO:0009259;ribonucleotide metabolic process;1.21502340582659e-11!GO:0005635;nuclear envelope;1.50829910610314e-11!GO:0009057;macromolecule catabolic process;1.64153356562748e-11!GO:0005524;ATP binding;1.74144500399961e-11!GO:0043412;biopolymer modification;2.99752000766079e-11!GO:0006605;protein targeting;3.20782664405456e-11!GO:0003743;translation initiation factor activity;3.60511809879437e-11!GO:0043285;biopolymer catabolic process;3.92222109391023e-11!GO:0019829;cation-transporting ATPase activity;4.24354583469783e-11!GO:0006334;nucleosome assembly;4.53372447698122e-11!GO:0030554;adenyl nucleotide binding;4.75751742706193e-11!GO:0008134;transcription factor binding;5.07565603322029e-11!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.08002074679523e-11!GO:0048770;pigment granule;5.3965185747871e-11!GO:0042470;melanosome;5.3965185747871e-11!GO:0044453;nuclear membrane part;6.43874063962174e-11!GO:0009150;purine ribonucleotide metabolic process;7.58817638002965e-11!GO:0006164;purine nucleotide biosynthetic process;7.83617890451256e-11!GO:0009141;nucleoside triphosphate metabolic process;1.4169825513248e-10!GO:0006413;translational initiation;1.47645806109138e-10!GO:0009199;ribonucleoside triphosphate metabolic process;1.61594573227042e-10!GO:0008565;protein transporter activity;1.84845911061788e-10!GO:0006399;tRNA metabolic process;1.87593380809859e-10!GO:0031497;chromatin assembly;1.96249516838268e-10!GO:0015986;ATP synthesis coupled proton transport;2.83598592813311e-10!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.83598592813311e-10!GO:0009260;ribonucleotide biosynthetic process;3.12612140866102e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.12963195249627e-10!GO:0009144;purine nucleoside triphosphate metabolic process;3.12963195249627e-10!GO:0045333;cellular respiration;3.3857800034895e-10!GO:0030163;protein catabolic process;4.12830019175701e-10!GO:0009142;nucleoside triphosphate biosynthetic process;5.04284214196836e-10!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.04284214196836e-10!GO:0004386;helicase activity;5.08506719063553e-10!GO:0009152;purine ribonucleotide biosynthetic process;5.14180782148348e-10!GO:0005643;nuclear pore;5.73525262539575e-10!GO:0008639;small protein conjugating enzyme activity;7.55016579836732e-10!GO:0048193;Golgi vesicle transport;8.52578372860832e-10!GO:0006446;regulation of translational initiation;9.44945878948403e-10!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.88832919299359e-10!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.88832919299359e-10!GO:0006464;protein modification process;1.0321994037764e-09!GO:0009060;aerobic respiration;1.12606829224478e-09!GO:0008026;ATP-dependent helicase activity;1.12773012301396e-09!GO:0015078;hydrogen ion transmembrane transporter activity;1.2203219522272e-09!GO:0051188;cofactor biosynthetic process;1.2427280318545e-09!GO:0004842;ubiquitin-protein ligase activity;1.36003775116415e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.70000025467086e-09!GO:0005783;endoplasmic reticulum;2.00760041141279e-09!GO:0046034;ATP metabolic process;2.0583998788351e-09!GO:0016568;chromatin modification;2.24126765991572e-09!GO:0016607;nuclear speck;2.32858285463107e-09!GO:0007005;mitochondrion organization and biogenesis;3.08351255963418e-09!GO:0031982;vesicle;3.24378511024976e-09!GO:0030532;small nuclear ribonucleoprotein complex;4.51852254187556e-09!GO:0006754;ATP biosynthetic process;5.0557254839818e-09!GO:0006753;nucleoside phosphate metabolic process;5.0557254839818e-09!GO:0044432;endoplasmic reticulum part;5.96794426531711e-09!GO:0019787;small conjugating protein ligase activity;5.96794426531711e-09!GO:0031988;membrane-bound vesicle;6.27567340436315e-09!GO:0031410;cytoplasmic vesicle;7.10226805966345e-09!GO:0043687;post-translational protein modification;7.91029576101373e-09!GO:0065002;intracellular protein transport across a membrane;9.29133866500901e-09!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.43774763647618e-09!GO:0043566;structure-specific DNA binding;9.89691874134232e-09!GO:0016023;cytoplasmic membrane-bound vesicle;1.09058416089898e-08!GO:0006403;RNA localization;1.45236764429232e-08!GO:0050657;nucleic acid transport;1.51577979433939e-08!GO:0051236;establishment of RNA localization;1.51577979433939e-08!GO:0050658;RNA transport;1.51577979433939e-08!GO:0006364;rRNA processing;1.70985737930878e-08!GO:0016072;rRNA metabolic process;1.93726825165223e-08!GO:0000775;chromosome, pericentric region;2.78008920310525e-08!GO:0016469;proton-transporting two-sector ATPase complex;3.05292498267589e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.42966045042538e-08!GO:0046930;pore complex;3.93919097280165e-08!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.50863255806111e-08!GO:0016881;acid-amino acid ligase activity;4.72849855703626e-08!GO:0032446;protein modification by small protein conjugation;7.75577407328024e-08!GO:0005789;endoplasmic reticulum membrane;9.49849748379722e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.5868491939661e-08!GO:0000314;organellar small ribosomal subunit;1.21783296792021e-07!GO:0005763;mitochondrial small ribosomal subunit;1.21783296792021e-07!GO:0006913;nucleocytoplasmic transport;1.31717640773074e-07!GO:0003697;single-stranded DNA binding;1.48937810172215e-07!GO:0045259;proton-transporting ATP synthase complex;1.50322745296233e-07!GO:0006099;tricarboxylic acid cycle;1.5392958385e-07!GO:0046356;acetyl-CoA catabolic process;1.5392958385e-07!GO:0016567;protein ubiquitination;1.6484674748635e-07!GO:0005762;mitochondrial large ribosomal subunit;1.89043204920923e-07!GO:0000315;organellar large ribosomal subunit;1.89043204920923e-07!GO:0005874;microtubule;2.00257939002409e-07!GO:0006084;acetyl-CoA metabolic process;2.08842760008245e-07!GO:0051726;regulation of cell cycle;2.53025921164893e-07!GO:0051169;nuclear transport;2.53631373374097e-07!GO:0000245;spliceosome assembly;2.59727227581914e-07!GO:0000074;regulation of progression through cell cycle;2.6840938391152e-07!GO:0044431;Golgi apparatus part;2.73774453496152e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.80184454555787e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.86586140851923e-07!GO:0004812;aminoacyl-tRNA ligase activity;2.86586140851923e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.86586140851923e-07!GO:0009108;coenzyme biosynthetic process;3.19322719669776e-07!GO:0043038;amino acid activation;4.6342703706921e-07!GO:0006418;tRNA aminoacylation for protein translation;4.6342703706921e-07!GO:0043039;tRNA aminoacylation;4.6342703706921e-07!GO:0016491;oxidoreductase activity;5.84626082392791e-07!GO:0009117;nucleotide metabolic process;7.02116485014289e-07!GO:0051028;mRNA transport;7.40945595831471e-07!GO:0005819;spindle;1.04348755553224e-06!GO:0051187;cofactor catabolic process;1.08213618848795e-06!GO:0003712;transcription cofactor activity;1.10682932039441e-06!GO:0006261;DNA-dependent DNA replication;1.16039325381487e-06!GO:0003899;DNA-directed RNA polymerase activity;1.24305942761842e-06!GO:0009109;coenzyme catabolic process;1.29677076923517e-06!GO:0005768;endosome;1.35859474289543e-06!GO:0009056;catabolic process;1.58212792883038e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.64935377859842e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.85143197712196e-06!GO:0015399;primary active transmembrane transporter activity;1.85143197712196e-06!GO:0006752;group transfer coenzyme metabolic process;1.87337522127904e-06!GO:0045045;secretory pathway;2.36997779829882e-06!GO:0016779;nucleotidyltransferase activity;3.11600548095777e-06!GO:0048475;coated membrane;3.70384641606919e-06!GO:0030117;membrane coat;3.70384641606919e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.82844822525709e-06!GO:0043623;cellular protein complex assembly;5.70358756333873e-06!GO:0000786;nucleosome;6.58122228904443e-06!GO:0000139;Golgi membrane;7.52761170081821e-06!GO:0044440;endosomal part;8.50091934437232e-06!GO:0010008;endosome membrane;8.50091934437232e-06!GO:0005793;ER-Golgi intermediate compartment;1.11120417194942e-05!GO:0006613;cotranslational protein targeting to membrane;1.14736867747963e-05!GO:0017038;protein import;1.18053309178152e-05!GO:0015631;tubulin binding;1.27438214711216e-05!GO:0006366;transcription from RNA polymerase II promoter;1.57677848257412e-05!GO:0000151;ubiquitin ligase complex;1.65904062897904e-05!GO:0005770;late endosome;1.71797540445926e-05!GO:0006091;generation of precursor metabolites and energy;1.82386271212267e-05!GO:0007017;microtubule-based process;1.97329454732919e-05!GO:0016740;transferase activity;1.99697422792371e-05!GO:0016787;hydrolase activity;2.00136416570413e-05!GO:0030120;vesicle coat;2.38689335399885e-05!GO:0030662;coated vesicle membrane;2.38689335399885e-05!GO:0003924;GTPase activity;2.43419109394273e-05!GO:0006461;protein complex assembly;2.78506589851949e-05!GO:0045454;cell redox homeostasis;2.84361454786133e-05!GO:0006793;phosphorus metabolic process;3.2452531837546e-05!GO:0006796;phosphate metabolic process;3.2452531837546e-05!GO:0005813;centrosome;3.39563052339591e-05!GO:0008654;phospholipid biosynthetic process;3.51602981780225e-05!GO:0008094;DNA-dependent ATPase activity;3.58312596102658e-05!GO:0043021;ribonucleoprotein binding;3.771661705453e-05!GO:0007051;spindle organization and biogenesis;3.79315818085739e-05!GO:0006818;hydrogen transport;3.89902390250174e-05!GO:0000776;kinetochore;4.41828006158654e-05!GO:0048471;perinuclear region of cytoplasm;4.59100515130967e-05!GO:0003724;RNA helicase activity;4.65669264494579e-05!GO:0051168;nuclear export;4.92450326091349e-05!GO:0015992;proton transport;5.01191243583782e-05!GO:0022890;inorganic cation transmembrane transporter activity;5.33008693930069e-05!GO:0043681;protein import into mitochondrion;5.53750413942847e-05!GO:0043492;ATPase activity, coupled to movement of substances;5.93217060169086e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;6.07650240975494e-05!GO:0005815;microtubule organizing center;6.51813726787377e-05!GO:0005905;coated pit;6.67921554075282e-05!GO:0005753;mitochondrial proton-transporting ATP synthase complex;6.95123788704764e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;7.19555418556054e-05!GO:0031072;heat shock protein binding;7.45338799743001e-05!GO:0006888;ER to Golgi vesicle-mediated transport;8.33622718879344e-05!GO:0005525;GTP binding;0.000116919726140334!GO:0051427;hormone receptor binding;0.000116919726140334!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000118701132231753!GO:0016853;isomerase activity;0.00012873253200658!GO:0003684;damaged DNA binding;0.00012926579057653!GO:0006383;transcription from RNA polymerase III promoter;0.000141888465743075!GO:0006839;mitochondrial transport;0.000150395081163787!GO:0030880;RNA polymerase complex;0.000166872782979899!GO:0005657;replication fork;0.000168805036745165!GO:0008033;tRNA processing;0.000170307935726741!GO:0005839;proteasome core complex (sensu Eukaryota);0.000171687087954745!GO:0046474;glycerophospholipid biosynthetic process;0.000182327710349491!GO:0030135;coated vesicle;0.000197353627256346!GO:0012501;programmed cell death;0.000201799045101748!GO:0003682;chromatin binding;0.000208389752848159!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000211620532268018!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.000215526879617626!GO:0015002;heme-copper terminal oxidase activity;0.000215526879617626!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.000215526879617626!GO:0004129;cytochrome-c oxidase activity;0.000215526879617626!GO:0006302;double-strand break repair;0.000225109817951239!GO:0006626;protein targeting to mitochondrion;0.000238489980515462!GO:0035257;nuclear hormone receptor binding;0.000239838525161438!GO:0005741;mitochondrial outer membrane;0.000280645904868169!GO:0005798;Golgi-associated vesicle;0.000288423804262!GO:0009165;nucleotide biosynthetic process;0.000307138021751248!GO:0003690;double-stranded DNA binding;0.000321960999163521!GO:0003729;mRNA binding;0.000326652553735461!GO:0016363;nuclear matrix;0.00033720203842376!GO:0006915;apoptosis;0.000343160615519521!GO:0015980;energy derivation by oxidation of organic compounds;0.000349510966966517!GO:0051540;metal cluster binding;0.000377014799272339!GO:0051536;iron-sulfur cluster binding;0.000377014799272339!GO:0046489;phosphoinositide biosynthetic process;0.000392820517804621!GO:0005667;transcription factor complex;0.000419311197128145!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000430633174124973!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000436339182693526!GO:0000428;DNA-directed RNA polymerase complex;0.000436339182693526!GO:0032940;secretion by cell;0.000439378178887725!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000465963803390182!GO:0007006;mitochondrial membrane organization and biogenesis;0.000466647512222021!GO:0004576;oligosaccharyl transferase activity;0.000469042240299036!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000475531310999826!GO:0031968;organelle outer membrane;0.000478754196801278!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.000529387362985701!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.000529387362985701!GO:0016564;transcription repressor activity;0.000529387362985701!GO:0006612;protein targeting to membrane;0.00055644654197674!GO:0008250;oligosaccharyl transferase complex;0.000562591215087893!GO:0008017;microtubule binding;0.000562591215087893!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000562591215087893!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000562591215087893!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000562591215087893!GO:0008186;RNA-dependent ATPase activity;0.000574123617956681!GO:0019867;outer membrane;0.000584764915221743!GO:0051920;peroxiredoxin activity;0.000585882681839571!GO:0004298;threonine endopeptidase activity;0.000622819457524316!GO:0030118;clathrin coat;0.000688928267721181!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000713865669747389!GO:0032561;guanyl ribonucleotide binding;0.000716498829841517!GO:0019001;guanyl nucleotide binding;0.000716498829841517!GO:0051329;interphase of mitotic cell cycle;0.0007252170635331!GO:0005773;vacuole;0.000739957116038491!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000766384579527677!GO:0046467;membrane lipid biosynthetic process;0.000791072921466255!GO:0051087;chaperone binding;0.00079657100688579!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000808800517206301!GO:0051287;NAD binding;0.000832316119792427!GO:0008219;cell death;0.000832790311861261!GO:0016265;death;0.000832790311861261!GO:0048487;beta-tubulin binding;0.000834675333304487!GO:0006310;DNA recombination;0.000849440723520239!GO:0008168;methyltransferase activity;0.000919588674073216!GO:0016859;cis-trans isomerase activity;0.000953646744609271!GO:0008287;protein serine/threonine phosphatase complex;0.000963491997625973!GO:0016251;general RNA polymerase II transcription factor activity;0.000967649480179584!GO:0009892;negative regulation of metabolic process;0.000975766670965262!GO:0031324;negative regulation of cellular metabolic process;0.000978518155677481!GO:0031902;late endosome membrane;0.00100284944825371!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00100379790294956!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00101715818854356!GO:0005885;Arp2/3 protein complex;0.00102918831904107!GO:0003714;transcription corepressor activity;0.00107829822205319!GO:0016310;phosphorylation;0.00119703719651448!GO:0008180;signalosome;0.00121530745976482!GO:0048500;signal recognition particle;0.00123702784780657!GO:0044452;nucleolar part;0.00125918928780445!GO:0003678;DNA helicase activity;0.00126866165854603!GO:0051325;interphase;0.00131665081297831!GO:0000059;protein import into nucleus, docking;0.00131750198522482!GO:0016741;transferase activity, transferring one-carbon groups;0.0013319853450278!GO:0004004;ATP-dependent RNA helicase activity;0.00143829627075387!GO:0030867;rough endoplasmic reticulum membrane;0.00143829627075387!GO:0005684;U2-dependent spliceosome;0.00151223121976603!GO:0016126;sterol biosynthetic process;0.00159705346799984!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00160465848592033!GO:0006414;translational elongation;0.00162310164967302!GO:0000075;cell cycle checkpoint;0.00162821216124848!GO:0051246;regulation of protein metabolic process;0.00178338651621306!GO:0050662;coenzyme binding;0.00184541212283992!GO:0019752;carboxylic acid metabolic process;0.00187825992328006!GO:0005876;spindle microtubule;0.00193472569031032!GO:0051789;response to protein stimulus;0.00203243158499133!GO:0006986;response to unfolded protein;0.00203243158499133!GO:0018196;peptidyl-asparagine modification;0.00212303557479048!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00212303557479048!GO:0008312;7S RNA binding;0.00217103290946152!GO:0007059;chromosome segregation;0.00223063630288738!GO:0005758;mitochondrial intermembrane space;0.00223619831568255!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00223804471084825!GO:0006082;organic acid metabolic process;0.00242878961948778!GO:0006611;protein export from nucleus;0.00247939055456479!GO:0033116;ER-Golgi intermediate compartment membrane;0.00252266472025456!GO:0006405;RNA export from nucleus;0.00253765524167405!GO:0043069;negative regulation of programmed cell death;0.00280468356486738!GO:0009116;nucleoside metabolic process;0.00292273486835261!GO:0006505;GPI anchor metabolic process;0.00292547590828284!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00307740911946962!GO:0006891;intra-Golgi vesicle-mediated transport;0.0031314421375528!GO:0031970;organelle envelope lumen;0.00326451871408754!GO:0006506;GPI anchor biosynthetic process;0.00326451871408754!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00332703065958039!GO:0045047;protein targeting to ER;0.00332703065958039!GO:0006778;porphyrin metabolic process;0.00341931208464812!GO:0033013;tetrapyrrole metabolic process;0.00341931208464812!GO:0006606;protein import into nucleus;0.00343485284082176!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00354184595676104!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00354889394502582!GO:0003711;transcription elongation regulator activity;0.00357147591019421!GO:0051539;4 iron, 4 sulfur cluster binding;0.00369018343500437!GO:0005875;microtubule associated complex;0.00369018343500437!GO:0008610;lipid biosynthetic process;0.00371319330220463!GO:0005048;signal sequence binding;0.00396615092914031!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00402641684152465!GO:0051170;nuclear import;0.00403216693102021!GO:0044433;cytoplasmic vesicle part;0.00412816228288435!GO:0003713;transcription coactivator activity;0.00423052345032735!GO:0006352;transcription initiation;0.00438162527278916!GO:0051052;regulation of DNA metabolic process;0.00438162527278916!GO:0012506;vesicle membrane;0.0044028228529053!GO:0048523;negative regulation of cellular process;0.00474783497233875!GO:0022406;membrane docking;0.00478096745647092!GO:0048278;vesicle docking;0.00478096745647092!GO:0005869;dynactin complex;0.00478096745647092!GO:0045786;negative regulation of progression through cell cycle;0.00493689856850236!GO:0032508;DNA duplex unwinding;0.00496732276111168!GO:0032392;DNA geometric change;0.00496732276111168!GO:0016481;negative regulation of transcription;0.00498425549202527!GO:0006007;glucose catabolic process;0.00508012992173328!GO:0006338;chromatin remodeling;0.00513234898174383!GO:0030176;integral to endoplasmic reticulum membrane;0.00514545335958103!GO:0030133;transport vesicle;0.00514545335958103!GO:0035258;steroid hormone receptor binding;0.00522517647605161!GO:0006779;porphyrin biosynthetic process;0.00544139931367483!GO:0033014;tetrapyrrole biosynthetic process;0.00544139931367483!GO:0043066;negative regulation of apoptosis;0.00567180415336714!GO:0006695;cholesterol biosynthetic process;0.00575963093700079!GO:0030503;regulation of cell redox homeostasis;0.00592427372722557!GO:0004860;protein kinase inhibitor activity;0.00597742952782844!GO:0000323;lytic vacuole;0.00624001140842867!GO:0005764;lysosome;0.00624001140842867!GO:0008022;protein C-terminus binding;0.00624458070816862!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0063834887033668!GO:0005637;nuclear inner membrane;0.00645565464828478!GO:0006284;base-excision repair;0.00658236497798367!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00670005419484635!GO:0016311;dephosphorylation;0.00679433870569621!GO:0030521;androgen receptor signaling pathway;0.00701169453628681!GO:0006904;vesicle docking during exocytosis;0.00718703471675503!GO:0046483;heterocycle metabolic process;0.00730296556116428!GO:0006916;anti-apoptosis;0.00740933808022797!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00755362811493959!GO:0019222;regulation of metabolic process;0.00756160339559179!GO:0016272;prefoldin complex;0.00759103018772705!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0077211059855307!GO:0004527;exonuclease activity;0.0082419225303122!GO:0019887;protein kinase regulator activity;0.00842085392539244!GO:0043433;negative regulation of transcription factor activity;0.00852891788555615!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.00877530616446499!GO:0043130;ubiquitin binding;0.00910517456324226!GO:0032182;small conjugating protein binding;0.00910517456324226!GO:0007010;cytoskeleton organization and biogenesis;0.00945319285053547!GO:0047006;20-alpha-hydroxysteroid dehydrogenase activity;0.00946407482621561!GO:0030125;clathrin vesicle coat;0.00954611090301652!GO:0030665;clathrin coated vesicle membrane;0.00954611090301652!GO:0006118;electron transport;0.0096785178401857!GO:0006268;DNA unwinding during replication;0.00977223948926406!GO:0000096;sulfur amino acid metabolic process;0.00982113697423789!GO:0030659;cytoplasmic vesicle membrane;0.010262236600126!GO:0008601;protein phosphatase type 2A regulator activity;0.0102883979511471!GO:0016615;malate dehydrogenase activity;0.0104199494202574!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0104633104251955!GO:0030137;COPI-coated vesicle;0.010464577797593!GO:0005832;chaperonin-containing T-complex;0.010464577797593!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0105191003600828!GO:0007052;mitotic spindle organization and biogenesis;0.0105208802775041!GO:0042802;identical protein binding;0.0105524316844229!GO:0031716;calcitonin receptor binding;0.0105939172726503!GO:0001984;vasodilation of artery during baroreceptor response to increased systemic arterial blood pressure;0.0105939172726503!GO:0008637;apoptotic mitochondrial changes;0.0106288514805763!GO:0030384;phosphoinositide metabolic process;0.0107561787479196!GO:0043067;regulation of programmed cell death;0.0108620432924048!GO:0000228;nuclear chromosome;0.011035031879747!GO:0000159;protein phosphatase type 2A complex;0.0113788551987133!GO:0006650;glycerophospholipid metabolic process;0.0116347995548159!GO:0008139;nuclear localization sequence binding;0.0117667794220473!GO:0032259;methylation;0.0119727733540916!GO:0050811;GABA receptor binding;0.01207663523493!GO:0004448;isocitrate dehydrogenase activity;0.0121283848940947!GO:0030496;midbody;0.0124487219175015!GO:0046128;purine ribonucleoside metabolic process;0.0127299740750884!GO:0042278;purine nucleoside metabolic process;0.0127299740750884!GO:0047017;prostaglandin-F synthase activity;0.0128398499439223!GO:0005769;early endosome;0.0133315538327836!GO:0007021;tubulin folding;0.013782785554744!GO:0003746;translation elongation factor activity;0.0138193094094089!GO:0042168;heme metabolic process;0.0139949244384993!GO:0006749;glutathione metabolic process;0.0141544107849481!GO:0042981;regulation of apoptosis;0.0144058157540425!GO:0006301;postreplication repair;0.0145990601889999!GO:0000049;tRNA binding;0.0148060365905216!GO:0030663;COPI coated vesicle membrane;0.0148060365905216!GO:0030126;COPI vesicle coat;0.0148060365905216!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0149558657305911!GO:0006497;protein amino acid lipidation;0.0152933662314384!GO:0042769;DNA damage response, detection of DNA damage;0.0156473866481191!GO:0042158;lipoprotein biosynthetic process;0.0156473866481191!GO:0016584;nucleosome positioning;0.0161241333573251!GO:0019207;kinase regulator activity;0.016125236972173!GO:0031124;mRNA 3'-end processing;0.0163133815523887!GO:0006144;purine base metabolic process;0.0164198434021387!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0164342151883223!GO:0004518;nuclease activity;0.0164849869174062!GO:0046365;monosaccharide catabolic process;0.0166480044798016!GO:0016585;chromatin remodeling complex;0.0168380821248644!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0169231594570904!GO:0051881;regulation of mitochondrial membrane potential;0.0169244657246934!GO:0050794;regulation of cellular process;0.0173897480335998!GO:0046164;alcohol catabolic process;0.0179849412211309!GO:0030658;transport vesicle membrane;0.0181022909061605!GO:0005754;mitochondrial proton-transporting ATP synthase, catalytic core;0.0181022909061605!GO:0000275;mitochondrial proton-transporting ATP synthase complex, catalytic core F(1);0.0181022909061605!GO:0045267;proton-transporting ATP synthase, catalytic core;0.0181022909061605!GO:0007093;mitotic cell cycle checkpoint;0.0186537877503188!GO:0004674;protein serine/threonine kinase activity;0.0193996798878963!GO:0043022;ribosome binding;0.0194736926400599!GO:0006595;polyamine metabolic process;0.0194736926400599!GO:0048519;negative regulation of biological process;0.019812573236712!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0199988869033036!GO:0045039;protein import into mitochondrial inner membrane;0.0199988869033036!GO:0008320;protein transmembrane transporter activity;0.0199988869033036!GO:0000082;G1/S transition of mitotic cell cycle;0.0200426027912139!GO:0048245;eosinophil chemotaxis;0.02015844011525!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0206537521652731!GO:0010257;NADH dehydrogenase complex assembly;0.0206537521652731!GO:0033108;mitochondrial respiratory chain complex assembly;0.0206537521652731!GO:0030136;clathrin-coated vesicle;0.020825032332783!GO:0007088;regulation of mitosis;0.0211792689583893!GO:0016563;transcription activator activity;0.0213927910906458!GO:0016791;phosphoric monoester hydrolase activity;0.0216501155385691!GO:0048037;cofactor binding;0.0217263570818567!GO:0005774;vacuolar membrane;0.0217901325174773!GO:0030508;thiol-disulfide exchange intermediate activity;0.0218161007144517!GO:0022884;macromolecule transmembrane transporter activity;0.0221883853594559!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0221883853594559!GO:0000725;recombinational repair;0.0222260495999295!GO:0000724;double-strand break repair via homologous recombination;0.0222260495999295!GO:0000209;protein polyubiquitination;0.0223224910642357!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0227627983448327!GO:0006783;heme biosynthetic process;0.0227627983448327!GO:0006096;glycolysis;0.0227627983448327!GO:0006108;malate metabolic process;0.0230060236503127!GO:0006541;glutamine metabolic process;0.0233509394988344!GO:0016776;phosphotransferase activity, phosphate group as acceptor;0.0245306445444977!GO:0016044;membrane organization and biogenesis;0.024618817892155!GO:0006350;transcription;0.0246519971575503!GO:0007018;microtubule-based movement;0.0246519971575503!GO:0043414;biopolymer methylation;0.0248383342337134!GO:0000287;magnesium ion binding;0.0248656928870485!GO:0019210;kinase inhibitor activity;0.0249815421863489!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0251437868550083!GO:0006367;transcription initiation from RNA polymerase II promoter;0.025164706236071!GO:0009408;response to heat;0.0252431311948722!GO:0019783;small conjugating protein-specific protease activity;0.0253163781930444!GO:0008276;protein methyltransferase activity;0.0258638509926963!GO:0006979;response to oxidative stress;0.0258638509926963!GO:0015036;disulfide oxidoreductase activity;0.0258638509926963!GO:0030518;steroid hormone receptor signaling pathway;0.0262955928449081!GO:0003955;NAD(P)H dehydrogenase (quinone) activity;0.026729678876538!GO:0019320;hexose catabolic process;0.026729678876538!GO:0001836;release of cytochrome c from mitochondria;0.0274551048140175!GO:0008538;proteasome activator activity;0.0275350858399397!GO:0004003;ATP-dependent DNA helicase activity;0.0281708437825616!GO:0000152;nuclear ubiquitin ligase complex;0.0282724324808387!GO:0004843;ubiquitin-specific protease activity;0.0283593430889157!GO:0030119;AP-type membrane coat adaptor complex;0.0283593430889157!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0287938537521598!GO:0003923;GPI-anchor transamidase activity;0.028981108635968!GO:0016255;attachment of GPI anchor to protein;0.028981108635968!GO:0042765;GPI-anchor transamidase complex;0.028981108635968!GO:0000792;heterochromatin;0.0292730139230328!GO:0004722;protein serine/threonine phosphatase activity;0.0296792101749511!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0299450970495801!GO:0006378;mRNA polyadenylation;0.030806068369197!GO:0050681;androgen receptor binding;0.031087930620258!GO:0008536;Ran GTPase binding;0.0311916774283872!GO:0004532;exoribonuclease activity;0.0317787545245031!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0317787545245031!GO:0007050;cell cycle arrest;0.0318999357899689!GO:0016407;acetyltransferase activity;0.032066920568006!GO:0031123;RNA 3'-end processing;0.0324439643089362!GO:0000118;histone deacetylase complex;0.0326507198761072!GO:0005784;translocon complex;0.0327249735526906!GO:0035267;NuA4 histone acetyltransferase complex;0.0330472939723314!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0335867761527817!GO:0005791;rough endoplasmic reticulum;0.0341103350400377!GO:0006467;protein thiol-disulfide exchange;0.0343710281609484!GO:0016790;thiolester hydrolase activity;0.0344053178060987!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0345599739011805!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0346999210393276!GO:0000910;cytokinesis;0.034811398221157!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0361900407234026!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0361900407234026!GO:0004721;phosphoprotein phosphatase activity;0.0363203269109396!GO:0043154;negative regulation of caspase activity;0.0368386307808945!GO:0009262;deoxyribonucleotide metabolic process;0.037418578320215!GO:0030660;Golgi-associated vesicle membrane;0.037477174029537!GO:0030131;clathrin adaptor complex;0.0378546767313859!GO:0043189;H4/H2A histone acetyltransferase complex;0.0380190406111952!GO:0007034;vacuolar transport;0.0384462131796172!GO:0004526;ribonuclease P activity;0.0384462131796172!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0385964657721597!GO:0004549;tRNA-specific ribonuclease activity;0.0390575014265524!GO:0016197;endosome transport;0.0393565086037197!GO:0004470;malic enzyme activity;0.0400353121124739!GO:0004300;enoyl-CoA hydratase activity;0.0403438181104796!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0412364390031876!GO:0044437;vacuolar part;0.0415376433847742!GO:0004221;ubiquitin thiolesterase activity;0.0415376433847742!GO:0009119;ribonucleoside metabolic process;0.0432039018957552!GO:0005680;anaphase-promoting complex;0.0433167023152435!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0435968610328105!GO:0006289;nucleotide-excision repair;0.0436121779051729!GO:0033673;negative regulation of kinase activity;0.0439219383951893!GO:0006469;negative regulation of protein kinase activity;0.0439219383951893!GO:0004523;ribonuclease H activity;0.0441956025407866!GO:0000726;non-recombinational repair;0.0446459314839246!GO:0044438;microbody part;0.0449699447395972!GO:0044439;peroxisomal part;0.0449699447395972!GO:0006470;protein amino acid dephosphorylation;0.0460413119493229!GO:0040029;regulation of gene expression, epigenetic;0.0466377994987158!GO:0042393;histone binding;0.0472641370660409!GO:0003756;protein disulfide isomerase activity;0.0476780617493113!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0476780617493113!GO:0032039;integrator complex;0.0476780617493113!GO:0009451;RNA modification;0.0477017734171255!GO:0000178;exosome (RNase complex);0.0478206609245779!GO:0016408;C-acyltransferase activity;0.0484257430291108!GO:0006220;pyrimidine nucleotide metabolic process;0.0484257430291108!GO:0031647;regulation of protein stability;0.0487505044486038!GO:0001671;ATPase activator activity;0.0491680991018166!GO:0007220;Notch receptor processing;0.0492362699627394!GO:0005851;eukaryotic translation initiation factor 2B complex;0.0499461694263456 | |||
|sample_id=10730 | |sample_id=10730 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=lung | |sample_tissue=lung | ||
|top_motifs=NKX2-3_NKX2-5:3.0629160625;HOX{A6,A7,B6,B7}:2.81448490467;ARID5B:2.6103218205;LMO2:2.4436012704;PBX1:2.26194124692;JUN:2.18148507942;GFI1:2.14427860033;PAX8:1.99375746373;NRF1:1.9542384212;DBP:1.82059430702;ONECUT1,2:1.81967028189;ESRRA:1.811208754;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.71039856615;NFY{A,B,C}:1.70994822966;HAND1,2:1.65671808594;NR5A1,2:1.57510254382;ZEB1:1.54687596629;ELK1,4_GABP{A,B1}:1.54137769888;POU6F1:1.47788716487;SOX{8,9,10}:1.47601928256;ZNF143:1.45840316478;SNAI1..3:1.43440991675;NANOG:1.39932031849;RFX1:1.39363980576;PAX3,7:1.36352032969;ADNP_IRX_SIX_ZHX:1.30750748366;ALX1:1.28007280535;YY1:1.24392517599;ATF5_CREB3:1.18618112416;E2F1..5:1.16057491822;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.00946542812;PRRX1,2:0.978230830694;TGIF1:0.944268008608;FOXA2:0.944007589236;POU5F1:0.94073527611;FOX{I1,J2}:0.935259008293;MYOD1:0.928665865532;PDX1:0.92270073856;CUX2:0.914731458827;GFI1B:0.910971924837;LEF1_TCF7_TCF7L1,2:0.867387667124;ATF2:0.866388002515;RORA:0.852904227157;STAT1,3:0.837471111321;POU1F1:0.836288324817;NHLH1,2:0.825041568201;VSX1,2:0.809477912987;GATA6:0.800115793514;NFE2L2:0.737576824246;BREu{core}:0.708311581705;SOX17:0.700441497744;SOX2:0.698381851638;FOXQ1:0.688344954101;AHR_ARNT_ARNT2:0.669449799194;HOX{A4,D4}:0.657138287862;RFX2..5_RFXANK_RFXAP:0.656428271837;ZBTB6:0.631965165066;POU2F1..3:0.60136850691;MEF2{A,B,C,D}:0.596833041757;PAX6:0.596790860416;MYB:0.555420630889;NR3C1:0.548749648783;REST:0.530856619899;PAX5:0.508092121147;ZFP161:0.478380839348;PAX1,9:0.471213976882;FOX{F1,F2,J1}:0.445787230866;MED-1{core}:0.435863961929;MYFfamily:0.403369956016;FOX{D1,D2}:0.400332091721;XBP1:0.37732932935;GTF2I:0.372826555444;FOXL1:0.352231039861;ATF4:0.306130274697;NKX2-1,4:0.29170592608;MZF1:0.290974643164;OCT4_SOX2{dimer}:0.290210364678;NKX3-2:0.267920475489;NFE2:0.261823356924;PATZ1:0.251809332582;TEF:0.24863249092;ZIC1..3:0.235407538968;TBP:0.231741846205;TFAP2B:0.222348353883;TFDP1:0.174388681646;CRX:0.155759691182;NKX3-1:0.144333807691;ZNF423:0.138555210893;NKX6-1,2:0.12707856103;STAT5{A,B}:0.110579890502;CDC5L:0.107373558811;EGR1..3:0.0847101977856;CREB1:0.0782614023932;FOXN1:0.0758282708582;HLF:0.0650544516713;SREBF1,2:0.0448785624042;AR:0.0308430802251;SP1:0.00555698548342;FOSL2:-0.034103292247;HOX{A5,B5}:-0.0360821439306;ZNF148:-0.0716004443215;MTE{core}:-0.100298861469;MTF1:-0.121441313035;bHLH_family:-0.122679903421;NFIX:-0.139380990662;FOXD3:-0.148338853438;LHX3,4:-0.159174085224;TP53:-0.168368014929;HNF1A:-0.178606083373;CDX1,2,4:-0.192570648919;FOXM1:-0.248723371606;CEBPA,B_DDIT3:-0.298498078336;FOXP1:-0.300372402035;HIC1:-0.320668264812;MAZ:-0.32679035814;PAX4:-0.332372036425;BACH2:-0.335125168749;HSF1,2:-0.352535468345;RBPJ:-0.389528702809;HNF4A_NR2F1,2:-0.40015224369;AIRE:-0.416012034696;SOX5:-0.420283169286;ZBTB16:-0.430677280912;FOS_FOS{B,L1}_JUN{B,D}:-0.435253661585;PAX2:-0.437052744893;NANOG{mouse}:-0.44231376158;POU3F1..4:-0.442350793085;SPIB:-0.450042765224;MYBL2:-0.466307474941;DMAP1_NCOR{1,2}_SMARC:-0.466410523151;RREB1:-0.506311099102;KLF4:-0.506680664647;PITX1..3:-0.510252762298;GZF1:-0.520294065232;ATF6:-0.525662379419;HMGA1,2:-0.527368399169;MAFB:-0.550284381749;XCPE1{core}:-0.556092734426;HIF1A:-0.561306893726;NFKB1_REL_RELA:-0.600055945111;EVI1:-0.618629311037;TLX1..3_NFIC{dimer}:-0.631653455951;RUNX1..3:-0.647417312683;SPI1:-0.662891662325;EN1,2:-0.682326711522;NR6A1:-0.682956733679;FOXP3:-0.691488986965;TLX2:-0.69810899185;ELF1,2,4:-0.731751886258;TFAP4:-0.755556643553;TBX4,5:-0.764777129053;UFEwm:-0.800645008693;SMAD1..7,9:-0.800653679135;PRDM1:-0.806378807843;PPARG:-0.81088444462;NKX2-2,8:-0.838213606549;NFE2L1:-0.849745848367;IKZF1:-0.851531674111;T:-0.870998543906;HBP1_HMGB_SSRP1_UBTF:-0.891066828375;ETS1,2:-0.900729306776;HOXA9_MEIS1:-0.903015419107;STAT2,4,6:-0.909400788975;RXRA_VDR{dimer}:-0.91872589592;HES1:-0.932855413142;NFIL3:-0.943708453688;RXR{A,B,G}:-0.947017987361;EP300:-0.947841170496;HMX1:-0.984299392399;TFCP2:-1.00065255142;IKZF2:-1.00726960974;GCM1,2:-1.06746883014;ZNF238:-1.07196560607;ESR1:-1.07645408761;GTF2A1,2:-1.09279904714;NR1H4:-1.10089082424;TFAP2{A,C}:-1.14516716699;ZNF384:-1.22930935345;FOXO1,3,4:-1.24845920354;TAL1_TCF{3,4,12}:-1.27806448132;TEAD1:-1.3292766982;GATA4:-1.33689681694;GLI1..3:-1.38661340234;NFATC1..3:-1.39275052633;EBF1:-1.45431178612;IRF1,2:-1.47515075591;TOPORS:-1.47561873954;IRF7:-1.51726756887;BPTF:-1.60930882027;ALX4:-1.75623026437;SRF:-1.91550752204;SPZ1:-2.07047517234 | |top_motifs=NKX2-3_NKX2-5:3.0629160625;HOX{A6,A7,B6,B7}:2.81448490467;ARID5B:2.6103218205;LMO2:2.4436012704;PBX1:2.26194124692;JUN:2.18148507942;GFI1:2.14427860033;PAX8:1.99375746373;NRF1:1.9542384212;DBP:1.82059430702;ONECUT1,2:1.81967028189;ESRRA:1.811208754;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.71039856615;NFY{A,B,C}:1.70994822966;HAND1,2:1.65671808594;NR5A1,2:1.57510254382;ZEB1:1.54687596629;ELK1,4_GABP{A,B1}:1.54137769888;POU6F1:1.47788716487;SOX{8,9,10}:1.47601928256;ZNF143:1.45840316478;SNAI1..3:1.43440991675;NANOG:1.39932031849;RFX1:1.39363980576;PAX3,7:1.36352032969;ADNP_IRX_SIX_ZHX:1.30750748366;ALX1:1.28007280535;YY1:1.24392517599;ATF5_CREB3:1.18618112416;E2F1..5:1.16057491822;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.00946542812;PRRX1,2:0.978230830694;TGIF1:0.944268008608;FOXA2:0.944007589236;POU5F1:0.94073527611;FOX{I1,J2}:0.935259008293;MYOD1:0.928665865532;PDX1:0.92270073856;CUX2:0.914731458827;GFI1B:0.910971924837;LEF1_TCF7_TCF7L1,2:0.867387667124;ATF2:0.866388002515;RORA:0.852904227157;STAT1,3:0.837471111321;POU1F1:0.836288324817;NHLH1,2:0.825041568201;VSX1,2:0.809477912987;GATA6:0.800115793514;NFE2L2:0.737576824246;BREu{core}:0.708311581705;SOX17:0.700441497744;SOX2:0.698381851638;FOXQ1:0.688344954101;AHR_ARNT_ARNT2:0.669449799194;HOX{A4,D4}:0.657138287862;RFX2..5_RFXANK_RFXAP:0.656428271837;ZBTB6:0.631965165066;POU2F1..3:0.60136850691;MEF2{A,B,C,D}:0.596833041757;PAX6:0.596790860416;MYB:0.555420630889;NR3C1:0.548749648783;REST:0.530856619899;PAX5:0.508092121147;ZFP161:0.478380839348;PAX1,9:0.471213976882;FOX{F1,F2,J1}:0.445787230866;MED-1{core}:0.435863961929;MYFfamily:0.403369956016;FOX{D1,D2}:0.400332091721;XBP1:0.37732932935;GTF2I:0.372826555444;FOXL1:0.352231039861;ATF4:0.306130274697;NKX2-1,4:0.29170592608;MZF1:0.290974643164;OCT4_SOX2{dimer}:0.290210364678;NKX3-2:0.267920475489;NFE2:0.261823356924;PATZ1:0.251809332582;TEF:0.24863249092;ZIC1..3:0.235407538968;TBP:0.231741846205;TFAP2B:0.222348353883;TFDP1:0.174388681646;CRX:0.155759691182;NKX3-1:0.144333807691;ZNF423:0.138555210893;NKX6-1,2:0.12707856103;STAT5{A,B}:0.110579890502;CDC5L:0.107373558811;EGR1..3:0.0847101977856;CREB1:0.0782614023932;FOXN1:0.0758282708582;HLF:0.0650544516713;SREBF1,2:0.0448785624042;AR:0.0308430802251;SP1:0.00555698548342;FOSL2:-0.034103292247;HOX{A5,B5}:-0.0360821439306;ZNF148:-0.0716004443215;MTE{core}:-0.100298861469;MTF1:-0.121441313035;bHLH_family:-0.122679903421;NFIX:-0.139380990662;FOXD3:-0.148338853438;LHX3,4:-0.159174085224;TP53:-0.168368014929;HNF1A:-0.178606083373;CDX1,2,4:-0.192570648919;FOXM1:-0.248723371606;CEBPA,B_DDIT3:-0.298498078336;FOXP1:-0.300372402035;HIC1:-0.320668264812;MAZ:-0.32679035814;PAX4:-0.332372036425;BACH2:-0.335125168749;HSF1,2:-0.352535468345;RBPJ:-0.389528702809;HNF4A_NR2F1,2:-0.40015224369;AIRE:-0.416012034696;SOX5:-0.420283169286;ZBTB16:-0.430677280912;FOS_FOS{B,L1}_JUN{B,D}:-0.435253661585;PAX2:-0.437052744893;NANOG{mouse}:-0.44231376158;POU3F1..4:-0.442350793085;SPIB:-0.450042765224;MYBL2:-0.466307474941;DMAP1_NCOR{1,2}_SMARC:-0.466410523151;RREB1:-0.506311099102;KLF4:-0.506680664647;PITX1..3:-0.510252762298;GZF1:-0.520294065232;ATF6:-0.525662379419;HMGA1,2:-0.527368399169;MAFB:-0.550284381749;XCPE1{core}:-0.556092734426;HIF1A:-0.561306893726;NFKB1_REL_RELA:-0.600055945111;EVI1:-0.618629311037;TLX1..3_NFIC{dimer}:-0.631653455951;RUNX1..3:-0.647417312683;SPI1:-0.662891662325;EN1,2:-0.682326711522;NR6A1:-0.682956733679;FOXP3:-0.691488986965;TLX2:-0.69810899185;ELF1,2,4:-0.731751886258;TFAP4:-0.755556643553;TBX4,5:-0.764777129053;UFEwm:-0.800645008693;SMAD1..7,9:-0.800653679135;PRDM1:-0.806378807843;PPARG:-0.81088444462;NKX2-2,8:-0.838213606549;NFE2L1:-0.849745848367;IKZF1:-0.851531674111;T:-0.870998543906;HBP1_HMGB_SSRP1_UBTF:-0.891066828375;ETS1,2:-0.900729306776;HOXA9_MEIS1:-0.903015419107;STAT2,4,6:-0.909400788975;RXRA_VDR{dimer}:-0.91872589592;HES1:-0.932855413142;NFIL3:-0.943708453688;RXR{A,B,G}:-0.947017987361;EP300:-0.947841170496;HMX1:-0.984299392399;TFCP2:-1.00065255142;IKZF2:-1.00726960974;GCM1,2:-1.06746883014;ZNF238:-1.07196560607;ESR1:-1.07645408761;GTF2A1,2:-1.09279904714;NR1H4:-1.10089082424;TFAP2{A,C}:-1.14516716699;ZNF384:-1.22930935345;FOXO1,3,4:-1.24845920354;TAL1_TCF{3,4,12}:-1.27806448132;TEAD1:-1.3292766982;GATA4:-1.33689681694;GLI1..3:-1.38661340234;NFATC1..3:-1.39275052633;EBF1:-1.45431178612;IRF1,2:-1.47515075591;TOPORS:-1.47561873954;IRF7:-1.51726756887;BPTF:-1.60930882027;ALX4:-1.75623026437;SRF:-1.91550752204;SPZ1:-2.07047517234 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10730-110B1;search_select_hide=table117:FF:10730-110B1 | |||
}} | }} | ||
Latest revision as of 15:02, 3 June 2020
| Name: | non-small cell lung cancer cell line:NCI-H1385 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12193 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12193
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12193
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.237 |
| 10 | 10 | 0.154 |
| 100 | 100 | 0.425 |
| 101 | 101 | 0.491 |
| 102 | 102 | 0.27 |
| 103 | 103 | 0.444 |
| 104 | 104 | 0.684 |
| 105 | 105 | 0.518 |
| 106 | 106 | 6.41911e-5 |
| 107 | 107 | 0.0191 |
| 108 | 108 | 0.614 |
| 109 | 109 | 0.112 |
| 11 | 11 | 0.125 |
| 110 | 110 | 0.215 |
| 111 | 111 | 0.0317 |
| 112 | 112 | 0.116 |
| 113 | 113 | 0.64 |
| 114 | 114 | 0.0219 |
| 115 | 115 | 0.376 |
| 116 | 116 | 0.16 |
| 117 | 117 | 0.0579 |
| 118 | 118 | 0.322 |
| 119 | 119 | 0.169 |
| 12 | 12 | 0.962 |
| 120 | 120 | 0.739 |
| 121 | 121 | 0.994 |
| 122 | 122 | 0.184 |
| 123 | 123 | 0.15 |
| 124 | 124 | 0.572 |
| 125 | 125 | 0.9 |
| 126 | 126 | 0.1 |
| 127 | 127 | 0.567 |
| 128 | 128 | 0.0344 |
| 129 | 129 | 0.966 |
| 13 | 13 | 0.0391 |
| 130 | 130 | 0.316 |
| 131 | 131 | 0.775 |
| 132 | 132 | 0.567 |
| 133 | 133 | 0.199 |
| 134 | 134 | 0.468 |
| 135 | 135 | 0.724 |
| 136 | 136 | 0.493 |
| 137 | 137 | 0.0792 |
| 138 | 138 | 0.486 |
| 139 | 139 | 0.0146 |
| 14 | 14 | 0.611 |
| 140 | 140 | 0.685 |
| 141 | 141 | 0.98 |
| 142 | 142 | 0.945 |
| 143 | 143 | 0.429 |
| 144 | 144 | 0.256 |
| 145 | 145 | 0.0446 |
| 146 | 146 | 0.773 |
| 147 | 147 | 0.804 |
| 148 | 148 | 0.00247 |
| 149 | 149 | 0.0755 |
| 15 | 15 | 0.201 |
| 150 | 150 | 0.24 |
| 151 | 151 | 0.235 |
| 152 | 152 | 0.0232 |
| 153 | 153 | 0.223 |
| 154 | 154 | 0.79 |
| 155 | 155 | 0.893 |
| 156 | 156 | 0.742 |
| 157 | 157 | 0.79 |
| 158 | 158 | 0.905 |
| 159 | 159 | 0.294 |
| 16 | 16 | 0.143 |
| 160 | 160 | 0.155 |
| 161 | 161 | 0.595 |
| 162 | 162 | 0.19 |
| 163 | 163 | 0.695 |
| 164 | 164 | 0.0737 |
| 165 | 165 | 0.199 |
| 166 | 166 | 0.469 |
| 167 | 167 | 0.192 |
| 168 | 168 | 0.106 |
| 169 | 169 | 0.00308 |
| 17 | 17 | 0.219 |
| 18 | 18 | 0.32 |
| 19 | 19 | 0.0383 |
| 2 | 2 | 0.679 |
| 20 | 20 | 0.438 |
| 21 | 21 | 0.035 |
| 22 | 22 | 0.116 |
| 23 | 23 | 0.0315 |
| 24 | 24 | 0.485 |
| 25 | 25 | 0.945 |
| 26 | 26 | 0.0132 |
| 27 | 27 | 0.662 |
| 28 | 28 | 0.74 |
| 29 | 29 | 0.273 |
| 3 | 3 | 0.125 |
| 30 | 30 | 0.93 |
| 31 | 31 | 0.747 |
| 32 | 32 | 0.00325 |
| 33 | 33 | 0.428 |
| 34 | 34 | 0.232 |
| 35 | 35 | 0.544 |
| 36 | 36 | 0.703 |
| 37 | 37 | 0.159 |
| 38 | 38 | 0.383 |
| 39 | 39 | 0.0679 |
| 4 | 4 | 0.533 |
| 40 | 40 | 0.176 |
| 41 | 41 | 0.465 |
| 42 | 42 | 0.907 |
| 43 | 43 | 0.0623 |
| 44 | 44 | 0.678 |
| 45 | 45 | 0.654 |
| 46 | 46 | 0.297 |
| 47 | 47 | 0.637 |
| 48 | 48 | 0.296 |
| 49 | 49 | 0.203 |
| 5 | 5 | 0.318 |
| 50 | 50 | 0.0492 |
| 51 | 51 | 0.628 |
| 52 | 52 | 0.054 |
| 53 | 53 | 0.542 |
| 54 | 54 | 0.274 |
| 55 | 55 | 0.125 |
| 56 | 56 | 0.867 |
| 57 | 57 | 0.489 |
| 58 | 58 | 0.482 |
| 59 | 59 | 0.0435 |
| 6 | 6 | 0.736 |
| 60 | 60 | 0.00613 |
| 61 | 61 | 0.0482 |
| 62 | 62 | 0.227 |
| 63 | 63 | 0.0145 |
| 64 | 64 | 0.649 |
| 65 | 65 | 0.192 |
| 66 | 66 | 0.117 |
| 67 | 67 | 0.961 |
| 68 | 68 | 0.734 |
| 69 | 69 | 0.333 |
| 7 | 7 | 0.499 |
| 70 | 70 | 0.0589 |
| 71 | 71 | 0.107 |
| 72 | 72 | 0.206 |
| 73 | 73 | 0.0556 |
| 74 | 74 | 0.649 |
| 75 | 75 | 0.249 |
| 76 | 76 | 0.262 |
| 77 | 77 | 0.137 |
| 78 | 78 | 0.0365 |
| 79 | 79 | 0.0388 |
| 8 | 8 | 0.129 |
| 80 | 80 | 0.639 |
| 81 | 81 | 0.232 |
| 82 | 82 | 0.147 |
| 83 | 83 | 0.714 |
| 84 | 84 | 0.608 |
| 85 | 85 | 0.0772 |
| 86 | 86 | 0.417 |
| 87 | 87 | 0.777 |
| 88 | 88 | 0.724 |
| 89 | 89 | 0.699 |
| 9 | 9 | 0.291 |
| 90 | 90 | 0.138 |
| 91 | 91 | 0.157 |
| 92 | 92 | 0.313 |
| 93 | 93 | 0.161 |
| 94 | 94 | 0.355 |
| 95 | 95 | 0.996 |
| 96 | 96 | 0.954 |
| 97 | 97 | 0.679 |
| 98 | 98 | 0.799 |
| 99 | 99 | 0.712 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12193
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
CL:0002553 lung fibroblast
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102553 non-small cell lung cancer cell line sample
FF:0103764 NCI cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000082 (epithelial cell of lung)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002553 (lung fibroblast)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
0050615 (respiratory system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
1324 (lung cancer)
305 (carcinoma)
1115 (sarcoma)
UBERON: Anatomy
0000468 (multi-cellular organism)
0002048 (lung)
0002100 (trunk)
0000483 (epithelium)
0002384 (connective tissue)
0000479 (tissue)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004802 (respiratory tract epithelium)
0000025 (tube)
0005911 (endo-epithelium)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0000072 (segment of respiratory tract)
0005177 (trunk region element)
0004807 (respiratory system epithelium)
0000117 (respiratory tube)
0000171 (respiration organ)
0000115 (lung epithelium)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0100353 (lung cell line sample)
0100453 (fibroblast cell line sample)
0100400 (sarcoma cell line sample)
0101120 (epithelial cell line sample)
0100460 (fibrosarcoma cell line sample)
0100762 (lung cancer cell line sample)
0102553 (non-small cell lung cancer cell line sample)
0103764 (NCI cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
UBERON:0001041 (foregut)
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)
