FF:10764-110E8: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00004882 | |DRA_sample_Accession=CAGE@SAMD00004882 | ||
|accession_numbers=CAGE;DRX007811;DRR008683;DRZ000108;DRZ001493 | |accession_numbers=CAGE;DRX007811;DRR008683;DRZ000108;DRZ001493;DRZ011458;DRZ012843 | ||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000255 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000255 | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase= | |data_phase=2 | ||
|datafreeze_phase= | |datafreeze_phase=2 | ||
|def= | |def= | ||
|expression_enrichment_score=chr13:72441315..72441454,-!p1@DACH1!2.36!436.07!DACH1;;chr16:85932760..85932775,+!p1@IRF8!2.21!161.40!IRF8;;chr7:27192185..27192209,-!p1@HOXA3!2.21!161.40!HOXA3;;chr11:47400078..47400106,-!p1@SPI1!2.18!149.90!SPI1;;chr6:135502501..135502546,+!p1@MYB!2.15!166.08!MYB;;chr7:96654133..96654150,-!p1@DLX5!2.12!130.73!DLX5;;chr7:50344289..50344323,+!p1@IKZF1!1.98!94.54!IKZF1;;chr7:27205136..27205164,-!p1@HOXA9!1.95!89.00!HOXA9;;chr2:68592406..68592424,+!p1@PLEK!1.95!87.72!PLEK;;chr3:189349162..189349207,+!p2@TP63!1.94!86.45!TP63;;chr6:135502408..135502459,+!p2@MYB!1.83!76.23!MYB;;chr12:54694758..54694805,-!p1@NFE2!1.74!65.15!NFE2;;chr18:55102628..55102646,+!p2@ONECUT2!1.73!52.80!ONECUT2;;chr18:55102598..55102623,+!p1@ONECUT2!1.68!46.84!ONECUT2;;chr19:33793430..33793447,-!p1@CEBPA!1.67!185.67!CEBPA;;chr7:27205106..27205134,-!p2@HOXA9!1.63!41.31!HOXA9;;chr2:100759037..100759058,-!p2@AFF3!1.58!36.62!AFF3;;chr1:92951607..92951661,-!p1@GFI1!1.53!32.79!GFI1;;chr16:54320617..54320643,-!p3@IRX3!1.52!41.31!IRX3;;chr13:72441074..72441172,-!p2@DACH1!1.51!31.51!DACH1;;chr10:31288398..31288455,-!p2@ZNF438!1.50!35.35!ZNF438;;chr16:54320646..54320672,-!p2@IRX3!1.49!45.14!IRX3;;chr7:115670804..115670825,-!p1@TFEC!1.48!28.96!TFEC;;chr5:88178983..88179012,-!p1@MEF2C!1.45!203.13!MEF2C;;chr19:13213662..13213686,-!p1@LYL1!1.44!38.75!LYL1;;chr7:27224842..27224872,-!p1@HOXA11!1.43!25.98!HOXA11;;chr18:22932080..22932170,-!p1@ZNF521!1.42!104.76!ZNF521;;chr7:27213893..27213954,-!p1@HOXA10!1.40!24.27!HOXA10;;chr12:54785074..54785122,-!p2@ZNF385A!1.36!33.22!ZNF385A;;chr11:47399996..47400014,-!p4@SPI1!1.35!21.29!SPI1;;chr7:27196217..27196246,-!p2@HOXA7!1.32!20.01!HOXA7;;chr12:54694807..54694832,-!p3@NFE2!1.31!19.59!NFE2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.31!19.59!ZBED1;;chr3:18486354..18486377,-!p2@SATB1!1.30!23.42!SATB1;;chr2:100759010..100759035,-!p1@AFF3!1.30!19.16!AFF3;;chr16:54319010..54319041,-!p8@IRX3!1.29!18.31!IRX3;;chr18:77155922..77155939,+!p1@NFATC1!1.28!48.55!NFATC1;;chr12:54785054..54785072,-!p4@ZNF385A!1.28!20.44!ZNF385A;;chr6:29648890..29648944,-!p1@ZFP57!1.28!17.89!ZFP57;;chr7:96654026..96654061,-!p2@DLX5!1.28!17.89!DLX5;;chr6:15246200..15246214,+!p2@JARID2!1.27!48.55!JARID2;;chr7:27224795..27224840,-!p2@HOXA11!1.27!17.46!HOXA11;;chr2:145277640..145277771,-!p1@ZEB2!1.25!220.16!ZEB2;;chr5:321810..321877,+!p1@AHRR!1.25!53.23!AHRR;;chr16:54320675..54320715,-!p1@IRX3!1.25!36.20!IRX3;;chr20:50159198..50159299,-!p1@NFATC2!1.23!23.42!NFATC2;;chr11:47400062..47400077,-!p2@SPI1!1.21!15.33!SPI1;;chr18:22932004..22932021,-!p2@ZNF521!1.18!14.05!ZNF521;;chr21:34442439..34442455,+!p1@OLIG1!1.17!13.63!OLIG1;;chr6:135502472..135502489,+!p3@MYB!1.17!13.63!MYB;;chr11:65554528..65554546,+!p1@OVOL1!1.14!12.78!OVOL1;;chr11:47399947..47399961,-!p3@SPI1!1.13!12.35!SPI1;;chr1:3569072..3569093,+!p1@TP73!1.13!12.35!TP73;;chr5:88179195..88179224,-!p3@MEF2C!1.11!19.16!MEF2C;;chr7:27205043..27205050,-!p5@HOXA9!1.11!11.92!HOXA9;;chr7:50343634..50343717,+!p2@IKZF1!1.11!11.92!IKZF1;;chr7:50344251..50344288,+!p3@IKZF1!1.11!11.92!IKZF1;;chr6:144385698..144385742,-!p2@PLAGL1!1.09!13.63!PLAGL1;;chrX:101975643..101975683,+!p1@BHLHB9!1.08!24.70!BHLHB9;;chr1:92949331..92949377,-!p2@GFI1!1.08!11.07!GFI1;;chr21:34442540..34442560,+!p2@OLIG1!1.08!11.07!OLIG1;;chr5:88179017..88179046,-!p2@MEF2C!1.06!42.16!MEF2C;;chr6:45390002..45390023,+!p6@RUNX2!1.04!17.46!RUNX2;;chr11:2292226..2292270,-!p1@ASCL2!1.03!9.79!ASCL2;;chr11:47400032..47400043,-!p5@SPI1!1.03!9.79!SPI1;;chr8:57123815..57123867,-!p1@PLAG1!1.00!37.47!PLAG1;;chr7:137620684..137620711,-!p4@CREB3L2!1.00!8.94!CREB3L2;;chr2:102091566..102091581,-!p1@RFX8!1.00!8.94!RFX8;;chr13:72440901..72440968,-!p4@DACH1!1.00!8.94!DACH1;;chr21:36421535..36421610,-!p2@RUNX1!0.98!31.09!RUNX1;;chr19:13213704..13213726,-!p3@LYL1!0.98!11.50!LYL1;;chr18:22931979..22931992,-!p3@ZNF521!0.98!8.52!ZNF521;;chr20:42295745..42295765,+!p1@MYBL2!0.96!135.84!MYBL2;;chr13:41593425..41593480,-!p1@ELF1!0.96!53.66!ELF1;;chr11:47400045..47400060,-!p6@SPI1!0.96!8.09!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!0.96!8.09!ZNF385A;;chr4:87857491..87857519,+!p10@AFF1!0.95!11.07!AFF1;;chr14:45722360..45722415,-!p1@MIS18BP1!0.94!124.35!MIS18BP1;;chr4:87857474..87857489,+!p7@AFF1!0.94!13.63!AFF1;;chr1:156470515..156470542,-!p2@MEF2D!0.92!40.03!MEF2D;;chr6:34204973..34204990,+!p4@HMGA1!0.91!99.65!HMGA1;;chr10:51572408..51572454,+!p3@NCOA4!0.91!43.44!NCOA4;;chr6:45390025..45390076,+!p2@RUNX2!0.91!17.89!RUNX2;;chr1:25291475..25291511,-!p2@RUNX3!0.89!6.81!RUNX3;;chr19:45579725..45579743,-!p1@ZNF296!0.87!30.24!ZNF296;;chr10:51572339..51572376,+!p4@NCOA4!0.87!14.90!NCOA4;;chr12:54694653..54694672,-!p2@NFE2!0.87!6.39!NFE2;;chr19:13213954..13214021,-!p4@LYL1!0.87!6.39!LYL1;;chr2:68592394..68592405,+!p2@PLEK!0.87!6.39!PLEK;;chr3:189348969..189349018,+!p4@TP63!0.87!6.39!TP63;;chr3:129158715..129158766,-!p2@MBD4!0.86!63.88!MBD4;;chr6:45390269..45390298,+!p5@RUNX2!0.86!10.65!RUNX2;;chr7:128577972..128578047,+!p1@IRF5!0.85!9.79!IRF5;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ZNF248!0.21!3.41!ZNF248;;chr1:211432887..211432903,+!p4@RCOR3!0.21!2.56!RCOR3;;chr1:28995231..28995250,+!p2@GMEB1!0.21!2.13!GMEB1;;chr14:64970427..64970457,+!p3@ZBTB1!0.21!2.13!ZBTB1;;chr6:7108179..7108199,+!p4@RREB1!0.21!2.13!RREB1;;chr8:72756063..72756125,-!p1@MSC!0.21!2.13!MSC;;chr6:157099159..157099185,+!p6@ARID1B!0.21!1.70!ARID1B;;chr7:74072193..74072218,+!p4@GTF2I!0.21!1.70!GTF2I;;chr13:115079801..115079832,+!p2@CHAMP1!0.21!1.70!CHAMP1;;chr13:46549840..46549882,-!p4@ZC3H13!0.21!1.28!ZC3H13;;chr2:174830540..174830563,-!p8@SP3!0.21!1.28!SP3;;chr3:107318157..107318172,+!p6@BBX!0.21!1.28!BBX;;chr3:71632894..71632909,-!p17@FOXP1!0.21!1.28!FOXP1;;chr2:231084820..231084836,-!p5@SP110!0.21!0.85!SP110;;chr3:5020582..5020599,+!p10@BHLHE40!0.21!0.85!BHLHE40;;chr10:21823296..21823309,+!p8@MLLT10!0.21!0.85!MLLT10;;chr18:56530595..56530606,+!p11@ZNF532!0.21!0.85!ZNF532;;chr5:140080022..140080042,+!p1@ZMAT2!0.20!77.08!ZMAT2;;chr19:56632592..56632670,-!p1@ZNF787!0.20!31.94!ZNF787;;chr1:78149041..78149142,-!p1@ZZZ3!0.20!26.83!ZZZ3;;chr4:95128748..95128794,+!p1@SMARCAD1!0.20!17.46!SMARCAD1;;chr7:99214559..99214601,+!p1@ZNF498!0.20!17.46!ZNF498;;chr4:331578..331615,+!p1@ZNF141!0.20!14.90!ZNF141;;chr19:40562072..40562143,-!p1@ZNF780B!0.20!12.35!ZNF780B;;chr3:40566428..40566480,+!p1@ZNF621!0.20!10.65!ZNF621;;chr4:87856191..87856208,+!p2@AFF1!0.20!10.65!AFF1;;chr19:1592714..1592762,-!p1@MBD3!0.20!10.22!MBD3;;chrX:152599604..152599626,+!p1@ZNF275!0.20!10.22!ZNF275;;chr19:11925071..11925113,+!p1@ZNF440!0.20!9.79!ZNF440;;chr19:58331073..58331084,+!p3@ZNF587!0.20!4.68!ZNF587;;chrX:106960180..106960197,-!p2@TSC22D3!0.20!4.68!TSC22D3;;chr19:6280025..6280040,-!p2@MLLT1!0.20!4.26!MLLT1;;chr1:151043216..151043256,+!p1@GABPB2!0.20!4.26!GABPB2;;chr1:67396044..67396071,+!p3@MIER1!0.20!4.26!MIER1;;chr19:19516543..19516559,+!p6@GATAD2A!0.20!3.83!GATAD2A;;chr12:19671171..19671175,+!p4@AEBP2!0.20!2.56!AEBP2;;chr6:144329500..144329526,-!p4@PLAGL1!0.20!2.56!PLAGL1;;chr12:57919364..57919394,+!p4@MBD6!0.20!2.13!MBD6;;chr6:12012249..12012266,+!p5@HIVEP1!0.20!1.70!HIVEP1;;chr1:16302608..16302621,-!p2@ZBTB17!0.20!1.70!ZBTB17;;chr4:38665659..38665670,+!p6@KLF3!0.20!1.70!KLF3;;chr2:11605966..11605981,-!p3@E2F6!0.20!0.85!E2F6;;chr4:81104958..81104981,+!p5@PRDM8!0.20!0.85!PRDM8;;chr6:28109703..28109714,+!p3@ZNF192!0.20!0.85!ZNF192;;chr8:103666182..103666197,-!p4@KLF10!0.20!0.85!KLF10;;chr19:11877923..11877945,+!p3@ZNF441!0.20!0.85!ZNF441;;chr1:114258267..114258270,-!p5@PHTF1!0.20!0.85!PHTF1;;chr1:150849208..150849217,-!p3@ARNT!0.20!0.85!ARNT;;chr1:158985469..158985489,+!p7@IFI16!0.20!0.85!IFI16;;chr2:27357479..27357524,-!p1@PREB!0.19!39.60!PREB;;chr14:75894714..75894733,+!p1@JDP2!0.19!39.18!JDP2;;chr15:31619013..31619095,+!p1@KLF13!0.19!31.94!KLF13;;chr1:161015752..161015778,-!p2@USF1!0.19!15.76!USF1;;chr18:48494379..48494426,+!p1@ELAC1,p2@SMAD4!0.19!14.90!SMAD4;;chr12:133758072..133758114,+!p1@ZNF268!0.19!11.92!ZNF268;;chr18:72265084..72265143,+!p1@ZNF407!0.19!9.79!ZNF407;;chr12:498695..498748,-!p2@KDM5A!0.19!8.52!KDM5A;;chr6:35227480..35227546,+!p1@ZNF76!0.19!8.52!ZNF76;;chr19:58361185..58361235,+!p2@ZNF587!0.19!6.81!ZNF587;;chr12:96588279..96588299,+!p4@ELK3!0.19!5.96!ELK3;;chr19:52800410..52800454,+!p1@ZNF480!0.19!5.54!ZNF480;;chr19:53073532..53073551,+!p1@ZNF701!0.19!5.54!ZNF701;;chr9:129622904..129622956,+!p1@ZBTB34!0.19!4.26!ZBTB34;;chr4:4291837..4291859,-!p2@LYAR!0.19!3.83!LYAR;;chrX:24167548..24167617,+!p2@ZFX!0.19!3.41!ZFX;;chr20:42543506..42543549,+!p2@TOX2!0.19!2.56!TOX2;;chr2:11606283..11606289,-!p1@E2F6!0.19!2.13!E2F6;;chr7:6676930..6676939,+!p3@ENST00000427912!0.19!1.70!ZNF316;;chr19:58373157..58373159,+!p4@ZNF587!0.19!1.70!ZNF587;;chr1:221052776..221052799,+!p1@HLX!0.19!1.70!HLX;;chrX:129244655..129244697,-!p4@ELF4!0.19!1.70!ELF4;; | |expression_enrichment_score=chr13:72441315..72441454,-!p1@DACH1!2.36!436.07!DACH1;;chr16:85932760..85932775,+!p1@IRF8!2.21!161.40!IRF8;;chr7:27192185..27192209,-!p1@HOXA3!2.21!161.40!HOXA3;;chr11:47400078..47400106,-!p1@SPI1!2.18!149.90!SPI1;;chr6:135502501..135502546,+!p1@MYB!2.15!166.08!MYB;;chr7:96654133..96654150,-!p1@DLX5!2.12!130.73!DLX5;;chr7:50344289..50344323,+!p1@IKZF1!1.98!94.54!IKZF1;;chr7:27205136..27205164,-!p1@HOXA9!1.95!89.00!HOXA9;;chr2:68592406..68592424,+!p1@PLEK!1.95!87.72!PLEK;;chr3:189349162..189349207,+!p2@TP63!1.94!86.45!TP63;;chr6:135502408..135502459,+!p2@MYB!1.83!76.23!MYB;;chr12:54694758..54694805,-!p1@NFE2!1.74!65.15!NFE2;;chr18:55102628..55102646,+!p2@ONECUT2!1.73!52.80!ONECUT2;;chr18:55102598..55102623,+!p1@ONECUT2!1.68!46.84!ONECUT2;;chr19:33793430..33793447,-!p1@CEBPA!1.67!185.67!CEBPA;;chr7:27205106..27205134,-!p2@HOXA9!1.63!41.31!HOXA9;;chr2:100759037..100759058,-!p2@AFF3!1.58!36.62!AFF3;;chr1:92951607..92951661,-!p1@GFI1!1.53!32.79!GFI1;;chr16:54320617..54320643,-!p3@IRX3!1.52!41.31!IRX3;;chr13:72441074..72441172,-!p2@DACH1!1.51!31.51!DACH1;;chr10:31288398..31288455,-!p2@ZNF438!1.50!35.35!ZNF438;;chr16:54320646..54320672,-!p2@IRX3!1.49!45.14!IRX3;;chr7:115670804..115670825,-!p1@TFEC!1.48!28.96!TFEC;;chr5:88178983..88179012,-!p1@MEF2C!1.45!203.13!MEF2C;;chr19:13213662..13213686,-!p1@LYL1!1.44!38.75!LYL1;;chr7:27224842..27224872,-!p1@HOXA11!1.43!25.98!HOXA11;;chr18:22932080..22932170,-!p1@ZNF521!1.42!104.76!ZNF521;;chr7:27213893..27213954,-!p1@HOXA10!1.40!24.27!HOXA10;;chr12:54785074..54785122,-!p2@ZNF385A!1.36!33.22!ZNF385A;;chr11:47399996..47400014,-!p4@SPI1!1.35!21.29!SPI1;;chr7:27196217..27196246,-!p2@HOXA7!1.32!20.01!HOXA7;;chr12:54694807..54694832,-!p3@NFE2!1.31!19.59!NFE2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.31!19.59!ZBED1;;chr3:18486354..18486377,-!p2@SATB1!1.30!23.42!SATB1;;chr2:100759010..100759035,-!p1@AFF3!1.30!19.16!AFF3;;chr16:54319010..54319041,-!p8@IRX3!1.29!18.31!IRX3;;chr18:77155922..77155939,+!p1@NFATC1!1.28!48.55!NFATC1;;chr12:54785054..54785072,-!p4@ZNF385A!1.28!20.44!ZNF385A;;chr6:29648890..29648944,-!p1@ZFP57!1.28!17.89!ZFP57;;chr7:96654026..96654061,-!p2@DLX5!1.28!17.89!DLX5;;chr6:15246200..15246214,+!p2@JARID2!1.27!48.55!JARID2;;chr7:27224795..27224840,-!p2@HOXA11!1.27!17.46!HOXA11;;chr2:145277640..145277771,-!p1@ZEB2!1.25!220.16!ZEB2;;chr5:321810..321877,+!p1@AHRR!1.25!53.23!AHRR;;chr16:54320675..54320715,-!p1@IRX3!1.25!36.20!IRX3;;chr20:50159198..50159299,-!p1@NFATC2!1.23!23.42!NFATC2;;chr11:47400062..47400077,-!p2@SPI1!1.21!15.33!SPI1;;chr18:22932004..22932021,-!p2@ZNF521!1.18!14.05!ZNF521;;chr21:34442439..34442455,+!p1@OLIG1!1.17!13.63!OLIG1;;chr6:135502472..135502489,+!p3@MYB!1.17!13.63!MYB;;chr11:65554528..65554546,+!p1@OVOL1!1.14!12.78!OVOL1;;chr11:47399947..47399961,-!p3@SPI1!1.13!12.35!SPI1;;chr1:3569072..3569093,+!p1@TP73!1.13!12.35!TP73;;chr5:88179195..88179224,-!p3@MEF2C!1.11!19.16!MEF2C;;chr7:27205043..27205050,-!p5@HOXA9!1.11!11.92!HOXA9;;chr7:50343634..50343717,+!p2@IKZF1!1.11!11.92!IKZF1;;chr7:50344251..50344288,+!p3@IKZF1!1.11!11.92!IKZF1;;chr6:144385698..144385742,-!p2@PLAGL1!1.09!13.63!PLAGL1;;chrX:101975643..101975683,+!p1@BHLHB9!1.08!24.70!BHLHB9;;chr1:92949331..92949377,-!p2@GFI1!1.08!11.07!GFI1;;chr21:34442540..34442560,+!p2@OLIG1!1.08!11.07!OLIG1;;chr5:88179017..88179046,-!p2@MEF2C!1.06!42.16!MEF2C;;chr6:45390002..45390023,+!p6@RUNX2!1.04!17.46!RUNX2;;chr11:2292226..2292270,-!p1@ASCL2!1.03!9.79!ASCL2;;chr11:47400032..47400043,-!p5@SPI1!1.03!9.79!SPI1;;chr8:57123815..57123867,-!p1@PLAG1!1.00!37.47!PLAG1;;chr7:137620684..137620711,-!p4@CREB3L2!1.00!8.94!CREB3L2;;chr2:102091566..102091581,-!p1@RFX8!1.00!8.94!RFX8;;chr13:72440901..72440968,-!p4@DACH1!1.00!8.94!DACH1;;chr21:36421535..36421610,-!p2@RUNX1!0.98!31.09!RUNX1;;chr19:13213704..13213726,-!p3@LYL1!0.98!11.50!LYL1;;chr18:22931979..22931992,-!p3@ZNF521!0.98!8.52!ZNF521;;chr20:42295745..42295765,+!p1@MYBL2!0.96!135.84!MYBL2;;chr13:41593425..41593480,-!p1@ELF1!0.96!53.66!ELF1;;chr11:47400045..47400060,-!p6@SPI1!0.96!8.09!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!0.96!8.09!ZNF385A;;chr4:87857491..87857519,+!p10@AFF1!0.95!11.07!AFF1;;chr14:45722360..45722415,-!p1@MIS18BP1!0.94!124.35!MIS18BP1;;chr4:87857474..87857489,+!p7@AFF1!0.94!13.63!AFF1;;chr1:156470515..156470542,-!p2@MEF2D!0.92!40.03!MEF2D;;chr6:34204973..34204990,+!p4@HMGA1!0.91!99.65!HMGA1;;chr10:51572408..51572454,+!p3@NCOA4!0.91!43.44!NCOA4;;chr6:45390025..45390076,+!p2@RUNX2!0.91!17.89!RUNX2;;chr1:25291475..25291511,-!p2@RUNX3!0.89!6.81!RUNX3;;chr19:45579725..45579743,-!p1@ZNF296!0.87!30.24!ZNF296;;chr10:51572339..51572376,+!p4@NCOA4!0.87!14.90!NCOA4;;chr12:54694653..54694672,-!p2@NFE2!0.87!6.39!NFE2;;chr19:13213954..13214021,-!p4@LYL1!0.87!6.39!LYL1;;chr2:68592394..68592405,+!p2@PLEK!0.87!6.39!PLEK;;chr3:189348969..189349018,+!p4@TP63!0.87!6.39!TP63;;chr3:129158715..129158766,-!p2@MBD4!0.86!63.88!MBD4;;chr6:45390269..45390298,+!p5@RUNX2!0.86!10.65!RUNX2;;chr7:128577972..128578047,+!p1@IRF5!0.85!9.79!IRF5;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| ||
Line 41: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aNOMO-1.CNhs13050.10764-110E8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aNOMO-1.CNhs13050.10764-110E8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aNOMO-1.CNhs13050.10764-110E8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aNOMO-1.CNhs13050.10764-110E8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M5%2529%2520cell%2520line%253aNOMO-1.CNhs13050.10764-110E8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10764-110E8 | |id=FF:10764-110E8 | ||
|is_a=EFO:0002091;;FF:0000210;;FF:0101883 | |is_a=EFO:0002091;;FF:0000210;;FF:0101883 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs13050 | |library_id=CNhs13050 | ||
|library_id_phase_based= | |library_id_phase_based=2:CNhs13050 | ||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10764 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10764 | |||
|name=acute myeloid leukemia (FAB M5) cell line:NOMO-1 | |name=acute myeloid leukemia (FAB M5) cell line:NOMO-1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 51: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13050,LSID1000,release012,COMPLETED | |profile_hcage=CNhs13050,LSID1000,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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Line 65: | Line 75: | ||
|rna_rin= | |rna_rin= | ||
|rna_sample_type=total RNA | |rna_sample_type=total RNA | ||
|rna_tube_id= | |rna_tube_id=1.10E+10 | ||
|rna_weight_ug=85.1805 | |rna_weight_ug=85.1805 | ||
|sample_age=unknown | |sample_age=unknown | ||
Line 90: | Line 100: | ||
|top_motifs=RXR{A,B,G}_{NR1H2,PPAR}dimers:1.88410613977;MYB:1.8024348309;E2F1..5:1.50662764671;FOXA2:1.37659039163;MTF1:1.32768983287;POU5F1:1.31348507274;HOX{A6,A7,B6,B7}:1.26094247399;NANOG:1.2151302696;POU2F1..3:1.14858106798;YY1:0.952615884926;NFY{A,B,C}:0.931512065545;BREu{core}:0.832220757348;SPIB:0.829873434172;TOPORS:0.761874632397;SPI1:0.742520648454;FOXP1:0.720436852554;OCT4_SOX2{dimer}:0.717655386318;PITX1..3:0.636551990338;DMAP1_NCOR{1,2}_SMARC:0.630889218223;ELK1,4_GABP{A,B1}:0.614593796292;ETS1,2:0.556008898383;CRX:0.53922716774;ELF1,2,4:0.537423027995;IKZF2:0.518356580762;TFDP1:0.507628327996;HAND1,2:0.480661566526;CUX2:0.455717122646;NFIL3:0.451719673798;NKX3-1:0.432449488276;EN1,2:0.422324446744;VSX1,2:0.407720848006;FOXN1:0.394887305052;POU1F1:0.336802856311;GATA6:0.331911879785;SREBF1,2:0.289043537015;NKX2-3_NKX2-5:0.283880566199;PRRX1,2:0.274414975881;PAX3,7:0.253869626846;CEBPA,B_DDIT3:0.252994027499;FOXP3:0.241265098361;ZNF143:0.236980609822;MYOD1:0.195849742402;NR5A1,2:0.193038181551;DBP:0.19164071582;RUNX1..3:0.191260248455;HLF:0.139402134252;HNF4A_NR2F1,2:0.136641464994;RXRA_VDR{dimer}:0.133385388347;FOXQ1:0.132512886126;PAX2:0.0910226778088;HOX{A4,D4}:0.0840197023242;NRF1:0.0621820849005;NKX2-1,4:0.061160903784;CREB1:0.0592565777416;CDX1,2,4:0.0337514586589;AHR_ARNT_ARNT2:0.017928884621;GFI1:0.015414205315;TBP:-0.0277668878305;TLX2:-0.0396683067568;ZBTB16:-0.051121728477;RORA:-0.0517577272538;TGIF1:-0.115159376232;HOX{A5,B5}:-0.120912407735;POU3F1..4:-0.125112588206;PPARG:-0.140868286304;NKX2-2,8:-0.142248715556;ATF4:-0.148826338249;PBX1:-0.152246625091;AIRE:-0.159797357147;EP300:-0.163870548624;NR6A1:-0.16513433013;SOX17:-0.169045275773;POU6F1:-0.17647991341;PRDM1:-0.177989121139;STAT1,3:-0.186143611236;ESRRA:-0.201866605173;SP1:-0.202178092159;PAX6:-0.205076706925;AR:-0.210459911915;PAX4:-0.222824058947;IRF1,2:-0.229238401135;ZNF423:-0.247131997547;SOX{8,9,10}:-0.249047178027;NFE2:-0.254625136129;HMGA1,2:-0.255624751778;ALX1:-0.26345092961;REST:-0.266734034682;ATF5_CREB3:-0.277571139459;HBP1_HMGB_SSRP1_UBTF:-0.278878640752;TEF:-0.283747124908;HNF1A:-0.294764064336;HOXA9_MEIS1:-0.299275919346;NFKB1_REL_RELA:-0.309894505811;XCPE1{core}:-0.323366569002;IRF7:-0.330368209452;MTE{core}:-0.333970856793;ZNF148:-0.362753721308;bHLH_family:-0.371294772115;MYFfamily:-0.383496367227;SNAI1..3:-0.389586271643;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.397771021078;NANOG{mouse}:-0.398551042732;ZEB1:-0.399401089074;FOS_FOS{B,L1}_JUN{B,D}:-0.414845043797;NKX3-2:-0.420823622471;PAX8:-0.423002062468;NHLH1,2:-0.448176634863;RFX2..5_RFXANK_RFXAP:-0.448564558022;ESR1:-0.460442774449;KLF4:-0.469224125693;GCM1,2:-0.48545754911;MZF1:-0.493330140135;LMO2:-0.507882917549;GATA4:-0.521252187033;MED-1{core}:-0.523878056957;TP53:-0.54735973237;FOXO1,3,4:-0.587577155798;MEF2{A,B,C,D}:-0.594224536986;FOSL2:-0.59483507782;BACH2:-0.599084422973;PDX1:-0.605810290407;FOX{F1,F2,J1}:-0.627431350808;PAX5:-0.630195291911;ARID5B:-0.637793736987;GFI1B:-0.643587927633;SOX5:-0.648875905372;RXR{A,B,G}:-0.655156856848;HSF1,2:-0.678591494507;MYBL2:-0.679124952438;HIC1:-0.683258769117;NFIX:-0.704325000144;XBP1:-0.706912645613;T:-0.714343260014;ZNF238:-0.719625754853;ZFP161:-0.722487919006;GTF2A1,2:-0.741666321613;HIF1A:-0.743465423929;STAT5{A,B}:-0.745920039277;GZF1:-0.755580747454;PAX1,9:-0.761898408988;EGR1..3:-0.764036906321;NFE2L2:-0.801646271507;ATF2:-0.803502110968;CDC5L:-0.809331963102;NKX6-1,2:-0.819468277743;ONECUT1,2:-0.827393307896;UFEwm:-0.830308909577;HES1:-0.830330250588;TFAP4:-0.842950100989;TFAP2{A,C}:-0.854851322455;RBPJ:-0.85488501153;ADNP_IRX_SIX_ZHX:-0.873039434727;MAFB:-0.875294732471;GTF2I:-0.888762691652;LEF1_TCF7_TCF7L1,2:-0.900207251025;NFE2L1:-0.911101444801;TFAP2B:-0.915757255406;ZNF384:-0.920099401146;FOXL1:-0.921648634383;BPTF:-0.930556369511;NR1H4:-0.944279266894;HMX1:-0.952791396134;SRF:-0.974045564037;RFX1:-1.02267964836;ZIC1..3:-1.02473799043;SMAD1..7,9:-1.02917880472;LHX3,4:-1.05166199408;TAL1_TCF{3,4,12}:-1.10292297993;EBF1:-1.12567613803;RREB1:-1.13282688099;EVI1:-1.14975124764;IKZF1:-1.15889813681;PATZ1:-1.18359768448;FOX{I1,J2}:-1.18903488846;STAT2,4,6:-1.19076553679;TFCP2:-1.19233849854;FOXD3:-1.20196433549;TLX1..3_NFIC{dimer}:-1.21262617753;SOX2:-1.21639302551;FOXM1:-1.27199353689;TEAD1:-1.29194953288;SPZ1:-1.29961538598;FOX{D1,D2}:-1.30209583367;JUN:-1.30430826595;NFATC1..3:-1.33454378043;MAZ:-1.37100109737;GLI1..3:-1.37132327652;ATF6:-1.45665287296;ALX4:-1.52435450717;TBX4,5:-1.5424170329;ZBTB6:-1.69612298263;NR3C1:-2.03273776278 | |top_motifs=RXR{A,B,G}_{NR1H2,PPAR}dimers:1.88410613977;MYB:1.8024348309;E2F1..5:1.50662764671;FOXA2:1.37659039163;MTF1:1.32768983287;POU5F1:1.31348507274;HOX{A6,A7,B6,B7}:1.26094247399;NANOG:1.2151302696;POU2F1..3:1.14858106798;YY1:0.952615884926;NFY{A,B,C}:0.931512065545;BREu{core}:0.832220757348;SPIB:0.829873434172;TOPORS:0.761874632397;SPI1:0.742520648454;FOXP1:0.720436852554;OCT4_SOX2{dimer}:0.717655386318;PITX1..3:0.636551990338;DMAP1_NCOR{1,2}_SMARC:0.630889218223;ELK1,4_GABP{A,B1}:0.614593796292;ETS1,2:0.556008898383;CRX:0.53922716774;ELF1,2,4:0.537423027995;IKZF2:0.518356580762;TFDP1:0.507628327996;HAND1,2:0.480661566526;CUX2:0.455717122646;NFIL3:0.451719673798;NKX3-1:0.432449488276;EN1,2:0.422324446744;VSX1,2:0.407720848006;FOXN1:0.394887305052;POU1F1:0.336802856311;GATA6:0.331911879785;SREBF1,2:0.289043537015;NKX2-3_NKX2-5:0.283880566199;PRRX1,2:0.274414975881;PAX3,7:0.253869626846;CEBPA,B_DDIT3:0.252994027499;FOXP3:0.241265098361;ZNF143:0.236980609822;MYOD1:0.195849742402;NR5A1,2:0.193038181551;DBP:0.19164071582;RUNX1..3:0.191260248455;HLF:0.139402134252;HNF4A_NR2F1,2:0.136641464994;RXRA_VDR{dimer}:0.133385388347;FOXQ1:0.132512886126;PAX2:0.0910226778088;HOX{A4,D4}:0.0840197023242;NRF1:0.0621820849005;NKX2-1,4:0.061160903784;CREB1:0.0592565777416;CDX1,2,4:0.0337514586589;AHR_ARNT_ARNT2:0.017928884621;GFI1:0.015414205315;TBP:-0.0277668878305;TLX2:-0.0396683067568;ZBTB16:-0.051121728477;RORA:-0.0517577272538;TGIF1:-0.115159376232;HOX{A5,B5}:-0.120912407735;POU3F1..4:-0.125112588206;PPARG:-0.140868286304;NKX2-2,8:-0.142248715556;ATF4:-0.148826338249;PBX1:-0.152246625091;AIRE:-0.159797357147;EP300:-0.163870548624;NR6A1:-0.16513433013;SOX17:-0.169045275773;POU6F1:-0.17647991341;PRDM1:-0.177989121139;STAT1,3:-0.186143611236;ESRRA:-0.201866605173;SP1:-0.202178092159;PAX6:-0.205076706925;AR:-0.210459911915;PAX4:-0.222824058947;IRF1,2:-0.229238401135;ZNF423:-0.247131997547;SOX{8,9,10}:-0.249047178027;NFE2:-0.254625136129;HMGA1,2:-0.255624751778;ALX1:-0.26345092961;REST:-0.266734034682;ATF5_CREB3:-0.277571139459;HBP1_HMGB_SSRP1_UBTF:-0.278878640752;TEF:-0.283747124908;HNF1A:-0.294764064336;HOXA9_MEIS1:-0.299275919346;NFKB1_REL_RELA:-0.309894505811;XCPE1{core}:-0.323366569002;IRF7:-0.330368209452;MTE{core}:-0.333970856793;ZNF148:-0.362753721308;bHLH_family:-0.371294772115;MYFfamily:-0.383496367227;SNAI1..3:-0.389586271643;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.397771021078;NANOG{mouse}:-0.398551042732;ZEB1:-0.399401089074;FOS_FOS{B,L1}_JUN{B,D}:-0.414845043797;NKX3-2:-0.420823622471;PAX8:-0.423002062468;NHLH1,2:-0.448176634863;RFX2..5_RFXANK_RFXAP:-0.448564558022;ESR1:-0.460442774449;KLF4:-0.469224125693;GCM1,2:-0.48545754911;MZF1:-0.493330140135;LMO2:-0.507882917549;GATA4:-0.521252187033;MED-1{core}:-0.523878056957;TP53:-0.54735973237;FOXO1,3,4:-0.587577155798;MEF2{A,B,C,D}:-0.594224536986;FOSL2:-0.59483507782;BACH2:-0.599084422973;PDX1:-0.605810290407;FOX{F1,F2,J1}:-0.627431350808;PAX5:-0.630195291911;ARID5B:-0.637793736987;GFI1B:-0.643587927633;SOX5:-0.648875905372;RXR{A,B,G}:-0.655156856848;HSF1,2:-0.678591494507;MYBL2:-0.679124952438;HIC1:-0.683258769117;NFIX:-0.704325000144;XBP1:-0.706912645613;T:-0.714343260014;ZNF238:-0.719625754853;ZFP161:-0.722487919006;GTF2A1,2:-0.741666321613;HIF1A:-0.743465423929;STAT5{A,B}:-0.745920039277;GZF1:-0.755580747454;PAX1,9:-0.761898408988;EGR1..3:-0.764036906321;NFE2L2:-0.801646271507;ATF2:-0.803502110968;CDC5L:-0.809331963102;NKX6-1,2:-0.819468277743;ONECUT1,2:-0.827393307896;UFEwm:-0.830308909577;HES1:-0.830330250588;TFAP4:-0.842950100989;TFAP2{A,C}:-0.854851322455;RBPJ:-0.85488501153;ADNP_IRX_SIX_ZHX:-0.873039434727;MAFB:-0.875294732471;GTF2I:-0.888762691652;LEF1_TCF7_TCF7L1,2:-0.900207251025;NFE2L1:-0.911101444801;TFAP2B:-0.915757255406;ZNF384:-0.920099401146;FOXL1:-0.921648634383;BPTF:-0.930556369511;NR1H4:-0.944279266894;HMX1:-0.952791396134;SRF:-0.974045564037;RFX1:-1.02267964836;ZIC1..3:-1.02473799043;SMAD1..7,9:-1.02917880472;LHX3,4:-1.05166199408;TAL1_TCF{3,4,12}:-1.10292297993;EBF1:-1.12567613803;RREB1:-1.13282688099;EVI1:-1.14975124764;IKZF1:-1.15889813681;PATZ1:-1.18359768448;FOX{I1,J2}:-1.18903488846;STAT2,4,6:-1.19076553679;TFCP2:-1.19233849854;FOXD3:-1.20196433549;TLX1..3_NFIC{dimer}:-1.21262617753;SOX2:-1.21639302551;FOXM1:-1.27199353689;TEAD1:-1.29194953288;SPZ1:-1.29961538598;FOX{D1,D2}:-1.30209583367;JUN:-1.30430826595;NFATC1..3:-1.33454378043;MAZ:-1.37100109737;GLI1..3:-1.37132327652;ATF6:-1.45665287296;ALX4:-1.52435450717;TBX4,5:-1.5424170329;ZBTB6:-1.69612298263;NR3C1:-2.03273776278 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10764-110E8;search_select_hide=table117:FF:10764-110E8 | |||
}} | }} |
Latest revision as of 15:03, 3 June 2020
Name: | acute myeloid leukemia (FAB M5) cell line:NOMO-1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs13050 |
Sample type: | cell lines |
Genomic View: | UCSC |
RefEX: | Specific genes |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13050
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13050
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.272 |
10 | 10 | 0.0191 |
100 | 100 | 0.327 |
101 | 101 | 0.287 |
102 | 102 | 0.377 |
103 | 103 | 0.874 |
104 | 104 | 0.777 |
105 | 105 | 0.574 |
106 | 106 | 0.924 |
107 | 107 | 0.277 |
108 | 108 | 0.539 |
109 | 109 | 0.0701 |
11 | 11 | 0.331 |
110 | 110 | 0.754 |
111 | 111 | 0.35 |
112 | 112 | 0.163 |
113 | 113 | 0.684 |
114 | 114 | 0.954 |
115 | 115 | 0.164 |
116 | 116 | 0.879 |
117 | 117 | 0.101 |
118 | 118 | 0.222 |
119 | 119 | 0.762 |
12 | 12 | 0.489 |
120 | 120 | 0.559 |
121 | 121 | 0.852 |
122 | 122 | 0.369 |
123 | 123 | 0.0156 |
124 | 124 | 0.512 |
125 | 125 | 0.765 |
126 | 126 | 0.672 |
127 | 127 | 0.117 |
128 | 128 | 0.691 |
129 | 129 | 0.531 |
13 | 13 | 6.98667e-4 |
130 | 130 | 0.927 |
131 | 131 | 0.0304 |
132 | 132 | 0.559 |
133 | 133 | 0.673 |
134 | 134 | 0.467 |
135 | 135 | 0.668 |
136 | 136 | 0.128 |
137 | 137 | 0.264 |
138 | 138 | 0.413 |
139 | 139 | 0.633 |
14 | 14 | 0.772 |
140 | 140 | 0.41 |
141 | 141 | 0.401 |
142 | 142 | 0.922 |
143 | 143 | 0.864 |
144 | 144 | 0.808 |
145 | 145 | 0.356 |
146 | 146 | 0.623 |
147 | 147 | 0.363 |
148 | 148 | 0.558 |
149 | 149 | 0.304 |
15 | 15 | 0.707 |
150 | 150 | 0.784 |
151 | 151 | 0.905 |
152 | 152 | 0.439 |
153 | 153 | 0.901 |
154 | 154 | 0.482 |
155 | 155 | 0.0587 |
156 | 156 | 0.933 |
157 | 157 | 0.243 |
158 | 158 | 0.628 |
159 | 159 | 0.884 |
16 | 16 | 0.458 |
160 | 160 | 0.591 |
161 | 161 | 0.121 |
162 | 162 | 0.907 |
163 | 163 | 0.532 |
164 | 164 | 0.587 |
165 | 165 | 0.399 |
166 | 166 | 0.266 |
167 | 167 | 0.123 |
168 | 168 | 0.424 |
169 | 169 | 0.257 |
17 | 17 | 0.817 |
18 | 18 | 0.619 |
19 | 19 | 0.975 |
2 | 2 | 0.0981 |
20 | 20 | 0.243 |
21 | 21 | 0.161 |
22 | 22 | 0.482 |
23 | 23 | 0.0194 |
24 | 24 | 0.355 |
25 | 25 | 0.207 |
26 | 26 | 0.364 |
27 | 27 | 1 |
28 | 28 | 0.796 |
29 | 29 | 0.503 |
3 | 3 | 0.21 |
30 | 30 | 0.0398 |
31 | 31 | 0.0991 |
32 | 32 | 0.0472 |
33 | 33 | 0.491 |
34 | 34 | 0.766 |
35 | 35 | 0.803 |
36 | 36 | 0.102 |
37 | 37 | 0.702 |
38 | 38 | 0.386 |
39 | 39 | 0.341 |
4 | 4 | 0.0363 |
40 | 40 | 0.0597 |
41 | 41 | 0.879 |
42 | 42 | 0.682 |
43 | 43 | 0.724 |
44 | 44 | 0.906 |
45 | 45 | 0.234 |
46 | 46 | 0.912 |
47 | 47 | 0.295 |
48 | 48 | 0.385 |
49 | 49 | 0.347 |
5 | 5 | 0.438 |
50 | 50 | 0.781 |
51 | 51 | 0.775 |
52 | 52 | 0.59 |
53 | 53 | 0.235 |
54 | 54 | 0.48 |
55 | 55 | 0.867 |
56 | 56 | 0.642 |
57 | 57 | 0.419 |
58 | 58 | 0.0575 |
59 | 59 | 0.505 |
6 | 6 | 0.982 |
60 | 60 | 0.639 |
61 | 61 | 0.122 |
62 | 62 | 0.198 |
63 | 63 | 0.387 |
64 | 64 | 0.804 |
65 | 65 | 0.291 |
66 | 66 | 0.00398 |
67 | 67 | 0.822 |
68 | 68 | 0.605 |
69 | 69 | 0.863 |
7 | 7 | 0.0688 |
70 | 70 | 0.473 |
71 | 71 | 0.051 |
72 | 72 | 0.227 |
73 | 73 | 0.463 |
74 | 74 | 0.892 |
75 | 75 | 0.0811 |
76 | 76 | 0.278 |
77 | 77 | 0.0579 |
78 | 78 | 0.0591 |
79 | 79 | 0.18 |
8 | 8 | 0.579 |
80 | 80 | 0.608 |
81 | 81 | 0.489 |
82 | 82 | 0.132 |
83 | 83 | 0.234 |
84 | 84 | 0.513 |
85 | 85 | 0.149 |
86 | 86 | 0.665 |
87 | 87 | 0.0286 |
88 | 88 | 0.425 |
89 | 89 | 0.122 |
9 | 9 | 0.773 |
90 | 90 | 0.384 |
91 | 91 | 0.316 |
92 | 92 | 0.34 |
93 | 93 | 0.89 |
94 | 94 | 0.661 |
95 | 95 | 0.0581 |
96 | 96 | 0.91 |
97 | 97 | 0.57 |
98 | 98 | 0.363 |
99 | 99 | 0.0288 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13050
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0101883 acute myeloid leukemia cell line sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
8692 (myeloid leukemia)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0101883 (acute myeloid leukemia cell line sample)
0100740 (myeloid leukemia cell line sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)