FF:10783-110G9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468 | |DRA_sample_Accession=CAGE@SAMD00005528 | ||
|accession_numbers=CAGE;DRX008026;DRR008898;DRZ000323;DRZ001708;DRZ011673;DRZ013058 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002046,UBERON:0004119,UBERON:0010314,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002368,UBERON:0002530,UBERON:0010317,UBERON:0000949 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0101610 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr2:114036488..114036504,-!p1@PAX8!1.78!58.76!PAX8;;chr15:83953397..83953425,-!p1@BNC1!1.46!32.18!BNC1;;chr2:60780607..60780624,-!p2@BCL11A!1.34!63.24!BCL11A;;chr20:50179368..50179392,-!p2@NFATC2!1.33!26.35!NFATC2;;chr4:57522166..57522260,-!p2@HOPX!1.30!21.87!HOPX;;chr9:100615499..100615519,+!p1@FOXE1!1.29!18.61!FOXE1;;chr6:34204921..34204939,+!p3@HMGA1!1.22!463.67!HMGA1;;chr4:57522598..57522664,-!p3@HOPX!1.13!12.45!HOPX;;chr20:42543441..42543497,+!p1@TOX2!1.12!54.94!TOX2;;chr19:45908292..45908374,-!p1@PPP1R13L!1.11!105.07!PPP1R13L;;chr2:60780753..60780800,-!p1@BCL11A!1.08!54.61!BCL11A;;chr11:65667884..65667895,-!p2@FOSL1!1.08!43.06!FOSL1;;chr8:106330656..106330684,+!p1@ZFPM2!1.08!29.38!ZFPM2;;chr12:77459306..77459365,-!p1@E2F7!1.06!133.21!E2F7;;chr17:8027418..8027432,-!p1@HES7!1.04!9.87!HES7;;chrY:21906594..21906622,-!p1@KDM5D!1.03!9.64!KDM5D;;chr13:73633131..73633149,+!p1@KLF5!1.01!101.48!KLF5;;chrY:2803415..2803468,+!p1@ZFY!1.00!9.08!ZFY;;chr3:25470156..25470227,+!p2@RARB!1.00!8.97!RARB;;chr5:50679228..50679288,+!p1@ISL1!0.98!8.63!ISL1;;chr5:2751762..2751784,-!p1@IRX2!0.98!8.52!IRX2;;chr3:25469724..25469773,+!p1@RARB!0.96!11.77!RARB;;chr11:65667846..65667868,-!p1@FOSL1!0.95!213.84!FOSL1;;chr14:36989427..36989442,-!p1@NKX2-1!0.95!7.96!NKX2-1;;chr3:24536253..24536328,-!p1@THRB!0.93!14.69!THRB;;chr19:45971246..45971265,+!p1@FOSB!0.91!137.47!FOSB;;chr4:57522674..57522699,-!p5@HOPX!0.91!7.06!HOPX;;chr19:53496768..53496799,-!p1@ZNF702P!0.90!11.10!ZNF702P;;chr3:32023232..32023273,+!p1@ZNF860!0.90!10.09!ZNF860;;chr6:10415276..10415341,-!p2@TFAP2A!0.90!8.52!TFAP2A;;chr9:14314131..14314147,-!p2@NFIB!0.89!39.47!NFIB;;chrX:55620497..55620512,+!p@chrX:55620497..55620512,+!0.89!6.73!FOXR2;;chr11:46299199..46299233,+!p1@CREB3L1!0.88!35.66!CREB3L1;;chr20:42543506..42543549,+!p2@TOX2!0.88!16.48!TOX2;;chr15:67418119..67418162,+!p5@SMAD3!0.88!7.40!SMAD3;;chr8:67525443..67525459,-!p2@MYBL1!0.87!9.87!MYBL1;;chr14:36989358..36989378,-!p3@NKX2-1!0.86!6.28!NKX2-1;;chrX:66763856..66763896,+!p1@AR!0.84!8.86!AR;;chr8:106330696..106330719,+!p2@ZFPM2!0.83!7.40!ZFPM2;;chr4:53206..53260,+!p1@ZNF595,p1@ZNF718!0.80!54.50!ZNF595;;chr17:17726907..17726958,-!p2@SREBF1!0.80!35.88!SREBF1;;chr12:80084167..80084197,-!p5@PAWR!0.80!13.23!PAWR;;chr4:57522513..57522548,-!p4@HOPX!0.80!5.38!HOPX;;chr5:321810..321877,+!p1@AHRR!0.78!17.16!AHRR;;chr11:120107344..120107351,+!p1@POU2F3!0.77!6.06!POU2F3;;chr14:33403881..33403924,+!p1@NPAS3!0.77!4.93!NPAS3;;chr20:30433396..30433414,-!p1@FOXS1!0.77!4.93!FOXS1;;chr7:63505799..63505904,+!p1@ZNF727!0.77!4.82!ZNF727;;chr17:7590797..7590815,-!p1@TP53!0.76!228.97!TP53;;chr11:65686732..65686756,+!p2@DRAP1!0.76!21.98!DRAP1;;chr11:46299539..46299620,+!p2@CREB3L1!0.76!8.52!CREB3L1;;chr11:31832658..31832681,-!p1@PAX6!0.76!4.71!PAX6;;chr15:96869255..96869291,+!p6@NR2F2!0.75!8.86!NR2F2;;chr15:83953373..83953386,-!p2@BNC1!0.75!4.60!BNC1;;chr4:109089095..109089144,-!p6@LEF1!0.75!4.60!LEF1;;chr15:67418047..67418093,+!p4@SMAD3!0.74!5.83!SMAD3;;chr3:24536332..24536358,-!p2@THRB!0.74!4.49!THRB;;chr17:41622765..41622821,-!p2@ETV4!0.73!6.95!ETV4;;chr3:169381420..169381535,-!p1@MECOM!0.73!5.27!MECOM;;chr17:41622731..41622764,-!p5@ETV4!0.73!4.37!ETV4;;chr19:22605136..22605154,-!p1@ZNF98!0.73!4.37!ZNF98;;chr6:34204672..34204692,+!p1@HMGA1!0.72!542.61!HMGA1;;chr19:22817119..22817145,+!p1@ZNF492!0.72!7.51!ZNF492;;chr3:25469815..25469866,+!p3@RARB!0.72!4.26!RARB;;chr11:65686802..65686818,+!p6@DRAP1!0.71!7.74!DRAP1;;chr10:28032421..28032494,-!p2@MKX!0.71!4.15!MKX;;chr14:36989379..36989390,-!p8@NKX2-1!0.71!4.15!NKX2-1;;chr19:46271505..46271575,-!p2@SIX5!0.70!11.21!SIX5;;chr1:59249645..59249656,-!p4@JUN!0.70!11.10!JUN;;chr5:150284532..150284549,-!p1@ZNF300!0.70!8.97!ZNF300;;chr13:72441315..72441454,-!p1@DACH1!0.70!8.75!DACH1;;chr17:7388010..7388017,-!p5@ZBTB4!0.70!7.18!ZBTB4;;chr3:24536485..24536500,-!p3@THRB!0.70!4.04!THRB;;chr20:55204351..55204377,+!p1@TFAP2C!0.69!5.16!TFAP2C;;chr8:93115584..93115642,-!p5@RUNX1T1!0.69!3.92!RUNX1T1;;chr9:127533519..127533573,-!p2@NR6A1!0.67!4.60!NR6A1;;chr17:5015129..5015187,-!p1@ZNF232!0.66!21.98!ZNF232;;chr12:26277956..26277980,-!p1@BHLHE41!0.66!14.69!BHLHE41;;chr9:14314106..14314119,-!p5@NFIB!0.66!6.95!NFIB;;chr4:109088940..109089037,-!p4@LEF1!0.66!3.59!LEF1;;chr12:80084737..80084763,-!p3@PAWR!0.65!14.80!PAWR;;chr15:96875657..96875760,+!p14@NR2F2!0.65!6.17!NR2F2;;chr19:13136057..13136085,+!p11@NFIX!0.65!3.48!NFIX;;chr12:115121962..115121987,-!p1@TBX3!0.64!32.85!TBX3;;chr18:3448455..3448480,+!p5@TGIF1!0.64!6.84!TGIF1;;chr9:14313893..14313908,-!p7@NFIB!0.64!5.16!NFIB;;chrX:55620469..55620479,+!p@chrX:55620469..55620479,+!0.64!3.36!FOXR2;;chr19:58545454..58545498,+!p1@ZSCAN1!0.64!3.36!ZSCAN1;;chr14:36989336..36989354,-!p5@NKX2-1!0.64!3.36!NKX2-1;;chr5:176738887..176738934,-!p1@MXD3!0.63!25.34!MXD3;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!0.63!7.96!SOHLH2;;chr20:50159198..50159299,-!p1@NFATC2!0.63!5.16!NFATC2;;chr5:43067636..43067674,+!p6@ZNF131!0.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| |expression_enrichment_score=chr2:114036488..114036504,-!p1@PAX8!1.78!58.76!PAX8;;chr15:83953397..83953425,-!p1@BNC1!1.46!32.18!BNC1;;chr2:60780607..60780624,-!p2@BCL11A!1.34!63.24!BCL11A;;chr20:50179368..50179392,-!p2@NFATC2!1.33!26.35!NFATC2;;chr4:57522166..57522260,-!p2@HOPX!1.30!21.87!HOPX;;chr9:100615499..100615519,+!p1@FOXE1!1.29!18.61!FOXE1;;chr6:34204921..34204939,+!p3@HMGA1!1.22!463.67!HMGA1;;chr4:57522598..57522664,-!p3@HOPX!1.13!12.45!HOPX;;chr20:42543441..42543497,+!p1@TOX2!1.12!54.94!TOX2;;chr19:45908292..45908374,-!p1@PPP1R13L!1.11!105.07!PPP1R13L;;chr2:60780753..60780800,-!p1@BCL11A!1.08!54.61!BCL11A;;chr11:65667884..65667895,-!p2@FOSL1!1.08!43.06!FOSL1;;chr8:106330656..106330684,+!p1@ZFPM2!1.08!29.38!ZFPM2;;chr12:77459306..77459365,-!p1@E2F7!1.06!133.21!E2F7;;chr17:8027418..8027432,-!p1@HES7!1.04!9.87!HES7;;chrY:21906594..21906622,-!p1@KDM5D!1.03!9.64!KDM5D;;chr13:73633131..73633149,+!p1@KLF5!1.01!101.48!KLF5;;chrY:2803415..2803468,+!p1@ZFY!1.00!9.08!ZFY;;chr3:25470156..25470227,+!p2@RARB!1.00!8.97!RARB;;chr5:50679228..50679288,+!p1@ISL1!0.98!8.63!ISL1;;chr5:2751762..2751784,-!p1@IRX2!0.98!8.52!IRX2;;chr3:25469724..25469773,+!p1@RARB!0.96!11.77!RARB;;chr11:65667846..65667868,-!p1@FOSL1!0.95!213.84!FOSL1;;chr14:36989427..36989442,-!p1@NKX2-1!0.95!7.96!NKX2-1;;chr3:24536253..24536328,-!p1@THRB!0.93!14.69!THRB;;chr19:45971246..45971265,+!p1@FOSB!0.91!137.47!FOSB;;chr4:57522674..57522699,-!p5@HOPX!0.91!7.06!HOPX;;chr19:53496768..53496799,-!p1@ZNF702P!0.90!11.10!ZNF702P;;chr3:32023232..32023273,+!p1@ZNF860!0.90!10.09!ZNF860;;chr6:10415276..10415341,-!p2@TFAP2A!0.90!8.52!TFAP2A;;chr9:14314131..14314147,-!p2@NFIB!0.89!39.47!NFIB;;chrX:55620497..55620512,+!p@chrX:55620497..55620512,+!0.89!6.73!FOXR2;;chr11:46299199..46299233,+!p1@CREB3L1!0.88!35.66!CREB3L1;;chr20:42543506..42543549,+!p2@TOX2!0.88!16.48!TOX2;;chr15:67418119..67418162,+!p5@SMAD3!0.88!7.40!SMAD3;;chr8:67525443..67525459,-!p2@MYBL1!0.87!9.87!MYBL1;;chr14:36989358..36989378,-!p3@NKX2-1!0.86!6.28!NKX2-1;;chrX:66763856..66763896,+!p1@AR!0.84!8.86!AR;;chr8:106330696..106330719,+!p2@ZFPM2!0.83!7.40!ZFPM2;;chr4:53206..53260,+!p1@ZNF595,p1@ZNF718!0.80!54.50!ZNF595;;chr17:17726907..17726958,-!p2@SREBF1!0.80!35.88!SREBF1;;chr12:80084167..80084197,-!p5@PAWR!0.80!13.23!PAWR;;chr4:57522513..57522548,-!p4@HOPX!0.80!5.38!HOPX;;chr5:321810..321877,+!p1@AHRR!0.78!17.16!AHRR;;chr11:120107344..120107351,+!p1@POU2F3!0.77!6.06!POU2F3;;chr14:33403881..33403924,+!p1@NPAS3!0.77!4.93!NPAS3;;chr20:30433396..30433414,-!p1@FOXS1!0.77!4.93!FOXS1;;chr7:63505799..63505904,+!p1@ZNF727!0.77!4.82!ZNF727;;chr17:7590797..7590815,-!p1@TP53!0.76!228.97!TP53;;chr11:65686732..65686756,+!p2@DRAP1!0.76!21.98!DRAP1;;chr11:46299539..46299620,+!p2@CREB3L1!0.76!8.52!CREB3L1;;chr11:31832658..31832681,-!p1@PAX6!0.76!4.71!PAX6;;chr15:96869255..96869291,+!p6@NR2F2!0.75!8.86!NR2F2;;chr15:83953373..83953386,-!p2@BNC1!0.75!4.60!BNC1;;chr4:109089095..109089144,-!p6@LEF1!0.75!4.60!LEF1;;chr15:67418047..67418093,+!p4@SMAD3!0.74!5.83!SMAD3;;chr3:24536332..24536358,-!p2@THRB!0.74!4.49!THRB;;chr17:41622765..41622821,-!p2@ETV4!0.73!6.95!ETV4;;chr3:169381420..169381535,-!p1@MECOM!0.73!5.27!MECOM;;chr17:41622731..41622764,-!p5@ETV4!0.73!4.37!ETV4;;chr19:22605136..22605154,-!p1@ZNF98!0.73!4.37!ZNF98;;chr6:34204672..34204692,+!p1@HMGA1!0.72!542.61!HMGA1;;chr19:22817119..22817145,+!p1@ZNF492!0.72!7.51!ZNF492;;chr3:25469815..25469866,+!p3@RARB!0.72!4.26!RARB;;chr11:65686802..65686818,+!p6@DRAP1!0.71!7.74!DRAP1;;chr10:28032421..28032494,-!p2@MKX!0.71!4.15!MKX;;chr14:36989379..36989390,-!p8@NKX2-1!0.71!4.15!NKX2-1;;chr19:46271505..46271575,-!p2@SIX5!0.70!11.21!SIX5;;chr1:59249645..59249656,-!p4@JUN!0.70!11.10!JUN;;chr5:150284532..150284549,-!p1@ZNF300!0.70!8.97!ZNF300;;chr13:72441315..72441454,-!p1@DACH1!0.70!8.75!DACH1;;chr17:7388010..7388017,-!p5@ZBTB4!0.70!7.18!ZBTB4;;chr3:24536485..24536500,-!p3@THRB!0.70!4.04!THRB;;chr20:55204351..55204377,+!p1@TFAP2C!0.69!5.16!TFAP2C;;chr8:93115584..93115642,-!p5@RUNX1T1!0.69!3.92!RUNX1T1;;chr9:127533519..127533573,-!p2@NR6A1!0.67!4.60!NR6A1;;chr17:5015129..5015187,-!p1@ZNF232!0.66!21.98!ZNF232;;chr12:26277956..26277980,-!p1@BHLHE41!0.66!14.69!BHLHE41;;chr9:14314106..14314119,-!p5@NFIB!0.66!6.95!NFIB;;chr4:109088940..109089037,-!p4@LEF1!0.66!3.59!LEF1;;chr12:80084737..80084763,-!p3@PAWR!0.65!14.80!PAWR;;chr15:96875657..96875760,+!p14@NR2F2!0.65!6.17!NR2F2;;chr19:13136057..13136085,+!p11@NFIX!0.65!3.48!NFIX;;chr12:115121962..115121987,-!p1@TBX3!0.64!32.85!TBX3;;chr18:3448455..3448480,+!p5@TGIF1!0.64!6.84!TGIF1;;chr9:14313893..14313908,-!p7@NFIB!0.64!5.16!NFIB;;chrX:55620469..55620479,+!p@chrX:55620469..55620479,+!0.64!3.36!FOXR2;;chr19:58545454..58545498,+!p1@ZSCAN1!0.64!3.36!ZSCAN1;;chr14:36989336..36989354,-!p5@NKX2-1!0.64!3.36!NKX2-1;;chr5:176738887..176738934,-!p1@MXD3!0.63!25.34!MXD3;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!0.63!7.96!SOHLH2;;chr20:50159198..50159299,-!p1@NFATC2!0.63!5.16!NFATC2;;chr5:43067636..43067674,+!p6@ZNF131!0.63!4.71!ZNF131;;chr14:37131058..37131139,+!p1@PAX9!0.63!3.25!PAX9;;chr19:13135582..13135600,+!p3@NFIX!0.63!3.25!NFIX;;chr20:32274179..32274213,-!p1@E2F1!0.62!24.89!E2F1;;chr11:65687362..65687436,+!p3@DRAP1!0.62!16.82!DRAP1;;chr5:138647473..138647476,+!p6@MATR3!0.62!9.19!MATR3;;chr9:99180617..99180658,-!p1@ZNF367!0.62!7.74!ZNF367;;chr19:9811125..9811144,-!p2@ZNF812!0.62!3.14!ZNF812;;chr15:96874012..96874042,+!p2@NR2F2!0.61!32.85!NR2F2;;chr12:80084303..80084332,-!p1@PAWR!0.61!21.42!PAWR;;chr3:114343768..114343822,-!p1@ZBTB20!0.61!15.81!ZBTB20;;chr20:31350184..31350200,+!p1@DNMT3B!0.61!7.18!DNMT3B;;chr5:134369905..134369972,-!p1@PITX1!0.61!5.16!PITX1;;chr14:36988564..36988601,-!p7@NKX2-1!0.61!3.03!NKX2-1;;chr19:12203100..12203132,+!p1@ZNF788!0.60!6.73!ZNF788;;chr10:8096772..8096787,+!p2@GATA3!0.60!3.70!GATA3;;chr17:17740287..17740307,-!p1@SREBF1!0.59!92.17!SREBF1;;chr6:31126291..31126399,+!p1@TCF19!0.59!33.19!TCF19;;chr1:59249688..59249703,-!p3@JUN!0.59!21.08!JUN;;chr10:94449703..94449718,+!p1@HHEX!0.59!13.12!HHEX;;chr9:14314066..14314075,-!p11@NFIB!0.59!2.92!NFIB;;chr17:41277372..41277418,-!p1@BRCA1!0.58!12.11!BRCA1;;chr3:21792585..21792625,-!p2@ZNF385D!0.58!3.25!ZNF385D;;chr10:28034739..28034756,-!p1@MKX!0.58!2.80!MKX;;chr17:41622925..41622976,-!p3@ETV4!0.57!4.37!ETV4;;chr6:32095523..32095564,-!p2@ATF6B!0.57!3.92!ATF6B;;chr12:80084137..80084165,-!p10@PAWR!0.57!3.70!PAWR;;chr14:36989940..36989957,-!p2@NKX2-1!0.57!2.69!NKX2-1;;chr3:24536231..24536249,-!p4@THRB!0.57!2.69!THRB;;chr14:62162285..62162296,+!p3@HIF1A!0.56!16.71!HIF1A;;chr1:41827095..41827155,+!p1@FOXO6!0.56!3.81!FOXO6;;chr19:48774586..48774670,+!p1@ZNF114!0.56!3.48!ZNF114;;chr19:20278012..20278034,+!p1@ZNF486!0.55!26.80!ZNF486;;chr20:2489542..2489583,-!p1@ZNF343!0.55!21.53!ZNF343;;chr18:3450293..3450304,+!p4@TGIF1!0.55!7.40!TGIF1;;chr15:83953474..83953483,-!p3@BNC1!0.55!2.58!BNC1;;chr14:36989913..36989931,-!p6@NKX2-1!0.55!2.58!NKX2-1;;chr9:100616439..100616476,+!p3@FOXE1!0.55!2.58!FOXE1;;chr3:42947600..42947680,+!p1@ZNF662!0.54!3.92!ZNF662;;chr5:134369222..134369237,-!p8@PITX1!0.54!2.47!PITX1;;chr6:28321971..28321995,-!p1@ZNF323!0.54!2.47!ZNF323;;chr7:101917407..101917443,+!p3@CUX1!0.54!2.47!CUX1;;chr9:100615546..100615558,+!p4@FOXE1!0.54!2.47!FOXE1;;chr11:65688877..65688891,+!p13@DRAP1!0.54!2.47!DRAP1;;chr11:65686952..65686975,+!p5@DRAP1!0.53!16.48!DRAP1;;chr5:43120995..43121052,+!p1@ZNF131!0.53!15.14!ZNF131;;chr19:13134772..13134822,+!p2@NFIX!0.53!3.92!NFIX;;chr3:25470062..25470084,+!p4@RARB!0.53!2.35!RARB;;chr3:69788576..69788648,+!p1@MITF!0.52!15.47!MITF;;chr19:58400372..58400411,-!p1@ZNF814!0.52!15.25!ZNF814;;chr10:94449675..94449694,+!p2@HHEX!0.52!7.51!HHEX;;chr21:36421535..36421610,-!p2@RUNX1!0.51!9.98!RUNX1;;chr8:28243813..28243839,-!p4@ZNF395!0.51!4.60!ZNF395;;chr3:168864315..168864339,-!p2@MECOM!0.51!4.15!MECOM;;chr4:149363475..149363492,-!p2@NR3C2!0.51!2.24!NR3C2;;chr19:58740449..58740456,+!p3@ZNF544!0.51!2.24!ZNF544;;chr11:65668011..65668020,-!p3@FOSL1!0.51!2.24!FOSL1;;chr14:37051600..37051611,-!p2@NKX2-8!0.51!2.24!NKX2-8;;chr1:8938709..8938720,-!p3@ENO1!0.50!138.26!ENO1;;chr19:20188776..20188826,+!p1@ZNF90!0.50!7.06!ZNF90;;chr11:65687222..65687240,+!p7@DRAP1!0.50!3.03!DRAP1;;chr14:36988882..36988895,-!p13@NKX2-1!0.50!2.13!NKX2-1;;chr4:149366111..149366128,-!p7@NR3C2!0.50!2.13!NR3C2;;chr6:28321909..28321965,-!p3@ZNF323!0.50!2.13!ZNF323;;chr15:96869114..96869160,+!p11@NR2F2!0.49!3.14!NR2F2;;chrX:66763815..66763854,+!p2@AR!0.49!3.03!AR;;chr11:6947720..6947812,+!p1@ZNF215!0.49!2.92!ZNF215;;chr11:19263192..19263222,-!p2@E2F8!0.49!2.69!E2F8;;chr2:60778035..60778060,-!p4@BCL11A!0.49!2.69!BCL11A;;chr13:73636516..73636532,+!p3@KLF5!0.49!2.47!KLF5;;chr1:212782094..212782109,+!p1@ATF3!0.48!74.01!ATF3;;chr19:53193731..53193767,-!p1@ZNF83!0.48!24.11!ZNF83;;chr15:96873984..96873999,+!p3@NR2F2!0.48!19.85!NR2F2;;chr3:150126759..150126784,+!p2@TSC22D2!0.48!11.89!TSC22D2;;chr3:12329358..12329393,+!p3@PPARG!0.48!6.17!PPARG;;chr15:96874063..96874074,+!p10@NR2F2!0.48!4.37!NR2F2;;chr19:22605097..22605121,-!p2@ZNF98!0.48!2.02!ZNF98;;chr3:111314186..111314204,-!p1@ZBED2!0.48!2.02!ZBED2;;chr7:57509877..57509895,+!p1@ZNF716!0.48!2.02!ZNF716;;chr8:67525473..67525518,-!p1@MYBL1!0.47!5.49!MYBL1;;chr12:26277929..26277955,-!p3@BHLHE41!0.47!3.14!BHLHE41;;chr17:1958388..1958404,+!p1@HIC1!0.46!16.37!HIC1;;chr11:128392273..128392308,-!p2@ETS1!0.46!10.65!ETS1;;chr17:4890695..4890773,-!p2@CAMTA2!0.46!7.62!CAMTA2;;chr17:41623009..41623053,-!p4@ETV4!0.46!3.59!ETV4;;chr9:14082760..14082775,-!p6@NFIB!0.46!3.59!NFIB;;chr19:37464063..37464127,+!p2@ZNF568!0.46!2.69!ZNF568;;chrX:55620481..55620492,+!p@chrX:55620481..55620492,+!0.46!1.91!FOXR2;;chr8:93115508..93115552,-!p6@RUNX1T1!0.46!1.91!RUNX1T1;;chr12:80084120..80084136,-!p15@PAWR!0.46!1.91!PAWR;;chr14:36989412..36989423,-!p12@NKX2-1!0.46!1.91!NKX2-1;;chr2:95963052..95963106,+!p1@KCNIP3!0.46!1.91!KCNIP3;;chr3:141868293..141868355,-!p2@TFDP2!0.45!21.98!TFDP2;;chr3:141868357..141868393,-!p3@TFDP2!0.45!16.37!TFDP2;;chr5:92918894..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| ||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0007123,UBERON:0010316 | |||
|fonse_cell_line=FF:0101610 | |fonse_cell_line=FF:0101610 | ||
|fonse_cell_line_closure=FF:0101610 | |fonse_cell_line_closure=FF:0101610 | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/thyroid%2520carcinoma%2520cell%2520line%253aTCO-1.CNhs11872.10783-110G9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/thyroid%2520carcinoma%2520cell%2520line%253aTCO-1.CNhs11872.10783-110G9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/thyroid%2520carcinoma%2520cell%2520line%253aTCO-1.CNhs11872.10783-110G9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/thyroid%2520carcinoma%2520cell%2520line%253aTCO-1.CNhs11872.10783-110G9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/thyroid%2520carcinoma%2520cell%2520line%253aTCO-1.CNhs11872.10783-110G9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10783-110G9 | |id=FF:10783-110G9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0101610 | ||
|is_obsolete= | |||
|library_id=CNhs11872 | |||
|library_id_phase_based=2:CNhs11872 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10783 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10783 | |||
|name=thyroid carcinoma cell line:TCO-1 | |name=thyroid carcinoma cell line:TCO-1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11872,LSID830,release010,COMPLETED | |profile_hcage=CNhs11872,LSID830,release010,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0.00261594706164349,0,0,0,-0.114161746620937,0,-0.116435402477269,-0.0972782179867565,0,0,0,0.0461562834654493,0,0,0,0,0,0,0,0,0,0.149697297961973,0,0,0.0230781417327247,0,0,0.272292788912313,0,0,0.0904851389924632,0,0,0,0,0,0,0,0,0,0,0.0878749815719147,0,-0.0326115580921665,0.0878749815719147,0.0461562834654493,0,0,0,0,0,0,0.019722469673123,0,0,0,0,0,0.0358968524794802,0.0461562834654493,0.293539019872923,0,0,-0.00946864564118223,0,0,0,0,0,0,0,0,0.0461562834654493,0,0,0,0,0,0,0,0,0.136343127846582,0,0,0.00173399178270338,0.0145320116093064,0,0,-0.0239007384411123,0,0,0,-0.0584468268118252,-0.148229886147323,0,0.0878749815719147,0,0.251619495033887,0.0278996818593848,0.0049536806057725,0,0,0,0,0,0,0.0461562834654493,0,0,0,0,0,0,0,0,0,0,0.0153472704632017,0.19330810826772,0,0,-0.0551697773280274,-0.267649497039324,0,0,0.0461562834654493,0,0,0 | |||
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| |||
|rna_box=110 | |rna_box=110 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=58.86351 | |rna_weight_ug=58.86351 | ||
|sample_age=unknown | |sample_age=unknown | ||
|sample_category=cell lines | |||
|sample_cell_catalog=jcrb0239 | |sample_cell_catalog=jcrb0239 | ||
|sample_cell_line=TCO-1 | |sample_cell_line=TCO-1 | ||
| Line 77: | Line 99: | ||
|sample_tissue=thyroid | |sample_tissue=thyroid | ||
|top_motifs=NKX2-1,4:1.82611185439;ELK1,4_GABP{A,B1}:1.76532009911;TFDP1:1.45391933772;VSX1,2:1.19511573407;bHLH_family:1.13942418123;NKX3-1:1.13647567163;PAX6:1.09989403717;HBP1_HMGB_SSRP1_UBTF:0.960110376032;STAT1,3:0.904579553332;E2F1..5:0.904182588166;HIF1A:0.887450846179;ZNF143:0.843159384389;GFI1:0.832190964169;POU2F1..3:0.815848295114;NFY{A,B,C}:0.755175300602;ARID5B:0.696581751942;PITX1..3:0.604551626176;PPARG:0.598676310683;CDC5L:0.566367706569;POU1F1:0.560234802786;TEAD1:0.548218462788;FOXL1:0.544105809887;PAX5:0.513591959463;HIC1:0.481186270111;TLX1..3_NFIC{dimer}:0.471161821645;GCM1,2:0.458356860403;NRF1:0.449874101966;MTE{core}:0.443181676709;HOX{A4,D4}:0.428047297054;POU5F1:0.42468238825;FOXP1:0.419175960325;FOX{I1,J2}:0.416630923223;ZNF384:0.390348946393;YY1:0.367170963787;ELF1,2,4:0.357117638439;MYOD1:0.312527406868;AIRE:0.301001284214;TFAP2B:0.281218067218;NKX3-2:0.273605240349;AHR_ARNT_ARNT2:0.263195313472;NKX6-1,2:0.258720692691;RFX1:0.251204074194;EVI1:0.24553118808;TFAP2{A,C}:0.225591844914;GFI1B:0.218859937163;MYBL2:0.197335090136;FOX{D1,D2}:0.17812419836;POU3F1..4:0.1780310451;ONECUT1,2:0.173195541809;CDX1,2,4:0.169476698113;HMGA1,2:0.167584882822;ZNF148:0.166841966574;BREu{core}:0.155785736158;ZFP161:0.146483626606;XCPE1{core}:0.134142937778;PAX3,7:0.131742375801;EP300:0.129993944323;ZBTB16:0.128080052551;UFEwm:0.1264357631;HOXA9_MEIS1:0.125217693433;BACH2:0.124712193314;XBP1:0.122382169125;TP53:0.117093015048;FOXQ1:0.11705470723;PAX2:0.0885742042837;GLI1..3:0.0683952502997;FOS_FOS{B,L1}_JUN{B,D}:0.0648282432113;ZIC1..3:0.0636552764976;HOX{A5,B5}:0.0635775318946;SRF:0.060046253032;MTF1:0.0570665691456;MYB:0.0395504874072;ZBTB6:0.0357568480709;ADNP_IRX_SIX_ZHX:0.0252913894027;GTF2A1,2:0.0199170129195;LHX3,4:0.00660092427648;MAZ:-0.00329020400025;MEF2{A,B,C,D}:-0.00443330040647;SP1:-0.0180469628468;EGR1..3:-0.0430722216;FOXM1:-0.0482017580984;TEF:-0.0490913796561;NR6A1:-0.0631278068789;PRDM1:-0.0682158518929;TOPORS:-0.0710155489647;LEF1_TCF7_TCF7L1,2:-0.0728051591499;GATA4:-0.0776474976405;MED-1{core}:-0.0844755584202;FOSL2:-0.0907938564837;TBP:-0.0965660361623;EN1,2:-0.115544924769;GZF1:-0.117681169032;ATF4:-0.119187870223;NFE2:-0.127426076272;FOXA2:-0.131071523578;ATF5_CREB3:-0.158583437809;REST:-0.163337251835;POU6F1:-0.167459276701;PAX4:-0.192772526295;FOXO1,3,4:-0.208310178347;HLF:-0.225988993233;STAT2,4,6:-0.232722681809;NR3C1:-0.245619710147;STAT5{A,B}:-0.250910609959;MZF1:-0.252049600693;PAX1,9:-0.254181551429;SNAI1..3:-0.256043916216;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.258309113965;CEBPA,B_DDIT3:-0.267575923159;LMO2:-0.274985039543;KLF4:-0.281547106973;PDX1:-0.288950176611;SOX{8,9,10}:-0.292843034914;CREB1:-0.295227455055;NFATC1..3:-0.29654907284;IKZF2:-0.297756410035;RXRA_VDR{dimer}:-0.301767770732;IRF1,2:-0.301820391323;FOXD3:-0.310793923238;IKZF1:-0.311996984233;NFIL3:-0.315440665302;RXR{A,B,G}:-0.319483524036;TBX4,5:-0.326290208878;BPTF:-0.326731532595;NKX2-3_NKX2-5:-0.333612774307;DBP:-0.337481192859;PATZ1:-0.35123417806;SPI1:-0.357481314244;RREB1:-0.368589070516;ZEB1:-0.379497540119;HNF1A:-0.388954034846;GTF2I:-0.389696962545;RBPJ:-0.392886125439;HES1:-0.417026175796;IRF7:-0.421187740196;OCT4_SOX2{dimer}:-0.427779796983;ETS1,2:-0.428499350622;TFCP2:-0.429238313123;TFAP4:-0.432599547335;FOXN1:-0.435152321071;GATA6:-0.435748200433;NHLH1,2:-0.440125440531;AR:-0.443441110612;NFKB1_REL_RELA:-0.44538218093;SPIB:-0.449135681922;HNF4A_NR2F1,2:-0.451744125521;HOX{A6,A7,B6,B7}:-0.45248657193;RUNX1..3:-0.460846736117;SPZ1:-0.474806286253;SOX5:-0.477768869925;NANOG:-0.478878422586;NFIX:-0.502628100564;NKX2-2,8:-0.536916851022;SOX17:-0.543642736877;CUX2:-0.544151630145;MYFfamily:-0.564395677361;PRRX1,2:-0.567520648351;SREBF1,2:-0.572749600456;RFX2..5_RFXANK_RFXAP:-0.600227812154;HMX1:-0.610369999887;ALX4:-0.613540490412;ALX1:-0.621982707317;JUN:-0.686078244517;PAX8:-0.689675497609;DMAP1_NCOR{1,2}_SMARC:-0.717103452379;SOX2:-0.732849547387;TAL1_TCF{3,4,12}:-0.743048249909;NFE2L2:-0.745432173556;ATF2:-0.748665212278;CRX:-0.779120926339;TLX2:-0.786604578591;ATF6:-0.828816528207;T:-0.849311819389;ZNF423:-0.857332358926;EBF1:-0.875579790951;NR5A1,2:-0.879160077628;SMAD1..7,9:-0.889393876609;PBX1:-0.889539812478;NFE2L1:-0.955115363849;HSF1,2:-0.959299441157;FOXP3:-0.989729268671;MAFB:-1.02219421877;NR1H4:-1.02455358577;ZNF238:-1.03017405272;HAND1,2:-1.04652202993;ESRRA:-1.07026956115;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.09206098855;RORA:-1.24462324366;ESR1:-1.33855361898;NANOG{mouse}:-1.3979898548;TGIF1:-1.41341819801;FOX{F1,F2,J1}:-1.45571060634 | |top_motifs=NKX2-1,4:1.82611185439;ELK1,4_GABP{A,B1}:1.76532009911;TFDP1:1.45391933772;VSX1,2:1.19511573407;bHLH_family:1.13942418123;NKX3-1:1.13647567163;PAX6:1.09989403717;HBP1_HMGB_SSRP1_UBTF:0.960110376032;STAT1,3:0.904579553332;E2F1..5:0.904182588166;HIF1A:0.887450846179;ZNF143:0.843159384389;GFI1:0.832190964169;POU2F1..3:0.815848295114;NFY{A,B,C}:0.755175300602;ARID5B:0.696581751942;PITX1..3:0.604551626176;PPARG:0.598676310683;CDC5L:0.566367706569;POU1F1:0.560234802786;TEAD1:0.548218462788;FOXL1:0.544105809887;PAX5:0.513591959463;HIC1:0.481186270111;TLX1..3_NFIC{dimer}:0.471161821645;GCM1,2:0.458356860403;NRF1:0.449874101966;MTE{core}:0.443181676709;HOX{A4,D4}:0.428047297054;POU5F1:0.42468238825;FOXP1:0.419175960325;FOX{I1,J2}:0.416630923223;ZNF384:0.390348946393;YY1:0.367170963787;ELF1,2,4:0.357117638439;MYOD1:0.312527406868;AIRE:0.301001284214;TFAP2B:0.281218067218;NKX3-2:0.273605240349;AHR_ARNT_ARNT2:0.263195313472;NKX6-1,2:0.258720692691;RFX1:0.251204074194;EVI1:0.24553118808;TFAP2{A,C}:0.225591844914;GFI1B:0.218859937163;MYBL2:0.197335090136;FOX{D1,D2}:0.17812419836;POU3F1..4:0.1780310451;ONECUT1,2:0.173195541809;CDX1,2,4:0.169476698113;HMGA1,2:0.167584882822;ZNF148:0.166841966574;BREu{core}:0.155785736158;ZFP161:0.146483626606;XCPE1{core}:0.134142937778;PAX3,7:0.131742375801;EP300:0.129993944323;ZBTB16:0.128080052551;UFEwm:0.1264357631;HOXA9_MEIS1:0.125217693433;BACH2:0.124712193314;XBP1:0.122382169125;TP53:0.117093015048;FOXQ1:0.11705470723;PAX2:0.0885742042837;GLI1..3:0.0683952502997;FOS_FOS{B,L1}_JUN{B,D}:0.0648282432113;ZIC1..3:0.0636552764976;HOX{A5,B5}:0.0635775318946;SRF:0.060046253032;MTF1:0.0570665691456;MYB:0.0395504874072;ZBTB6:0.0357568480709;ADNP_IRX_SIX_ZHX:0.0252913894027;GTF2A1,2:0.0199170129195;LHX3,4:0.00660092427648;MAZ:-0.00329020400025;MEF2{A,B,C,D}:-0.00443330040647;SP1:-0.0180469628468;EGR1..3:-0.0430722216;FOXM1:-0.0482017580984;TEF:-0.0490913796561;NR6A1:-0.0631278068789;PRDM1:-0.0682158518929;TOPORS:-0.0710155489647;LEF1_TCF7_TCF7L1,2:-0.0728051591499;GATA4:-0.0776474976405;MED-1{core}:-0.0844755584202;FOSL2:-0.0907938564837;TBP:-0.0965660361623;EN1,2:-0.115544924769;GZF1:-0.117681169032;ATF4:-0.119187870223;NFE2:-0.127426076272;FOXA2:-0.131071523578;ATF5_CREB3:-0.158583437809;REST:-0.163337251835;POU6F1:-0.167459276701;PAX4:-0.192772526295;FOXO1,3,4:-0.208310178347;HLF:-0.225988993233;STAT2,4,6:-0.232722681809;NR3C1:-0.245619710147;STAT5{A,B}:-0.250910609959;MZF1:-0.252049600693;PAX1,9:-0.254181551429;SNAI1..3:-0.256043916216;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.258309113965;CEBPA,B_DDIT3:-0.267575923159;LMO2:-0.274985039543;KLF4:-0.281547106973;PDX1:-0.288950176611;SOX{8,9,10}:-0.292843034914;CREB1:-0.295227455055;NFATC1..3:-0.29654907284;IKZF2:-0.297756410035;RXRA_VDR{dimer}:-0.301767770732;IRF1,2:-0.301820391323;FOXD3:-0.310793923238;IKZF1:-0.311996984233;NFIL3:-0.315440665302;RXR{A,B,G}:-0.319483524036;TBX4,5:-0.326290208878;BPTF:-0.326731532595;NKX2-3_NKX2-5:-0.333612774307;DBP:-0.337481192859;PATZ1:-0.35123417806;SPI1:-0.357481314244;RREB1:-0.368589070516;ZEB1:-0.379497540119;HNF1A:-0.388954034846;GTF2I:-0.389696962545;RBPJ:-0.392886125439;HES1:-0.417026175796;IRF7:-0.421187740196;OCT4_SOX2{dimer}:-0.427779796983;ETS1,2:-0.428499350622;TFCP2:-0.429238313123;TFAP4:-0.432599547335;FOXN1:-0.435152321071;GATA6:-0.435748200433;NHLH1,2:-0.440125440531;AR:-0.443441110612;NFKB1_REL_RELA:-0.44538218093;SPIB:-0.449135681922;HNF4A_NR2F1,2:-0.451744125521;HOX{A6,A7,B6,B7}:-0.45248657193;RUNX1..3:-0.460846736117;SPZ1:-0.474806286253;SOX5:-0.477768869925;NANOG:-0.478878422586;NFIX:-0.502628100564;NKX2-2,8:-0.536916851022;SOX17:-0.543642736877;CUX2:-0.544151630145;MYFfamily:-0.564395677361;PRRX1,2:-0.567520648351;SREBF1,2:-0.572749600456;RFX2..5_RFXANK_RFXAP:-0.600227812154;HMX1:-0.610369999887;ALX4:-0.613540490412;ALX1:-0.621982707317;JUN:-0.686078244517;PAX8:-0.689675497609;DMAP1_NCOR{1,2}_SMARC:-0.717103452379;SOX2:-0.732849547387;TAL1_TCF{3,4,12}:-0.743048249909;NFE2L2:-0.745432173556;ATF2:-0.748665212278;CRX:-0.779120926339;TLX2:-0.786604578591;ATF6:-0.828816528207;T:-0.849311819389;ZNF423:-0.857332358926;EBF1:-0.875579790951;NR5A1,2:-0.879160077628;SMAD1..7,9:-0.889393876609;PBX1:-0.889539812478;NFE2L1:-0.955115363849;HSF1,2:-0.959299441157;FOXP3:-0.989729268671;MAFB:-1.02219421877;NR1H4:-1.02455358577;ZNF238:-1.03017405272;HAND1,2:-1.04652202993;ESRRA:-1.07026956115;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.09206098855;RORA:-1.24462324366;ESR1:-1.33855361898;NANOG{mouse}:-1.3979898548;TGIF1:-1.41341819801;FOX{F1,F2,J1}:-1.45571060634 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10783-110G9;search_select_hide=table117:FF:10783-110G9 | |||
}} | }} | ||
Latest revision as of 15:04, 3 June 2020
| Name: | thyroid carcinoma cell line:TCO-1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11872 |
| Sample type: | cell lines |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11872
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11872
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.249 |
| 10 | 10 | 0.671 |
| 100 | 100 | 0.41 |
| 101 | 101 | 0.678 |
| 102 | 102 | 0.959 |
| 103 | 103 | 0.084 |
| 104 | 104 | 0.941 |
| 105 | 105 | 0.0701 |
| 106 | 106 | 0.0413 |
| 107 | 107 | 0.117 |
| 108 | 108 | 0.859 |
| 109 | 109 | 0.682 |
| 11 | 11 | 0.159 |
| 110 | 110 | 0.575 |
| 111 | 111 | 0.12 |
| 112 | 112 | 0.0358 |
| 113 | 113 | 0.12 |
| 114 | 114 | 0.0182 |
| 115 | 115 | 0.79 |
| 116 | 116 | 0.592 |
| 117 | 117 | 0.446 |
| 118 | 118 | 0.641 |
| 119 | 119 | 0.0959 |
| 12 | 12 | 0.963 |
| 120 | 120 | 0.637 |
| 121 | 121 | 0.939 |
| 122 | 122 | 0.73 |
| 123 | 123 | 0.378 |
| 124 | 124 | 0.0199 |
| 125 | 125 | 0.903 |
| 126 | 126 | 0.718 |
| 127 | 127 | 0.638 |
| 128 | 128 | 0.00225 |
| 129 | 129 | 0.023 |
| 13 | 13 | 0.765 |
| 130 | 130 | 0.0744 |
| 131 | 131 | 0.533 |
| 132 | 132 | 0.774 |
| 133 | 133 | 0.214 |
| 134 | 134 | 0.177 |
| 135 | 135 | 0.111 |
| 136 | 136 | 0.116 |
| 137 | 137 | 0.168 |
| 138 | 138 | 0.522 |
| 139 | 139 | 8.94489e-5 |
| 14 | 14 | 0.361 |
| 140 | 140 | 0.165 |
| 141 | 141 | 0.0577 |
| 142 | 142 | 0.0521 |
| 143 | 143 | 0.103 |
| 144 | 144 | 0.875 |
| 145 | 145 | 0.311 |
| 146 | 146 | 0.406 |
| 147 | 147 | 0.989 |
| 148 | 148 | 0.0654 |
| 149 | 149 | 0.0589 |
| 15 | 15 | 0.143 |
| 150 | 150 | 0.826 |
| 151 | 151 | 0.294 |
| 152 | 152 | 0.477 |
| 153 | 153 | 0.634 |
| 154 | 154 | 0.549 |
| 155 | 155 | 0.334 |
| 156 | 156 | 0.22 |
| 157 | 157 | 0.173 |
| 158 | 158 | 0.0519 |
| 159 | 159 | 0.201 |
| 16 | 16 | 0.28 |
| 160 | 160 | 0.811 |
| 161 | 161 | 0.701 |
| 162 | 162 | 0.922 |
| 163 | 163 | 0.386 |
| 164 | 164 | 0.661 |
| 165 | 165 | 0.49 |
| 166 | 166 | 0.806 |
| 167 | 167 | 0.719 |
| 168 | 168 | 0.712 |
| 169 | 169 | 0.0199 |
| 17 | 17 | 0.118 |
| 18 | 18 | 0.14 |
| 19 | 19 | 0.104 |
| 2 | 2 | 0.212 |
| 20 | 20 | 0.217 |
| 21 | 21 | 0.359 |
| 22 | 22 | 0.151 |
| 23 | 23 | 0.0152 |
| 24 | 24 | 0.826 |
| 25 | 25 | 0.47 |
| 26 | 26 | 0.707 |
| 27 | 27 | 0.101 |
| 28 | 28 | 0.865 |
| 29 | 29 | 0.699 |
| 3 | 3 | 0.291 |
| 30 | 30 | 0.937 |
| 31 | 31 | 0.497 |
| 32 | 32 | 0.262 |
| 33 | 33 | 0.411 |
| 34 | 34 | 0.128 |
| 35 | 35 | 0.0752 |
| 36 | 36 | 0.836 |
| 37 | 37 | 0.208 |
| 38 | 38 | 0.378 |
| 39 | 39 | 0.867 |
| 4 | 4 | 0.698 |
| 40 | 40 | 0.795 |
| 41 | 41 | 0.0173 |
| 42 | 42 | 0.637 |
| 43 | 43 | 0.0874 |
| 44 | 44 | 0.378 |
| 45 | 45 | 0.251 |
| 46 | 46 | 0.128 |
| 47 | 47 | 0.282 |
| 48 | 48 | 0.609 |
| 49 | 49 | 0.0917 |
| 5 | 5 | 0.0473 |
| 50 | 50 | 0.893 |
| 51 | 51 | 0.248 |
| 52 | 52 | 0.11 |
| 53 | 53 | 0.62 |
| 54 | 54 | 0.271 |
| 55 | 55 | 0.248 |
| 56 | 56 | 0.281 |
| 57 | 57 | 0.574 |
| 58 | 58 | 0.287 |
| 59 | 59 | 0.0463 |
| 6 | 6 | 0.813 |
| 60 | 60 | 0.0861 |
| 61 | 61 | 0.753 |
| 62 | 62 | 0.0927 |
| 63 | 63 | 0.409 |
| 64 | 64 | 0.544 |
| 65 | 65 | 0.0552 |
| 66 | 66 | 0.063 |
| 67 | 67 | 0.979 |
| 68 | 68 | 0.56 |
| 69 | 69 | 0.482 |
| 7 | 7 | 0.303 |
| 70 | 70 | 0.336 |
| 71 | 71 | 0.23 |
| 72 | 72 | 0.28 |
| 73 | 73 | 0.505 |
| 74 | 74 | 0.568 |
| 75 | 75 | 0.196 |
| 76 | 76 | 0.462 |
| 77 | 77 | 0.197 |
| 78 | 78 | 0.384 |
| 79 | 79 | 0.209 |
| 8 | 8 | 0.556 |
| 80 | 80 | 0.0318 |
| 81 | 81 | 0.245 |
| 82 | 82 | 0.0178 |
| 83 | 83 | 0.53 |
| 84 | 84 | 0.5 |
| 85 | 85 | 0.0122 |
| 86 | 86 | 0.23 |
| 87 | 87 | 0.766 |
| 88 | 88 | 0.98 |
| 89 | 89 | 0.0399 |
| 9 | 9 | 0.181 |
| 90 | 90 | 0.177 |
| 91 | 91 | 0.347 |
| 92 | 92 | 0.0107 |
| 93 | 93 | 0.0588 |
| 94 | 94 | 0.138 |
| 95 | 95 | 0.533 |
| 96 | 96 | 0.127 |
| 97 | 97 | 0.724 |
| 98 | 98 | 0.528 |
| 99 | 99 | 0.44 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11872
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0101610 thyroid cancer cell line sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0002046 (thyroid gland)
0004119 (endoderm-derived structure)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002368 (endocrine gland)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0000949 (endocrine system)
FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0101610 (thyroid cancer cell line sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0007123 (pharyngeal pouch 2)
UBERON:0010316 (germ layer / neural crest)
