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{{f5samples
{{f5samples
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|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100737,FF:0101035,FF:0101883,FF:0100740
|comment=
|comment=
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|def=
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Line 35: Line 41:
|fonse_treatment_closure=
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|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M4eo%2529%2520cell%2520line%253aEoL-3.CNhs13057.10833-111D5.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/acute%2520myeloid%2520leukemia%2520%2528FAB%2520M4eo%2529%2520cell%2520line%253aEoL-3.CNhs13057.10833-111D5.hg38.nobarcode.bam
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|id=FF:10833-111D5
|id=FF:10833-111D5
|is_a=EFO:0002091;;FF:0000003;;FF:0000210;;FF:0101883
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|microRNAs=
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10833
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10833
|name=acute myeloid leukemia (FAB M4eo) cell line:EoL-3
|name=acute myeloid leukemia (FAB M4eo) cell line:EoL-3
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 60:
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|rna_catalog_number=
Line 57: Line 78:
|rna_weight_ug=108.7542
|rna_weight_ug=108.7542
|sample_age=unknown
|sample_age=unknown
|sample_category=cell lines
|sample_cell_catalog=RCB2142
|sample_cell_catalog=RCB2142
|sample_cell_line=EoL-3
|sample_cell_line=EoL-3
Line 69: Line 91:
|sample_ethnicity=unknown
|sample_ethnicity=unknown
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|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.086764920271e-272!GO:0043227;membrane-bound organelle;2.89386374872625e-240!GO:0043231;intracellular membrane-bound organelle;5.21661001346678e-240!GO:0043226;organelle;5.07252625316384e-228!GO:0043229;intracellular organelle;2.34236553827011e-227!GO:0044422;organelle part;5.87313523021125e-166!GO:0044446;intracellular organelle part;1.47763801821309e-164!GO:0005737;cytoplasm;5.69493261128218e-164!GO:0044237;cellular metabolic process;6.47067779807418e-123!GO:0044444;cytoplasmic part;1.46099319352098e-122!GO:0032991;macromolecular complex;1.13737898460313e-121!GO:0005634;nucleus;3.87582672136521e-118!GO:0044238;primary metabolic process;5.96137654430098e-118!GO:0043170;macromolecule metabolic process;5.70321738138321e-111!GO:0030529;ribonucleoprotein complex;1.4907848646696e-107!GO:0044428;nuclear part;3.55396704992835e-105!GO:0043233;organelle lumen;4.56346991221012e-99!GO:0031974;membrane-enclosed lumen;4.56346991221012e-99!GO:0003723;RNA binding;3.57545539024196e-93!GO:0005739;mitochondrion;3.71467966882658e-85!GO:0006396;RNA processing;1.14712075117026e-71!GO:0043283;biopolymer metabolic process;6.17844410990637e-70!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.57073667861281e-69!GO:0010467;gene expression;2.86011918147884e-65!GO:0006412;translation;2.35052943899828e-63!GO:0031981;nuclear lumen;1.09321226154851e-62!GO:0005840;ribosome;2.52525475147204e-59!GO:0043234;protein complex;3.47411485706629e-59!GO:0044429;mitochondrial part;8.44449785045582e-59!GO:0005515;protein binding;5.35823182851879e-54!GO:0016071;mRNA metabolic process;4.72513743800146e-53!GO:0031967;organelle envelope;4.87234093502899e-52!GO:0031975;envelope;7.58939518897739e-52!GO:0003735;structural constituent of ribosome;6.36228602818886e-51!GO:0006259;DNA metabolic process;6.47194969548777e-50!GO:0044249;cellular biosynthetic process;1.05339005342355e-49!GO:0019538;protein metabolic process;2.41457617046904e-49!GO:0009058;biosynthetic process;5.03837930486332e-48!GO:0009059;macromolecule biosynthetic process;2.76922640248797e-47!GO:0008380;RNA splicing;5.15955452415291e-47!GO:0006397;mRNA processing;2.43003663880383e-46!GO:0003676;nucleic acid binding;9.18230920554301e-46!GO:0031090;organelle membrane;2.00037058515096e-45!GO:0044267;cellular protein metabolic process;4.27819976335291e-45!GO:0044260;cellular macromolecule metabolic process;7.07125447159175e-45!GO:0033279;ribosomal subunit;1.42351166128168e-43!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.63277679963899e-43!GO:0033036;macromolecule localization;1.89443725271626e-42!GO:0016043;cellular component organization and biogenesis;4.8762166276299e-41!GO:0015031;protein transport;3.6870751074673e-39!GO:0005654;nucleoplasm;2.45558139515439e-38!GO:0006996;organelle organization and biogenesis;6.29377042395027e-38!GO:0045184;establishment of protein localization;1.10165041592362e-37!GO:0065003;macromolecular complex assembly;1.55344092825906e-37!GO:0008104;protein localization;2.01746795681083e-37!GO:0005829;cytosol;5.83571851544485e-37!GO:0005740;mitochondrial envelope;4.62607287924744e-36!GO:0043228;non-membrane-bound organelle;5.69489934890906e-35!GO:0043232;intracellular non-membrane-bound organelle;5.69489934890906e-35!GO:0005681;spliceosome;1.93856997511476e-34!GO:0019866;organelle inner membrane;2.3796879043546e-34!GO:0046907;intracellular transport;2.49481157850169e-33!GO:0031966;mitochondrial membrane;3.20528230501377e-33!GO:0022607;cellular component assembly;1.01386857150665e-32!GO:0016070;RNA metabolic process;1.73551206876069e-32!GO:0007049;cell cycle;3.54998059931176e-32!GO:0000166;nucleotide binding;4.39498779726858e-32!GO:0005743;mitochondrial inner membrane;2.17541194940843e-31!GO:0006974;response to DNA damage stimulus;7.66933928227898e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.06655242327258e-30!GO:0006886;intracellular protein transport;9.57466081507491e-30!GO:0044451;nucleoplasm part;1.0954484952187e-29!GO:0005694;chromosome;5.75382566174122e-29!GO:0006281;DNA repair;6.0343561283775e-28!GO:0044445;cytosolic part;2.2311515712377e-27!GO:0031980;mitochondrial lumen;2.8008220894998e-27!GO:0005759;mitochondrial matrix;2.8008220894998e-27!GO:0022402;cell cycle process;2.53633289674731e-26!GO:0044427;chromosomal part;1.01918675201143e-25!GO:0005730;nucleolus;1.28168285599242e-25!GO:0051649;establishment of cellular localization;1.64109481600797e-25!GO:0051641;cellular localization;7.60688872554165e-25!GO:0000278;mitotic cell cycle;1.9327179828677e-24!GO:0051276;chromosome organization and biogenesis;6.45566489167273e-24!GO:0006119;oxidative phosphorylation;1.54057568579818e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.73500167372547e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;6.07800322852625e-23!GO:0016462;pyrophosphatase activity;6.82742208052159e-23!GO:0015934;large ribosomal subunit;9.49487918555395e-23!GO:0016874;ligase activity;9.9693648563473e-23!GO:0022618;protein-RNA complex assembly;1.71353389212163e-22!GO:0044455;mitochondrial membrane part;2.68624637194568e-22!GO:0015935;small ribosomal subunit;6.64092503074909e-22!GO:0017111;nucleoside-triphosphatase activity;7.01546606933798e-22!GO:0005524;ATP binding;1.41792627000906e-21!GO:0017076;purine nucleotide binding;1.47957672969432e-21!GO:0032553;ribonucleotide binding;1.53472510747674e-21!GO:0032555;purine ribonucleotide binding;1.53472510747674e-21!GO:0042254;ribosome biogenesis and assembly;2.01405393122038e-21!GO:0006260;DNA replication;3.26610927943278e-21!GO:0032559;adenyl ribonucleotide binding;3.65439467559818e-21!GO:0044265;cellular macromolecule catabolic process;4.34733621122755e-21!GO:0022403;cell cycle phase;5.24573388986051e-21!GO:0030554;adenyl nucleotide binding;5.99809730840688e-21!GO:0000087;M phase of mitotic cell cycle;1.27039478857637e-20!GO:0007067;mitosis;3.25877705134488e-20!GO:0009719;response to endogenous stimulus;4.60883882335318e-20!GO:0006457;protein folding;4.98352955584414e-20!GO:0006512;ubiquitin cycle;4.39476776963161e-19!GO:0044248;cellular catabolic process;6.51144585454553e-19!GO:0042623;ATPase activity, coupled;1.15417024655338e-18!GO:0016887;ATPase activity;1.52781379291698e-18!GO:0000279;M phase;2.50841958853941e-18!GO:0005746;mitochondrial respiratory chain;2.82427912414503e-18!GO:0051301;cell division;3.46090304039934e-18!GO:0043285;biopolymer catabolic process;4.08232014687163e-18!GO:0006325;establishment and/or maintenance of chromatin architecture;5.68762759304587e-18!GO:0009057;macromolecule catabolic process;1.17581790207091e-17!GO:0008135;translation factor activity, nucleic acid binding;1.95059775980946e-17!GO:0006323;DNA packaging;2.55209265724023e-17!GO:0005761;mitochondrial ribosome;3.07287503107102e-17!GO:0000313;organellar ribosome;3.07287503107102e-17!GO:0000398;nuclear mRNA splicing, via spliceosome;3.44476535669087e-17!GO:0000375;RNA splicing, via transesterification reactions;3.44476535669087e-17!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.44476535669087e-17!GO:0044453;nuclear membrane part;5.80006589546992e-17!GO:0000502;proteasome complex (sensu Eukaryota);7.83582429858633e-17!GO:0051186;cofactor metabolic process;1.06098859517152e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.23353147526509e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.30509761514689e-16!GO:0005635;nuclear envelope;1.37556252475202e-16!GO:0006605;protein targeting;1.6099429396383e-16!GO:0019941;modification-dependent protein catabolic process;1.64173798791499e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.64173798791499e-16!GO:0016604;nuclear body;2.18962537909917e-16!GO:0048770;pigment granule;2.26482515907534e-16!GO:0042470;melanosome;2.26482515907534e-16!GO:0044257;cellular protein catabolic process;3.21428443178299e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.28432719137823e-16!GO:0031965;nuclear membrane;4.74716794086004e-16!GO:0050136;NADH dehydrogenase (quinone) activity;5.70320525174007e-16!GO:0003954;NADH dehydrogenase activity;5.70320525174007e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.70320525174007e-16!GO:0006399;tRNA metabolic process;6.31400663915527e-16!GO:0012505;endomembrane system;6.71506474652726e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.71734759617048e-16!GO:0004386;helicase activity;1.50352911069819e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.36315367104397e-15!GO:0050657;nucleic acid transport;5.48658209654438e-15!GO:0051236;establishment of RNA localization;5.48658209654438e-15!GO:0050658;RNA transport;5.48658209654438e-15!GO:0006364;rRNA processing;5.95083382415996e-15!GO:0006403;RNA localization;8.52007917461435e-15!GO:0043412;biopolymer modification;1.05200850162268e-14!GO:0016072;rRNA metabolic process;1.45663166149725e-14!GO:0008134;transcription factor binding;1.60928308387432e-14!GO:0042775;organelle ATP synthesis coupled electron transport;1.89392905857263e-14!GO:0042773;ATP synthesis coupled electron transport;1.89392905857263e-14!GO:0003743;translation initiation factor activity;2.68205365680322e-14!GO:0006913;nucleocytoplasmic transport;3.55920841758998e-14!GO:0051082;unfolded protein binding;3.89076738945787e-14!GO:0030964;NADH dehydrogenase complex (quinone);3.9191292605904e-14!GO:0045271;respiratory chain complex I;3.9191292605904e-14!GO:0005747;mitochondrial respiratory chain complex I;3.9191292605904e-14!GO:0006413;translational initiation;4.30799142614467e-14!GO:0006732;coenzyme metabolic process;6.56615237698136e-14!GO:0051169;nuclear transport;6.56615237698136e-14!GO:0008026;ATP-dependent helicase activity;8.17545026515772e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.24017480474326e-13!GO:0005643;nuclear pore;1.38659752665025e-13!GO:0000785;chromatin;2.51928571780566e-13!GO:0030163;protein catabolic process;2.7904959305816e-13!GO:0006446;regulation of translational initiation;3.23823373168604e-13!GO:0051726;regulation of cell cycle;3.8695313818378e-13!GO:0000074;regulation of progression through cell cycle;5.74722757630652e-13!GO:0016607;nuclear speck;5.74722757630652e-13!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.92968613434623e-13!GO:0016568;chromatin modification;6.67733166848278e-13!GO:0051028;mRNA transport;6.98666027536232e-13!GO:0044432;endoplasmic reticulum part;4.03712364572692e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.26435619567978e-12!GO:0006464;protein modification process;4.39551916158438e-12!GO:0006333;chromatin assembly or disassembly;6.61006046864527e-12!GO:0065002;intracellular protein transport across a membrane;7.91025808264458e-12!GO:0065004;protein-DNA complex assembly;1.17570352197992e-11!GO:0012501;programmed cell death;1.28018256173699e-11!GO:0046930;pore complex;1.33776750419326e-11!GO:0009259;ribonucleotide metabolic process;1.38119073411032e-11!GO:0006915;apoptosis;1.4558983194113e-11!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.89227469801563e-11!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.11082564288817e-11!GO:0004812;aminoacyl-tRNA ligase activity;2.11082564288817e-11!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.11082564288817e-11!GO:0006163;purine nucleotide metabolic process;2.54487501835598e-11!GO:0006261;DNA-dependent DNA replication;2.71984700013956e-11!GO:0009056;catabolic process;3.13225164777306e-11!GO:0043566;structure-specific DNA binding;3.91875511423398e-11!GO:0043038;amino acid activation;5.5525330856884e-11!GO:0006418;tRNA aminoacylation for protein translation;5.5525330856884e-11!GO:0043039;tRNA aminoacylation;5.5525330856884e-11!GO:0016779;nucleotidyltransferase activity;7.98346996070464e-11!GO:0017038;protein import;8.76378307617676e-11!GO:0008219;cell death;9.34710025563202e-11!GO:0016265;death;9.34710025563202e-11!GO:0006164;purine nucleotide biosynthetic process;9.48011950266791e-11!GO:0009055;electron carrier activity;1.0831393699826e-10!GO:0030532;small nuclear ribonucleoprotein complex;1.10525803703603e-10!GO:0003697;single-stranded DNA binding;1.25077804387182e-10!GO:0008565;protein transporter activity;1.4934173820767e-10!GO:0009260;ribonucleotide biosynthetic process;1.7493596834783e-10!GO:0043687;post-translational protein modification;2.23020373777538e-10!GO:0009150;purine ribonucleotide metabolic process;4.21356248707397e-10!GO:0005783;endoplasmic reticulum;4.5192919380607e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.59973114063096e-10!GO:0051188;cofactor biosynthetic process;8.09626460447171e-10!GO:0006461;protein complex assembly;8.79876338839312e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.0780684068707e-10!GO:0016787;hydrolase activity;1.16151023116213e-09!GO:0048193;Golgi vesicle transport;1.23900271622243e-09!GO:0009152;purine ribonucleotide biosynthetic process;1.60175003343803e-09!GO:0000775;chromosome, pericentric region;1.65064658431857e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.22570926901941e-09!GO:0003712;transcription cofactor activity;2.90943299193506e-09!GO:0008639;small protein conjugating enzyme activity;2.97133070501911e-09!GO:0009060;aerobic respiration;5.00437523191854e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.00437523191854e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.80450648353763e-09!GO:0004842;ubiquitin-protein ligase activity;8.28662219354192e-09!GO:0005789;endoplasmic reticulum membrane;9.4697569744051e-09!GO:0016740;transferase activity;1.29862564495266e-08!GO:0019787;small conjugating protein ligase activity;1.32752061869425e-08!GO:0019829;cation-transporting ATPase activity;1.33481801043318e-08!GO:0003899;DNA-directed RNA polymerase activity;1.44825664133965e-08!GO:0005819;spindle;1.65909685801967e-08!GO:0015986;ATP synthesis coupled proton transport;1.91431425751616e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.91431425751616e-08!GO:0007005;mitochondrion organization and biogenesis;3.89866682094607e-08!GO:0045333;cellular respiration;4.16770486872833e-08!GO:0009141;nucleoside triphosphate metabolic process;5.0733759380499e-08!GO:0009199;ribonucleoside triphosphate metabolic process;5.07423872883622e-08!GO:0016192;vesicle-mediated transport;5.37012980423683e-08!GO:0019222;regulation of metabolic process;6.11311528584688e-08!GO:0000245;spliceosome assembly;6.29659372609407e-08!GO:0006366;transcription from RNA polymerase II promoter;6.65046706703085e-08!GO:0005839;proteasome core complex (sensu Eukaryota);7.99363509779872e-08!GO:0050794;regulation of cellular process;8.56136638508774e-08!GO:0009108;coenzyme biosynthetic process;9.70673647438549e-08!GO:0031497;chromatin assembly;9.8077327672255e-08!GO:0009142;nucleoside triphosphate biosynthetic process;9.99081122677137e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.99081122677137e-08!GO:0006334;nucleosome assembly;9.99081122677137e-08!GO:0016881;acid-amino acid ligase activity;1.05500316081773e-07!GO:0005657;replication fork;1.06119482827126e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.11244977815811e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.11244977815811e-07!GO:0006084;acetyl-CoA metabolic process;1.12546820321801e-07!GO:0051246;regulation of protein metabolic process;1.17079258379365e-07!GO:0046034;ATP metabolic process;1.27173704819079e-07!GO:0006099;tricarboxylic acid cycle;1.28113859668755e-07!GO:0046356;acetyl-CoA catabolic process;1.28113859668755e-07!GO:0032446;protein modification by small protein conjugation;1.41702737432528e-07!GO:0009117;nucleotide metabolic process;1.45117715628888e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.54300457132733e-07!GO:0051170;nuclear import;1.77633030729236e-07!GO:0005813;centrosome;1.7872539134785e-07!GO:0006754;ATP biosynthetic process;1.7951958343579e-07!GO:0006753;nucleoside phosphate metabolic process;1.7951958343579e-07!GO:0008094;DNA-dependent ATPase activity;1.99214778237358e-07!GO:0005794;Golgi apparatus;2.07104811510624e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.21655408147808e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.25911102828076e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.25911102828076e-07!GO:0003724;RNA helicase activity;3.04530205256013e-07!GO:0016567;protein ubiquitination;3.04851990405076e-07!GO:0000075;cell cycle checkpoint;3.06106697573368e-07!GO:0016469;proton-transporting two-sector ATPase complex;3.12837512543078e-07!GO:0005815;microtubule organizing center;3.1819394434207e-07!GO:0042981;regulation of apoptosis;3.60158692281971e-07!GO:0048475;coated membrane;3.88383784008699e-07!GO:0030117;membrane coat;3.88383784008699e-07!GO:0006606;protein import into nucleus;3.96387910923522e-07!GO:0016741;transferase activity, transferring one-carbon groups;4.02806120765354e-07!GO:0008168;methyltransferase activity;4.56660371957783e-07!GO:0004298;threonine endopeptidase activity;4.96452328713825e-07!GO:0043067;regulation of programmed cell death;5.20854963475285e-07!GO:0006401;RNA catabolic process;5.40438809720486e-07!GO:0006752;group transfer coenzyme metabolic process;5.81780057386367e-07!GO:0005793;ER-Golgi intermediate compartment;6.3278697555229e-07!GO:0003713;transcription coactivator activity;6.3646945158107e-07!GO:0015630;microtubule cytoskeleton;7.00937577266924e-07!GO:0016491;oxidoreductase activity;7.19262698280051e-07!GO:0009109;coenzyme catabolic process;7.73283807964038e-07!GO:0003690;double-stranded DNA binding;7.74419423727925e-07!GO:0051168;nuclear export;7.89692896339615e-07!GO:0051329;interphase of mitotic cell cycle;8.11584070854843e-07!GO:0016363;nuclear matrix;8.51338674709178e-07!GO:0045259;proton-transporting ATP synthase complex;9.97153442421336e-07!GO:0044452;nucleolar part;1.10688721592021e-06!GO:0005773;vacuole;1.17180551811934e-06!GO:0031323;regulation of cellular metabolic process;1.26105896988379e-06!GO:0051325;interphase;1.26105896988379e-06!GO:0005667;transcription factor complex;1.57361558655131e-06!GO:0007051;spindle organization and biogenesis;1.634293254883e-06!GO:0043623;cellular protein complex assembly;1.82969082618227e-06!GO:0006310;DNA recombination;2.14803677950892e-06!GO:0006793;phosphorus metabolic process;2.32889712284413e-06!GO:0006796;phosphate metabolic process;2.32889712284413e-06!GO:0000323;lytic vacuole;2.42971797277631e-06!GO:0005764;lysosome;2.42971797277631e-06!GO:0008033;tRNA processing;2.59190779794553e-06!GO:0005762;mitochondrial large ribosomal subunit;2.69273528237845e-06!GO:0000315;organellar large ribosomal subunit;2.69273528237845e-06!GO:0004518;nuclease activity;2.71201380517185e-06!GO:0006302;double-strand break repair;2.77843714501549e-06!GO:0016853;isomerase activity;3.06674558930332e-06!GO:0005768;endosome;3.38740281636147e-06!GO:0006888;ER to Golgi vesicle-mediated transport;3.48798339265304e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.00463888848757e-06!GO:0051187;cofactor catabolic process;4.10712243388357e-06!GO:0006613;cotranslational protein targeting to membrane;6.87207932578177e-06!GO:0003682;chromatin binding;7.52808284422814e-06!GO:0003678;DNA helicase activity;7.61438288719169e-06!GO:0004527;exonuclease activity;8.38894327006347e-06!GO:0016310;phosphorylation;8.69251847779631e-06!GO:0006091;generation of precursor metabolites and energy;8.82353635387925e-06!GO:0030120;vesicle coat;1.06069973435064e-05!GO:0030662;coated vesicle membrane;1.06069973435064e-05!GO:0006950;response to stress;1.2512876051089e-05!GO:0000776;kinetochore;1.35542369587052e-05!GO:0000151;ubiquitin ligase complex;1.47482620135356e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.57788423811847e-05!GO:0006350;transcription;1.82254392996789e-05!GO:0000314;organellar small ribosomal subunit;1.82514842155699e-05!GO:0005763;mitochondrial small ribosomal subunit;1.82514842155699e-05!GO:0016563;transcription activator activity;1.92349727290318e-05!GO:0043021;ribonucleoprotein binding;2.06742334541263e-05!GO:0003684;damaged DNA binding;2.11682750957364e-05!GO:0008186;RNA-dependent ATPase activity;2.11682750957364e-05!GO:0003729;mRNA binding;2.26066782516921e-05!GO:0019752;carboxylic acid metabolic process;2.29310351271392e-05!GO:0006082;organic acid metabolic process;2.36158659547624e-05!GO:0007088;regulation of mitosis;2.46914578157817e-05!GO:0007059;chromosome segregation;2.59494419173199e-05!GO:0051427;hormone receptor binding;2.90633342928782e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.10923936696531e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.28191421583965e-05!GO:0015399;primary active transmembrane transporter activity;3.28191421583965e-05!GO:0030880;RNA polymerase complex;3.4624596197831e-05!GO:0045786;negative regulation of progression through cell cycle;3.6286184364221e-05!GO:0006352;transcription initiation;3.71289595711138e-05!GO:0006520;amino acid metabolic process;3.77526031804648e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;4.07568868511225e-05!GO:0009165;nucleotide biosynthetic process;4.24101973257089e-05!GO:0032508;DNA duplex unwinding;4.34147555116037e-05!GO:0032392;DNA geometric change;4.34147555116037e-05!GO:0006405;RNA export from nucleus;4.34147555116037e-05!GO:0005788;endoplasmic reticulum lumen;4.62817664423232e-05!GO:0010468;regulation of gene expression;5.17973206905282e-05!GO:0005770;late endosome;5.25670935154959e-05!GO:0043069;negative regulation of programmed cell death;5.72834973015333e-05!GO:0035257;nuclear hormone receptor binding;6.41733819799766e-05!GO:0006402;mRNA catabolic process;6.51778708648044e-05!GO:0004004;ATP-dependent RNA helicase activity;6.8371802388043e-05!GO:0050789;regulation of biological process;6.96939389427128e-05!GO:0043066;negative regulation of apoptosis;7.15130686396422e-05!GO:0000786;nucleosome;7.61169682813525e-05!GO:0006268;DNA unwinding during replication;8.20300871438331e-05!GO:0006612;protein targeting to membrane;8.20300871438331e-05!GO:0006916;anti-apoptosis;8.35438098557404e-05!GO:0055029;nuclear DNA-directed RNA polymerase complex;8.5025382238622e-05!GO:0000428;DNA-directed RNA polymerase complex;8.5025382238622e-05!GO:0045454;cell redox homeostasis;9.16438759332725e-05!GO:0006626;protein targeting to mitochondrion;9.45397212349915e-05!GO:0006414;translational elongation;9.68930610476255e-05!GO:0043681;protein import into mitochondrion;9.91595908304302e-05!GO:0006383;transcription from RNA polymerase III promoter;0.000103781764411221!GO:0031968;organelle outer membrane;0.000115854487425925!GO:0065009;regulation of a molecular function;0.000130890944551254!GO:0051052;regulation of DNA metabolic process;0.000134271551925279!GO:0006839;mitochondrial transport;0.000136842753452375!GO:0019867;outer membrane;0.00015019457152876!GO:0005885;Arp2/3 protein complex;0.000175559951634245!GO:0006417;regulation of translation;0.000184797934740515!GO:0046483;heterocycle metabolic process;0.000185782643924719!GO:0007093;mitotic cell cycle checkpoint;0.000185900404231254!GO:0006818;hydrogen transport;0.000188950716422127!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000198367230194459!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000200149147041047!GO:0015992;proton transport;0.000203012937365346!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000224595867749208!GO:0000049;tRNA binding;0.000251198471281445!GO:0019899;enzyme binding;0.000254582676321549!GO:0005798;Golgi-associated vesicle;0.000264055843452403!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000265516375868922!GO:0043492;ATPase activity, coupled to movement of substances;0.000266658798663455!GO:0016251;general RNA polymerase II transcription factor activity;0.000267551481729314!GO:0007006;mitochondrial membrane organization and biogenesis;0.000290794275774509!GO:0031072;heat shock protein binding;0.000296215247244453!GO:0005684;U2-dependent spliceosome;0.000303902746231956!GO:0008654;phospholipid biosynthetic process;0.000310857729564711!GO:0003677;DNA binding;0.000312709810063609!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000329563531248598!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000337339200225936!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000351635446012708!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000355193230479744!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000367536405691781!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000373653985280709!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000405475163274215!GO:0048523;negative regulation of cellular process;0.000422592633164254!GO:0005637;nuclear inner membrane;0.000427186271683779!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000501275174735029!GO:0015980;energy derivation by oxidation of organic compounds;0.000504920287415907!GO:0032200;telomere organization and biogenesis;0.000539399297364385!GO:0000723;telomere maintenance;0.000539399297364385!GO:0005741;mitochondrial outer membrane;0.000605419526137348!GO:0006284;base-excision repair;0.000636081485999982!GO:0031324;negative regulation of cellular metabolic process;0.000650390496511463!GO:0000059;protein import into nucleus, docking;0.000659182861532823!GO:0050662;coenzyme binding;0.000702096982711848!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000720131077595861!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000720131077595861!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000720131077595861!GO:0008632;apoptotic program;0.000760480426145915!GO:0009451;RNA modification;0.000789442922430159!GO:0006367;transcription initiation from RNA polymerase II promoter;0.000799150376944272!GO:0005769;early endosome;0.000859008586009131!GO:0006289;nucleotide-excision repair;0.000937157641495195!GO:0007052;mitotic spindle organization and biogenesis;0.000941589204053303!GO:0030118;clathrin coat;0.00103056706355648!GO:0031326;regulation of cellular biosynthetic process;0.00104031435800347!GO:0047485;protein N-terminus binding;0.00106295008015881!GO:0000228;nuclear chromosome;0.00106490366523175!GO:0006338;chromatin remodeling;0.00106909833352078!GO:0000922;spindle pole;0.00106909833352078!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00117391910638231!GO:0009112;nucleobase metabolic process;0.00126622815118093!GO:0051539;4 iron, 4 sulfur cluster binding;0.00127882077222677!GO:0048500;signal recognition particle;0.00130933184220233!GO:0000287;magnesium ion binding;0.0013370388540759!GO:0000082;G1/S transition of mitotic cell cycle;0.0013370388540759!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00135508865561769!GO:0005048;signal sequence binding;0.00135779301453437!GO:0051920;peroxiredoxin activity;0.00136405702977919!GO:0006270;DNA replication initiation;0.00143071414377249!GO:0004003;ATP-dependent DNA helicase activity;0.00147476188668868!GO:0016564;transcription repressor activity;0.00150821319762473!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00153160191816498!GO:0003711;transcription elongation regulator activity;0.00157089810902434!GO:0008312;7S RNA binding;0.00159362299915138!GO:0009124;nucleoside monophosphate biosynthetic process;0.00159816843113559!GO:0009123;nucleoside monophosphate metabolic process;0.00159816843113559!GO:0000096;sulfur amino acid metabolic process;0.00160468451228199!GO:0043596;nuclear replication fork;0.00174432547132333!GO:0005876;spindle microtubule;0.00176000005709893!GO:0044440;endosomal part;0.00176000005709893!GO:0010008;endosome membrane;0.00176000005709893!GO:0044431;Golgi apparatus part;0.00182083770702237!GO:0051540;metal cluster binding;0.00182751451313037!GO:0051536;iron-sulfur cluster binding;0.00182751451313037!GO:0032774;RNA biosynthetic process;0.00188504289606986!GO:0042802;identical protein binding;0.00189440796909158!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00207755652172882!GO:0006519;amino acid and derivative metabolic process;0.00208441007714199!GO:0005774;vacuolar membrane;0.00208441007714199!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00209549875252597!GO:0008276;protein methyltransferase activity;0.00217365935779348!GO:0031124;mRNA 3'-end processing;0.00222711779349483!GO:0006595;polyamine metabolic process;0.00227874065654034!GO:0016859;cis-trans isomerase activity;0.00229709782250064!GO:0004540;ribonuclease activity;0.0023256717016528!GO:0003887;DNA-directed DNA polymerase activity;0.00234854974888914!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00239473600151479!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00239473600151479!GO:0006351;transcription, DNA-dependent;0.00242565538422608!GO:0030384;phosphoinositide metabolic process;0.00263575209103603!GO:0000781;chromosome, telomeric region;0.00269515726060746!GO:0007034;vacuolar transport;0.00279457922909711!GO:0015631;tubulin binding;0.00285328198403959!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00288455651441115!GO:0006144;purine base metabolic process;0.00294718836149821!GO:0042393;histone binding;0.00298181252575581!GO:0046474;glycerophospholipid biosynthetic process;0.00299764749007143!GO:0031570;DNA integrity checkpoint;0.00309361985825599!GO:0051252;regulation of RNA metabolic process;0.00312708258496551!GO:0000178;exosome (RNase complex);0.00313652241739438!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00314311304433472!GO:0045047;protein targeting to ER;0.00314311304433472!GO:0005758;mitochondrial intermembrane space;0.00318342207263662!GO:0044262;cellular carbohydrate metabolic process;0.00318342207263662!GO:0008408;3'-5' exonuclease activity;0.00318342207263662!GO:0032259;methylation;0.00342503869525021!GO:0042770;DNA damage response, signal transduction;0.0034652652047454!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00346577560982564!GO:0005525;GTP binding;0.00346577560982564!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00368048518793473!GO:0046489;phosphoinositide biosynthetic process;0.00373446351861108!GO:0051087;chaperone binding;0.00387547404335212!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00389628616159465!GO:0006406;mRNA export from nucleus;0.00390481549021245!GO:0043414;biopolymer methylation;0.00392104460331484!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00397061174488358!GO:0043284;biopolymer biosynthetic process;0.00398523407476288!GO:0048519;negative regulation of biological process;0.00405412658007249!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00409701799275829!GO:0051287;NAD binding;0.00409701799275829!GO:0000792;heterochromatin;0.00409701799275829!GO:0005669;transcription factor TFIID complex;0.00415638577958106!GO:0016407;acetyltransferase activity;0.00416106459318379!GO:0009161;ribonucleoside monophosphate metabolic process;0.00420987059882173!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.00420987059882173!GO:0030658;transport vesicle membrane;0.00425207862717976!GO:0000339;RNA cap binding;0.00448205382960578!GO:0008139;nuclear localization sequence binding;0.00457291114402699!GO:0030119;AP-type membrane coat adaptor complex;0.00459757824473472!GO:0044437;vacuolar part;0.00460145598595451!GO:0016272;prefoldin complex;0.00467019152781386!GO:0009303;rRNA transcription;0.00492155910318619!GO:0000819;sister chromatid segregation;0.00499017706257123!GO:0006611;protein export from nucleus;0.00523557460483225!GO:0031123;RNA 3'-end processing;0.00528596082783211!GO:0045449;regulation of transcription;0.00536772225497761!GO:0009889;regulation of biosynthetic process;0.00539133764686985!GO:0005765;lysosomal membrane;0.00550148807674919!GO:0050790;regulation of catalytic activity;0.00569271161495331!GO:0000725;recombinational repair;0.00569271161495331!GO:0000724;double-strand break repair via homologous recombination;0.00569271161495331!GO:0007050;cell cycle arrest;0.00569271161495331!GO:0000070;mitotic sister chromatid segregation;0.00594093768673416!GO:0030867;rough endoplasmic reticulum membrane;0.0059518340067944!GO:0043601;nuclear replisome;0.00604514380138169!GO:0030894;replisome;0.00604514380138169!GO:0019783;small conjugating protein-specific protease activity;0.00607051257072217!GO:0000209;protein polyubiquitination;0.00607051257072217!GO:0009892;negative regulation of metabolic process;0.00609787948649332!GO:0004532;exoribonuclease activity;0.00632786459966955!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00632786459966955!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00642366113155012!GO:0003924;GTPase activity;0.00645655399559825!GO:0030663;COPI coated vesicle membrane;0.00651823784485386!GO:0030126;COPI vesicle coat;0.00651823784485386!GO:0030131;clathrin adaptor complex;0.00654561188164426!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00657759754428391!GO:0031970;organelle envelope lumen;0.00668572098964302!GO:0000118;histone deacetylase complex;0.00668681119018045!GO:0008234;cysteine-type peptidase activity;0.00680670328441625!GO:0043065;positive regulation of apoptosis;0.00688470651929155!GO:0004843;ubiquitin-specific protease activity;0.00706007509560424!GO:0003702;RNA polymerase II transcription factor activity;0.00709213236489442!GO:0009116;nucleoside metabolic process;0.00723095667628812!GO:0046112;nucleobase biosynthetic process;0.00732001884780568!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00739205426746779!GO:0006118;electron transport;0.00745110050318859!GO:0022890;inorganic cation transmembrane transporter activity;0.00752533986794761!GO:0046983;protein dimerization activity;0.00757470012725259!GO:0008652;amino acid biosynthetic process;0.00803968762690565!GO:0046966;thyroid hormone receptor binding;0.00805935085528703!GO:0044454;nuclear chromosome part;0.00806713847950342!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00806713847950342!GO:0015002;heme-copper terminal oxidase activity;0.00806713847950342!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00806713847950342!GO:0004129;cytochrome-c oxidase activity;0.00806713847950342!GO:0048037;cofactor binding;0.00815606749847937!GO:0006378;mRNA polyadenylation;0.00830047597786725!GO:0006376;mRNA splice site selection;0.00843528633291458!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00843528633291458!GO:0008180;signalosome;0.00856607493591907!GO:0043488;regulation of mRNA stability;0.00859014629334566!GO:0043487;regulation of RNA stability;0.00859014629334566!GO:0005832;chaperonin-containing T-complex;0.00861814711576712!GO:0003714;transcription corepressor activity;0.0087134823891018!GO:0043068;positive regulation of programmed cell death;0.00874256761598182!GO:0016790;thiolester hydrolase activity;0.00880689753142121!GO:0016197;endosome transport;0.00904959283581734!GO:0016481;negative regulation of transcription;0.00904959283581734!GO:0004674;protein serine/threonine kinase activity;0.00905347898461652!GO:0006650;glycerophospholipid metabolic process;0.00938059802787876!GO:0006400;tRNA modification;0.00942632699149234!GO:0000152;nuclear ubiquitin ligase complex;0.00944322275709725!GO:0000077;DNA damage checkpoint;0.00947163362064274!GO:0030660;Golgi-associated vesicle membrane;0.00962741459519311!GO:0043022;ribosome binding;0.0096289804625168!GO:0046822;regulation of nucleocytoplasmic transport;0.00982256669099953!GO:0016584;nucleosome positioning;0.010163361772908!GO:0031647;regulation of protein stability;0.0103889200505765!GO:0031902;late endosome membrane;0.0104703291727085!GO:0040029;regulation of gene expression, epigenetic;0.0104703291727085!GO:0030137;COPI-coated vesicle;0.0105519755029805!GO:0048487;beta-tubulin binding;0.0105576590326732!GO:0000726;non-recombinational repair;0.0105878470551543!GO:0051053;negative regulation of DNA metabolic process;0.0106119567369624!GO:0032039;integrator complex;0.0108028788474771!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0111355514615944!GO:0030521;androgen receptor signaling pathway;0.0111830686574443!GO:0004221;ubiquitin thiolesterase activity;0.0112046012182059!GO:0005663;DNA replication factor C complex;0.0113601401530935!GO:0006275;regulation of DNA replication;0.0117396323680419!GO:0000139;Golgi membrane;0.0121962946047476!GO:0003746;translation elongation factor activity;0.0126285884450434!GO:0019206;nucleoside kinase activity;0.0127508466045381!GO:0007004;telomere maintenance via telomerase;0.0129622562992073!GO:0004177;aminopeptidase activity;0.012998654809589!GO:0003725;double-stranded RNA binding;0.0132668964269191!GO:0031982;vesicle;0.0133229047404117!GO:0006506;GPI anchor biosynthetic process;0.0133229047404117!GO:0035258;steroid hormone receptor binding;0.0133497840586455!GO:0003756;protein disulfide isomerase activity;0.0134461438443408!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0134461438443408!GO:0008017;microtubule binding;0.0135222057832884!GO:0004576;oligosaccharyl transferase activity;0.0135593189912511!GO:0000123;histone acetyltransferase complex;0.0136955300417073!GO:0016408;C-acyltransferase activity;0.0136955300417073!GO:0009081;branched chain family amino acid metabolic process;0.0137249172022136!GO:0006007;glucose catabolic process;0.0137544549981196!GO:0032940;secretion by cell;0.0143429087970798!GO:0006779;porphyrin biosynthetic process;0.0144732093328382!GO:0033014;tetrapyrrole biosynthetic process;0.0144732093328382!GO:0000910;cytokinesis;0.0145097218706236!GO:0007040;lysosome organization and biogenesis;0.0147053607428534!GO:0007041;lysosomal transport;0.0147372954392475!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.014844098409343!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0149204884768387!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0149204884768387!GO:0009126;purine nucleoside monophosphate metabolic process;0.0149204884768387!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0149204884768387!GO:0019843;rRNA binding;0.014951520351697!GO:0043189;H4/H2A histone acetyltransferase complex;0.0151123726447644!GO:0006730;one-carbon compound metabolic process;0.0151123726447644!GO:0006917;induction of apoptosis;0.0154717273202248!GO:0008047;enzyme activator activity;0.0154722500021753!GO:0000097;sulfur amino acid biosynthetic process;0.0157299903871121!GO:0030134;ER to Golgi transport vesicle;0.0157299903871121!GO:0005996;monosaccharide metabolic process;0.0161259401757973!GO:0030176;integral to endoplasmic reticulum membrane;0.0161445028285542!GO:0006807;nitrogen compound metabolic process;0.0162605840457227!GO:0008610;lipid biosynthetic process;0.0162720580389507!GO:0007017;microtubule-based process;0.0162720580389507!GO:0006891;intra-Golgi vesicle-mediated transport;0.0163265472837766!GO:0006740;NADPH regeneration;0.0163544479631053!GO:0006098;pentose-phosphate shunt;0.0163544479631053!GO:0006220;pyrimidine nucleotide metabolic process;0.0163858031483545!GO:0046467;membrane lipid biosynthetic process;0.0167832860837321!GO:0051789;response to protein stimulus;0.0169671232380371!GO:0006986;response to unfolded protein;0.0169671232380371!GO:0007021;tubulin folding;0.0170909447757994!GO:0051098;regulation of binding;0.017407024233951!GO:0004523;ribonuclease H activity;0.0174824060403013!GO:0035267;NuA4 histone acetyltransferase complex;0.0174919398681822!GO:0008022;protein C-terminus binding;0.0175714335703125!GO:0006505;GPI anchor metabolic process;0.0177774122284795!GO:0065007;biological regulation;0.0177944266466348!GO:0000793;condensed chromosome;0.0178855481891157!GO:0045045;secretory pathway;0.0183275200552751!GO:0046365;monosaccharide catabolic process;0.0187828060990123!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0188486131826929!GO:0009308;amine metabolic process;0.0189590061170628!GO:0030041;actin filament polymerization;0.0192098791109824!GO:0006278;RNA-dependent DNA replication;0.0193344079697876!GO:0012502;induction of programmed cell death;0.0193632065758756!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0193694352717599!GO:0010257;NADH dehydrogenase complex assembly;0.0193694352717599!GO:0033108;mitochondrial respiratory chain complex assembly;0.0193694352717599!GO:0019318;hexose metabolic process;0.0196569211949442!GO:0007243;protein kinase cascade;0.0198323906856845!GO:0005652;nuclear lamina;0.0198323906856845!GO:0030127;COPII vesicle coat;0.0207528432105461!GO:0012507;ER to Golgi transport vesicle membrane;0.0207528432105461!GO:0004448;isocitrate dehydrogenase activity;0.0208180134011187!GO:0031988;membrane-bound vesicle;0.0209916790997098!GO:0042054;histone methyltransferase activity;0.021703395108386!GO:0030518;steroid hormone receptor signaling pathway;0.0225367731757894!GO:0032561;guanyl ribonucleotide binding;0.022793527682052!GO:0019001;guanyl nucleotide binding;0.022793527682052!GO:0046426;negative regulation of JAK-STAT cascade;0.0229125113699255!GO:0008250;oligosaccharyl transferase complex;0.0229253078282019!GO:0045947;negative regulation of translational initiation;0.0245941278122447!GO:0008538;proteasome activator activity;0.0252289152965537!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0255931121461765!GO:0006497;protein amino acid lipidation;0.0256542718701883!GO:0016279;protein-lysine N-methyltransferase activity;0.0256542718701883!GO:0018024;histone-lysine N-methyltransferase activity;0.0256542718701883!GO:0016278;lysine N-methyltransferase activity;0.0256542718701883!GO:0031577;spindle checkpoint;0.0258403847594533!GO:0044438;microbody part;0.0258403847594533!GO:0044439;peroxisomal part;0.0258403847594533!GO:0044450;microtubule organizing center part;0.0260309881955016!GO:0006596;polyamine biosynthetic process;0.0263118038664243!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0268021246744523!GO:0006635;fatty acid beta-oxidation;0.0269948055430146!GO:0005680;anaphase-promoting complex;0.0270777589917629!GO:0015036;disulfide oxidoreductase activity;0.0271090801150513!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0273049810311968!GO:0007033;vacuole organization and biogenesis;0.0276369811064479!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0277973524300883!GO:0000175;3'-5'-exoribonuclease activity;0.0280543533077624!GO:0046164;alcohol catabolic process;0.0280543533077624!GO:0006733;oxidoreduction coenzyme metabolic process;0.0280543533077624!GO:0005732;small nucleolar ribonucleoprotein complex;0.0281542922219679!GO:0006778;porphyrin metabolic process;0.0281542922219679!GO:0033013;tetrapyrrole metabolic process;0.0281542922219679!GO:0031410;cytoplasmic vesicle;0.0282566434833703!GO:0030133;transport vesicle;0.0283079282515968!GO:0016180;snRNA processing;0.0284921475765983!GO:0016073;snRNA metabolic process;0.0284921475765983!GO:0019320;hexose catabolic process;0.0299256630881641!GO:0019238;cyclohydrolase activity;0.0299256630881641!GO:0032984;macromolecular complex disassembly;0.0301009751962221!GO:0008170;N-methyltransferase activity;0.030336672672598!GO:0008097;5S rRNA binding;0.0305737296490789!GO:0005777;peroxisome;0.0306387544794618!GO:0042579;microbody;0.0306387544794618!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0309282725424203!GO:0033116;ER-Golgi intermediate compartment membrane;0.0309285262571476!GO:0031252;leading edge;0.0310424542471767!GO:0006555;methionine metabolic process;0.0311341511384722!GO:0016569;covalent chromatin modification;0.0317165843843892!GO:0048471;perinuclear region of cytoplasm;0.0317937492498172!GO:0005874;microtubule;0.0322028657000039!GO:0001522;pseudouridine synthesis;0.0322159932990895!GO:0031371;ubiquitin conjugating enzyme complex;0.0323173084108301!GO:0005689;U12-dependent spliceosome;0.0323173084108301!GO:0022415;viral reproductive process;0.032407179500444!GO:0043631;RNA polyadenylation;0.0328803892721248!GO:0005784;translocon complex;0.0329713078085525!GO:0009066;aspartate family amino acid metabolic process;0.0329713078085525!GO:0003709;RNA polymerase III transcription factor activity;0.0330721859079896!GO:0016023;cytoplasmic membrane-bound vesicle;0.0333754235029132!GO:0005869;dynactin complex;0.0333941738174591!GO:0009083;branched chain family amino acid catabolic process;0.0337948853417703!GO:0045815;positive regulation of gene expression, epigenetic;0.0339837345061556!GO:0008213;protein amino acid alkylation;0.0340502524944193!GO:0006479;protein amino acid methylation;0.0340502524944193!GO:0018193;peptidyl-amino acid modification;0.0342683922672513!GO:0030132;clathrin coat of coated pit;0.0346346088410851!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0346732520796304!GO:0031903;microbody membrane;0.0349431231048899!GO:0005778;peroxisomal membrane;0.0349431231048899!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0350563915669886!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0350563915669886!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0350563915669886!GO:0046128;purine ribonucleoside metabolic process;0.0350563915669886!GO:0042278;purine nucleoside metabolic process;0.0350563915669886!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.035067245317405!GO:0045039;protein import into mitochondrial inner membrane;0.035067245317405!GO:0008629;induction of apoptosis by intracellular signals;0.0351914748833597!GO:0005975;carbohydrate metabolic process;0.0354344657830199!GO:0004659;prenyltransferase activity;0.0359635106848667!GO:0004519;endonuclease activity;0.0361926587544704!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0361926587544704!GO:0006783;heme biosynthetic process;0.0370671828985984!GO:0006607;NLS-bearing substrate import into nucleus;0.0373130916308893!GO:0050178;phenylpyruvate tautomerase activity;0.0373167306824125!GO:0018196;peptidyl-asparagine modification;0.0374564442336327!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0374564442336327!GO:0033170;DNA-protein loading ATPase activity;0.0377887762582433!GO:0003689;DNA clamp loader activity;0.0377887762582433!GO:0009967;positive regulation of signal transduction;0.0380713579274423!GO:0030508;thiol-disulfide exchange intermediate activity;0.0385292683927036!GO:0009113;purine base biosynthetic process;0.0385292683927036!GO:0000303;response to superoxide;0.0388331769355216!GO:0016126;sterol biosynthetic process;0.0388389466145753!GO:0004239;methionyl aminopeptidase activity;0.038857373656769!GO:0009067;aspartate family amino acid biosynthetic process;0.0390649078404774!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0392705851101736!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0392705851101736!GO:0005791;rough endoplasmic reticulum;0.0402155575004919!GO:0042026;protein refolding;0.0403115588067378!GO:0000305;response to oxygen radical;0.0413225035899278!GO:0005881;cytoplasmic microtubule;0.0417877809977524!GO:0016860;intramolecular oxidoreductase activity;0.0422073705256111!GO:0004300;enoyl-CoA hydratase activity;0.0432363685186312!GO:0030433;ER-associated protein catabolic process;0.0432363685186312!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0432363685186312!GO:0003985;acetyl-CoA C-acetyltransferase activity;0.0437205447032754!GO:0016453;C-acetyltransferase activity;0.0437205447032754!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0437807789383212!GO:0008536;Ran GTPase binding;0.0438751188215346!GO:0033367;protein localization in mast cell secretory granule;0.0438751188215346!GO:0033365;protein localization in organelle;0.0438751188215346!GO:0033371;T cell secretory granule organization and biogenesis;0.0438751188215346!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0438751188215346!GO:0033375;protease localization in T cell secretory granule;0.0438751188215346!GO:0042629;mast cell granule;0.0438751188215346!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0438751188215346!GO:0033364;mast cell secretory granule organization and biogenesis;0.0438751188215346!GO:0033380;granzyme B localization in T cell secretory granule;0.0438751188215346!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0438751188215346!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0438751188215346!GO:0033368;protease localization in mast cell secretory granule;0.0438751188215346!GO:0033366;protein localization in secretory granule;0.0438751188215346!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0438751188215346!GO:0033374;protein localization in T cell secretory granule;0.0438751188215346!GO:0051219;phosphoprotein binding;0.0438817462458447!GO:0008156;negative regulation of DNA replication;0.04397317361164!GO:0022406;membrane docking;0.0446095851742233!GO:0048278;vesicle docking;0.0446095851742233!GO:0017134;fibroblast growth factor binding;0.0446095851742233!GO:0000018;regulation of DNA recombination;0.0451548436310686!GO:0006672;ceramide metabolic process;0.0457904121787387!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0463561825507236!GO:0006301;postreplication repair;0.0465069385719006!GO:0000790;nuclear chromatin;0.0466928275217129!GO:0043241;protein complex disassembly;0.0471546100604656!GO:0009262;deoxyribonucleotide metabolic process;0.04729380840004!GO:0000119;mediator complex;0.04729380840004!GO:0008537;proteasome activator complex;0.0473662768900363!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0476873772684251!GO:0032040;small subunit processome;0.0481634968040117!GO:0008143;poly(A) binding;0.0482278924117739!GO:0030911;TPR domain binding;0.0495060995093073!GO:0042769;DNA damage response, detection of DNA damage;0.0498127109086758
|sample_id=10833
|sample_id=10833
|sample_note=
|sample_note=
Line 76: Line 99:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=MYB:2.19635147783;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.76544221943;E2F1..5:1.69850936243;AIRE:1.4999849136;CDX1,2,4:1.45107433778;ZBTB16:1.38629769831;YY1:1.29941807272;FOXD3:1.21735474286;NKX2-2,8:1.15453853405;PITX1..3:1.13428916454;POU1F1:1.03963159959;TOPORS:1.03905701026;TEF:1.03337189581;DMAP1_NCOR{1,2}_SMARC:1.02515360087;IKZF2:0.991059905274;SPIB:0.973133325155;NANOG:0.953971696655;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.899116161908;BREu{core}:0.894491858663;ALX1:0.846225175161;NKX3-1:0.807291000628;HOX{A6,A7,B6,B7}:0.804579433518;PAX4:0.783319137926;SPI1:0.739837106185;HAND1,2:0.706986800529;ELF1,2,4:0.67145197944;FOXP3:0.643315198833;NFY{A,B,C}:0.63416409796;FOXA2:0.601881886997;ZNF384:0.590464262379;OCT4_SOX2{dimer}:0.571283537383;POU2F1..3:0.567139831556;NRF1:0.566037823132;RUNX1..3:0.5602174473;ELK1,4_GABP{A,B1}:0.53250947802;GATA4:0.471979115898;EVI1:0.469184319008;ZNF143:0.450647061547;CUX2:0.432487263135;KLF4:0.397925268067;NR5A1,2:0.382128468105;FOXP1:0.332749853652;GFI1:0.331860151974;GATA6:0.318916105819;NKX6-1,2:0.305602821118;HOX{A4,D4}:0.293213412307;ETS1,2:0.274045827277;PAX8:0.214077032497;POU3F1..4:0.212260388109;ARID5B:0.178714990359;MYOD1:0.177582027954;STAT1,3:0.174938939892;STAT5{A,B}:0.174904873564;NKX2-1,4:0.173019540549;FOXM1:0.164457826699;HES1:0.163321818879;NANOG{mouse}:0.151282266977;POU5F1:0.150339383251;UFEwm:0.145261608197;HSF1,2:0.119951677533;T:0.118213986191;AHR_ARNT_ARNT2:0.109557757748;PRDM1:0.105841944512;FOXQ1:0.0973115246581;HNF4A_NR2F1,2:0.0915021953319;DBP:0.0796261602358;TLX2:0.0721786287336;NFIL3:0.0686587011738;CEBPA,B_DDIT3:-0.00673921556049;NR6A1:-0.0521654809186;bHLH_family:-0.0558408919693;AR:-0.0571611633273;CRX:-0.0661517794168;RXRA_VDR{dimer}:-0.0671132120767;HOXA9_MEIS1:-0.0943569956986;NFE2L1:-0.103552826472;ZNF238:-0.109846588168;ATF5_CREB3:-0.123570811911;PRRX1,2:-0.140854674627;HBP1_HMGB_SSRP1_UBTF:-0.143491065305;RFX2..5_RFXANK_RFXAP:-0.146688978867;SOX{8,9,10}:-0.154270239289;NKX2-3_NKX2-5:-0.167648359068;NKX3-2:-0.174748343405;EN1,2:-0.188108769315;PAX3,7:-0.206816326755;GCM1,2:-0.218210877474;NFKB1_REL_RELA:-0.219144718575;IRF1,2:-0.227406145278;PAX5:-0.240349399147;HNF1A:-0.257754025588;ZEB1:-0.290979598709;HOX{A5,B5}:-0.29239513617;PBX1:-0.304840023652;CREB1:-0.31563564219;ONECUT1,2:-0.330605065825;TFDP1:-0.347527346715;IRF7:-0.377078101108;MTF1:-0.380972237513;ESRRA:-0.384570076508;REST:-0.415747428937;NFE2:-0.419988453021;SOX5:-0.42958709091;MYBL2:-0.436103953119;HLF:-0.437267297181;PAX6:-0.439501022008;TGIF1:-0.444326909595;SOX17:-0.455239626119;PAX2:-0.463915352203;NR1H4:-0.464024681244;BPTF:-0.465016547868;RXR{A,B,G}:-0.491387104637;PDX1:-0.497461561864;SNAI1..3:-0.498205338109;VSX1,2:-0.503371199338;FOS_FOS{B,L1}_JUN{B,D}:-0.507101766685;NHLH1,2:-0.517024908623;MEF2{A,B,C,D}:-0.546444804407;ATF4:-0.555088067985;NFE2L2:-0.57493365556;FOXL1:-0.580565344013;SREBF1,2:-0.617652236506;FOX{F1,F2,J1}:-0.63499122877;FOX{I1,J2}:-0.63845817067;ADNP_IRX_SIX_ZHX:-0.646747712578;RORA:-0.650893026991;FOSL2:-0.669154561213;POU6F1:-0.682302472806;ESR1:-0.684841147796;SRF:-0.700564467819;GZF1:-0.702838179109;HMGA1,2:-0.712636999311;EP300:-0.71437037305;BACH2:-0.72352145042;FOXN1:-0.73002516308;RREB1:-0.7478777076;LEF1_TCF7_TCF7L1,2:-0.755636637844;MYFfamily:-0.797654055456;FOXO1,3,4:-0.813243614129;PPARG:-0.823698494218;GTF2A1,2:-0.848921966001;SOX2:-0.861531659338;LHX3,4:-0.873476105928;GFI1B:-0.877118469126;TP53:-0.898696041259;TBP:-0.898991049877;RFX1:-0.926021980033;MZF1:-0.933059760322;TAL1_TCF{3,4,12}:-0.938533991845;STAT2,4,6:-0.942429232846;RBPJ:-0.944691347185;ZFP161:-0.950934204636;ZNF423:-0.979013326807;LMO2:-1.01133735281;CDC5L:-1.01791499595;TFAP4:-1.02234157693;HIC1:-1.05654194019;ALX4:-1.09744198463;ZNF148:-1.11629476468;MAFB:-1.12149684512;IKZF1:-1.1338496062;XCPE1{core}:-1.1438546465;GTF2I:-1.15263287817;XBP1:-1.20124842122;HIF1A:-1.2100583907;GLI1..3:-1.23779145525;ATF2:-1.24480821579;ZIC1..3:-1.25900357297;ZBTB6:-1.26487401017;MTE{core}:-1.30673825761;NFIX:-1.34627172699;TEAD1:-1.34837004062;MED-1{core}:-1.36370512104;TFAP2{A,C}:-1.36912427356;PATZ1:-1.40069982584;TFCP2:-1.40450672183;HMX1:-1.44622444933;TBX4,5:-1.44949704334;FOX{D1,D2}:-1.47447176141;TFAP2B:-1.49823942625;EBF1:-1.53132648165;PAX1,9:-1.5340532681;NFATC1..3:-1.54277413095;SPZ1:-1.55824605469;TLX1..3_NFIC{dimer}:-1.60068520942;ATF6:-1.68079180555;EGR1..3:-1.68537846308;MAZ:-1.69888132126;NR3C1:-1.73691678105;SP1:-1.7536795976;JUN:-1.81962763036;SMAD1..7,9:-1.84147852453
|top_motifs=MYB:2.19635147783;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.76544221943;E2F1..5:1.69850936243;AIRE:1.4999849136;CDX1,2,4:1.45107433778;ZBTB16:1.38629769831;YY1:1.29941807272;FOXD3:1.21735474286;NKX2-2,8:1.15453853405;PITX1..3:1.13428916454;POU1F1:1.03963159959;TOPORS:1.03905701026;TEF:1.03337189581;DMAP1_NCOR{1,2}_SMARC:1.02515360087;IKZF2:0.991059905274;SPIB:0.973133325155;NANOG:0.953971696655;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.899116161908;BREu{core}:0.894491858663;ALX1:0.846225175161;NKX3-1:0.807291000628;HOX{A6,A7,B6,B7}:0.804579433518;PAX4:0.783319137926;SPI1:0.739837106185;HAND1,2:0.706986800529;ELF1,2,4:0.67145197944;FOXP3:0.643315198833;NFY{A,B,C}:0.63416409796;FOXA2:0.601881886997;ZNF384:0.590464262379;OCT4_SOX2{dimer}:0.571283537383;POU2F1..3:0.567139831556;NRF1:0.566037823132;RUNX1..3:0.5602174473;ELK1,4_GABP{A,B1}:0.53250947802;GATA4:0.471979115898;EVI1:0.469184319008;ZNF143:0.450647061547;CUX2:0.432487263135;KLF4:0.397925268067;NR5A1,2:0.382128468105;FOXP1:0.332749853652;GFI1:0.331860151974;GATA6:0.318916105819;NKX6-1,2:0.305602821118;HOX{A4,D4}:0.293213412307;ETS1,2:0.274045827277;PAX8:0.214077032497;POU3F1..4:0.212260388109;ARID5B:0.178714990359;MYOD1:0.177582027954;STAT1,3:0.174938939892;STAT5{A,B}:0.174904873564;NKX2-1,4:0.173019540549;FOXM1:0.164457826699;HES1:0.163321818879;NANOG{mouse}:0.151282266977;POU5F1:0.150339383251;UFEwm:0.145261608197;HSF1,2:0.119951677533;T:0.118213986191;AHR_ARNT_ARNT2:0.109557757748;PRDM1:0.105841944512;FOXQ1:0.0973115246581;HNF4A_NR2F1,2:0.0915021953319;DBP:0.0796261602358;TLX2:0.0721786287336;NFIL3:0.0686587011738;CEBPA,B_DDIT3:-0.00673921556049;NR6A1:-0.0521654809186;bHLH_family:-0.0558408919693;AR:-0.0571611633273;CRX:-0.0661517794168;RXRA_VDR{dimer}:-0.0671132120767;HOXA9_MEIS1:-0.0943569956986;NFE2L1:-0.103552826472;ZNF238:-0.109846588168;ATF5_CREB3:-0.123570811911;PRRX1,2:-0.140854674627;HBP1_HMGB_SSRP1_UBTF:-0.143491065305;RFX2..5_RFXANK_RFXAP:-0.146688978867;SOX{8,9,10}:-0.154270239289;NKX2-3_NKX2-5:-0.167648359068;NKX3-2:-0.174748343405;EN1,2:-0.188108769315;PAX3,7:-0.206816326755;GCM1,2:-0.218210877474;NFKB1_REL_RELA:-0.219144718575;IRF1,2:-0.227406145278;PAX5:-0.240349399147;HNF1A:-0.257754025588;ZEB1:-0.290979598709;HOX{A5,B5}:-0.29239513617;PBX1:-0.304840023652;CREB1:-0.31563564219;ONECUT1,2:-0.330605065825;TFDP1:-0.347527346715;IRF7:-0.377078101108;MTF1:-0.380972237513;ESRRA:-0.384570076508;REST:-0.415747428937;NFE2:-0.419988453021;SOX5:-0.42958709091;MYBL2:-0.436103953119;HLF:-0.437267297181;PAX6:-0.439501022008;TGIF1:-0.444326909595;SOX17:-0.455239626119;PAX2:-0.463915352203;NR1H4:-0.464024681244;BPTF:-0.465016547868;RXR{A,B,G}:-0.491387104637;PDX1:-0.497461561864;SNAI1..3:-0.498205338109;VSX1,2:-0.503371199338;FOS_FOS{B,L1}_JUN{B,D}:-0.507101766685;NHLH1,2:-0.517024908623;MEF2{A,B,C,D}:-0.546444804407;ATF4:-0.555088067985;NFE2L2:-0.57493365556;FOXL1:-0.580565344013;SREBF1,2:-0.617652236506;FOX{F1,F2,J1}:-0.63499122877;FOX{I1,J2}:-0.63845817067;ADNP_IRX_SIX_ZHX:-0.646747712578;RORA:-0.650893026991;FOSL2:-0.669154561213;POU6F1:-0.682302472806;ESR1:-0.684841147796;SRF:-0.700564467819;GZF1:-0.702838179109;HMGA1,2:-0.712636999311;EP300:-0.71437037305;BACH2:-0.72352145042;FOXN1:-0.73002516308;RREB1:-0.7478777076;LEF1_TCF7_TCF7L1,2:-0.755636637844;MYFfamily:-0.797654055456;FOXO1,3,4:-0.813243614129;PPARG:-0.823698494218;GTF2A1,2:-0.848921966001;SOX2:-0.861531659338;LHX3,4:-0.873476105928;GFI1B:-0.877118469126;TP53:-0.898696041259;TBP:-0.898991049877;RFX1:-0.926021980033;MZF1:-0.933059760322;TAL1_TCF{3,4,12}:-0.938533991845;STAT2,4,6:-0.942429232846;RBPJ:-0.944691347185;ZFP161:-0.950934204636;ZNF423:-0.979013326807;LMO2:-1.01133735281;CDC5L:-1.01791499595;TFAP4:-1.02234157693;HIC1:-1.05654194019;ALX4:-1.09744198463;ZNF148:-1.11629476468;MAFB:-1.12149684512;IKZF1:-1.1338496062;XCPE1{core}:-1.1438546465;GTF2I:-1.15263287817;XBP1:-1.20124842122;HIF1A:-1.2100583907;GLI1..3:-1.23779145525;ATF2:-1.24480821579;ZIC1..3:-1.25900357297;ZBTB6:-1.26487401017;MTE{core}:-1.30673825761;NFIX:-1.34627172699;TEAD1:-1.34837004062;MED-1{core}:-1.36370512104;TFAP2{A,C}:-1.36912427356;PATZ1:-1.40069982584;TFCP2:-1.40450672183;HMX1:-1.44622444933;TBX4,5:-1.44949704334;FOX{D1,D2}:-1.47447176141;TFAP2B:-1.49823942625;EBF1:-1.53132648165;PAX1,9:-1.5340532681;NFATC1..3:-1.54277413095;SPZ1:-1.55824605469;TLX1..3_NFIC{dimer}:-1.60068520942;ATF6:-1.68079180555;EGR1..3:-1.68537846308;MAZ:-1.69888132126;NR3C1:-1.73691678105;SP1:-1.7536795976;JUN:-1.81962763036;SMAD1..7,9:-1.84147852453
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10833-111D5;search_select_hide=table117:FF:10833-111D5
}}
}}

Latest revision as of 15:08, 3 June 2020

Name:acute myeloid leukemia (FAB M4eo) cell line:EoL-3
Species:Human (Homo sapiens)
Library ID:CNhs13057
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
ageunknown
cell typeeosinophil progenitor cell
cell lineEoL-3
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005848
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13057 CAGE DRX007810 DRR008682
Accession ID Hg19

Library idBAMCTSS
CNhs13057 DRZ000107 DRZ001492
Accession ID Hg38

Library idBAMCTSS
CNhs13057 DRZ011457 DRZ012842
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.485
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.521
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0.0726
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.00225
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.474
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.257
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0626
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0156
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0.938
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0229
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0583
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.64
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.45
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.00675
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0385
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0798
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.562
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.147
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.206
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.259
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13057

Jaspar motifP-value
MA0002.20.0192
MA0003.10.771
MA0004.10.0621
MA0006.10.221
MA0007.10.609
MA0009.10.349
MA0014.10.704
MA0017.10.007
MA0018.20.00765
MA0019.10.0436
MA0024.16.47046e-5
MA0025.10.377
MA0027.10.838
MA0028.10.00569
MA0029.10.832
MA0030.10.00765
MA0031.10.0792
MA0035.20.359
MA0038.10.0111
MA0039.20.226
MA0040.10.21
MA0041.10.149
MA0042.10.475
MA0043.10.0969
MA0046.10.0713
MA0047.20.236
MA0048.10.12
MA0050.10.495
MA0051.10.0905
MA0052.10.00244
MA0055.10.0764
MA0057.10.711
MA0058.10.0492
MA0059.14.93028e-4
MA0060.10.132
MA0061.10.671
MA0062.21.94813e-5
MA0065.20.0143
MA0066.10.764
MA0067.10.939
MA0068.10.0141
MA0069.10.183
MA0070.10.359
MA0071.10.0538
MA0072.10.861
MA0073.10.901
MA0074.10.752
MA0076.10.0114
MA0077.10.801
MA0078.10.608
MA0079.20.0853
MA0080.21.62963e-7
MA0081.10.00945
MA0083.10.00648
MA0084.10.331
MA0087.10.228
MA0088.10.0444
MA0090.15.8901e-5
MA0091.10.235
MA0092.10.381
MA0093.10.0761
MA0099.22.2875e-5
MA0100.18.1775e-4
MA0101.10.373
MA0102.20.815
MA0103.10.449
MA0104.22.05626e-4
MA0105.10.00666
MA0106.10.319
MA0107.10.0588
MA0108.22.18328e-10
MA0111.10.137
MA0112.20.082
MA0113.10.964
MA0114.10.0233
MA0115.10.0033
MA0116.17.93714e-6
MA0117.10.782
MA0119.10.659
MA0122.10.506
MA0124.10.43
MA0125.10.636
MA0131.10.147
MA0135.10.175
MA0136.16.60827e-9
MA0137.20.145
MA0138.20.942
MA0139.10.705
MA0140.10.368
MA0141.10.0356
MA0142.10.386
MA0143.10.338
MA0144.10.346
MA0145.10.405
MA0146.10.102
MA0147.13.78621e-5
MA0148.10.129
MA0149.10.108
MA0150.10.293
MA0152.10.432
MA0153.10.0328
MA0154.10.0281
MA0155.10.776
MA0156.13.51635e-5
MA0157.10.411
MA0159.10.327
MA0160.10.12
MA0162.10.611
MA0163.18.10214e-16
MA0164.10.54
MA0258.10.0643
MA0259.10.0662



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13057

Novel motifP-value
10.013
100.00696
1000.172
1010.125
1020.621
1030.145
1040.69
1050.52
1060.971
1070.471
1080.892
1090.0577
110.0704
1100.17
1110.048
1120.638
1130.997
1140.0549
1150.722
1160.221
1170.0187
1180.0198
1190.171
120.857
1200.408
1210.426
1220.633
1230.00424
1240.745
1250.235
1260.155
1270.099
1280.681
1290.45
130.0174
1300.812
1310.311
1320.626
1330.568
1340.77
1350.705
1360.343
1370.324
1380.566
1390.0763
140.888
1400.531
1410.646
1420.5
1430.906
1440.996
1450.979
1460.604
1470.236
1480.04
1490.614
150.144
1500.625
1510.658
1520.216
1530.925
1540.823
1550.0431
1560.674
1570.384
1580.835
1590.795
160.649
1600.134
1610.103
1620.672
1630.254
1640.133
1650.13
1660.392
1670.106
1680.305
1690.283
170.75
180.594
190.628
20.519
200.332
210.0318
220.858
230.273
240.133
250.207
260.0475
270.545
280.999
290.0102
30.0389
300.0797
310.753
320.675
330.48
340.751
350.145
360.0125
370.286
380.27
390.664
40.329
400.173
410.837
420.194
430.436
440.00776
450.297
460.0787
470.036
480.0505
490.143
50.993
500.962
510.591
520.407
530.384
540.751
550.844
560.963
570.0595
580.25
590.495
60.423
600.884
610.196
620.119
630.598
640.228
650.95
660.284
670.697
680.786
690.466
70.126
700.304
710.0158
720.842
730.569
740.642
750.0123
760.181
771
780.012
790.707
80.0535
800.191
810.1
820.529
830.55
840.665
850.534
860.504
870.432
880.657
890.947
90.87
900.0224
910.347
920.438
930.456
940.332
950.0761
960.674
970.347
980.172
990.386



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13057


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
8692 (myeloid leukemia)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0101883 (acute myeloid leukemia cell line sample)
0100740 (myeloid leukemia cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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