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{{f5samples
{{f5samples
|id=FF:10847-111F1
|DRA_sample_Accession=CAGE@SAMD00005518
|name=mesothelioma cell line:NCI-H2052
|accession_numbers=CAGE;DRX007946;DRR008818;DRZ000243;DRZ001628;DRZ011593;DRZ012978
|sample_id=10847
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|rna_tube_id=111F1
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0000066,CL:0002371,CL:0000076,CL:0000213,CL:0000215,CL:0000255,CL:0000057,CL:0000077
|rna_box=111
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:1115
|rna_position=F1
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100453,FF:0100400,FF:0100460,FF:0102424,FF:0103764
|sample_cell_lot=
|comment=
|sample_cell_catalog=CRL5915
|created_by=
|sample_company=ATCC
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr17:46622205..46622218,-!p3@HOXB2!1.53!37.99!HOXB2;;chr10:8096631..8096660,+!p1@GATA3!1.48!34.98!GATA3;;chr17:46675558..46675577,-!p2@HOXB6!1.40!24.03!HOXB6;;chr11:65667884..65667895,-!p2@FOSL1!1.39!88.52!FOSL1;;chr5:134369905..134369972,-!p1@PITX1!1.39!35.51!PITX1;;chr6:10412600..10412637,-!p1@TFAP2A!1.32!32.69!TFAP2A;;chr5:72744594..72744609,-!p1@FOXD1!1.29!82.16!FOXD1;;chr15:83953397..83953425,-!p1@BNC1!1.28!20.50!BNC1;;chr17:46682321..46682362,-!p1@HOXB6!1.28!17.85!HOXB6;;chr11:65667846..65667868,-!p1@FOSL1!1.26!444.55!FOSL1;;chr6:10415276..10415341,-!p2@TFAP2A!1.24!20.14!TFAP2A;;chr17:46622229..46622257,-!p6@HOXB2!1.21!17.85!HOXB2;;chr11:61520075..61520136,+!p1@C11orf9!1.19!30.39!C11orf9;;chr17:46655704..46655718,-!p2@HOXB4!1.17!20.67!HOXB4;;chr18:19749541..19749557,+!p1@GATA6!1.16!42.23!GATA6;;chr17:46688334..46688385,-!p1@HOXB7!1.14!18.55!HOXB7;;chr8:106330656..106330684,+!p1@ZFPM2!1.13!32.86!ZFPM2;;chr5:139492456..139492489,+!p7@PURA!1.11!12.01!PURA;;chr17:46655672..46655697,-!p3@HOXB4!1.11!11.84!HOXB4;;chr10:8096772..8096787,+!p2@GATA3!1.09!13.25!GATA3;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.08!11.13!HOXC5;;chr11:31832658..31832681,-!p1@PAX6!1.03!9.72!PAX6;;chr18:19749386..19749404,+!p2@GATA6!1.02!13.78!GATA6;;chr11:65686802..65686818,+!p6@DRAP1!1.01!16.26!DRAP1;;chr8:11561684..11561751,+!p1@GATA4!1.00!9.01!GATA4;;chr5:92918919..92918942,+!p1@NR2F1!0.99!40.29!NR2F1;;chr11:65686732..65686756,+!p2@DRAP1!0.99!37.63!DRAP1;;chr8:67525443..67525459,-!p2@MYBL1!0.98!12.90!MYBL1;;chr17:46703687..46703740,-!p1@HOXB9!0.98!8.48!HOXB9;;chr5:92918860..92918871,+!p10@NR2F1!0.95!8.83!NR2F1;;chr5:3595934..3595957,+!p2@IRX1!0.95!7.95!IRX1;;chr11:47236584..47236679,+!p1@DDB2!0.93!86.22!DDB2;;chr1:158985493..158985535,+!p4@IFI16!0.93!11.66!IFI16;;chr20:55204351..55204377,+!p1@TFAP2C!0.93!9.72!TFAP2C;;chr10:101292684..101292706,+!p1@NKX2-3!0.93!7.60!NKX2-3;;chr5:3595977..3595999,+!p1@IRX1!0.93!7.42!IRX1;;chr3:25470156..25470227,+!p2@RARB!0.93!7.42!RARB;;chr17:46675420..46675465,-!p3@HOXB6!0.92!8.48!HOXB6;;chr9:16705069..16705086,-!p3@BNC2!0.92!7.24!BNC2;;chr12:66218255..66218304,+!p3@HMGA2!0.91!19.79!HMGA2;;chr8:106330696..106330719,+!p2@ZFPM2!0.90!9.01!ZFPM2;;chr20:50721803..50721857,-!p2@ZFP64!0.89!10.95!ZFP64;;chr5:43067636..43067674,+!p6@ZNF131!0.89!9.19!ZNF131;;chr17:46622070..46622109,-!p1@HOXB2!0.88!15.20!HOXB2;;chr17:46687959..46688007,-!p2@HOXB7!0.88!9.19!HOXB7;;chr17:46690839..46690884,-!p1@HOXB8!0.88!6.54!HOXB8;;chr19:12203100..12203132,+!p1@ZNF788!0.87!13.43!ZNF788;;chr11:65687362..65687436,+!p3@DRAP1!0.86!30.04!DRAP1;;chr16:1429627..1429662,-!p2@UNKL!0.86!19.26!UNKL;;chr17:46622114..46622138,-!p4@HOXB2!0.86!9.89!HOXB2;;chr11:46299199..46299233,+!p1@CREB3L1!0.85!33.04!CREB3L1;;chr5:134369879..134369898,-!p2@PITX1!0.85!6.01!PITX1;;chr11:46299539..46299620,+!p2@CREB3L1!0.83!10.07!CREB3L1;;chr2:237077022..237077038,-!p1@GBX2!0.83!5.83!GBX2;;chr8:77593474..77593612,+!p1@ZFHX4!0.82!25.44!ZFHX4;;chr11:65668011..65668020,-!p3@FOSL1!0.82!5.65!FOSL1;;chr17:46692457..46692484,-!p2@HOXB8!0.82!5.65!HOXB8;;chr2:102091144..102091183,-!p2@RFX8!0.82!5.65!RFX8;;chr20:55205825..55205847,+!p2@TFAP2C!0.82!5.65!TFAP2C;;chr7:35293685..35293718,-!p1@TBX20!0.81!5.48!TBX20;;chr6:34204921..34204939,+!p3@HMGA1!0.80!174.75!HMGA1;;chr12:27485762..27485776,+!p3@ARNTL2!0.80!15.20!ARNTL2;;chr17:46622440..46622477,-!p5@HOXB2!0.80!6.01!HOXB2;;chr5:176738887..176738934,-!p1@MXD3!0.78!36.57!MXD3;;chr12:66218598..66218645,+!p2@HMGA2!0.78!25.27!HMGA2;;chr2:19558373..19558392,-!p1@OSR1!0.78!14.84!OSR1;;chr3:141087393..141087426,+!p3@ZBTB38!0.77!21.03!ZBTB38;;chr2:71127699..71127744,+!p1@VAX2!0.77!10.78!VAX2;;chr4:57522166..57522260,-!p2@HOPX!0.77!5.65!HOPX;;chr3:25469815..25469866,+!p3@RARB!0.77!4.95!RARB;;chr1:3569072..3569093,+!p1@TP73!0.77!4.95!TP73;;chr5:3595961..3595975,+!p3@IRX1!0.77!4.95!IRX1;;chr7:101917407..101917443,+!p3@CUX1!0.77!4.95!CUX1;;chr12:66218836..66218888,+!p1@HMGA2!0.76!48.94!HMGA2;;chr12:54447599..54447630,+!p3@HOXC4!0.75!5.83!HOXC4;;chr17:46806067..46806097,-!p1@HOXB13!0.75!4.59!HOXB13;;chr21:36421535..36421610,-!p2@RUNX1!0.74!17.67!RUNX1;;chr20:39946361..39946379,-!p2@ZHX3!0.74!14.49!ZHX3;;chr5:72744445..72744466,-!p2@FOXD1!0.73!7.60!FOXD1;;chr2:96012397..96012417,+!p3@KCNIP3!0.73!4.42!KCNIP3;;chr12:77459306..77459365,-!p1@E2F7!0.71!58.48!E2F7;;chr6:10412392..10412409,-!p4@TFAP2A!0.71!4.77!TFAP2A;;chr6:1389789..1389821,+!p1@FOXF2!0.70!5.83!FOXF2;;chr16:86544113..86544145,+!p1@FOXF1!0.70!5.12!FOXF1;;chr17:46691732..46691766,-!p4@HOXB8!0.70!4.06!HOXB8;;chr2:102091566..102091581,-!p1@RFX8!0.70!4.06!RFX8;;chr12:124873357..124873401,-!p1@NCOR2!0.69!52.12!NCOR2;;chr20:32274179..32274213,-!p1@E2F1!0.69!29.51!E2F1;;chr5:92918894..92918912,+!p2@NR2F1!0.69!14.14!NR2F1;;chr8:67525473..67525518,-!p1@MYBL1!0.69!9.72!MYBL1;;chr18:19749517..19749531,+!p3@GATA6!0.69!7.42!GATA6;;chr20:45142154..45142227,-!p1@ZNF334!0.68!8.13!ZNF334;;chr5:92919100..92919135,+!p3@NR2F1!0.68!4.77!NR2F1;;chr11:120107344..120107351,+!p1@POU2F3!0.68!4.77!POU2F3;;chr12:2986275..2986363,-!p1@FOXM1!0.67!42.23!FOXM1;;chr2:239756671..239756732,+!p1@TWIST2!0.67!13.43!TWIST2;;chr15:67418047..67418093,+!p4@SMAD3!0.67!4.77!SMAD3;;chr17:46622175..46622186,-!p12@HOXB2!0.67!3.71!HOXB2;;chr17:46675586..46675600,-!p6@HOXB6!0.67!3.71!HOXB6;;chr17:46675539..46675551,-!p7@HOXB6!0.66!3.53!HOXB6;;chr5:92918768..92918783,+!p8@NR2F1!0.66!3.53!NR2F1;;chr6:31126291..31126399,+!p1@TCF19!0.65!38.87!TCF19;;chr5:72743793..72743855,-!p4@FOXD1!0.65!4.24!FOXD1;;chr5:92918956..92918969,+!p4@NR2F1!0.64!3.71!NR2F1;;chr1:6479968..6479986,-!p1@HES2!0.64!3.36!HES2;;chr17:46806098..46806118,-!p3@HOXB13!0.64!3.36!HOXB13;;chr20:42295745..42295765,+!p1@MYBL2!0.63!62.90!MYBL2;;chr12:53614115..53614154,-!p1@RARG!0.62!20.14!RARG;;chr6:85473156..85473210,-!p2@TBX18!0.62!4.06!TBX18;;chr6:134210243..134210257,+!p1@TCF21!0.62!3.18!TCF21;;chr7:27153454..27153469,-!p2@HOXA3!0.62!3.18!HOXA3;;chr11:32457075..32457095,-!p1@WT1!0.62!3.18!WT1;;chr12:54447637..54447659,+!p4@HOXC4!0.62!3.18!HOXC4;;chr17:46688310..46688323,-!p4@HOXB7!0.62!3.18!HOXB7;;chr17:46621937..46621966,-!p2@HOXB2!0.61!9.54!HOXB2;;chr20:2673383..2673441,+!p1@EBF4!0.61!5.30!EBF4;;chr11:47236489..47236567,+!p2@DDB2!0.60!49.65!DDB2;;chr3:141087339..141087387,+!p2@ZBTB38!0.60!37.28!ZBTB38;;chr10:96122645..96122675,-!p2@NOC3L!0.60!16.79!NOC3L;;chr8:145669791..145669834,-!p1@TONSL!0.60!9.89!TONSL;;chr19:58341656..58341694,+!p5@ZNF587!0.60!3.71!ZNF587;;chr1:158985469..158985489,+!p7@IFI16!0.60!3.71!IFI16;;chr15:67418119..67418162,+!p5@SMAD3!0.60!3.36!SMAD3;;chr17:46692624..46692659,-!p3@HOXB8!0.60!3.00!HOXB8;;chr11:65688877..65688891,+!p13@DRAP1!0.60!3.00!DRAP1;;chr6:152126830..152126847,+!p4@ESR1!0.60!3.00!ESR1;;chr2:45236579..45236596,-!p2@SIX2!0.60!3.00!SIX2;;chr20:42295713..42295738,+!p2@MYBL2!0.59!20.67!MYBL2;;chr10:8095593..8095625,+!p3@GATA3!0.59!3.53!GATA3;;chr3:168864315..168864339,-!p2@MECOM!0.58!5.12!MECOM;;chr1:247171316..247171336,-!p3@ZNF695!0.58!4.59!ZNF695;;chr10:48355030..48355090,+!p1@ZNF488!0.58!3.89!ZNF488;;chr15:83953373..83953386,-!p2@BNC1!0.58!2.83!BNC1;;chr22:19748231..19748317,+!p1@TBX1!0.58!2.83!TBX1;;chr2:45236540..45236577,-!p1@SIX2!0.58!2.83!SIX2;;chr3:25470062..25470084,+!p4@RARB!0.58!2.83!RARB;;chr6:10415484..10415508,-!p3@TFAP2A!0.58!2.83!TFAP2A;;chr12:3068544..3068597,+!p1@TEAD4!0.57!19.79!TEAD4;;chr17:46655730..46655791,-!p1@HOXB4!0.57!7.77!HOXB4;;chr12:66218378..66218401,+!p6@HMGA2!0.57!4.59!HMGA2;;chr12:66218212..66218244,+!p5@HMGA2!0.57!4.24!HMGA2;;chr11:65687243..65687276,+!p8@DRAP1!0.57!3.89!DRAP1;;chr5:72744562..72744573,-!p3@FOXD1!0.57!3.53!FOXD1;;chr17:3571863..3571881,-!p1@TAX1BP3!0.56!236.06!TAX1BP3;;chr13:73633131..73633149,+!p1@KLF5!0.56!34.81!KLF5;;chr3:150126759..150126784,+!p2@TSC22D2!0.56!14.67!TSC22D2;;chr19:50431973..50431998,+!p5@ATF5!0.56!3.53!ATF5;;chr2:172949484..172949522,+!p1@DLX1!0.56!2.65!DLX1;;chr16:31076332..31076388,-!p3@ZNF668!0.56!2.65!ZNF668;;chr6:10412576..10412599,-!p5@TFAP2A!0.56!2.65!TFAP2A;;chr3:178789522..178789564,-!p2@ZMAT3!0.55!23.50!ZMAT3;;chr14:61116183..61116208,-!p1@SIX1!0.55!11.84!SIX1;;chr12:3069037..3069119,+!p2@TEAD4!0.55!10.60!TEAD4;;chr15:67357924..67357952,+!p2@SMAD3!0.54!20.32!SMAD3;;chr3:128206762..128206781,-!p2@GATA2!0.54!19.26!GATA2;;chr7:26191809..26191890,+!p1@NFE2L3!0.54!15.20!NFE2L3;;chr12:66218183..66218209,+!p4@HMGA2!0.54!5.48!HMGA2;;chr2:239756739..239756755,+!p2@TWIST2!0.54!4.77!TWIST2;;chr19:53496768..53496799,-!p1@ZNF702P!0.54!4.24!ZNF702P;;chr20:55205791..55205817,+!p3@TFAP2C!0.54!2.47!TFAP2C;;chr2:237076992..237077008,-!p2@GBX2!0.54!2.47!GBX2;;chr12:54402745..54402788,+!p1@HOXC8!0.54!2.47!HOXC8;;chr5:134369973..134369984,-!p3@PITX1!0.54!2.47!PITX1;;chr5:92918789..92918800,+!p12@NR2F1!0.54!2.47!NR2F1;;chr7:27196267..27196311,-!p1@HOXA7!0.54!2.47!HOXA7;;chr17:46622143..46622152,-!p14@HOXB2!0.54!2.47!HOXB2;;chr17:46675469..46675481,-!p4@HOXB6!0.54!2.47!HOXB6;;chr17:46692287..46692317,-!p7@HOXB8!0.54!2.47!HOXB8;;chr12:27485785..27485816,+!p1@ARNTL2!0.53!21.20!ARNTL2;;chr19:45579725..45579743,-!p1@ZNF296!0.52!12.90!ZNF296;;chr15:96874244..96874259,+!p5@NR2F2!0.52!6.71!NR2F2;;chr15:96873861..96873872,+!p9@NR2F2!0.52!5.65!NR2F2;;chr19:22817119..22817145,+!p1@ZNF492!0.52!4.42!ZNF492;;chr2:74730430..74730451,-!p1@LBX2!0.52!4.24!LBX2;;chr3:178789993..178790049,-!p5@ZMAT3!0.52!3.71!ZMAT3;;chr2:63277948..63277974,+!p1@OTX1!0.52!2.30!OTX1;;chr3:141087562..141087594,+!p12@ZBTB38!0.52!2.30!ZBTB38;;chr15:67418177..67418204,+!p9@SMAD3!0.52!2.30!SMAD3;;chr17:46692318..46692362,-!p5@HOXB8!0.52!2.30!HOXB8;;chr11:32457103..32457123,-!p3@WT1!0.52!2.30!WT1;;chr20:21494684..21494708,-!p1@NKX2-2!0.52!2.30!NKX2-2;;chr1:158979792..158979814,+!p2@IFI16!0.51!27.74!IFI16;;chr1:35656508..35656584,-!p2@SFPQ!0.51!8.83!SFPQ;;chr7:19157043..19157088,-!p2@TWIST1!0.51!6.71!TWIST1;;chr8:67525524..67525543,-!p3@MYBL1!0.51!4.24!MYBL1;;chr8:145159846..145159889,+!p6@MAF1!0.51!3.53!MAF1;;chr17:70117153..70117174,+!p1@SOX9!0.50!29.33!SOX9;;chr9:14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88940..109089037,-!p4@LEF1!0.18!0.53!LEF1;;chr4:149365827..149365870,-!p5@NR3C2!0.18!0.53!NR3C2;;chr4:149366111..149366128,-!p7@NR3C2!0.18!0.53!NR3C2;;chr5:134369683..134369708,-!p7@PITX1!0.18!0.53!PITX1;;chr5:139494422..139494433,+!p12@PURA!0.18!0.53!PURA;;chr5:142780237..142780261,-!p7@NR3C1!0.18!0.53!NR3C1;;chr5:153857778..153857794,-!p1@HAND1!0.18!0.53!HAND1;;chr5:174151612..174151633,+!p2@MSX2!0.18!0.53!MSX2;;chr5:92922801..92922812,+!p20@NR2F1!0.18!0.53!NR2F1;;chr6:10413188..10413249,-!p7@TFAP2A!0.18!0.53!TFAP2A;;chr6:1389824..1389840,+!p3@FOXF2!0.18!0.53!FOXF2;;chr6:152128782..152128803,+!p5@ESR1!0.18!0.53!ESR1;;chr6:1612300..1612324,+!p3@FOXC1!0.18!0.53!FOXC1;;chr7:101917482..101917507,+!p6@CUX1!0.18!0.53!CUX1;;chr7:27135568..27135590,-!p2@HOXA1!0.18!0.53!HOXA1;;chr8:72755987..72756002,-!p7@MSC!0.18!0.53!MSC;;chr8:93115584..93115642,-!p5@RUNX1T1!0.18!0.53!RUNX1T1;;chr15:80843472..80843480,+!p22@ARNT2!0.18!0.53!ARNT2;;chr15:80843484..80843499,+!p5@ARNT2!0.18!0.53!ARNT2;;chr15:96880438..96880445,+!p23@NR2F2!0.18!0.53!NR2F2;;chr16:67881534..67881549,-!p4@CENPT!0.18!0.53!CENPT;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!0.18!0.53!SMARCE1;;chr17:40440446..40440464,+!p5@STAT5A!0.18!0.53!STAT5A;;chr17:41623716..41623727,-!p12@ETV4!0.18!0.53!ETV4;;chr17:42287802..42287806,-!p25@UBTF!0.18!0.53!UBTF;;chr17:46659728..46659749,-!p3@HOXB3!0.18!0.53!HOXB3;;chr17:46671504..46671541,-!p2@HOXB5!0.18!0.53!HOXB5;;chr17:46691990..46692004,-!p11@HOXB8!0.18!0.53!HOXB8;;chr17:46703212..46703238,-!p2@HOXB9!0.18!0.53!HOXB9;;chr17:46703436..46703460,-!p7@HOXB9!0.18!0.53!HOXB9;;chr17:70121709..70121718,+!p2@SOX9!0.18!0.53!SOX9;;chr19:11750543..11750565,+!p2@ZNF833P!0.18!0.53!ZNF833P;;chr19:12267492..12267505,-!p2@ZNF625,p3@ZNF20!0.18!0.53!ZNF625;;chr19:13135582..13135600,+!p3@NFIX!0.18!0.53!NFIX;;chr19:3576938..3576962,+!p9@HMG20B!0.18!0.53!HMG20B;;chr10:102505493..102505546,+!p2@PAX2!0.18!0.53!PAX2;;chr11:32457185..32457193,-!p7@WT1!0.18!0.53!WT1;;chr11:45202609..45202623,+!p@chr11:45202609..45202623,+!0.18!0.53!PRDM11;;chr12:10870989..10871013,-!p11@CSDA!0.18!0.53!CSDA;;chr12:114843562..114843576,-!p8@TBX5!0.18!0.53!TBX5;;chr12:114843607..114843621,-!p7@TBX5!0.18!0.53!TBX5;;chr12:124496534..124496544,+!p6@ZNF664!0.18!0.53!ZNF664;;chr12:54447868..54447892,+!p6@HOXC6,p7@HOXC4!0.18!0.53!HOXC6;;chr12:66357214..66357233,+!p13@HMGA2!0.18!0.53!HMGA2;;chr12:96588425..96588432,+!p8@ELK3!0.18!0.53!ELK3;;chr13:100634088..100634099,+!p5@ZIC2!0.18!0.53!ZIC2;;chr19:38720356..38720369,-!p4@DPF1!0.18!0.53!DPF1;;chr19:44100672..44100683,+!p3@ZNF576!0.18!0.53!ZNF576;;chr19:45579699..45579704,-!p3@ZNF296!0.18!0.53!ZNF296;;chr19:45908286..45908291,-!p3@PPP1R13L!0.18!0.53!PPP1R13L;;chr19:50435673..50435690,+!p8@ATF5!0.18!0.53!ATF5;;chr1:197886461..197886558,+!p1@LHX9!0.18!0.53!LHX9;;chr1:200008734..200008765,+!p2@NR5A2!0.18!0.53!NR5A2;;chr1:212873084..212873137,-!p2@BATF3!0.18!0.53!BATF3;;chr1:32930647..32930684,+!p1@ZBTB8B,p4@ZBTB8A!0.18!0.53!ZBTB8B;;chr1:47779845..47779848,-!p3@STIL,p8@TAL1!0.18!0.53!TAL1;;chr20:50721788..50721799,-!p8@ZFP64!0.18!0.53!ZFP64;;chr20:61051039..61051057,-!p1@GATA5!0.18!0.53!GATA5;;chr21:38071778..38071790,+!p9@SIM2!0.18!0.53!SIM2;;chr9:124991204..124991246,-!p1@LHX6!0.18!0.53!LHX6;;chr9:130966497..130966541,-!p4@CIZ1!0.18!0.53!CIZ1;;chr9:14314476..14314487,-!p9@NFIB!0.18!0.53!NFIB;;chr9:2158487..2158498,+!p21@SMARCA2!0.18!0.53!SMARCA2;;chr9:14314946..14314983,-!p8@NFIB!0.18!0.53!NFIB;;chrX:85403445..85403479,+!p2@DACH2!0.18!0.53!DACH2;;chr9:16727978..16728010,-!p6@BNC2!0.18!0.53!BNC2;;chr19:50432453..50432468,+!p1@ATF5!0.17!74.39!ATF5;;chr2:242576460..242576600,-!p1@THAP4!0.17!19.79!THAP4;;chr3:52001448..52001478,-!p2@PCBP4!0.17!18.20!PCBP4;;chr16:4322832..4322907,-!p1@TFAP4!0.17!9.54!TFAP4;;chr12:80084768..80084821,-!p2@PAWR!0.17!8.66!PAWR;;chr14:74226747..74226779,-!p3@C14orf43!0.17!6.71!C14orf43;;chr16:29818160..29818188,+!p6@MAZ!0.17!5.48!MAZ;;chr1:45805813..45805859,+!p1@TOE1!0.17!5.30!TOE1;;chr2:95831389..95831432,-!p1@ZNF514!0.17!5.12!ZNF514;;chr17:41623692..41623715,-!p1@ETV4!0.17!4.95!ETV4;;chr19:12251144..12251181,-!p2@ZNF20!0.17!4.95!ZNF20;;chr2:242576641..242576731,-!p2@THAP4!0.17!4.42!THAP4;;chr10:105110890..105110914,-!p2@PCGF6!0.17!4.06!PCGF6;;chr12:104531854..104531893,-!p2@NFYB!0.17!4.06!NFYB;;chr19:20150301..20150321,-!p1@ZNF682!0.17!2.65!ZNF682;;chr19:36705547..36705597,-!p1@ZNF565!0.17!2.65!ZNF565;;chr20:3388207..3388236,-!p4@C20orf194!0.17!2.47!C20orf194;;chr19:53970970..53971021,+!p1@ZNF813!0.17!2.30!ZNF813;;chr12:19671171..19671175,+!p4@AEBP2!0.17!2.30!AEBP2;;chr1:158979851..158979865,+!p5@IFI16!0.17!2.12!IFI16;;chr19:44037546..44037594,+!p1@ZNF575!0.17!1.94!ZNF575;;chr1:42501569..42501614,-!p1@HIVEP3!0.17!1.94!HIVEP3;;chr1:43148625..43148710,+!p3@YBX1!0.17!1.59!YBX1;;chr19:42788636..42788660,+!p1@CIC!0.17!1.41!CIC;;chr17:7382834..7382855,-!p6@ZBTB4!0.17!1.41!ZBTB4;;chr1:247095162..247095173,-!p3@AHCTF1!0.17!1.24!AHCTF1;;chrX:76937934..76937974,-!p3@ATRX!0.17!1.24!ATRX;;chr16:54320158.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|sample_dev_stage=
|ffid_belonging_in_development=CL:0000134,CL:0000222
|sample_tissue=mesothelium
|sample_donor(cell lot)=
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Line 66: Line 40:
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|rna_lot_number=
|rna_od260/230=1.56
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|sample_age=65
|sample_category=cell lines
|sample_cell_catalog=CRL5915
|sample_cell_line=NCI-H2052
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|sample_cell_type=mesothelial cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=ATCC
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|sample_disease=mesothelioma
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|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.89650187074738e-248!GO:0043226;organelle;6.4025832554027e-197!GO:0043229;intracellular organelle;1.62736780443082e-196!GO:0043231;intracellular membrane-bound organelle;4.83157365421972e-193!GO:0043227;membrane-bound organelle;8.12774835706897e-193!GO:0005737;cytoplasm;4.72664937458438e-188!GO:0044422;organelle part;8.23417549788517e-148!GO:0044446;intracellular organelle part;1.94574021774044e-146!GO:0044444;cytoplasmic part;4.76580938629648e-130!GO:0032991;macromolecular complex;1.13634465726565e-105!GO:0030529;ribonucleoprotein complex;5.48193865097681e-88!GO:0044237;cellular metabolic process;2.34150743148883e-85!GO:0044238;primary metabolic process;3.57939890983947e-85!GO:0005515;protein binding;2.33408676254284e-82!GO:0043170;macromolecule metabolic process;1.877777079228e-81!GO:0005634;nucleus;4.35588205456454e-80!GO:0044428;nuclear part;2.09863920828042e-74!GO:0043233;organelle lumen;1.23829363982756e-72!GO:0031974;membrane-enclosed lumen;1.23829363982756e-72!GO:0003723;RNA binding;5.10002627708547e-70!GO:0005739;mitochondrion;2.13288307342921e-67!GO:0016043;cellular component organization and biogenesis;2.01267949457374e-59!GO:0043234;protein complex;1.20234089232978e-53!GO:0005840;ribosome;2.91298254894827e-52!GO:0006412;translation;3.52587360862188e-50!GO:0019538;protein metabolic process;8.15283702338182e-50!GO:0006396;RNA processing;9.26890517205544e-50!GO:0031090;organelle membrane;7.94520397165332e-48!GO:0043283;biopolymer metabolic process;2.4887442479162e-46!GO:0044429;mitochondrial part;1.6601285244891e-45!GO:0003735;structural constituent of ribosome;4.63863750617877e-45!GO:0031981;nuclear lumen;7.28672525679112e-44!GO:0044260;cellular macromolecule metabolic process;1.33790267404484e-43!GO:0044267;cellular protein metabolic process;2.46567663570367e-43!GO:0033036;macromolecule localization;1.35522973175399e-41!GO:0043228;non-membrane-bound organelle;6.89964504184354e-41!GO:0043232;intracellular non-membrane-bound organelle;6.89964504184354e-41!GO:0031967;organelle envelope;7.1295992768586e-41!GO:0015031;protein transport;9.13887065683059e-41!GO:0031975;envelope;1.09359765596083e-40!GO:0009058;biosynthetic process;1.8576921301689e-40!GO:0005829;cytosol;2.96807572256875e-40!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.35196142145123e-40!GO:0044249;cellular biosynthetic process;6.74250654773956e-40!GO:0006996;organelle organization and biogenesis;1.22826835766023e-38!GO:0016071;mRNA metabolic process;1.42453324222397e-38!GO:0033279;ribosomal subunit;2.12545080237173e-38!GO:0045184;establishment of protein localization;5.19049982634474e-38!GO:0008104;protein localization;6.60383257011569e-38!GO:0010467;gene expression;9.10361538579976e-38!GO:0046907;intracellular transport;7.2117450997967e-37!GO:0009059;macromolecule biosynthetic process;1.7799132100014e-36!GO:0065003;macromolecular complex assembly;1.83672192680224e-35!GO:0008380;RNA splicing;4.09562837893775e-34!GO:0006259;DNA metabolic process;2.26339761756852e-33!GO:0006397;mRNA processing;2.6850211860814e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.53900957074156e-33!GO:0022607;cellular component assembly;1.00605350273812e-31!GO:0007049;cell cycle;6.55468367673513e-31!GO:0005740;mitochondrial envelope;6.81856727394624e-29!GO:0006886;intracellular protein transport;1.46810142716389e-28!GO:0000166;nucleotide binding;1.96743374578672e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.28059419175279e-27!GO:0031966;mitochondrial membrane;6.29013610855562e-27!GO:0005654;nucleoplasm;2.57129867055326e-25!GO:0051649;establishment of cellular localization;3.39533697986922e-25!GO:0005681;spliceosome;3.91172101758044e-25!GO:0051641;cellular localization;4.56138460582309e-25!GO:0019866;organelle inner membrane;5.48168646938993e-25!GO:0022402;cell cycle process;1.04743731192703e-23!GO:0016462;pyrophosphatase activity;1.53588715250164e-23!GO:0005743;mitochondrial inner membrane;1.87673474613374e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.04597117673207e-23!GO:0000278;mitotic cell cycle;2.37702383638853e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;3.22483133034592e-23!GO:0017111;nucleoside-triphosphatase activity;1.09619648237007e-22!GO:0006974;response to DNA damage stimulus;1.69274040137852e-22!GO:0044445;cytosolic part;3.19031577218228e-22!GO:0003676;nucleic acid binding;1.25306294219361e-21!GO:0006119;oxidative phosphorylation;1.68681116644955e-21!GO:0015934;large ribosomal subunit;1.44961849976275e-20!GO:0005730;nucleolus;2.88834042987709e-20!GO:0032553;ribonucleotide binding;3.68367964405264e-20!GO:0032555;purine ribonucleotide binding;3.68367964405264e-20!GO:0044451;nucleoplasm part;4.65579980544984e-20!GO:0017076;purine nucleotide binding;6.08133618559117e-20!GO:0012505;endomembrane system;7.03853394714117e-20!GO:0031980;mitochondrial lumen;9.45232935844143e-20!GO:0005759;mitochondrial matrix;9.45232935844143e-20!GO:0016874;ligase activity;1.19833032988474e-19!GO:0015935;small ribosomal subunit;9.9268914757347e-19!GO:0006457;protein folding;1.17831497017157e-18!GO:0022618;protein-RNA complex assembly;1.83498626548945e-18!GO:0006281;DNA repair;2.52415648696898e-18!GO:0044455;mitochondrial membrane part;3.24121739119309e-18!GO:0000087;M phase of mitotic cell cycle;3.6079452820477e-18!GO:0006512;ubiquitin cycle;7.76804243116462e-18!GO:0007067;mitosis;7.95901243259336e-18!GO:0005694;chromosome;8.78575460705386e-18!GO:0048770;pigment granule;1.07690669439692e-17!GO:0042470;melanosome;1.07690669439692e-17!GO:0022403;cell cycle phase;1.41718164143068e-17!GO:0051301;cell division;1.5001099228401e-17!GO:0005524;ATP binding;4.71115319182423e-17!GO:0032559;adenyl ribonucleotide binding;6.48046585453793e-17!GO:0000502;proteasome complex (sensu Eukaryota);7.18844631593472e-17!GO:0044427;chromosomal part;1.17152785386479e-16!GO:0030554;adenyl nucleotide binding;1.60678039705995e-16!GO:0051186;cofactor metabolic process;2.0993772981313e-16!GO:0008135;translation factor activity, nucleic acid binding;3.23233601694591e-16!GO:0043285;biopolymer catabolic process;6.44717479095952e-16!GO:0005783;endoplasmic reticulum;8.8990050052637e-16!GO:0005746;mitochondrial respiratory chain;1.26704525105229e-15!GO:0044265;cellular macromolecule catabolic process;1.78017067116878e-15!GO:0016070;RNA metabolic process;1.97217142806602e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;2.18494167911e-15!GO:0005794;Golgi apparatus;2.37345388375096e-15!GO:0009719;response to endogenous stimulus;3.37215629278383e-15!GO:0006260;DNA replication;4.09717905365459e-15!GO:0019941;modification-dependent protein catabolic process;4.3155207085261e-15!GO:0043632;modification-dependent macromolecule catabolic process;4.3155207085261e-15!GO:0006511;ubiquitin-dependent protein catabolic process;4.66845691538793e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.38620544100062e-15!GO:0042254;ribosome biogenesis and assembly;7.35162074068871e-15!GO:0044257;cellular protein catabolic process;7.63582338128427e-15!GO:0000279;M phase;1.61781009277137e-14!GO:0005761;mitochondrial ribosome;1.95777737127657e-14!GO:0000313;organellar ribosome;1.95777737127657e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.38453060572448e-14!GO:0003954;NADH dehydrogenase activity;2.38453060572448e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.38453060572448e-14!GO:0012501;programmed cell death;2.71019409719899e-14!GO:0009057;macromolecule catabolic process;2.83370386229974e-14!GO:0051276;chromosome organization and biogenesis;3.03832984599581e-14!GO:0008134;transcription factor binding;3.03832984599581e-14!GO:0051082;unfolded protein binding;3.12272232881756e-14!GO:0044432;endoplasmic reticulum part;3.50425305752678e-14!GO:0006915;apoptosis;3.59057311952034e-14!GO:0030163;protein catabolic process;3.81958944476039e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;5.282502143646e-14!GO:0000375;RNA splicing, via transesterification reactions;5.282502143646e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.282502143646e-14!GO:0016192;vesicle-mediated transport;7.2157077210239e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.71186744726485e-14!GO:0043412;biopolymer modification;1.12926911028273e-13!GO:0048193;Golgi vesicle transport;1.29019124500374e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.6408948940374e-13!GO:0044248;cellular catabolic process;2.77548712994225e-13!GO:0006605;protein targeting;4.86638095330992e-13!GO:0005635;nuclear envelope;1.0877644428537e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.43270859109632e-12!GO:0042773;ATP synthesis coupled electron transport;1.43270859109632e-12!GO:0008219;cell death;1.45809042488588e-12!GO:0016265;death;1.45809042488588e-12!GO:0006732;coenzyme metabolic process;1.48105652434511e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.7758593410513e-12!GO:0045271;respiratory chain complex I;1.7758593410513e-12!GO:0005747;mitochondrial respiratory chain complex I;1.7758593410513e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.11810783132547e-12!GO:0009055;electron carrier activity;2.86927766314568e-12!GO:0008639;small protein conjugating enzyme activity;3.79249342962702e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.36467794402675e-12!GO:0044453;nuclear membrane part;4.62635477514547e-12!GO:0006464;protein modification process;4.85989852381021e-12!GO:0051726;regulation of cell cycle;5.25083694554464e-12!GO:0003743;translation initiation factor activity;5.69169522951071e-12!GO:0000074;regulation of progression through cell cycle;8.87581296755245e-12!GO:0004842;ubiquitin-protein ligase activity;9.29520266387903e-12!GO:0043687;post-translational protein modification;1.0849678960911e-11!GO:0006413;translational initiation;1.47615377297278e-11!GO:0031965;nuclear membrane;2.11777807979778e-11!GO:0019787;small conjugating protein ligase activity;2.28730444605352e-11!GO:0006461;protein complex assembly;3.00442742312771e-11!GO:0016887;ATPase activity;3.25582894279476e-11!GO:0006399;tRNA metabolic process;4.38352404305813e-11!GO:0042623;ATPase activity, coupled;7.7579078694966e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.13663015120127e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.39486582746997e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;9.46680438695959e-11!GO:0009259;ribonucleotide metabolic process;1.12112686328727e-10!GO:0042981;regulation of apoptosis;3.19778301980685e-10!GO:0016881;acid-amino acid ligase activity;3.20483699540343e-10!GO:0006323;DNA packaging;3.20680529843257e-10!GO:0006913;nucleocytoplasmic transport;3.61609925019324e-10!GO:0005789;endoplasmic reticulum membrane;3.61609925019324e-10!GO:0043067;regulation of programmed cell death;3.62619986398672e-10!GO:0006446;regulation of translational initiation;3.76769835641391e-10!GO:0006364;rRNA processing;4.25017005117457e-10!GO:0015630;microtubule cytoskeleton;5.36009600304826e-10!GO:0006163;purine nucleotide metabolic process;5.49901173445761e-10!GO:0005793;ER-Golgi intermediate compartment;6.75651817765162e-10!GO:0016072;rRNA metabolic process;6.92012076143672e-10!GO:0051169;nuclear transport;7.66579346910632e-10!GO:0005643;nuclear pore;8.23097390838654e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.41859974996194e-10!GO:0009260;ribonucleotide biosynthetic process;9.67200056870971e-10!GO:0004386;helicase activity;1.01394134753274e-09!GO:0048523;negative regulation of cellular process;1.09355435139093e-09!GO:0016604;nuclear body;1.26965947939448e-09!GO:0009150;purine ribonucleotide metabolic process;1.65278285350551e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.75716127906242e-09!GO:0006333;chromatin assembly or disassembly;2.02236662282257e-09!GO:0006164;purine nucleotide biosynthetic process;2.18002903903656e-09!GO:0050794;regulation of cellular process;2.85595620747882e-09!GO:0003712;transcription cofactor activity;2.96019573950482e-09!GO:0065004;protein-DNA complex assembly;3.74942443729052e-09!GO:0051188;cofactor biosynthetic process;3.84894873096501e-09!GO:0000785;chromatin;6.58451082948583e-09!GO:0009152;purine ribonucleotide biosynthetic process;6.58451082948583e-09!GO:0009199;ribonucleoside triphosphate metabolic process;7.59223477762495e-09!GO:0003924;GTPase activity;8.50167172009264e-09!GO:0009141;nucleoside triphosphate metabolic process;9.04312997143599e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.27438509702503e-09!GO:0008026;ATP-dependent helicase activity;1.34162956494934e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.51511659763023e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.51511659763023e-08!GO:0065002;intracellular protein transport across a membrane;1.83791923230195e-08!GO:0016779;nucleotidyltransferase activity;1.87629886441407e-08!GO:0006916;anti-apoptosis;1.95333213184517e-08!GO:0043069;negative regulation of programmed cell death;2.04676706676177e-08!GO:0008565;protein transporter activity;2.23690376797177e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.26986222413967e-08!GO:0006403;RNA localization;2.28565103436983e-08!GO:0050657;nucleic acid transport;2.31821768701581e-08!GO:0051236;establishment of RNA localization;2.31821768701581e-08!GO:0050658;RNA transport;2.31821768701581e-08!GO:0046930;pore complex;2.53434456998785e-08!GO:0015986;ATP synthesis coupled proton transport;2.69952993166384e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.69952993166384e-08!GO:0009060;aerobic respiration;2.77701282634783e-08!GO:0043066;negative regulation of apoptosis;3.04682137378477e-08!GO:0006888;ER to Golgi vesicle-mediated transport;3.13003640358409e-08!GO:0009117;nucleotide metabolic process;3.65256849292692e-08!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.66393126773418e-08!GO:0048519;negative regulation of biological process;4.66009463836398e-08!GO:0009142;nucleoside triphosphate biosynthetic process;5.14253977559762e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.14253977559762e-08!GO:0009056;catabolic process;5.34976864268694e-08!GO:0030120;vesicle coat;6.11435980877883e-08!GO:0030662;coated vesicle membrane;6.11435980877883e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.15424698625353e-08!GO:0004812;aminoacyl-tRNA ligase activity;6.15424698625353e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.15424698625353e-08!GO:0006334;nucleosome assembly;6.16341635133537e-08!GO:0005768;endosome;6.16341635133537e-08!GO:0006366;transcription from RNA polymerase II promoter;6.78893741877396e-08!GO:0000775;chromosome, pericentric region;8.0608555846909e-08!GO:0046034;ATP metabolic process;9.79305270464951e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.01597030163615e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.01597030163615e-07!GO:0051246;regulation of protein metabolic process;1.18602381876253e-07!GO:0019829;cation-transporting ATPase activity;1.19832855189563e-07!GO:0016740;transferase activity;1.25073517698988e-07!GO:0031497;chromatin assembly;1.40334399219808e-07!GO:0032446;protein modification by small protein conjugation;1.50061784075294e-07!GO:0043038;amino acid activation;1.52678136461351e-07!GO:0006418;tRNA aminoacylation for protein translation;1.52678136461351e-07!GO:0043039;tRNA aminoacylation;1.52678136461351e-07!GO:0017038;protein import;1.72743137789491e-07!GO:0016607;nuclear speck;1.89836515080691e-07!GO:0016567;protein ubiquitination;2.09732493409377e-07!GO:0009108;coenzyme biosynthetic process;2.10902486955842e-07!GO:0048475;coated membrane;2.33590356323977e-07!GO:0030117;membrane coat;2.33590356323977e-07!GO:0003697;single-stranded DNA binding;3.26330014155849e-07!GO:0000245;spliceosome assembly;4.43553447010591e-07!GO:0007005;mitochondrion organization and biogenesis;4.6462413737068e-07!GO:0045333;cellular respiration;4.65446520493028e-07!GO:0006099;tricarboxylic acid cycle;5.78052152442357e-07!GO:0046356;acetyl-CoA catabolic process;5.78052152442357e-07!GO:0006754;ATP biosynthetic process;6.04925923019542e-07!GO:0006753;nucleoside phosphate metabolic process;6.04925923019542e-07!GO:0006084;acetyl-CoA metabolic process;8.11897562451732e-07!GO:0043623;cellular protein complex assembly;8.72968399022505e-07!GO:0015078;hydrogen ion transmembrane transporter activity;9.14434124195689e-07!GO:0043566;structure-specific DNA binding;9.2366114456676e-07!GO:0044431;Golgi apparatus part;9.81395050560107e-07!GO:0007051;spindle organization and biogenesis;1.00204301456222e-06!GO:0031252;leading edge;1.01897743962288e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.02906173110775e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.06837202225305e-06!GO:0007010;cytoskeleton organization and biogenesis;1.17736048486806e-06!GO:0005819;spindle;1.39245588903671e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.4196297146396e-06!GO:0051028;mRNA transport;1.54336664384111e-06!GO:0051187;cofactor catabolic process;1.54336664384111e-06!GO:0000151;ubiquitin ligase complex;1.5704211925128e-06!GO:0005813;centrosome;2.52849878128913e-06!GO:0006261;DNA-dependent DNA replication;2.6357193762921e-06!GO:0050789;regulation of biological process;2.70172302210663e-06!GO:0044440;endosomal part;2.76946920209443e-06!GO:0010008;endosome membrane;2.76946920209443e-06!GO:0006793;phosphorus metabolic process;3.15279002219717e-06!GO:0006796;phosphate metabolic process;3.15279002219717e-06!GO:0016491;oxidoreductase activity;3.35197302225866e-06!GO:0009109;coenzyme catabolic process;3.84406464836088e-06!GO:0005762;mitochondrial large ribosomal subunit;4.38512229229353e-06!GO:0000315;organellar large ribosomal subunit;4.38512229229353e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.53430226355753e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.59064584791705e-06!GO:0005815;microtubule organizing center;4.80563153822322e-06!GO:0005525;GTP binding;5.09812452472594e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.29702002721215e-06!GO:0016787;hydrolase activity;6.15984560472013e-06!GO:0016023;cytoplasmic membrane-bound vesicle;6.1599905434381e-06!GO:0031988;membrane-bound vesicle;7.41317618366035e-06!GO:0005798;Golgi-associated vesicle;8.53820295289252e-06!GO:0045259;proton-transporting ATP synthase complex;8.53820295289252e-06!GO:0016568;chromatin modification;8.72754826222049e-06!GO:0005667;transcription factor complex;8.87963529706964e-06!GO:0016310;phosphorylation;9.73875064630122e-06!GO:0005788;endoplasmic reticulum lumen;9.82829381411011e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.00529903590942e-05!GO:0006613;cotranslational protein targeting to membrane;1.07145346386508e-05!GO:0006752;group transfer coenzyme metabolic process;1.24090241544969e-05!GO:0004298;threonine endopeptidase activity;1.26352015169032e-05!GO:0051329;interphase of mitotic cell cycle;1.29497367788546e-05!GO:0000075;cell cycle checkpoint;1.38284093441797e-05!GO:0051325;interphase;1.97912231851746e-05!GO:0003714;transcription corepressor activity;2.31168913222591e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.50871129667539e-05!GO:0003899;DNA-directed RNA polymerase activity;2.70688112802093e-05!GO:0045786;negative regulation of progression through cell cycle;2.87194750451749e-05!GO:0043021;ribonucleoprotein binding;3.13734763670824e-05!GO:0019899;enzyme binding;3.71074792020683e-05!GO:0032561;guanyl ribonucleotide binding;3.74249025660356e-05!GO:0019001;guanyl nucleotide binding;3.74249025660356e-05!GO:0000139;Golgi membrane;4.50457000288626e-05!GO:0031968;organelle outer membrane;4.51024674533417e-05!GO:0006302;double-strand break repair;4.51393207332545e-05!GO:0009165;nucleotide biosynthetic process;4.91484862692232e-05!GO:0016853;isomerase activity;5.22515132229015e-05!GO:0003724;RNA helicase activity;5.23391863710481e-05!GO:0051170;nuclear import;5.23483992378004e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.45118166686098e-05!GO:0019867;outer membrane;5.55682140107792e-05!GO:0008654;phospholipid biosynthetic process;6.4614097627488e-05!GO:0048522;positive regulation of cellular process;6.71056217564332e-05!GO:0005769;early endosome;7.01852495740705e-05!GO:0030036;actin cytoskeleton organization and biogenesis;7.19462981558259e-05!GO:0005905;coated pit;7.2395898097018e-05!GO:0005657;replication fork;7.89956589297807e-05!GO:0003684;damaged DNA binding;8.34188123475989e-05!GO:0030867;rough endoplasmic reticulum membrane;8.91370078079343e-05!GO:0005773;vacuole;0.000108146582523319!GO:0051168;nuclear export;0.000121682263200509!GO:0031982;vesicle;0.000125710464219655!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000126960888305929!GO:0006606;protein import into nucleus;0.000134494045861224!GO:0001558;regulation of cell growth;0.000137724194792242!GO:0008094;DNA-dependent ATPase activity;0.000139922954770777!GO:0008033;tRNA processing;0.000141971672690743!GO:0031410;cytoplasmic vesicle;0.000143851502103514!GO:0051427;hormone receptor binding;0.000145500936992542!GO:0005874;microtubule;0.000151077564866239!GO:0015980;energy derivation by oxidation of organic compounds;0.000157759290934303!GO:0016564;transcription repressor activity;0.000171381555216069!GO:0008361;regulation of cell size;0.000174015830153882!GO:0031324;negative regulation of cellular metabolic process;0.000175376702079923!GO:0007088;regulation of mitosis;0.000182503406010914!GO:0016049;cell growth;0.000186958700735265!GO:0016363;nuclear matrix;0.00021103418500142!GO:0000786;nucleosome;0.000221775895819701!GO:0005770;late endosome;0.000226901462919146!GO:0005048;signal sequence binding;0.000236148232436371!GO:0043681;protein import into mitochondrion;0.000238805123021945!GO:0044452;nucleolar part;0.000243837376527498!GO:0000314;organellar small ribosomal subunit;0.000257556668158818!GO:0005763;mitochondrial small ribosomal subunit;0.000257556668158818!GO:0042802;identical protein binding;0.000269668010000425!GO:0051789;response to protein stimulus;0.000272904210457297!GO:0006986;response to unfolded protein;0.000272904210457297!GO:0035257;nuclear hormone receptor binding;0.000310203673387678!GO:0006091;generation of precursor metabolites and energy;0.000316538377586075!GO:0008092;cytoskeletal protein binding;0.000319211110963295!GO:0006626;protein targeting to mitochondrion;0.000323898728985387!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000345359665534539!GO:0000776;kinetochore;0.000346829448826961!GO:0045454;cell redox homeostasis;0.000351075777413254!GO:0007243;protein kinase cascade;0.000356360959322974!GO:0001726;ruffle;0.000360314896759196!GO:0030880;RNA polymerase complex;0.000400076349891974!GO:0006612;protein targeting to membrane;0.000402306061201762!GO:0005741;mitochondrial outer membrane;0.000407071933027983!GO:0051252;regulation of RNA metabolic process;0.000430143421437554!GO:0003713;transcription coactivator activity;0.000435106582377392!GO:0007059;chromosome segregation;0.000442507174400024!GO:0003682;chromatin binding;0.000461420740456285!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000467447554319575!GO:0016197;endosome transport;0.00047863051435633!GO:0033116;ER-Golgi intermediate compartment membrane;0.000484164873133171!GO:0048468;cell development;0.000486492696929441!GO:0030031;cell projection biogenesis;0.000494007387768259!GO:0005885;Arp2/3 protein complex;0.000504361487825026!GO:0016044;membrane organization and biogenesis;0.000531791409900955!GO:0015631;tubulin binding;0.000548257771743923!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000548482916253572!GO:0030029;actin filament-based process;0.00056336476394703!GO:0006414;translational elongation;0.000589822164377821!GO:0007093;mitotic cell cycle checkpoint;0.00060623692889729!GO:0000323;lytic vacuole;0.000629003854070231!GO:0005764;lysosome;0.000629003854070231!GO:0004674;protein serine/threonine kinase activity;0.000641406830300827!GO:0009112;nucleobase metabolic process;0.000689091481420733!GO:0016563;transcription activator activity;0.000748211152941378!GO:0008250;oligosaccharyl transferase complex;0.000760085761413543!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000765663870188001!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.000773085880290903!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000781345876169404!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000781345876169404!GO:0006383;transcription from RNA polymerase III promoter;0.000790654860823336!GO:0051052;regulation of DNA metabolic process;0.000790952752279994!GO:0032508;DNA duplex unwinding;0.000800303186059027!GO:0032392;DNA geometric change;0.000800303186059027!GO:0003729;mRNA binding;0.000827802170497253!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000859600906010431!GO:0000428;DNA-directed RNA polymerase complex;0.000859600906010431!GO:0009892;negative regulation of metabolic process;0.00087136513668484!GO:0006310;DNA recombination;0.000986210274358732!GO:0030658;transport vesicle membrane;0.00100193702211914!GO:0006839;mitochondrial transport;0.00101407233841823!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0010259601501597!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00102960383853026!GO:0006268;DNA unwinding during replication;0.00107370203245808!GO:0051920;peroxiredoxin activity;0.00107719066341813!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00109585883524446!GO:0043065;positive regulation of apoptosis;0.00112191886631492!GO:0008186;RNA-dependent ATPase activity;0.00114403222475356!GO:0003690;double-stranded DNA binding;0.00116921174667147!GO:0043284;biopolymer biosynthetic process;0.00117907633725389!GO:0007052;mitotic spindle organization and biogenesis;0.00118254229215048!GO:0016126;sterol biosynthetic process;0.00119071824299425!GO:0003746;translation elongation factor activity;0.00125271642604227!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00133124943249549!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00133124943249549!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00133124943249549!GO:0019222;regulation of metabolic process;0.00137251744054363!GO:0043068;positive regulation of programmed cell death;0.00137443396000381!GO:0003678;DNA helicase activity;0.00139964282905036!GO:0007017;microtubule-based process;0.00140826107379041!GO:0030118;clathrin coat;0.00142983183154421!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00150916067936032!GO:0018196;peptidyl-asparagine modification;0.001575766248723!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.001575766248723!GO:0046483;heterocycle metabolic process;0.00157838143018401!GO:0030133;transport vesicle;0.00168601177737623!GO:0048500;signal recognition particle;0.00170921918218331!GO:0040008;regulation of growth;0.00172314935012816!GO:0006401;RNA catabolic process;0.00180185794805332!GO:0006402;mRNA catabolic process;0.0018464141008703!GO:0016859;cis-trans isomerase activity;0.00210415937288115!GO:0006950;response to stress;0.00210415937288115!GO:0031124;mRNA 3'-end processing;0.00218504805619931!GO:0030663;COPI coated vesicle membrane;0.0022066643590849!GO:0030126;COPI vesicle coat;0.0022066643590849!GO:0005684;U2-dependent spliceosome;0.00230267252791406!GO:0065007;biological regulation;0.00232343865954849!GO:0007264;small GTPase mediated signal transduction;0.00233142587015413!GO:0007006;mitochondrial membrane organization and biogenesis;0.0023400410150317!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00236631466680581!GO:0008047;enzyme activator activity;0.00238619092551057!GO:0043488;regulation of mRNA stability;0.00239341410549025!GO:0043487;regulation of RNA stability;0.00239341410549025!GO:0016301;kinase activity;0.00248441205951566!GO:0004576;oligosaccharyl transferase activity;0.00254376256614138!GO:0030660;Golgi-associated vesicle membrane;0.00262656917057189!GO:0035258;steroid hormone receptor binding;0.0027473372313561!GO:0048518;positive regulation of biological process;0.00275249032097667!GO:0030134;ER to Golgi transport vesicle;0.00286059657477888!GO:0008312;7S RNA binding;0.00290864572509432!GO:0051540;metal cluster binding;0.00290864572509432!GO:0051536;iron-sulfur cluster binding;0.00290864572509432!GO:0048487;beta-tubulin binding;0.00293698984960455!GO:0008632;apoptotic program;0.00295105125712691!GO:0004004;ATP-dependent RNA helicase activity;0.00295606697366143!GO:0006405;RNA export from nucleus;0.00296151730958649!GO:0046474;glycerophospholipid biosynthetic process;0.00296319632076582!GO:0051287;NAD binding;0.00311509284810349!GO:0019843;rRNA binding;0.00312058456223137!GO:0030137;COPI-coated vesicle;0.0031786053012984!GO:0030132;clathrin coat of coated pit;0.00330998624712633!GO:0000059;protein import into nucleus, docking;0.00344429540400823!GO:0006289;nucleotide-excision repair;0.00351119803571533!GO:0009116;nucleoside metabolic process;0.00354792027506105!GO:0005791;rough endoplasmic reticulum;0.00356805354502804!GO:0000910;cytokinesis;0.00374119474471526!GO:0030027;lamellipodium;0.00374961097517554!GO:0048471;perinuclear region of cytoplasm;0.00381428589406895!GO:0006695;cholesterol biosynthetic process;0.00405076231692027!GO:0051087;chaperone binding;0.00429826662876264!GO:0045792;negative regulation of cell size;0.00434585138723847!GO:0016481;negative regulation of transcription;0.00436441406414746!GO:0030119;AP-type membrane coat adaptor complex;0.00437150882838658!GO:0030176;integral to endoplasmic reticulum membrane;0.00457200431453689!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00458855198522181!GO:0006891;intra-Golgi vesicle-mediated transport;0.00458855198522181!GO:0017166;vinculin binding;0.00472959954500572!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00511343782731096!GO:0045047;protein targeting to ER;0.00511343782731096!GO:0005876;spindle microtubule;0.0051268617703124!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00516494048765136!GO:0015399;primary active transmembrane transporter activity;0.00516494048765136!GO:0030308;negative regulation of cell growth;0.00526129692237069!GO:0008139;nuclear localization sequence binding;0.00528327423044049!GO:0008180;signalosome;0.00530674854509484!GO:0031072;heat shock protein binding;0.00531317838049406!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00531923458020133!GO:0005096;GTPase activator activity;0.00544646316388971!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00553722229546431!GO:0065009;regulation of a molecular function;0.00559460299776635!GO:0008022;protein C-terminus binding;0.00587777882144098!GO:0000082;G1/S transition of mitotic cell cycle;0.00592989993173707!GO:0050662;coenzyme binding;0.00596281372198327!GO:0004527;exonuclease activity;0.00601191164988977!GO:0006984;ER-nuclear signaling pathway;0.00616014022767548!GO:0006378;mRNA polyadenylation;0.00616014022767548!GO:0045045;secretory pathway;0.00652031158072375!GO:0042770;DNA damage response, signal transduction;0.00654618445296861!GO:0030125;clathrin vesicle coat;0.00655423725228303!GO:0030665;clathrin coated vesicle membrane;0.00655423725228303!GO:0046467;membrane lipid biosynthetic process;0.0067694720238462!GO:0003711;transcription elongation regulator activity;0.00691685950018491!GO:0006220;pyrimidine nucleotide metabolic process;0.00692824697330199!GO:0046489;phosphoinositide biosynthetic process;0.00693442126885858!GO:0030521;androgen receptor signaling pathway;0.00697908474002968!GO:0019206;nucleoside kinase activity;0.00699684193758946!GO:0006595;polyamine metabolic process;0.0071025126530468!GO:0004177;aminopeptidase activity;0.00761019954357872!GO:0032984;macromolecular complex disassembly;0.0077533854639055!GO:0031123;RNA 3'-end processing;0.0077533854639055!GO:0016272;prefoldin complex;0.0077940937102217!GO:0030131;clathrin adaptor complex;0.00808136638155366!GO:0006284;base-excision repair;0.00822961123025885!GO:0005832;chaperonin-containing T-complex;0.00837542286252506!GO:0030032;lamellipodium biogenesis;0.00849265309439875!GO:0043624;cellular protein complex disassembly;0.00864280250621996!GO:0006818;hydrogen transport;0.00891454379309225!GO:0030127;COPII vesicle coat;0.00932758421161471!GO:0012507;ER to Golgi transport vesicle membrane;0.00932758421161471!GO:0043241;protein complex disassembly;0.009462150540382!GO:0015992;proton transport;0.00957376022129755!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00959273011823636!GO:0006354;RNA elongation;0.00989449966097465!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00989922417648467!GO:0000049;tRNA binding;0.0100717650754223!GO:0044262;cellular carbohydrate metabolic process;0.0100717650754223!GO:0006144;purine base metabolic process;0.0101008270553756!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0102138775142284!GO:0000209;protein polyubiquitination;0.010216040144448!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0105291780945331!GO:0031901;early endosome membrane;0.0109428035208131!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0109955992202051!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0109955992202051!GO:0005869;dynactin complex;0.0113593774992916!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0114184498779189!GO:0047485;protein N-terminus binding;0.0114660198092989!GO:0005862;muscle thin filament tropomyosin;0.0120681987924134!GO:0006778;porphyrin metabolic process;0.0122160654996023!GO:0033013;tetrapyrrole metabolic process;0.0122160654996023!GO:0043022;ribosome binding;0.0122962706874886!GO:0030659;cytoplasmic vesicle membrane;0.0122962706874886!GO:0006509;membrane protein ectodomain proteolysis;0.0122962706874886!GO:0033619;membrane protein proteolysis;0.0122962706874886!GO:0009262;deoxyribonucleotide metabolic process;0.0125397549968497!GO:0016408;C-acyltransferase activity;0.0127027975188246!GO:0050681;androgen receptor binding;0.0128295881313546!GO:0006733;oxidoreduction coenzyme metabolic process;0.0133846035424359!GO:0007050;cell cycle arrest;0.0135441135738609!GO:0006740;NADPH regeneration;0.013591206540615!GO:0006098;pentose-phosphate shunt;0.013591206540615!GO:0007021;tubulin folding;0.0140623552419891!GO:0006611;protein export from nucleus;0.0140895587863184!GO:0031570;DNA integrity checkpoint;0.0142233978120212!GO:0006650;glycerophospholipid metabolic process;0.0143661454206126!GO:0008610;lipid biosynthetic process;0.0144649870917078!GO:0008243;plasminogen activator activity;0.0145707210314935!GO:0051539;4 iron, 4 sulfur cluster binding;0.0146658483498914!GO:0031625;ubiquitin protein ligase binding;0.0148221204568816!GO:0007346;regulation of progression through mitotic cell cycle;0.015336073614677!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0155254535603324!GO:0004518;nuclease activity;0.0155254535603324!GO:0008629;induction of apoptosis by intracellular signals;0.0157916182076676!GO:0000339;RNA cap binding;0.0160360462082367!GO:0006376;mRNA splice site selection;0.0163043043480774!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0163043043480774!GO:0045893;positive regulation of transcription, DNA-dependent;0.0163289779067482!GO:0016776;phosphotransferase activity, phosphate group as acceptor;0.0163377119623492!GO:0006352;transcription initiation;0.0165252537225118!GO:0045941;positive regulation of transcription;0.0165252537225118!GO:0006897;endocytosis;0.0177135934514199!GO:0010324;membrane invagination;0.0177135934514199!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0182790643084239!GO:0032200;telomere organization and biogenesis;0.0184540392350099!GO:0000723;telomere maintenance;0.0184540392350099!GO:0007034;vacuolar transport;0.0187828723858967!GO:0006275;regulation of DNA replication;0.0189911815115767!GO:0043596;nuclear replication fork;0.019016662094444!GO:0005637;nuclear inner membrane;0.0193324771617434!GO:0044433;cytoplasmic vesicle part;0.0194405318986196!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0194725700278722!GO:0005100;Rho GTPase activator activity;0.0204444204782486!GO:0008601;protein phosphatase type 2A regulator activity;0.0208089856124725!GO:0006270;DNA replication initiation;0.0208305878808966!GO:0042168;heme metabolic process;0.0208305878808966!GO:0006417;regulation of translation;0.0208650700400526!GO:0031902;late endosome membrane;0.0211391073956893!GO:0045926;negative regulation of growth;0.0213485459929179!GO:0004748;ribonucleoside-diphosphate reductase activity;0.021574035849526!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.021574035849526!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0217389832296577!GO:0006769;nicotinamide metabolic process;0.0217483974861379!GO:0000902;cell morphogenesis;0.0217483974861379!GO:0032989;cellular structure morphogenesis;0.0217483974861379!GO:0022890;inorganic cation transmembrane transporter activity;0.0218802894774695!GO:0051656;establishment of organelle localization;0.0229912506371692!GO:0030518;steroid hormone receptor signaling pathway;0.0229912506371692!GO:0043492;ATPase activity, coupled to movement of substances;0.0230057329286377!GO:0031529;ruffle organization and biogenesis;0.0231581511024739!GO:0008538;proteasome activator activity;0.0233981688194109!GO:0009451;RNA modification;0.0234297536082656!GO:0000070;mitotic sister chromatid segregation;0.0239786317279874!GO:0009119;ribonucleoside metabolic process;0.023992747052786!GO:0000781;chromosome, telomeric region;0.0243393568031434!GO:0033673;negative regulation of kinase activity;0.0246443546288091!GO:0006469;negative regulation of protein kinase activity;0.0246443546288091!GO:0016584;nucleosome positioning;0.0247363919913508!GO:0031970;organelle envelope lumen;0.0248675285272373!GO:0042393;histone binding;0.0253358845636386!GO:0006892;post-Golgi vesicle-mediated transport;0.0257180888878567!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0259620914741136!GO:0005938;cell cortex;0.026396607912074!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0268047895851442!GO:0015002;heme-copper terminal oxidase activity;0.0268047895851442!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0268047895851442!GO:0004129;cytochrome-c oxidase activity;0.0268047895851442!GO:0007265;Ras protein signal transduction;0.0268852963863715!GO:0046519;sphingoid metabolic process;0.0272306492297247!GO:0043189;H4/H2A histone acetyltransferase complex;0.027283456728258!GO:0006672;ceramide metabolic process;0.027283456728258!GO:0006221;pyrimidine nucleotide biosynthetic process;0.0278564163518183!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0279405848090733!GO:0005758;mitochondrial intermembrane space;0.0279834706828322!GO:0000819;sister chromatid segregation;0.028412436921413!GO:0031577;spindle checkpoint;0.028663195381637!GO:0009303;rRNA transcription;0.0294075820536594!GO:0033559;unsaturated fatty acid metabolic process;0.0295414926277249!GO:0006636;unsaturated fatty acid biosynthetic process;0.0295414926277249!GO:0008234;cysteine-type peptidase activity;0.0296084134593925!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.02981400669692!GO:0012506;vesicle membrane;0.0304128646538226!GO:0043631;RNA polyadenylation;0.0307984819462178!GO:0051348;negative regulation of transferase activity;0.0313203451458475!GO:0006979;response to oxidative stress;0.031853692037135!GO:0016741;transferase activity, transferring one-carbon groups;0.031853692037135!GO:0000726;non-recombinational repair;0.0320771171278399!GO:0006779;porphyrin biosynthetic process;0.0320771171278399!GO:0033014;tetrapyrrole biosynthetic process;0.0320771171278399!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0320771171278399!GO:0009967;positive regulation of signal transduction;0.0321649983022268!GO:0016407;acetyltransferase activity;0.0321649983022268!GO:0004532;exoribonuclease activity;0.0321649983022268!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0321649983022268!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0321711301296719!GO:0031371;ubiquitin conjugating enzyme complex;0.0324360131188526!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0325952570490808!GO:0003923;GPI-anchor transamidase activity;0.0325952570490808!GO:0016255;attachment of GPI anchor to protein;0.0325952570490808!GO:0042765;GPI-anchor transamidase complex;0.0325952570490808!GO:0030496;midbody;0.0326845247012731!GO:0004523;ribonuclease H activity;0.0326900753533894!GO:0000792;heterochromatin;0.0328704203926626!GO:0030384;phosphoinositide metabolic process;0.0334889257443267!GO:0005092;GDP-dissociation inhibitor activity;0.033686706433517!GO:0000725;recombinational repair;0.0338992817768635!GO:0000724;double-strand break repair via homologous recombination;0.0338992817768635!GO:0005784;translocon complex;0.0339385997411896!GO:0004003;ATP-dependent DNA helicase activity;0.0341287811778233!GO:0006917;induction of apoptosis;0.0341287811778233!GO:0000077;DNA damage checkpoint;0.0345213824371495!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0345213824371495!GO:0046112;nucleobase biosynthetic process;0.0346154646801392!GO:0022406;membrane docking;0.0346548390125758!GO:0048278;vesicle docking;0.0346548390125758!GO:0008168;methyltransferase activity;0.0349956206485479!GO:0000118;histone deacetylase complex;0.0352400529633345!GO:0042026;protein refolding;0.0353388146072004!GO:0006400;tRNA modification;0.03568858065524!GO:0009124;nucleoside monophosphate biosynthetic process;0.0358814152953968!GO:0009123;nucleoside monophosphate metabolic process;0.0358814152953968!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0365982731076176!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0370673326990597!GO:0008017;microtubule binding;0.0379674073931037!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0379777955006051!GO:0010257;NADH dehydrogenase complex assembly;0.0379777955006051!GO:0033108;mitochondrial respiratory chain complex assembly;0.0379777955006051!GO:0005083;small GTPase regulator activity;0.0381342263798311!GO:0035035;histone acetyltransferase binding;0.0381342263798311!GO:0030695;GTPase regulator activity;0.0381807022531!GO:0051537;2 iron, 2 sulfur cluster binding;0.039103182688676!GO:0017134;fibroblast growth factor binding;0.0392771689939803!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0393229615037993!GO:0031323;regulation of cellular metabolic process;0.0393968169255426!GO:0012502;induction of programmed cell death;0.0394197119372325!GO:0019362;pyridine nucleotide metabolic process;0.0394893624695901!GO:0006767;water-soluble vitamin metabolic process;0.0396291333442462!GO:0043601;nuclear replisome;0.0400353871963857!GO:0030894;replisome;0.0400353871963857!GO:0035267;NuA4 histone acetyltransferase complex;0.0403123166304525!GO:0006904;vesicle docking during exocytosis;0.0406974205835233!GO:0006007;glucose catabolic process;0.0413655874558357!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0422339492931492!GO:0043130;ubiquitin binding;0.0429506165420374!GO:0032182;small conjugating protein binding;0.0429506165420374!GO:0000178;exosome (RNase complex);0.0433960349651732!GO:0000922;spindle pole;0.0436818840201923!GO:0030433;ER-associated protein catabolic process;0.0437439348666085!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0437439348666085!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0441577461733079!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0444725775278208!GO:0006497;protein amino acid lipidation;0.0444725775278208!GO:0051338;regulation of transferase activity;0.0444725775278208!GO:0008287;protein serine/threonine phosphatase complex;0.0445252553067184!GO:0048037;cofactor binding;0.0445459936405255!GO:0008408;3'-5' exonuclease activity;0.0448055558068649!GO:0006213;pyrimidine nucleoside metabolic process;0.0448275305205913!GO:0000152;nuclear ubiquitin ligase complex;0.0456631155117403!GO:0005669;transcription factor TFIID complex;0.0457016980555873!GO:0008637;apoptotic mitochondrial changes;0.0460598503325251!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0461546395607543!GO:0016251;general RNA polymerase II transcription factor activity;0.0465964033225387!GO:0007242;intracellular signaling cascade;0.0468342211074064!GO:0006541;glutamine metabolic process;0.0468436605484422!GO:0007040;lysosome organization and biogenesis;0.0469512825803819!GO:0032906;transforming growth factor-beta2 production;0.0470157390344706!GO:0032909;regulation of transforming growth factor-beta2 production;0.0470157390344706!GO:0000228;nuclear chromosome;0.0479700554893014!GO:0030911;TPR domain binding;0.0479700554893014!GO:0032940;secretion by cell;0.0481668975159818!GO:0051098;regulation of binding;0.0481668975159818!GO:0007033;vacuole organization and biogenesis;0.0481792304901225!GO:0003779;actin binding;0.0490010368789137!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0492325238226531!GO:0022415;viral reproductive process;0.0492325238226531!GO:0006338;chromatin remodeling;0.0499597196429877
|sample_id=10847
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=mesothelium
|top_motifs=TFDP1:1.44486769724;PDX1:1.4385495834;HSF1,2:1.39778702021;ARID5B:1.37963097719;NKX3-1:1.33402138999;AIRE:1.08150190429;ADNP_IRX_SIX_ZHX:1.04688977828;NFE2L1:1.03203528966;TP53:1.00758336219;FOX{I1,J2}:0.959635149258;POU1F1:0.940296938632;E2F1..5:0.932474812081;HOXA9_MEIS1:0.911455793957;bHLH_family:0.894145235776;XCPE1{core}:0.860909477493;TEAD1:0.817972161919;HES1:0.815348829854;HOX{A4,D4}:0.763520981313;PAX5:0.761649335847;EN1,2:0.735355891352;ZBTB16:0.717428121985;GZF1:0.686557153779;FOXQ1:0.684823346718;GFI1:0.643260896806;NKX3-2:0.609570670525;ZNF143:0.594684442409;UFEwm:0.536014111829;POU5F1:0.534255279927;HOX{A5,B5}:0.524653234212;TEF:0.505860980999;ZBTB6:0.505225486431;GCM1,2:0.497188187619;PAX6:0.490149149465;EVI1:0.4847449107;HBP1_HMGB_SSRP1_UBTF:0.463724630683;GATA4:0.458824537335;NFY{A,B,C}:0.458422032751;GFI1B:0.454303758438;EP300:0.45232341736;FOXL1:0.417660943989;HLF:0.400257056358;RXRA_VDR{dimer}:0.377149081428;OCT4_SOX2{dimer}:0.364169611273;BREu{core}:0.350150807105;TFAP2B:0.345229847431;SP1:0.342229903093;HIC1:0.306848744969;POU3F1..4:0.294844864804;MYB:0.286161847113;BACH2:0.286104103168;HOX{A6,A7,B6,B7}:0.256627122463;SPZ1:0.253067453996;ONECUT1,2:0.249451674974;NFIX:0.248345396184;MZF1:0.242873322117;FOXM1:0.222867512406;NFE2:0.215212821891;FOS_FOS{B,L1}_JUN{B,D}:0.190462312363;ZIC1..3:0.179212123649;STAT5{A,B}:0.172471282074;SRF:0.151820901648;NR3C1:0.142829089775;EGR1..3:0.135975610105;KLF4:0.134635733026;NRF1:0.125635666033;PRRX1,2:0.116445424101;FOSL2:0.109967633431;CDX1,2,4:0.105750137073;STAT2,4,6:0.0982789851432;ELK1,4_GABP{A,B1}:0.0837227768712;LHX3,4:0.0735543821551;CDC5L:0.0471448133692;TLX1..3_NFIC{dimer}:0.0470718877775;RXR{A,B,G}:0.0438948677022;PRDM1:0.0399761206336;ZNF384:0.0398899607252;ZFP161:0.0193566259983;MAFB:0.0080453002126;LEF1_TCF7_TCF7L1,2:0.00770367630673;MTF1:-0.00345527929072;GTF2A1,2:-0.0096497736066;FOXD3:-0.0115325672034;SOX{8,9,10}:-0.0177177120925;DMAP1_NCOR{1,2}_SMARC:-0.0247710529092;MTE{core}:-0.036273275198;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.0443148307693;IKZF2:-0.045439146957;NR6A1:-0.0495670701542;GTF2I:-0.0540012217186;MAZ:-0.0574556646518;LMO2:-0.0742059092692;FOXO1,3,4:-0.0827548755488;MYBL2:-0.108967872307;CEBPA,B_DDIT3:-0.109389847828;NKX2-1,4:-0.117473838884;PAX4:-0.120640304364;TBP:-0.122262930143;HMX1:-0.130386209847;HNF1A:-0.137205507108;AHR_ARNT_ARNT2:-0.139442975632;ESRRA:-0.14508446858;SNAI1..3:-0.161990231826;PPARG:-0.167629694765;ZNF148:-0.16956464707;NKX2-2,8:-0.177859794773;HMGA1,2:-0.186156030316;HNF4A_NR2F1,2:-0.191462327107;PITX1..3:-0.1917083608;RBPJ:-0.221945158345;MED-1{core}:-0.23002804459;TOPORS:-0.254047098192;FOXA2:-0.264405359184;CUX2:-0.268527443054;EBF1:-0.270732613335;IRF1,2:-0.27095566121;NFE2L2:-0.283029620496;SOX17:-0.284294926398;PAX1,9:-0.298254818929;AR:-0.298351854258;ALX1:-0.301702136832;MYOD1:-0.316224599806;ESR1:-0.31875752897;PATZ1:-0.326940542072;TFAP4:-0.338978538677;ETS1,2:-0.351333365067;SPIB:-0.35161804774;NFATC1..3:-0.36396301368;IRF7:-0.366011882333;RREB1:-0.367161252034;YY1:-0.374488714262;POU2F1..3:-0.376415344182;NFKB1_REL_RELA:-0.377757917508;ELF1,2,4:-0.384052878323;GATA6:-0.386418847927;FOXP1:-0.395536383417;PAX3,7:-0.39910147962;XBP1:-0.403012041519;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.432603626229;HIF1A:-0.434096264403;TFCP2:-0.436200296939;RFX1:-0.43774745483;RUNX1..3:-0.440267688168;PBX1:-0.45762997921;JUN:-0.463757292397;TAL1_TCF{3,4,12}:-0.464704990996;SMAD1..7,9:-0.477083446808;NHLH1,2:-0.485051043712;T:-0.490623778389;REST:-0.512262622864;IKZF1:-0.516745853241;NFIL3:-0.551100108705;MYFfamily:-0.554545546592;TBX4,5:-0.555598811228;MEF2{A,B,C,D}:-0.557136187797;ZEB1:-0.558050013082;ATF6:-0.571968711614;SPI1:-0.580903263158;ATF5_CREB3:-0.610685519137;POU6F1:-0.622148889641;ALX4:-0.624605419632;ZNF423:-0.642478248235;TFAP2{A,C}:-0.662066110439;NKX6-1,2:-0.665671910682;STAT1,3:-0.684338494165;NR1H4:-0.686160569883;SOX2:-0.693815263425;PAX8:-0.716790168064;TGIF1:-0.725857434217;NR5A1,2:-0.730134184036;NANOG:-0.795087095433;VSX1,2:-0.799945876108;RFX2..5_RFXANK_RFXAP:-0.815881018388;FOX{D1,D2}:-0.819902084737;GLI1..3:-0.832770558198;FOX{F1,F2,J1}:-0.840220584707;CREB1:-0.856649961255;NKX2-3_NKX2-5:-0.864186974329;DBP:-0.872560656038;ATF4:-0.890090852687;FOXN1:-0.905937305792;SREBF1,2:-0.915667481986;ZNF238:-0.95605716299;PAX2:-0.956086665857;SOX5:-0.982861951911;FOXP3:-0.984467286471;ATF2:-1.03506172092;HAND1,2:-1.04939390214;CRX:-1.11626567004;BPTF:-1.30238790445;RORA:-1.50136896424;TLX2:-2.05107233745;NANOG{mouse}:-2.26567323441
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10847-111F1;search_select_hide=table117:FF:10847-111F1
}}
}}

Latest revision as of 15:09, 3 June 2020

Name:mesothelioma cell line:NCI-H2052
Species:Human (Homo sapiens)
Library ID:CNhs13063
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuemesothelium
dev stageNA
sexmale
age65
cell typemesothelial cell
cell lineNCI-H2052
companyATCC
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005518
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13063 CAGE DRX007946 DRR008818
Accession ID Hg19

Library idBAMCTSS
CNhs13063 DRZ000243 DRZ001628
Accession ID Hg38

Library idBAMCTSS
CNhs13063 DRZ011593 DRZ012978
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.137
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.438
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.161
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0508
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.0707
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.165
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.16
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.449
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.00706
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.549
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.185
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0707
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.365
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.0752
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13063

Jaspar motifP-value
MA0002.20.031
MA0003.10.226
MA0004.10.786
MA0006.10.403
MA0007.10.647
MA0009.10.783
MA0014.10.582
MA0017.10.0905
MA0018.20.0012
MA0019.10.447
MA0024.12.83484e-4
MA0025.10.233
MA0027.10.355
MA0028.10.545
MA0029.10.25
MA0030.10.133
MA0031.10.027
MA0035.20.47
MA0038.10.663
MA0039.20.0913
MA0040.10.894
MA0041.10.676
MA0042.10.693
MA0043.10.0019
MA0046.10.133
MA0047.20.0631
MA0048.10.0325
MA0050.10.102
MA0051.10.542
MA0052.10.00978
MA0055.10.0245
MA0057.10.308
MA0058.10.963
MA0059.10.455
MA0060.10.00215
MA0061.10.00361
MA0062.20.86
MA0065.20.0333
MA0066.10.271
MA0067.10.00626
MA0068.10.069
MA0069.10.742
MA0070.10.235
MA0071.10.242
MA0072.10.0203
MA0073.10.934
MA0074.10.927
MA0076.10.833
MA0077.10.605
MA0078.10.14
MA0079.20.89
MA0080.28.76078e-8
MA0081.10.0985
MA0083.10.79
MA0084.10.777
MA0087.10.342
MA0088.10.666
MA0090.10.0014
MA0091.10.0332
MA0092.10.631
MA0093.10.643
MA0099.23.23308e-4
MA0100.10.77
MA0101.10.0596
MA0102.20.407
MA0103.10.138
MA0104.20.572
MA0105.18.25568e-5
MA0106.18.68615e-4
MA0107.10.00959
MA0108.20.692
MA0111.10.298
MA0112.20.0152
MA0113.10.0276
MA0114.10.106
MA0115.10.183
MA0116.10.00163
MA0117.10.585
MA0119.10.553
MA0122.10.463
MA0124.10.0867
MA0125.10.211
MA0131.10.581
MA0135.10.617
MA0136.14.77326e-6
MA0137.20.186
MA0138.22.61872e-4
MA0139.10.119
MA0140.10.416
MA0141.10.349
MA0142.10.459
MA0143.10.786
MA0144.10.129
MA0145.10.108
MA0146.10.961
MA0147.10.565
MA0148.10.0571
MA0149.10.12
MA0150.10.721
MA0152.10.841
MA0153.10.221
MA0154.17.93483e-4
MA0155.10.464
MA0156.10.0174
MA0157.10.0721
MA0159.10.596
MA0160.10.191
MA0162.10.975
MA0163.19.77497e-5
MA0164.10.262
MA0258.10.00252
MA0259.10.583



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13063

Novel motifP-value
10.163
100.105
1000.793
1010.175
1020.784
1030.785
1040.396
1050.0422
1060.287
1070.74
1080.999
1090.664
110.222
1100.401
1110.555
1120.0326
1139.84752e-4
1140.162
1150.676
1160.989
1170.012
1180.98
1190.165
120.214
1200.833
1210.496
1220.684
1230.00614
1240.424
1250.516
1260.333
1270.208
1280.121
1290.677
130.533
1300.585
1310.692
1320.278
1330.68
1340.679
1350.313
1360.32
1370.852
1380.92
1392.61306e-4
140.138
1400.831
1410.152
1420.0317
1430.74
1440.857
1450.145
1460.32
1470.475
1480.503
1490.405
150.249
1500.387
1510.544
1520.74
1530.364
1540.76
1550.00755
1560.605
1570.893
1580.0778
1590.424
160.782
1600.423
1610.311
1620.39
1630.0515
1640.897
1650.44
1660.625
1670.25
1680.396
1690.224
170.947
180.694
190.149
20.602
200.866
210.393
220.589
230.214
240.493
250.321
260.29
270.732
280.833
290.722
30.0999
300.724
310.634
320.0153
330.757
340.54
350.0243
360.258
370.323
380.245
390.932
40.232
400.871
410.349
420.23
430.0352
440.894
450.38
460.357
470.308
480.624
490.0313
50.018
500.899
510.604
520.705
530.486
540.612
550.529
560.599
570.991
580.0784
590.12
60.52
600.0417
610.644
620.0477
630.318
640.487
650.243
660.0952
670.713
680.714
690.179
70.0937
700.0214
710.364
720.19
730.999
740.977
750.156
760.999
770.617
780.467
790.62
80.972
800.043
810.721
820.0118
830.93
840.194
850.00505
860.0675
870.234
880.189
890.167
90.377
900.249
910.137
920.0478
930.453
940.385
950.827
960.196
970.548
980.308
990.0703



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13063


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0000213 (lining cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0000077 (mesothelial cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
1115 (sarcoma)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100453 (fibroblast cell line sample)
0100400 (sarcoma cell line sample)
0100460 (fibrosarcoma cell line sample)
0102424 (mesothelioma cell line sample)
0103764 (NCI cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000222 (mesodermal cell)

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