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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005438
|accession_numbers=CAGE;DRX007940;DRR008812;DRZ000237;DRZ001622;DRZ011587;DRZ012972
|ancestors_in_anatomy_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000144,CL:0000548,CL:0000012,CL:0002321,CL:0000063,CL:0000066,CL:0000076,CL:0000213,CL:0000215,CL:0000220,CL:0000004,CL:0000255,CL:0000222,CL:0000077
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000076,CL:0000213,CL:0000215,CL:0000255,CL:0000077
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0102424
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|datafreeze_phase=1
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr20:30433396..30433414,-!p1@FOXS1!2.01!102.02!FOXS1;;chr6:10415276..10415341,-!p2@TFAP2A!1.71!60.76!TFAP2A;;chr6:10412600..10412637,-!p1@TFAP2A!1.59!61.44!TFAP2A;;chr3:12330560..12330579,+!p1@PPARG!1.37!25.84!PPARG;;chr6:1389789..1389821,+!p1@FOXF2!1.30!25.84!FOXF2;;chr15:83953397..83953425,-!p1@BNC1!1.30!21.76!BNC1;;chr6:10412392..10412409,-!p4@TFAP2A!1.29!21.31!TFAP2A;;chr21:38071430..38071456,+!p1@SIM2!1.29!18.59!SIM2;;chr12:54332608..54332636,+!p1@HOXC13!1.19!14.51!HOXC13;;chr17:46682321..46682362,-!p1@HOXB6!1.16!13.38!HOXB6;;chr2:172949484..172949522,+!p1@DLX1!1.15!13.15!DLX1;;chr11:61520075..61520136,+!p1@C11orf9!1.11!25.16!C11orf9;;chr18:19749541..19749557,+!p1@GATA6!1.10!36.50!GATA6;;chr10:8096772..8096787,+!p2@GATA3!1.10!13.60!GATA3;;chr5:50679228..50679288,+!p1@ISL1!1.08!11.11!ISL1;;chr7:35293685..35293718,-!p1@TBX20!1.08!11.11!TBX20;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.07!10.66!HOXC5;;chr8:72756667..72756736,-!p2@MSC!1.06!16.55!MSC;;chr8:72756063..72756125,-!p1@MSC!1.05!21.08!MSC;;chr5:134369905..134369972,-!p1@PITX1!1.04!15.42!PITX1;;chr12:80084167..80084197,-!p5@PAWR!1.03!23.35!PAWR;;chr8:60031619..60031676,-!p1@TOX!1.03!21.31!TOX;;chr11:46299199..46299233,+!p1@CREB3L1!1.02!49.88!CREB3L1;;chr19:45908292..45908374,-!p1@PPP1R13L!1.01!83.20!PPP1R13L;;chr2:172967621..172967637,-!p1@DLX2!1.01!24.94!DLX2;;chr12:26277817..26277863,-!p2@BHLHE41!0.99!12.02!BHLHE41;;chr3:169381420..169381535,-!p1@MECOM!0.99!10.43!MECOM;;chr7:19157248..19157268,-!p1@TWIST1!0.98!24.48!TWIST1;;chr20:42295745..42295765,+!p1@MYBL2!0.97!141.24!MYBL2;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.97!86.37!GLIS2;;chr12:26277956..26277980,-!p1@BHLHE41!0.97!30.83!BHLHE41;;chr20:50721803..50721857,-!p2@ZFP64!0.97!13.38!ZFP64;;chr5:172662197..172662216,-!p1@NKX2-5!0.97!8.39!NKX2-5;;chr12:124873357..124873401,-!p1@NCOR2!0.96!96.35!NCOR2;;chr12:80084737..80084763,-!p3@PAWR!0.96!31.06!PAWR;;chr12:54393880..54393962,+!p1@HOXC9!0.96!8.16!HOXC9;;chr3:138665937..138665968,-!p1@FOXL2!0.93!7.48!FOXL2;;chr7:19157043..19157088,-!p2@TWIST1!0.92!19.04!TWIST1;;chr12:80085061..80085119,-!p6@PAWR!0.92!11.79!PAWR;;chrY:21906594..21906622,-!p1@KDM5D!0.92!7.25!KDM5D;;chr6:1312325..1312340,+!p1@FOXQ1!0.91!11.79!FOXQ1;;chr12:26277929..26277955,-!p3@BHLHE41!0.91!10.20!BHLHE41;;chr8:72756637..72756664,-!p3@MSC!0.91!8.16!MSC;;chr20:42295713..42295738,+!p2@MYBL2!0.90!42.85!MYBL2;;chr17:46687959..46688007,-!p2@HOXB7!0.90!9.75!HOXB7;;chr15:67418119..67418162,+!p5@SMAD3!0.90!7.71!SMAD3;;chr3:25470156..25470227,+!p2@RARB!0.90!7.03!RARB;;chr6:10412576..10412599,-!p5@TFAP2A!0.89!6.80!TFAP2A;;chr12:80084137..80084165,-!p10@PAWR!0.88!8.61!PAWR;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.88!6.57!SEBOX;;chr7:27153454..27153469,-!p2@HOXA3!0.88!6.57!HOXA3;;chr8:72756267..72756296,-!p4@MSC!0.87!9.75!MSC;;chr10:8096631..8096660,+!p1@GATA3!0.87!7.93!GATA3;;chr3:170076314..170076334,+!p2@SKIL!0.85!8.16!SKIL;;chr16:86544113..86544145,+!p1@FOXF1!0.84!7.48!FOXF1;;chr11:65667846..65667868,-!p1@FOSL1!0.83!163.91!FOSL1;;chr11:44331576..44331650,-!p1@ALX4!0.82!5.67!ALX4;;chr12:54394309..54394336,+!p2@HOXC9!0.82!5.67!HOXC9;;chr12:57853634..57853662,+!p2@GLI1!0.82!5.67!GLI1;;chr16:85932760..85932775,+!p1@IRF8!0.81!5.44!IRF8;;chr8:72756213..72756243,-!p5@MSC!0.79!6.80!MSC;;chr12:54402745..54402788,+!p1@HOXC8!0.79!5.21!HOXC8;;chr2:172967242..172967265,-!p2@DLX2!0.79!5.21!DLX2;;chr18:19749386..19749404,+!p2@GATA6!0.78!7.48!GATA6;;chr16:1429010..1429038,-!p5@UNKL!0.78!4.99!UNKL;;chr12:124873852..124873881,-!p3@NCOR2!0.77!32.42!NCOR2;;chr7:27835758..27835772,+!p3@TAX1BP1!0.77!6.80!TAX1BP1;;chr12:80084303..80084332,-!p1@PAWR!0.76!30.61!PAWR;;chr11:65667884..65667895,-!p2@FOSL1!0.76!20.18!FOSL1;;chr5:92918894..92918912,+!p2@NR2F1!0.76!16.78!NR2F1;;chr7:1577899..1577943,+!p3@MAFK!0.76!4.76!MAFK;;chr12:54332652..54332671,+!p2@HOXC13!0.76!4.76!HOXC13;;chr5:92918919..92918942,+!p1@NR2F1!0.75!22.44!NR2F1;;chr3:168864315..168864339,-!p2@MECOM!0.75!7.93!MECOM;;chr16:29818199..29818216,+!p11@MAZ!0.75!7.93!MAZ;;chr1:23885981..23886002,-!p1@ID3!0.74!884.83!ID3;;chr12:80084279..80084293,-!p8@PAWR!0.74!7.93!PAWR;;chr12:54332687..54332701,+!p3@HOXC13!0.74!4.53!HOXC13;;chr15:83953373..83953386,-!p2@BNC1!0.74!4.53!BNC1;;chr8:11561684..11561751,+!p1@GATA4!0.74!4.53!GATA4;;chr21:38071403..38071428,+!p2@SIM2!0.74!4.53!SIM2;;chr7:77428149..77428220,+!p1@PHTF2!0.73!49.20!PHTF2;;chr15:67418047..67418093,+!p4@SMAD3!0.73!5.67!SMAD3;;chr7:26191809..26191890,+!p1@NFE2L3!0.72!23.35!NFE2L3;;chr12:80083544..80083558,-!p13@PAWR!0.72!5.44!PAWR;;chr5:172662230..172662241,-!p3@NKX2-5!0.72!4.31!NKX2-5;;chr5:2751762..2751784,-!p1@IRX2!0.72!4.31!IRX2;;chr6:10415484..10415508,-!p3@TFAP2A!0.72!4.31!TFAP2A;;chr6:1389989..1390019,+!p2@FOXF2!0.72!4.31!FOXF2;;chr2:113994526..113994556,-!p3@PAX8!0.72!4.31!PAX8;;chr2:239756739..239756755,+!p2@TWIST2!0.71!7.48!TWIST2;;chr7:27788205..27788255,+!p2@TAX1BP1!0.71!6.80!TAX1BP1;;chr6:10412477..10412490,-!p10@TFAP2A!0.71!4.08!TFAP2A;;chr13:73633131..73633149,+!p1@KLF5!0.70!48.29!KLF5;;chr8:60031682..60031710,-!p2@TOX!0.69!6.80!TOX;;chr12:54447599..54447630,+!p3@HOXC4!0.69!4.99!HOXC4;;chr18:53068911..53068935,-!p4@TCF4!0.69!4.53!TCF4;;chr5:3595977..3595999,+!p1@IRX1!0.69!3.85!IRX1;;chr20:30193083..30193098,+!p1@ID1!0.68!356.38!ID1;;chr6:19837592..19837621,+!p1@ID4!0.68!26.30!ID4;;chr17:46622114..46622138,-!p4@HOXB2!0.68!6.12!HOXB2;;chr8:72756023..72756055,-!p6@MSC!0.67!4.76!MSC;;chr6:1389824..1389840,+!p3@FOXF2!0.67!3.63!FOXF2;;chr15:80843484..80843499,+!p5@ARNT2!0.67!3.63!ARNT2;;chr12:80084120..80084136,-!p15@PAWR!0.67!3.63!PAWR;;chrY:2803415..2803468,+!p1@ZFY!0.67!3.63!ZFY;;chr16:29818160..29818188,+!p6@MAZ!0.66!19.04!MAZ;;chr8:67525443..67525459,-!p2@MYBL1!0.66!5.67!MYBL1;;chr10:48355030..48355090,+!p1@ZNF488!0.66!4.76!ZNF488;;chr20:32274179..32274213,-!p1@E2F1!0.65!26.75!E2F1;;chr2:239756671..239756732,+!p1@TWIST2!0.65!12.70!TWIST2;;chr1:45805872..45805900,+!p2@TOE1!0.65!9.29!TOE1;;chr17:46622070..46622109,-!p1@HOXB2!0.65!8.61!HOXB2;;chr12:26278008..26278024,-!p4@BHLHE41!0.65!4.31!BHLHE41;;chr12:3068544..3068597,+!p1@TEAD4!0.64!23.80!TEAD4;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.64!3.40!HOXC5;;chr5:3595934..3595957,+!p2@IRX1!0.64!3.40!IRX1;;chr4:299227..299272,-!p1@ZNF732!0.64!3.40!ZNF732;;chr12:2986275..2986363,-!p1@FOXM1!0.63!38.54!FOXM1;;chr6:126240380..126240430,+!p2@NCOA7!0.63!9.52!NCOA7;;chr12:57853565..57853579,+!p1@GLI1!0.62!3.40!GLI1;;chr1:197886461..197886558,+!p1@LHX9!0.62!3.17!LHX9;;chr7:101917407..101917443,+!p3@CUX1!0.62!3.17!CUX1;;chr8:72756380..72756427,-!p8@MSC!0.62!3.17!MSC;;chr12:3069037..3069119,+!p2@TEAD4!0.61!12.24!TEAD4;;chr1:200379104..200379128,-!p2@ZNF281!0.61!8.61!ZNF281;;chr3:25469724..25469773,+!p1@RARB!0.61!4.76!RARB;;chr17:46688334..46688385,-!p1@HOXB7!0.61!4.76!HOXB7;;chr7:27779729..27779819,+!p1@TAX1BP1!0.60!229.20!TAX1BP1;;chr17:41277372..41277418,-!p1@BRCA1!0.60!12.70!BRCA1;;chr15:37392094..37392116,-!p6@MEIS2!0.60!3.85!MEIS2;;chr6:1612300..1612324,+!p3@FOXC1!0.60!2.95!FOXC1;;chr2:176994408..176994492,+!p1@HOXD8!0.60!2.95!HOXD8;;chr12:54447637..54447659,+!p4@HOXC4!0.60!2.95!HOXC4;;chr14:37131058..37131139,+!p1@PAX9!0.60!2.95!PAX9;;chr2:121493425..121493474,+!p1@GLI2!0.59!7.25!GLI2;;chr8:23540441..23540466,-!p1@NKX3-1!0.59!6.57!NKX3-1;;chr16:4366021..4366045,+!p@chr16:4366021..4366045,+!0.58!16.10!GLIS2;;chr11:46299539..46299620,+!p2@CREB3L1!0.58!5.21!CREB3L1;;chr3:168865194..168865245,-!p3@MECOM!0.58!3.85!MECOM;;chr12:80084768..80084821,-!p2@PAWR!0.57!23.12!PAWR;;chr1:35656508..35656584,-!p2@SFPQ!0.57!10.20!SFPQ;;chr1:35657108..35657135,-!p5@SFPQ!0.57!5.89!SFPQ;;chr12:80085255..80085284,-!p9@PAWR!0.57!4.31!PAWR;;chr15:80696703..80696754,+!p1@ARNT2!0.57!3.85!ARNT2;;chr15:67418177..67418204,+!p9@SMAD3!0.57!2.72!SMAD3;;chr1:201979703..201979721,+!p2@ELF3!0.57!2.72!ELF3;;chr5:139492456..139492489,+!p7@PURA!0.57!2.72!PURA;;chr11:16627528..16627550,-!p7@SOX6!0.57!2.72!SOX6;;chr3:69915385..69915438,+!p3@MITF!0.57!2.72!MITF;;chr6:21593973..21593988,+!p1@SOX4!0.56!118.57!SOX4;;chr16:1429627..1429662,-!p2@UNKL!0.56!9.07!UNKL;;chr19:20188776..20188826,+!p1@ZNF90!0.56!8.39!ZNF90;;chrX:66763856..66763896,+!p1@AR!0.56!4.08!AR;;chr6:85473156..85473210,-!p2@TBX18!0.56!3.40!TBX18;;chr19:6110474..6110551,-!p1@RFX2!0.55!19.27!RFX2;;chr12:77459306..77459365,-!p1@E2F7!0.54!39.45!E2F7;;chr12:27485785..27485816,+!p1@ARNTL2!0.54!21.31!ARNTL2;;chr8:77593474..77593612,+!p1@ZFHX4!0.54!12.70!ZFHX4;;chr6:20402102..20402152,+!p1@E2F3!0.54!12.47!E2F3;;chr18:19749517..19749531,+!p3@GATA6!0.54!4.99!GATA6;;chr1:221052776..221052799,+!p1@HLX!0.54!4.99!HLX;;chr11:120107344..120107351,+!p1@POU2F3!0.54!3.17!POU2F3;;chr12:54394059..54394088,+!p3@HOXC9!0.54!2.49!HOXC9;;chr7:27142290..27142310,-!p1@HOXA2!0.54!2.49!HOXA2;;chr8:60031934..60031986,-!p6@TOX!0.54!2.49!TOX;;chr2:172950227..172950249,+!p2@DLX1!0.54!2.49!DLX1;;chr6:31126291..31126399,+!p1@TCF19!0.53!29.02!TCF19;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.53!13.60!TAL1;;chr3:12329397..12329433,+!p2@PPARG!0.53!6.35!PPARG;;chr9:99180617..99180658,-!p1@ZNF367!0.53!6.12!ZNF367;;chr2:200323414..200323455,-!p1@SATB2!0.53!5.89!SATB2;;chr11:8102846..8102892,+!p1@TUB!0.53!3.63!TUB;;chr10:8095593..8095625,+!p3@GATA3!0.53!2.95!GATA3;;chr3:114343768..114343822,-!p1@ZBTB20!0.52!12.70!ZBTB20;;chr7:27135591..27135658,-!p1@HOXA1!0.52!5.21!HOXA1;;chr6:45390077..45390105,+!p9@RUNX2!0.52!3.17!RUNX2;;chr1:164528410..164528428,+!p1@PBX1!0.51!21.54!PBX1;;chr21:27107465..27107557,+!p3@GABPA!0.51!10.20!GABPA;;chr12:53625966..53626012,-!p2@RARG!0.51!7.25!RARG;;chr5:158526917..158526932,-!p1@EBF1!0.51!6.80!EBF1;;chr11:12696002..12696022,+!p2@TEAD1!0.51!6.57!TEAD1;;chrX:66763815..66763854,+!p2@AR!0.51!3.17!AR;;chr3:157823517..157823562,-!p1@SHOX2!0.51!2.49!SHOX2;;chr2:172967323..172967336,-!p4@DLX2!0.51!2.27!DLX2;;chr3:138665969..138665993,-!p2@FOXL2!0.51!2.27!FOXL2;;chr4:103423079..103423112,+!p4@NFKB1!0.51!2.27!NFKB1;;chr1:201979743..201979762,+!p1@ELF3!0.51!2.27!ELF3;;chr11:1662926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AP2A;;chr13:73633131..73633149,+!p1@KLF5!0.70!48.29!KLF5;;chr8:60031682..60031710,-!p2@TOX!0.69!6.80!TOX;;chr12:54447599..54447630,+!p3@HOXC4!0.69!4.99!HOXC4;;chr18:53068911..53068935,-!p4@TCF4!0.69!4.53!TCF4;;chr5:3595977..3595999,+!p1@IRX1!0.69!3.85!IRX1;;chr20:30193083..30193098,+!p1@ID1!0.68!356.38!ID1;;chr6:19837592..19837621,+!p1@ID4!0.68!26.30!ID4;;chr17:46622114..46622138,-!p4@HOXB2!0.68!6.12!HOXB2;;chr8:72756023..72756055,-!p6@MSC!0.67!4.76!MSC;;chr6:1389824..1389840,+!p3@FOXF2!0.67!3.63!FOXF2;;chr15:80843484..80843499,+!p5@ARNT2!0.67!3.63!ARNT2;;chr12:80084120..80084136,-!p15@PAWR!0.67!3.63!PAWR;;chrY:2803415..2803468,+!p1@ZFY!0.67!3.63!ZFY;;chr16:29818160..29818188,+!p6@MAZ!0.66!19.04!MAZ;;chr8:67525443..67525459,-!p2@MYBL1!0.66!5.67!MYBL1;;chr10:48355030..48355090,+!p1@ZNF488!0.66!4.76!ZNF488;;chr20:32274179..32274213,-!p1@E2F1!0.65!26.75!E2F1;;chr2:239756671..239756732,+!p1@TWIST2!0.65!12.70!TWIST2;;chr1:45805872..45805900,+!p2@TOE1!0.65!9.29!TOE1;;chr17:46622070..46622109,-!p1@HOXB2!0.65!8.61!HOXB2;;chr12:26278008..26278024,-!p4@BHLHE41!0.65!4.31!BHLHE41;;chr12:3068544..3068597,+!p1@TEAD4!0.64!23.80!TEAD4;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.64!3.40!HOXC5;;chr5:3595934..3595957,+!p2@IRX1!0.64!3.40!IRX1;;chr4:299227..299272,-!p1@ZNF732!0.64!3.40!ZNF732;;chr12:2986275..2986363,-!p1@FOXM1!0.63!38.54!FOXM1;;chr6:126240380..126240430,+!p2@NCOA7!0.63!9.52!NCOA7;;chr12:57853565..57853579,+!p1@GLI1!0.62!3.40!GLI1;;chr1:197886461..197886558,+!p1@LHX9!0.62!3.17!LHX9;;chr7:101917407..101917443,+!p3@CUX1!0.62!3.17!CUX1;;chr8:72756380..72756427,-!p8@MSC!0.62!3.17!MSC;;chr12:3069037..3069119,+!p2@TEAD4!0.61!12.24!TEAD4;;chr1:200379104..200379128,-!p2@ZNF281!0.61!8.61!ZNF281;;chr3:25469724..25469773,+!p1@RARB!0.61!4.76!RARB;;chr17:46688334..46688385,-!p1@HOXB7!0.61!4.76!HOXB7;;chr7:27779729..27779819,+!p1@TAX1BP1!0.60!229.20!TAX1BP1;;chr17:41277372..41277418,-!p1@BRCA1!0.60!12.70!BRCA1;;chr15:37392094..37392116,-!p6@MEIS2!0.60!3.85!MEIS2;;chr6:1612300..1612324,+!p3@FOXC1!0.60!2.95!FOXC1;;chr2:176994408..176994492,+!p1@HOXD8!0.60!2.95!HOXD8;;chr12:54447637..54447659,+!p4@HOXC4!0.60!2.95!HOXC4;;chr14:37131058..37131139,+!p1@PAX9!0.60!2.95!PAX9;;chr2:121493425..121493474,+!p1@GLI2!0.59!7.25!GLI2;;chr8:23540441..23540466,-!p1@NKX3-1!0.59!6.57!NKX3-1;;chr16:4366021..4366045,+!p@chr16:4366021..4366045,+!0.58!16.10!GLIS2;;chr11:46299539..46299620,+!p2@CREB3L1!0.58!5.21!CREB3L1;;chr3:168865194..168865245,-!p3@MECOM!0.58!3.85!MECOM;;chr12:80084768..80084821,-!p2@PAWR!0.57!23.12!PAWR;;chr1:35656508..35656584,-!p2@SFPQ!0.57!10.20!SFPQ;;chr1:35657108..35657135,-!p5@SFPQ!0.57!5.89!SFPQ;;chr12:80085255..80085284,-!p9@PAWR!0.57!4.31!PAWR;;chr15:80696703..80696754,+!p1@ARNT2!0.57!3.85!ARNT2;;chr15:67418177..67418204,+!p9@SMAD3!0.57!2.72!SMAD3;;chr1:201979703..201979721,+!p2@ELF3!0.57!2.72!ELF3;;chr5:139492456..139492489,+!p7@PURA!0.57!2.72!PURA;;chr11:16627528..16627550,-!p7@SOX6!0.57!2.72!SOX6;;chr3:69915385..69915438,+!p3@MITF!0.57!2.72!MITF;;chr6:21593973..21593988,+!p1@SOX4!0.56!118.57!SOX4;;chr16:1429627..1429662,-!p2@UNKL!0.56!9.07!UNKL;;chr19:20188776..20188826,+!p1@ZNF90!0.56!8.39!ZNF90;;chrX:66763856..66763896,+!p1@AR!0.56!4.08!AR;;chr6:85473156..85473210,-!p2@TBX18!0.56!3.40!TBX18;;chr19:6110474..6110551,-!p1@RFX2!0.55!19.27!RFX2;;chr12:77459306..77459365,-!p1@E2F7!0.54!39.45!E2F7;;chr12:27485785..27485816,+!p1@ARNTL2!0.54!21.31!ARNTL2;;chr8:77593474..77593612,+!p1@ZFHX4!0.54!12.70!ZFHX4;;chr6:20402102..20402152,+!p1@E2F3!0.54!12.47!E2F3;;chr18:19749517..19749531,+!p3@GATA6!0.54!4.99!GATA6;;chr1:221052776..221052799,+!p1@HLX!0.54!4.99!HLX;;chr11:120107344..120107351,+!p1@POU2F3!0.54!3.17!POU2F3;;chr12:54394059..54394088,+!p3@HOXC9!0.54!2.49!HOXC9;;chr7:27142290..27142310,-!p1@HOXA2!0.54!2.49!HOXA2;;chr8:60031934..60031986,-!p6@TOX!0.54!2.49!TOX;;chr2:172950227..172950249,+!p2@DLX1!0.54!2.49!DLX1;;chr6:31126291..31126399,+!p1@TCF19!0.53!29.02!TCF19;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.53!13.60!TAL1;;chr3:12329397..12329433,+!p2@PPARG!0.53!6.35!PPARG;;chr9:99180617..99180658,-!p1@ZNF367!0.53!6.12!ZNF367;;chr2:200323414..200323455,-!p1@SATB2!0.53!5.89!SATB2;;chr11:8102846..8102892,+!p1@TUB!0.53!3.63!TUB;;chr10:8095593..8095625,+!p3@GATA3!0.53!2.95!GATA3;;chr3:114343768..114343822,-!p1@ZBTB20!0.52!12.70!ZBTB20;;chr7:27135591..27135658,-!p1@HOXA1!0.52!5.21!HOXA1;;chr6:45390077..45390105,+!p9@RUNX2!0.52!3.17!RUNX2;;chr1:164528410..164528428,+!p1@PBX1!0.51!21.54!PBX1;;chr21:27107465..27107557,+!p3@GABPA!0.51!10.20!GABPA;;chr12:53625966..53626012,-!p2@RARG!0.51!7.25!RARG;;chr5:158526917..158526932,-!p1@EBF1!0.51!6.80!EBF1;;chr11:12696002..12696022,+!p2@TEAD1!0.51!6.57!TEAD1;;chrX:66763815..66763854,+!p2@AR!0.51!3.17!AR;;chr3:157823517..157823562,-!p1@SHOX2!0.51!2.49!SHOX2;;chr2:172967323..172967336,-!p4@DLX2!0.51!2.27!DLX2;;chr3:138665969..138665993,-!p2@FOXL2!0.51!2.27!FOXL2;;chr4:103423079..103423112,+!p4@NFKB1!0.51!2.27!NFKB1;;chr1:201979743..201979762,+!p1@ELF3!0.51!2.27!ELF3;;chr11:1662926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|ffid_belonging_in_development=CL:0000222
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Line 36: Line 41:
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Line 44: Line 60:
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Line 59: Line 78:
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|sample_cell_line=Mero-41
Line 80: Line 100:
|top_motifs=NR3C1:1.92360010564;AIRE:1.27048358446;ADNP_IRX_SIX_ZHX:1.25150724299;POU1F1:1.2175170462;HSF1,2:1.16262435032;E2F1..5:0.94021099716;UFEwm:0.939558351937;NKX3-2:0.925221294027;ZBTB16:0.879644447359;NKX3-1:0.85957597076;TEAD1:0.857223404674;PAX8:0.811767777907;TEF:0.795581584595;EVI1:0.777160841576;ONECUT1,2:0.74928807743;FOXA2:0.697723783923;ZNF384:0.688845949687;MYB:0.682921717174;NFE2L2:0.682507100736;T:0.660692861157;TAL1_TCF{3,4,12}:0.660595387752;HAND1,2:0.658953315255;NFE2L1:0.647960540507;TLX1..3_NFIC{dimer}:0.640746896512;TFDP1:0.631854812911;PAX6:0.563736337955;HMGA1,2:0.53761801865;NKX2-2,8:0.528326971964;HMX1:0.527895289579;ALX4:0.46091904169;TBX4,5:0.455182834768;RFX1:0.4362750417;STAT5{A,B}:0.436190140734;ELK1,4_GABP{A,B1}:0.413435646088;HOX{A4,D4}:0.405268095245;HES1:0.391452803851;KLF4:0.383393538635;OCT4_SOX2{dimer}:0.380148778983;NFE2:0.379226170533;ALX1:0.369804715882;HOX{A5,B5}:0.360546142934;NR6A1:0.352737318281;ZNF143:0.348573733082;HOXA9_MEIS1:0.338756673146;bHLH_family:0.325452055593;FOXL1:0.317315865557;GLI1..3:0.281562038588;SOX17:0.266221154407;PRDM1:0.265387395616;NFATC1..3:0.245714868776;MYBL2:0.240429139944;TP53:0.214914932022;GFI1:0.207482002724;LEF1_TCF7_TCF7L1,2:0.206684972483;TOPORS:0.200380335223;NFY{A,B,C}:0.195876330409;FOXP3:0.140964244873;CDX1,2,4:0.140817412942;IKZF2:0.123652059798;EN1,2:0.11805198992;TFAP2B:0.107890712263;TFCP2:0.103667219579;BACH2:0.0994385789578;NKX6-1,2:0.0981448948028;GFI1B:0.0951491988838;FOXD3:0.0823843161024;GTF2A1,2:0.0820244577305;IKZF1:0.0789986532975;SRF:0.0757850656961;XBP1:0.0683513576957;CDC5L:0.0656006852566;XCPE1{core}:0.0626623088053;PAX4:0.0585210597075;RXRA_VDR{dimer}:0.0570010373688;RXR{A,B,G}:0.0480062521634;POU3F1..4:0.0352424891889;FOXM1:0.0285047742558;MYOD1:0.02628808648;PAX5:0.0202317093904;HNF4A_NR2F1,2:0.0166080367621;TBP:0.0109887596493;POU5F1:0.00644637116054;HLF:0.00482261753241;CUX2:-0.00589328468835;AHR_ARNT_ARNT2:-0.00854440429854;LHX3,4:-0.0127623208412;MAFB:-0.0139477770349;SNAI1..3:-0.0202309344143;MTE{core}:-0.020290445477;IRF1,2:-0.020319115544;FOX{I1,J2}:-0.0279268424896;GATA4:-0.0363391021622;FOS_FOS{B,L1}_JUN{B,D}:-0.0371236548633;HNF1A:-0.0415049541758;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0420677406337;HIC1:-0.070402098774;NRF1:-0.0788175184082;STAT1,3:-0.0818316669755;EBF1:-0.082232390983;MZF1:-0.0876895728909;MAZ:-0.0912652844342;CRX:-0.0976354100951;GTF2I:-0.126021352451;YY1:-0.126868078865;ZNF238:-0.128023359466;ZBTB6:-0.134546282284;IRF7:-0.135888786293;NR5A1,2:-0.136816163459;SOX{8,9,10}:-0.145858627517;ZIC1..3:-0.152414264275;GCM1,2:-0.166339159521;VSX1,2:-0.171767700081;PRRX1,2:-0.172970932271;SOX2:-0.192591413717;PDX1:-0.201823280541;NFKB1_REL_RELA:-0.20445073557;FOSL2:-0.218004366694;LMO2:-0.226181228548;GZF1:-0.235482173161;ZEB1:-0.244725436998;SMAD1..7,9:-0.245887233416;BREu{core}:-0.249042731079;POU6F1:-0.250883763639;ARID5B:-0.257960879171;ZNF148:-0.315509505765;NFIX:-0.319978899723;EGR1..3:-0.322448155731;PITX1..3:-0.328430929479;ESR1:-0.343198578638;HBP1_HMGB_SSRP1_UBTF:-0.352930964957;RREB1:-0.386740162847;POU2F1..3:-0.39046076841;CEBPA,B_DDIT3:-0.391741424064;SP1:-0.395570845607;STAT2,4,6:-0.398713147527;ELF1,2,4:-0.401618301303;GATA6:-0.402780961661;RFX2..5_RFXANK_RFXAP:-0.403599116582;FOXQ1:-0.405351700434;NKX2-1,4:-0.428641219574;FOXP1:-0.442259287055;NR1H4:-0.481793458739;EP300:-0.483032402818;AR:-0.486061000866;MED-1{core}:-0.496649964787;ZFP161:-0.498208738802;PAX1,9:-0.501165291627;MEF2{A,B,C,D}:-0.505288613315;NKX2-3_NKX2-5:-0.509375926605;ETS1,2:-0.522710247288;TFAP2{A,C}:-0.531714951579;DMAP1_NCOR{1,2}_SMARC:-0.532489918435;PPARG:-0.539403566903;ATF6:-0.552160844191;SPIB:-0.55311158833;PBX1:-0.554824312688;REST:-0.559269195905;ATF5_CREB3:-0.567920958922;PAX2:-0.57774313453;MYFfamily:-0.599166106588;RUNX1..3:-0.610818470678;NFIL3:-0.610882549587;RBPJ:-0.611703920361;SPI1:-0.616606868005;PATZ1:-0.616813072123;PAX3,7:-0.628096568834;DBP:-0.68579671677;HOX{A6,A7,B6,B7}:-0.694500610878;SPZ1:-0.701258457312;FOX{F1,F2,J1}:-0.709105389443;HIF1A:-0.748789409196;MTF1:-0.757116483597;BPTF:-0.761732694948;FOXO1,3,4:-0.765246068991;ATF4:-0.781380243679;TFAP4:-0.789595817828;NANOG:-0.814352534556;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.820717354454;NHLH1,2:-0.872374084186;ZNF423:-0.880934837901;FOX{D1,D2}:-0.886275393442;CREB1:-0.957167747857;ESRRA:-0.970136239172;FOXN1:-0.992470091929;SREBF1,2:-1.04734984104;TGIF1:-1.04783779905;ATF2:-1.11168401191;SOX5:-1.12765020878;TLX2:-1.15211937805;NANOG{mouse}:-1.16931888298;RORA:-1.33867689439;JUN:-1.4201909485
|top_motifs=NR3C1:1.92360010564;AIRE:1.27048358446;ADNP_IRX_SIX_ZHX:1.25150724299;POU1F1:1.2175170462;HSF1,2:1.16262435032;E2F1..5:0.94021099716;UFEwm:0.939558351937;NKX3-2:0.925221294027;ZBTB16:0.879644447359;NKX3-1:0.85957597076;TEAD1:0.857223404674;PAX8:0.811767777907;TEF:0.795581584595;EVI1:0.777160841576;ONECUT1,2:0.74928807743;FOXA2:0.697723783923;ZNF384:0.688845949687;MYB:0.682921717174;NFE2L2:0.682507100736;T:0.660692861157;TAL1_TCF{3,4,12}:0.660595387752;HAND1,2:0.658953315255;NFE2L1:0.647960540507;TLX1..3_NFIC{dimer}:0.640746896512;TFDP1:0.631854812911;PAX6:0.563736337955;HMGA1,2:0.53761801865;NKX2-2,8:0.528326971964;HMX1:0.527895289579;ALX4:0.46091904169;TBX4,5:0.455182834768;RFX1:0.4362750417;STAT5{A,B}:0.436190140734;ELK1,4_GABP{A,B1}:0.413435646088;HOX{A4,D4}:0.405268095245;HES1:0.391452803851;KLF4:0.383393538635;OCT4_SOX2{dimer}:0.380148778983;NFE2:0.379226170533;ALX1:0.369804715882;HOX{A5,B5}:0.360546142934;NR6A1:0.352737318281;ZNF143:0.348573733082;HOXA9_MEIS1:0.338756673146;bHLH_family:0.325452055593;FOXL1:0.317315865557;GLI1..3:0.281562038588;SOX17:0.266221154407;PRDM1:0.265387395616;NFATC1..3:0.245714868776;MYBL2:0.240429139944;TP53:0.214914932022;GFI1:0.207482002724;LEF1_TCF7_TCF7L1,2:0.206684972483;TOPORS:0.200380335223;NFY{A,B,C}:0.195876330409;FOXP3:0.140964244873;CDX1,2,4:0.140817412942;IKZF2:0.123652059798;EN1,2:0.11805198992;TFAP2B:0.107890712263;TFCP2:0.103667219579;BACH2:0.0994385789578;NKX6-1,2:0.0981448948028;GFI1B:0.0951491988838;FOXD3:0.0823843161024;GTF2A1,2:0.0820244577305;IKZF1:0.0789986532975;SRF:0.0757850656961;XBP1:0.0683513576957;CDC5L:0.0656006852566;XCPE1{core}:0.0626623088053;PAX4:0.0585210597075;RXRA_VDR{dimer}:0.0570010373688;RXR{A,B,G}:0.0480062521634;POU3F1..4:0.0352424891889;FOXM1:0.0285047742558;MYOD1:0.02628808648;PAX5:0.0202317093904;HNF4A_NR2F1,2:0.0166080367621;TBP:0.0109887596493;POU5F1:0.00644637116054;HLF:0.00482261753241;CUX2:-0.00589328468835;AHR_ARNT_ARNT2:-0.00854440429854;LHX3,4:-0.0127623208412;MAFB:-0.0139477770349;SNAI1..3:-0.0202309344143;MTE{core}:-0.020290445477;IRF1,2:-0.020319115544;FOX{I1,J2}:-0.0279268424896;GATA4:-0.0363391021622;FOS_FOS{B,L1}_JUN{B,D}:-0.0371236548633;HNF1A:-0.0415049541758;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.0420677406337;HIC1:-0.070402098774;NRF1:-0.0788175184082;STAT1,3:-0.0818316669755;EBF1:-0.082232390983;MZF1:-0.0876895728909;MAZ:-0.0912652844342;CRX:-0.0976354100951;GTF2I:-0.126021352451;YY1:-0.126868078865;ZNF238:-0.128023359466;ZBTB6:-0.134546282284;IRF7:-0.135888786293;NR5A1,2:-0.136816163459;SOX{8,9,10}:-0.145858627517;ZIC1..3:-0.152414264275;GCM1,2:-0.166339159521;VSX1,2:-0.171767700081;PRRX1,2:-0.172970932271;SOX2:-0.192591413717;PDX1:-0.201823280541;NFKB1_REL_RELA:-0.20445073557;FOSL2:-0.218004366694;LMO2:-0.226181228548;GZF1:-0.235482173161;ZEB1:-0.244725436998;SMAD1..7,9:-0.245887233416;BREu{core}:-0.249042731079;POU6F1:-0.250883763639;ARID5B:-0.257960879171;ZNF148:-0.315509505765;NFIX:-0.319978899723;EGR1..3:-0.322448155731;PITX1..3:-0.328430929479;ESR1:-0.343198578638;HBP1_HMGB_SSRP1_UBTF:-0.352930964957;RREB1:-0.386740162847;POU2F1..3:-0.39046076841;CEBPA,B_DDIT3:-0.391741424064;SP1:-0.395570845607;STAT2,4,6:-0.398713147527;ELF1,2,4:-0.401618301303;GATA6:-0.402780961661;RFX2..5_RFXANK_RFXAP:-0.403599116582;FOXQ1:-0.405351700434;NKX2-1,4:-0.428641219574;FOXP1:-0.442259287055;NR1H4:-0.481793458739;EP300:-0.483032402818;AR:-0.486061000866;MED-1{core}:-0.496649964787;ZFP161:-0.498208738802;PAX1,9:-0.501165291627;MEF2{A,B,C,D}:-0.505288613315;NKX2-3_NKX2-5:-0.509375926605;ETS1,2:-0.522710247288;TFAP2{A,C}:-0.531714951579;DMAP1_NCOR{1,2}_SMARC:-0.532489918435;PPARG:-0.539403566903;ATF6:-0.552160844191;SPIB:-0.55311158833;PBX1:-0.554824312688;REST:-0.559269195905;ATF5_CREB3:-0.567920958922;PAX2:-0.57774313453;MYFfamily:-0.599166106588;RUNX1..3:-0.610818470678;NFIL3:-0.610882549587;RBPJ:-0.611703920361;SPI1:-0.616606868005;PATZ1:-0.616813072123;PAX3,7:-0.628096568834;DBP:-0.68579671677;HOX{A6,A7,B6,B7}:-0.694500610878;SPZ1:-0.701258457312;FOX{F1,F2,J1}:-0.709105389443;HIF1A:-0.748789409196;MTF1:-0.757116483597;BPTF:-0.761732694948;FOXO1,3,4:-0.765246068991;ATF4:-0.781380243679;TFAP4:-0.789595817828;NANOG:-0.814352534556;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.820717354454;NHLH1,2:-0.872374084186;ZNF423:-0.880934837901;FOX{D1,D2}:-0.886275393442;CREB1:-0.957167747857;ESRRA:-0.970136239172;FOXN1:-0.992470091929;SREBF1,2:-1.04734984104;TGIF1:-1.04783779905;ATF2:-1.11168401191;SOX5:-1.12765020878;TLX2:-1.15211937805;NANOG{mouse}:-1.16931888298;RORA:-1.33867689439;JUN:-1.4201909485
|xref=
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10851-111F5;search_select_hide=table117:FF:10851-111F5
}}
}}

Latest revision as of 15:09, 3 June 2020

Name:mesothelioma cell line:Mero-41
Species:Human (Homo sapiens)
Library ID:CNhs13067
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuemesothelium
dev stageNA
sexmale
age60
cell typemesothelial cell
cell lineMero-41
companyECACC
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005438
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13067 CAGE DRX007940 DRR008812
Accession ID Hg19

Library idBAMCTSS
CNhs13067 DRZ000237 DRZ001622
Accession ID Hg38

Library idBAMCTSS
CNhs13067 DRZ011587 DRZ012972
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0301
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.413
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.571
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0355
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.135
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.069
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.0887
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0507
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0584
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.162
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.34
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-0.012
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0157
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.529
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.225
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.0887
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.0887
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.0887
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.596
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.28
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.12
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13067

Jaspar motifP-value
MA0002.20.244
MA0003.10.324
MA0004.10.678
MA0006.10.318
MA0007.10.695
MA0009.10.76
MA0014.10.351
MA0017.10.697
MA0018.21.73242e-6
MA0019.10.891
MA0024.14.64257e-5
MA0025.10.00203
MA0027.10.598
MA0028.10.0436
MA0029.10.963
MA0030.10.0159
MA0031.10.00479
MA0035.20.573
MA0038.10.726
MA0039.20.79
MA0040.10.92
MA0041.10.86
MA0042.10.79
MA0043.11.66743e-9
MA0046.10.383
MA0047.20.0304
MA0048.10.0017
MA0050.10.314
MA0051.10.387
MA0052.10.00149
MA0055.10.00436
MA0057.10.144
MA0058.10.155
MA0059.10.0815
MA0060.10.258
MA0061.10.337
MA0062.20.586
MA0065.20.117
MA0066.10.375
MA0067.16.87172e-4
MA0068.18.43059e-5
MA0069.10.769
MA0070.10.605
MA0071.10.589
MA0072.10.132
MA0073.10.705
MA0074.10.759
MA0076.10.829
MA0077.10.368
MA0078.10.86
MA0079.20.0218
MA0080.22.94732e-12
MA0081.10.0044
MA0083.10.365
MA0084.10.414
MA0087.10.401
MA0088.10.00249
MA0090.10.00302
MA0091.10.964
MA0092.10.248
MA0093.10.799
MA0099.20.179
MA0100.10.731
MA0101.10.254
MA0102.25.50757e-4
MA0103.10.465
MA0104.20.343
MA0105.10.679
MA0106.10.0264
MA0107.10.109
MA0108.20.0169
MA0111.10.846
MA0112.20.00897
MA0113.10.515
MA0114.10.0866
MA0115.10.172
MA0116.10.959
MA0117.10.929
MA0119.10.00765
MA0122.10.514
MA0124.10.56
MA0125.10.749
MA0131.10.877
MA0135.10.00612
MA0136.12.01726e-9
MA0137.20.504
MA0138.20.0839
MA0139.10.683
MA0140.10.662
MA0141.10.532
MA0142.10.386
MA0143.10.976
MA0144.10.909
MA0145.10.212
MA0146.10.872
MA0147.10.135
MA0148.10.106
MA0149.10.0833
MA0150.10.155
MA0152.10.74
MA0153.10.251
MA0154.10.949
MA0155.10.931
MA0156.10.00178
MA0157.10.0324
MA0159.10.736
MA0160.10.886
MA0162.10.392
MA0163.10.311
MA0164.10.314
MA0258.10.348
MA0259.10.863



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13067

Novel motifP-value
10.32
100.423
1000.14
1010.236
1020.314
1030.272
1040.752
1050.0248
1060.577
1070.0454
1080.887
1090.0826
110.793
1100.546
1110.994
1120.762
1130.00921
1140.402
1150.309
1160.453
1170.891
1180.488
1190.301
120.774
1200.276
1210.663
1220.422
1230.0839
1240.0168
1250.934
1260.703
1270.77
1280.228
1290.963
130.0989
1300.431
1310.916
1320.937
1330.0788
1340.458
1350.42
1360.156
1370.136
1380.97
1390.0824
140.319
1400.221
1410.758
1420.606
1430.226
1440.491
1450.571
1460.656
1470.242
1480.411
1490.841
150.404
1500.0326
1510.264
1520.179
1530.417
1540.966
1550.0127
1560.173
1570.18
1580.133
1590.781
160.146
1600.312
1610.532
1620.934
1630.804
1640.00787
1650.817
1660.289
1670.308
1680.397
1690.0169
170.808
180.144
190.7
20.711
200.996
210.0726
220.923
230.837
240.621
250.762
260.172
270.848
280.622
290.00509
30.281
300.649
310.634
320.035
330.305
340.166
350.335
360.837
370.92
380.868
390.963
40.372
400.255
410.0927
420.244
430.452
440.313
450.253
460.501
470.619
480.544
490.361
50.849
500.96
510.585
520.51
530.466
540.996
550.796
560.495
570.0624
580.238
590.601
60.918
600.439
610.929
620.577
630.641
640.848
650.911
660.415
670.78
680.861
690.971
70.956
700.268
710.00743
720.691
730.338
740.0135
750.742
760.433
770.212
780.44
790.0574
80.0572
800.114
810.0534
821
830.796
840.49
850.55
860.0649
870.192
880.506
890.354
90.333
900.436
910.596
920.561
930.751
940.472
950.801
960.647
970.88
980.099
990.0417



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13067


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000076 (squamous epithelial cell)
0000213 (lining cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000077 (mesothelial cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0102424 (mesothelioma cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)

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