FF:11236-116D3: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005778 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005778 | ||
|accession_numbers=CAGE;DRX008223;DRR009095;DRZ000520;DRZ001905;DRZ011870;DRZ013255 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037057;DRR041423;DRZ007065 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000055,UBERON:0004111,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002049,UBERON:0007798,UBERON:0001473,UBERON:0002465,UBERON:0004535,UBERON:0004536,UBERON:0006558,UBERON:0002193,UBERON:0002405,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0002138 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000046,FF:0000001,FF:0000049 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Lymphatic%252c%2520donor1.CNhs10865.11236-116D3.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Lymphatic%252c%2520donor1.CNhs10865.11236-116D3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Lymphatic%252c%2520donor1.CNhs10865.11236-116D3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Lymphatic%252c%2520donor1.CNhs10865.11236-116D3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Endothelial%2520Cells%2520-%2520Lymphatic%252c%2520donor1.CNhs10865.11236-116D3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11236-116D3 | |id=FF:11236-116D3 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000049 | ||
|is_obsolete= | |||
|library_id=CNhs10865 | |||
|library_id_phase_based=2:CNhs10865 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11236 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10005.TGACCA.11236 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11236 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10005.TGACCA.11236 | |||
|name=Endothelial Cells - Lymphatic, donor1 | |name=Endothelial Cells - Lymphatic, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10865,LSID702,release008,COMPLETED | |profile_hcage=CNhs10865,LSID702,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10005,,, | |profile_srnaseq=SRhi10005,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.199912460786876,0,0.0828683586797479,-0.182579067135984,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154956838940969,0,0,0,0.365918628822395,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0.0998244934409575,0,0.198627121554274,0,0,0,0,0,0,0,0,0.0256972256076444,0,0,0,0.0998244934409575,0,0,0,-0.0969923612426051,0,0,0.151915961996816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273063639781855,0,0,0,0.0413776666291323,0.394183691507218,0,0,0,0,-0.0980353512377064,-0.0885649540804165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.0452946695602787,0.141418794395916,0,0,0,0,0,0 | |||
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| |||
|rna_box=116 | |rna_box=116 | ||
|rna_catalog_number=SC2015 | |rna_catalog_number=SC2015 | ||
| Line 56: | Line 82: | ||
|rna_tube_id=116D3 | |rna_tube_id=116D3 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10005.TGACCA | |||
|sample_age=fetal | |sample_age=fetal | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=unknown | |sample_ethnicity=unknown | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.43736318948165e-232!GO:0005737;cytoplasm;1.82178644480568e-190!GO:0043226;organelle;3.89817608178944e-180!GO:0043229;intracellular organelle;1.59580292710039e-179!GO:0043231;intracellular membrane-bound organelle;2.07192596266959e-173!GO:0043227;membrane-bound organelle;3.0830800300936e-173!GO:0044444;cytoplasmic part;1.4911374155701e-136!GO:0044422;organelle part;3.28099588159665e-126!GO:0044446;intracellular organelle part;1.17871529618568e-124!GO:0032991;macromolecular complex;6.51796024740893e-87!GO:0044238;primary metabolic process;2.07260867248441e-84!GO:0044237;cellular metabolic process;1.59002299654185e-83!GO:0043170;macromolecule metabolic process;2.82469117321306e-79!GO:0030529;ribonucleoprotein complex;2.39181001665153e-76!GO:0005515;protein binding;5.0024315369875e-76!GO:0003723;RNA binding;2.93506394101846e-66!GO:0043233;organelle lumen;3.93191907229607e-64!GO:0031974;membrane-enclosed lumen;3.93191907229607e-64!GO:0005739;mitochondrion;1.02247585208863e-62!GO:0005634;nucleus;2.52603622487387e-62!GO:0044428;nuclear part;3.59259303721757e-62!GO:0019538;protein metabolic process;5.78041800551483e-57!GO:0031090;organelle membrane;1.33592016581508e-52!GO:0044260;cellular macromolecule metabolic process;2.28735165173609e-50!GO:0044267;cellular protein metabolic process;3.20351659925079e-50!GO:0005840;ribosome;1.16442309893014e-46!GO:0016043;cellular component organization and biogenesis;1.7479630177733e-46!GO:0033036;macromolecule localization;4.66991563857419e-46!GO:0015031;protein transport;1.22525871977069e-45!GO:0006412;translation;3.29623736919072e-44!GO:0043234;protein complex;5.77755224614861e-44!GO:0045184;establishment of protein localization;1.38259245499234e-42!GO:0043283;biopolymer metabolic process;1.559029349151e-42!GO:0008104;protein localization;2.16928908242298e-42!GO:0006396;RNA processing;2.42264833526113e-42!GO:0044429;mitochondrial part;4.63402941484538e-42!GO:0005829;cytosol;4.66041446694052e-41!GO:0003735;structural constituent of ribosome;4.81469592564669e-41!GO:0031967;organelle envelope;8.25658265640365e-40!GO:0031975;envelope;1.91914171677108e-39!GO:0031981;nuclear lumen;2.51645149094019e-38!GO:0033279;ribosomal subunit;2.98296907756939e-36!GO:0046907;intracellular transport;7.85791686098542e-36!GO:0010467;gene expression;1.33803512688497e-35!GO:0016071;mRNA metabolic process;8.00473021698288e-35!GO:0009058;biosynthetic process;1.69720965068574e-34!GO:0009059;macromolecule biosynthetic process;1.81302777066711e-33!GO:0008380;RNA splicing;2.62314331245725e-32!GO:0044249;cellular biosynthetic process;3.56022298522081e-32!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.37403795243838e-32!GO:0006397;mRNA processing;5.47085084506351e-30!GO:0006886;intracellular protein transport;6.96571642937948e-30!GO:0005740;mitochondrial envelope;8.24716483481787e-29!GO:0006996;organelle organization and biogenesis;1.26845481631927e-28!GO:0065003;macromolecular complex assembly;2.9382495907259e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.23885040997892e-27!GO:0031966;mitochondrial membrane;2.23455868740426e-27!GO:0043228;non-membrane-bound organelle;1.28062521047609e-26!GO:0043232;intracellular non-membrane-bound organelle;1.28062521047609e-26!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.03837228151213e-26!GO:0019866;organelle inner membrane;2.36725896355544e-26!GO:0022607;cellular component assembly;5.26965921077243e-26!GO:0000166;nucleotide binding;1.44174926277619e-25!GO:0051649;establishment of cellular localization;1.96903608508883e-24!GO:0051641;cellular localization;2.17446892970735e-24!GO:0005743;mitochondrial inner membrane;2.59133107154821e-24!GO:0005654;nucleoplasm;5.31527984262017e-24!GO:0044445;cytosolic part;1.73170548128682e-23!GO:0005681;spliceosome;4.59751162378497e-23!GO:0012505;endomembrane system;4.63370372912028e-22!GO:0016462;pyrophosphatase activity;6.37726119646487e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.06615235788087e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;9.30143645387782e-22!GO:0006119;oxidative phosphorylation;1.5471096595233e-21!GO:0017111;nucleoside-triphosphatase activity;3.23972127415851e-21!GO:0006512;ubiquitin cycle;1.32283390254027e-19!GO:0016192;vesicle-mediated transport;1.37674253992108e-19!GO:0032553;ribonucleotide binding;2.63901108954213e-19!GO:0032555;purine ribonucleotide binding;2.63901108954213e-19!GO:0015935;small ribosomal subunit;2.81990170305952e-19!GO:0044455;mitochondrial membrane part;4.00531147988469e-19!GO:0006259;DNA metabolic process;4.40851353219738e-19!GO:0044451;nucleoplasm part;4.40851353219738e-19!GO:0016874;ligase activity;1.0564806512195e-18!GO:0017076;purine nucleotide binding;1.53255083635728e-18!GO:0006457;protein folding;1.65666127457687e-18!GO:0043412;biopolymer modification;2.05589512015091e-18!GO:0022618;protein-RNA complex assembly;3.52780908139933e-18!GO:0005783;endoplasmic reticulum;3.82934955746644e-18!GO:0044265;cellular macromolecule catabolic process;4.95318113583728e-18!GO:0015934;large ribosomal subunit;6.56960414529904e-18!GO:0005794;Golgi apparatus;6.6741297687436e-18!GO:0048770;pigment granule;3.03444185999991e-17!GO:0042470;melanosome;3.03444185999991e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;4.34298106378541e-17!GO:0019941;modification-dependent protein catabolic process;7.82319159870873e-17!GO:0043632;modification-dependent macromolecule catabolic process;7.82319159870873e-17!GO:0006464;protein modification process;9.43073094296662e-17!GO:0044257;cellular protein catabolic process;1.12993411638998e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.3064870248342e-16!GO:0043285;biopolymer catabolic process;1.73207858603333e-16!GO:0003676;nucleic acid binding;1.95970871719899e-16!GO:0031980;mitochondrial lumen;2.59749556813727e-16!GO:0005759;mitochondrial matrix;2.59749556813727e-16!GO:0005746;mitochondrial respiratory chain;3.48726570683341e-16!GO:0009057;macromolecule catabolic process;5.26965214039828e-16!GO:0000502;proteasome complex (sensu Eukaryota);8.17523058153749e-16!GO:0008134;transcription factor binding;2.08160058278026e-15!GO:0051186;cofactor metabolic process;2.18934242730396e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.44957744639445e-15!GO:0006605;protein targeting;4.24984379162147e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.31631370923505e-15!GO:0007049;cell cycle;7.8914327152209e-15!GO:0032559;adenyl ribonucleotide binding;8.70283715843372e-15!GO:0044248;cellular catabolic process;9.72580908287138e-15!GO:0005524;ATP binding;1.12420107462128e-14!GO:0030163;protein catabolic process;1.16287081127139e-14!GO:0048193;Golgi vesicle transport;1.53931732307095e-14!GO:0044432;endoplasmic reticulum part;1.5450248314413e-14!GO:0005730;nucleolus;1.99545026402919e-14!GO:0008135;translation factor activity, nucleic acid binding;3.31911372225225e-14!GO:0043687;post-translational protein modification;3.37319807853501e-14!GO:0016070;RNA metabolic process;3.37319807853501e-14!GO:0030554;adenyl nucleotide binding;5.63834249718465e-14!GO:0050136;NADH dehydrogenase (quinone) activity;9.2584697131093e-14!GO:0003954;NADH dehydrogenase activity;9.2584697131093e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.2584697131093e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.12227751705684e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.43735632739716e-13!GO:0006974;response to DNA damage stimulus;2.09413012417239e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;2.44166842947319e-12!GO:0000375;RNA splicing, via transesterification reactions;2.44166842947319e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.44166842947319e-12!GO:0051082;unfolded protein binding;3.19932448396819e-12!GO:0042775;organelle ATP synthesis coupled electron transport;4.28892579205156e-12!GO:0042773;ATP synthesis coupled electron transport;4.28892579205156e-12!GO:0005761;mitochondrial ribosome;4.66518766999113e-12!GO:0000313;organellar ribosome;4.66518766999113e-12!GO:0006732;coenzyme metabolic process;5.17047202143027e-12!GO:0030964;NADH dehydrogenase complex (quinone);6.0891511141569e-12!GO:0045271;respiratory chain complex I;6.0891511141569e-12!GO:0005747;mitochondrial respiratory chain complex I;6.0891511141569e-12!GO:0005635;nuclear envelope;6.10427581253438e-12!GO:0016604;nuclear body;7.6084006360882e-12!GO:0008639;small protein conjugating enzyme activity;7.80867655726134e-12!GO:0003743;translation initiation factor activity;8.80370201322529e-12!GO:0042623;ATPase activity, coupled;9.98018644005864e-12!GO:0006413;translational initiation;1.29201464209531e-11!GO:0004842;ubiquitin-protein ligase activity;1.37621435173751e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.61476143412758e-11!GO:0016887;ATPase activity;1.86147267965639e-11!GO:0012501;programmed cell death;2.06764088681103e-11!GO:0006915;apoptosis;2.20459930799566e-11!GO:0019787;small conjugating protein ligase activity;3.14891392104054e-11!GO:0031965;nuclear membrane;4.58470300679394e-11!GO:0008565;protein transporter activity;7.67326880127794e-11!GO:0006163;purine nucleotide metabolic process;8.90806467803866e-11!GO:0009259;ribonucleotide metabolic process;9.30175539294538e-11!GO:0005793;ER-Golgi intermediate compartment;1.07909493294095e-10!GO:0009150;purine ribonucleotide metabolic process;1.48039125256694e-10!GO:0050794;regulation of cellular process;1.55334509783807e-10!GO:0006446;regulation of translational initiation;1.59771410514826e-10!GO:0022402;cell cycle process;1.64617764832843e-10!GO:0044453;nuclear membrane part;1.69849883908164e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.99006029428653e-10!GO:0004386;helicase activity;3.15308336977402e-10!GO:0009055;electron carrier activity;3.15695347485211e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.51366007851269e-10!GO:0008219;cell death;3.91586733149822e-10!GO:0016265;death;3.91586733149822e-10!GO:0005789;endoplasmic reticulum membrane;5.41688571924357e-10!GO:0006461;protein complex assembly;6.82792200055589e-10!GO:0006281;DNA repair;7.38801666308921e-10!GO:0016881;acid-amino acid ligase activity;7.72664021261359e-10!GO:0016607;nuclear speck;7.85391028733117e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.08137644401898e-09!GO:0003712;transcription cofactor activity;1.09112848425689e-09!GO:0006913;nucleocytoplasmic transport;1.11453201224959e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.20131726108213e-09!GO:0006164;purine nucleotide biosynthetic process;1.40746426345682e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.59459571003391e-09!GO:0009144;purine nucleoside triphosphate metabolic process;1.59459571003391e-09!GO:0042254;ribosome biogenesis and assembly;1.89159306782638e-09!GO:0009141;nucleoside triphosphate metabolic process;2.2495143120396e-09!GO:0009152;purine ribonucleotide biosynthetic process;2.32623533330612e-09!GO:0051169;nuclear transport;2.61307384341122e-09!GO:0009056;catabolic process;3.06547983887055e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.49455635262334e-09!GO:0009260;ribonucleotide biosynthetic process;4.42035903576191e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.96106076017527e-09!GO:0008026;ATP-dependent helicase activity;5.15198961146455e-09!GO:0006793;phosphorus metabolic process;6.21587414433737e-09!GO:0006796;phosphate metabolic process;6.21587414433737e-09!GO:0009060;aerobic respiration;8.45861369141703e-09!GO:0015986;ATP synthesis coupled proton transport;1.01133470621926e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.01133470621926e-08!GO:0003924;GTPase activity;1.11761004841167e-08!GO:0046034;ATP metabolic process;1.26325881103736e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.32762122495061e-08!GO:0019829;cation-transporting ATPase activity;1.46369776345115e-08!GO:0009719;response to endogenous stimulus;1.46369776345115e-08!GO:0051726;regulation of cell cycle;1.5029070955724e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.52605292449768e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.52605292449768e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.72568347606621e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.98210405661161e-08!GO:0031988;membrane-bound vesicle;2.01756569701277e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.01756569701277e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.01756569701277e-08!GO:0005768;endosome;2.02037271961448e-08!GO:0016310;phosphorylation;2.02037271961448e-08!GO:0016023;cytoplasmic membrane-bound vesicle;2.54505462620992e-08!GO:0031252;leading edge;2.55956243738577e-08!GO:0000074;regulation of progression through cell cycle;2.84026686135634e-08!GO:0044431;Golgi apparatus part;3.23656510530672e-08!GO:0048523;negative regulation of cellular process;3.3868588249955e-08!GO:0006888;ER to Golgi vesicle-mediated transport;4.98402031735397e-08!GO:0005643;nuclear pore;5.21056966819743e-08!GO:0045333;cellular respiration;5.36627724458443e-08!GO:0031982;vesicle;7.68572079324916e-08!GO:0006399;tRNA metabolic process;9.15039009358356e-08!GO:0005773;vacuole;9.99437456927027e-08!GO:0017038;protein import;1.09520917033232e-07!GO:0009117;nucleotide metabolic process;1.10786464415859e-07!GO:0031410;cytoplasmic vesicle;1.40860421271669e-07!GO:0006754;ATP biosynthetic process;1.40860421271669e-07!GO:0006753;nucleoside phosphate metabolic process;1.40860421271669e-07!GO:0065002;intracellular protein transport across a membrane;1.47724503452056e-07!GO:0051246;regulation of protein metabolic process;1.59729329283236e-07!GO:0005525;GTP binding;1.62147470236656e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;1.72249565327851e-07!GO:0030036;actin cytoskeleton organization and biogenesis;1.7566957147814e-07!GO:0016787;hydrolase activity;1.81199568616938e-07!GO:0032446;protein modification by small protein conjugation;1.85123808792007e-07!GO:0051188;cofactor biosynthetic process;2.06070420953887e-07!GO:0000278;mitotic cell cycle;2.19965760384815e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.24646160475879e-07!GO:0051276;chromosome organization and biogenesis;2.31107755714121e-07!GO:0006403;RNA localization;3.32334519256111e-07!GO:0019899;enzyme binding;3.53023549981281e-07!GO:0042981;regulation of apoptosis;3.61019428804401e-07!GO:0016567;protein ubiquitination;3.62122472611377e-07!GO:0050657;nucleic acid transport;3.62122472611377e-07!GO:0051236;establishment of RNA localization;3.62122472611377e-07!GO:0050658;RNA transport;3.62122472611377e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.08581071567772e-07!GO:0004812;aminoacyl-tRNA ligase activity;4.08581071567772e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.08581071567772e-07!GO:0006099;tricarboxylic acid cycle;4.16671166870182e-07!GO:0046356;acetyl-CoA catabolic process;4.16671166870182e-07!GO:0043067;regulation of programmed cell death;4.66940412766498e-07!GO:0006323;DNA packaging;4.82380265615276e-07!GO:0016044;membrane organization and biogenesis;5.06921181614378e-07!GO:0048475;coated membrane;5.32191307906666e-07!GO:0030117;membrane coat;5.32191307906666e-07!GO:0046930;pore complex;6.43658126908093e-07!GO:0030120;vesicle coat;6.44802271288535e-07!GO:0030662;coated vesicle membrane;6.44802271288535e-07!GO:0030532;small nuclear ribonucleoprotein complex;6.57390485132345e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.81792981463481e-07!GO:0048519;negative regulation of biological process;7.25675019487979e-07!GO:0043038;amino acid activation;7.40712754052355e-07!GO:0006418;tRNA aminoacylation for protein translation;7.40712754052355e-07!GO:0043039;tRNA aminoacylation;7.40712754052355e-07!GO:0030029;actin filament-based process;8.11635540742038e-07!GO:0005839;proteasome core complex (sensu Eukaryota);8.50588476225164e-07!GO:0000151;ubiquitin ligase complex;9.198400872969e-07!GO:0050789;regulation of biological process;9.50372671762271e-07!GO:0005788;endoplasmic reticulum lumen;9.85634601914162e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.24544195314708e-06!GO:0005770;late endosome;1.24544195314708e-06!GO:0006084;acetyl-CoA metabolic process;1.34624396944986e-06!GO:0000323;lytic vacuole;1.55804736479284e-06!GO:0005764;lysosome;1.55804736479284e-06!GO:0051187;cofactor catabolic process;1.66642070000934e-06!GO:0000139;Golgi membrane;1.7549079272645e-06!GO:0007005;mitochondrion organization and biogenesis;1.792610098979e-06!GO:0007264;small GTPase mediated signal transduction;2.25170255155566e-06!GO:0045786;negative regulation of progression through cell cycle;2.3907959692914e-06!GO:0043069;negative regulation of programmed cell death;2.60695233552194e-06!GO:0006916;anti-apoptosis;3.03975113466706e-06!GO:0032561;guanyl ribonucleotide binding;3.64705997094694e-06!GO:0019001;guanyl nucleotide binding;3.64705997094694e-06!GO:0044440;endosomal part;3.66100147935651e-06!GO:0010008;endosome membrane;3.66100147935651e-06!GO:0043066;negative regulation of apoptosis;3.77752024861333e-06!GO:0016740;transferase activity;4.35482064174793e-06!GO:0009108;coenzyme biosynthetic process;4.38490379114938e-06!GO:0006366;transcription from RNA polymerase II promoter;4.4141828350722e-06!GO:0004298;threonine endopeptidase activity;4.58463264849217e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.63287009335092e-06!GO:0006364;rRNA processing;4.64418259195146e-06!GO:0006752;group transfer coenzyme metabolic process;4.66436493187758e-06!GO:0000245;spliceosome assembly;4.67707745870913e-06!GO:0045259;proton-transporting ATP synthase complex;4.68835984550808e-06!GO:0005694;chromosome;4.80710549776924e-06!GO:0009109;coenzyme catabolic process;5.2022312103115e-06!GO:0007243;protein kinase cascade;6.67322890725572e-06!GO:0005769;early endosome;7.00557738310579e-06!GO:0006260;DNA replication;7.45499196932051e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.96794388817569e-06!GO:0016072;rRNA metabolic process;8.13548844548514e-06!GO:0015630;microtubule cytoskeleton;8.25418850385848e-06!GO:0003724;RNA helicase activity;1.00685635876375e-05!GO:0051028;mRNA transport;1.03536829142737e-05!GO:0016568;chromatin modification;1.07833653285855e-05!GO:0051170;nuclear import;1.48346055150226e-05!GO:0006613;cotranslational protein targeting to membrane;1.55031955550184e-05!GO:0031968;organelle outer membrane;1.77712016474128e-05!GO:0008047;enzyme activator activity;1.80464940471799e-05!GO:0007010;cytoskeleton organization and biogenesis;1.82025504644991e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.84459989442549e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.88210501963436e-05!GO:0003713;transcription coactivator activity;2.13927565830678e-05!GO:0019867;outer membrane;2.48607592514464e-05!GO:0003697;single-stranded DNA binding;2.7240065800494e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.08914952556754e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;3.12810116229368e-05!GO:0015399;primary active transmembrane transporter activity;3.12810116229368e-05!GO:0006606;protein import into nucleus;3.28706069358406e-05!GO:0016853;isomerase activity;3.87056639503881e-05!GO:0005813;centrosome;4.06592896646936e-05!GO:0016779;nucleotidyltransferase activity;4.50237636427294e-05!GO:0016491;oxidoreductase activity;4.61088330290962e-05!GO:0051301;cell division;4.91337576873462e-05!GO:0030867;rough endoplasmic reticulum membrane;5.06237655303162e-05!GO:0005798;Golgi-associated vesicle;5.4419491393929e-05!GO:0043623;cellular protein complex assembly;5.86909303832933e-05!GO:0005667;transcription factor complex;6.21537532370917e-05!GO:0044427;chromosomal part;6.51639763809413e-05!GO:0043566;structure-specific DNA binding;6.77636550783062e-05!GO:0048471;perinuclear region of cytoplasm;7.0228288850172e-05!GO:0008092;cytoskeletal protein binding;7.04553212227703e-05!GO:0005741;mitochondrial outer membrane;7.3664185328405e-05!GO:0008654;phospholipid biosynthetic process;7.45263395793059e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;7.47779557602929e-05!GO:0000087;M phase of mitotic cell cycle;9.20986702387316e-05!GO:0003714;transcription corepressor activity;9.37151095031146e-05!GO:0005096;GTPase activator activity;9.88921485582103e-05!GO:0045454;cell redox homeostasis;0.000110477200633046!GO:0016859;cis-trans isomerase activity;0.000117050852315823!GO:0019843;rRNA binding;0.00011769459382143!GO:0007067;mitosis;0.000125687050313531!GO:0005815;microtubule organizing center;0.000126969596230453!GO:0015980;energy derivation by oxidation of organic compounds;0.000136401670128381!GO:0005762;mitochondrial large ribosomal subunit;0.000152049390725444!GO:0000315;organellar large ribosomal subunit;0.000152049390725444!GO:0009165;nucleotide biosynthetic process;0.000153090081859816!GO:0005905;coated pit;0.000161193886062003!GO:0006333;chromatin assembly or disassembly;0.000168670215707166!GO:0000785;chromatin;0.000169061734856172!GO:0033116;ER-Golgi intermediate compartment membrane;0.000178469910853674!GO:0022403;cell cycle phase;0.000179145292380231!GO:0006897;endocytosis;0.000194374689169396!GO:0010324;membrane invagination;0.000194374689169396!GO:0065009;regulation of a molecular function;0.000194748646270652!GO:0007265;Ras protein signal transduction;0.000197340658646227!GO:0042802;identical protein binding;0.000200723353879223!GO:0065004;protein-DNA complex assembly;0.000210296108244534!GO:0016564;transcription repressor activity;0.000215504435853892!GO:0051427;hormone receptor binding;0.000229404783939393!GO:0008186;RNA-dependent ATPase activity;0.000230314636317708!GO:0030027;lamellipodium;0.000236199159107661!GO:0043021;ribonucleoprotein binding;0.000269725104726881!GO:0005885;Arp2/3 protein complex;0.00027436443661106!GO:0006612;protein targeting to membrane;0.000338772082289161!GO:0043492;ATPase activity, coupled to movement of substances;0.000347272515639224!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000379294446039899!GO:0065007;biological regulation;0.000392195350160689!GO:0001726;ruffle;0.000399197074903928!GO:0005048;signal sequence binding;0.000405431014768558!GO:0035257;nuclear hormone receptor binding;0.000454586911381379!GO:0051087;chaperone binding;0.000462705634800639!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000474442826428821!GO:0006091;generation of precursor metabolites and energy;0.000492614373770168!GO:0019222;regulation of metabolic process;0.000558910046678803!GO:0051789;response to protein stimulus;0.000588152708855543!GO:0006986;response to unfolded protein;0.000588152708855543!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000599519658485514!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000664287831114962!GO:0016197;endosome transport;0.000664287831114962!GO:0008250;oligosaccharyl transferase complex;0.000672688498355151!GO:0004004;ATP-dependent RNA helicase activity;0.000691407740873915!GO:0006891;intra-Golgi vesicle-mediated transport;0.00071625442339329!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000734517783627184!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000738797998537713!GO:0005083;small GTPase regulator activity;0.000738797998537713!GO:0016363;nuclear matrix;0.000742474949013752!GO:0000314;organellar small ribosomal subunit;0.000760253844135097!GO:0005763;mitochondrial small ribosomal subunit;0.000760253844135097!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000841796672475322!GO:0016563;transcription activator activity;0.000845800861241015!GO:0051920;peroxiredoxin activity;0.000879571257206796!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000939441913343447!GO:0004576;oligosaccharyl transferase activity;0.000961640185953536!GO:0016126;sterol biosynthetic process;0.000992499071469774!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00102251686331615!GO:0030133;transport vesicle;0.00104127755452395!GO:0003729;mRNA binding;0.00104127755452395!GO:0008632;apoptotic program;0.00113833049487653!GO:0009967;positive regulation of signal transduction;0.00122129864404975!GO:0043681;protein import into mitochondrion;0.00128678551653025!GO:0030659;cytoplasmic vesicle membrane;0.00134749151640516!GO:0003899;DNA-directed RNA polymerase activity;0.00136609312533626!GO:0031324;negative regulation of cellular metabolic process;0.00140460481277269!GO:0045045;secretory pathway;0.00150855177383622!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00153301022414793!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00153301022414793!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00153301022414793!GO:0009892;negative regulation of metabolic process;0.00164806065801721!GO:0051168;nuclear export;0.00165240114135398!GO:0006626;protein targeting to mitochondrion;0.00178479668280064!GO:0006695;cholesterol biosynthetic process;0.00179824258594056!GO:0005774;vacuolar membrane;0.00180569529120403!GO:0044262;cellular carbohydrate metabolic process;0.00188524356615004!GO:0000059;protein import into nucleus, docking;0.00201528670500238!GO:0006818;hydrogen transport;0.00205216323340099!GO:0007242;intracellular signaling cascade;0.00205719071185056!GO:0015992;proton transport;0.00209238807534018!GO:0048522;positive regulation of cellular process;0.00209238807534018!GO:0005791;rough endoplasmic reticulum;0.00209238807534018!GO:0030695;GTPase regulator activity;0.00213476080605083!GO:0006402;mRNA catabolic process;0.00222257019762298!GO:0018196;peptidyl-asparagine modification;0.00222257019762298!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00222257019762298!GO:0008234;cysteine-type peptidase activity;0.00224932295443993!GO:0031072;heat shock protein binding;0.00236343307847925!GO:0030658;transport vesicle membrane;0.00244893091728044!GO:0006414;translational elongation;0.0024497455303393!GO:0005099;Ras GTPase activator activity;0.00245460753239051!GO:0006509;membrane protein ectodomain proteolysis;0.00267039928390693!GO:0033619;membrane protein proteolysis;0.00267039928390693!GO:0030118;clathrin coat;0.00268113507514764!GO:0008139;nuclear localization sequence binding;0.00283171210776891!GO:0044433;cytoplasmic vesicle part;0.00288295705924468!GO:0006839;mitochondrial transport;0.00290137630920169!GO:0030041;actin filament polymerization;0.00292925742592061!GO:0030833;regulation of actin filament polymerization;0.00312431547300057!GO:0006383;transcription from RNA polymerase III promoter;0.00312974501858119!GO:0008361;regulation of cell size;0.00313451029387556!GO:0033673;negative regulation of kinase activity;0.0032005777294125!GO:0006469;negative regulation of protein kinase activity;0.0032005777294125!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00326524754622574!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0033607085224739!GO:0006950;response to stress;0.00338783937891351!GO:0007006;mitochondrial membrane organization and biogenesis;0.00366117683764359!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00367956692892741!GO:0000279;M phase;0.00380019686498868!GO:0003779;actin binding;0.00393887922818406!GO:0007050;cell cycle arrest;0.00400043818168165!GO:0030880;RNA polymerase complex;0.00409741668591546!GO:0048500;signal recognition particle;0.00416659953166009!GO:0030663;COPI coated vesicle membrane;0.00424634428368016!GO:0030126;COPI vesicle coat;0.00424634428368016!GO:0012506;vesicle membrane;0.00428183658512497!GO:0031901;early endosome membrane;0.00428341756245693!GO:0031902;late endosome membrane;0.00430124407233435!GO:0030134;ER to Golgi transport vesicle;0.00436658326176073!GO:0016049;cell growth;0.00454516432513352!GO:0044437;vacuolar part;0.00463030488532599!GO:0051329;interphase of mitotic cell cycle;0.00464171988746595!GO:0051348;negative regulation of transferase activity;0.00475484123529765!GO:0031625;ubiquitin protein ligase binding;0.00481001679197709!GO:0050790;regulation of catalytic activity;0.00481045465660539!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00482712925118057!GO:0022890;inorganic cation transmembrane transporter activity;0.0048344007106813!GO:0001558;regulation of cell growth;0.00483686037250977!GO:0030521;androgen receptor signaling pathway;0.00484487815577089!GO:0009966;regulation of signal transduction;0.0049679644278352!GO:0007040;lysosome organization and biogenesis;0.00503168416086772!GO:0035258;steroid hormone receptor binding;0.00510602306122717!GO:0007034;vacuolar transport;0.00510765317786522!GO:0004674;protein serine/threonine kinase activity;0.00523958867575367!GO:0004177;aminopeptidase activity;0.00531293532119803!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00541264782192189!GO:0048487;beta-tubulin binding;0.00543674464142472!GO:0005637;nuclear inner membrane;0.00546849867024133!GO:0008154;actin polymerization and/or depolymerization;0.00554813198042197!GO:0046489;phosphoinositide biosynthetic process;0.00561582945986419!GO:0007266;Rho protein signal transduction;0.00564156231701434!GO:0051128;regulation of cellular component organization and biogenesis;0.00576936725312708!GO:0006289;nucleotide-excision repair;0.0057959727039824!GO:0017166;vinculin binding;0.00586750020399802!GO:0046467;membrane lipid biosynthetic process;0.00589901313481437!GO:0046474;glycerophospholipid biosynthetic process;0.00614564259492563!GO:0006401;RNA catabolic process;0.00629436787070854!GO:0003690;double-stranded DNA binding;0.00643797794687492!GO:0030660;Golgi-associated vesicle membrane;0.00659048776488284!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00662199346403224!GO:0015002;heme-copper terminal oxidase activity;0.00662199346403224!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00662199346403224!GO:0004129;cytochrome-c oxidase activity;0.00662199346403224!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00673996906367678!GO:0045047;protein targeting to ER;0.00673996906367678!GO:0051252;regulation of RNA metabolic process;0.00689720801632836!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0071394956868536!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0071394956868536!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00730670713853675!GO:0051540;metal cluster binding;0.00749451705394744!GO:0051536;iron-sulfur cluster binding;0.00749451705394744!GO:0051325;interphase;0.00750088385591856!GO:0030137;COPI-coated vesicle;0.00752342127492237!GO:0032940;secretion by cell;0.00781170086199885!GO:0006352;transcription initiation;0.00799440334484541!GO:0005765;lysosomal membrane;0.00808900971813395!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00810120153659603!GO:0000428;DNA-directed RNA polymerase complex;0.00810120153659603!GO:0030127;COPII vesicle coat;0.00812437371596147!GO:0012507;ER to Golgi transport vesicle membrane;0.00812437371596147!GO:0006740;NADPH regeneration;0.00898333075676362!GO:0006098;pentose-phosphate shunt;0.00898333075676362!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00925487968397074!GO:0030132;clathrin coat of coated pit;0.00946135706343435!GO:0007033;vacuole organization and biogenesis;0.00953874488033027!GO:0043488;regulation of mRNA stability;0.0101207122853825!GO:0043487;regulation of RNA stability;0.0101207122853825!GO:0005684;U2-dependent spliceosome;0.0108238199466966!GO:0051336;regulation of hydrolase activity;0.0110012280235228!GO:0008312;7S RNA binding;0.0110550828413841!GO:0005869;dynactin complex;0.0110566685712273!GO:0043022;ribosome binding;0.0113185011821538!GO:0008320;protein transmembrane transporter activity;0.01168533036634!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0121571771051711!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0124079459124007!GO:0016301;kinase activity;0.0124917620694003!GO:0044452;nucleolar part;0.0125170089808979!GO:0008180;signalosome;0.0128401611116749!GO:0016481;negative regulation of transcription;0.0128408511267147!GO:0051539;4 iron, 4 sulfur cluster binding;0.0132301461464525!GO:0033093;Weibel-Palade body;0.0135800630227294!GO:0016408;C-acyltransferase activity;0.0137563005807392!GO:0000287;magnesium ion binding;0.0139245101837861!GO:0003678;DNA helicase activity;0.0139585334331795!GO:0008022;protein C-terminus binding;0.0140880002436847!GO:0005819;spindle;0.0142971344845604!GO:0006892;post-Golgi vesicle-mediated transport;0.0143420404238738!GO:0030032;lamellipodium biogenesis;0.0144772042965598!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0145124419792141!GO:0022406;membrane docking;0.0145356369810634!GO:0048278;vesicle docking;0.0145356369810634!GO:0015631;tubulin binding;0.0146247629503819!GO:0005832;chaperonin-containing T-complex;0.0146449787641381!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0146449787641381!GO:0033043;regulation of organelle organization and biogenesis;0.0146449787641381!GO:0006650;glycerophospholipid metabolic process;0.0150351253669342!GO:0003684;damaged DNA binding;0.0154671742028377!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0161166188750434!GO:0000209;protein polyubiquitination;0.0161166188750434!GO:0008033;tRNA processing;0.0162280199845774!GO:0022408;negative regulation of cell-cell adhesion;0.0165179413611275!GO:0003756;protein disulfide isomerase activity;0.0167560001234213!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0167560001234213!GO:0030119;AP-type membrane coat adaptor complex;0.0168426787382138!GO:0030518;steroid hormone receptor signaling pathway;0.0169585014483108!GO:0015036;disulfide oxidoreductase activity;0.0169900685700644!GO:0016272;prefoldin complex;0.0170206471084288!GO:0030031;cell projection biogenesis;0.0181788985831463!GO:0008610;lipid biosynthetic process;0.0181896831127671!GO:0000049;tRNA binding;0.0181896831127671!GO:0000339;RNA cap binding;0.0182572327669873!GO:0046483;heterocycle metabolic process;0.0182612174995808!GO:0001952;regulation of cell-matrix adhesion;0.0187371874734997!GO:0051270;regulation of cell motility;0.0190604874998109!GO:0006302;double-strand break repair;0.0190771195296814!GO:0035035;histone acetyltransferase binding;0.0190956987869325!GO:0007041;lysosomal transport;0.019699591864257!GO:0051101;regulation of DNA binding;0.0201506358442944!GO:0006611;protein export from nucleus;0.0203892769943274!GO:0016251;general RNA polymerase II transcription factor activity;0.0207963876001702!GO:0004197;cysteine-type endopeptidase activity;0.021078334252443!GO:0006595;polyamine metabolic process;0.0210827700527478!GO:0033130;acetylcholine receptor binding;0.0211407803442165!GO:0007021;tubulin folding;0.0212541541513307!GO:0005938;cell cortex;0.0215073528635551!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0215560457295452!GO:0005874;microtubule;0.0218851609122842!GO:0003711;transcription elongation regulator activity;0.021998334684382!GO:0051287;NAD binding;0.0223680773964957!GO:0022415;viral reproductive process;0.0223680773964957!GO:0040011;locomotion;0.0227651691304095!GO:0006516;glycoprotein catabolic process;0.0233666691320764!GO:0006904;vesicle docking during exocytosis;0.0234146412171104!GO:0050681;androgen receptor binding;0.0234359619583847!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0234970587899368!GO:0000118;histone deacetylase complex;0.0237943104192692!GO:0006261;DNA-dependent DNA replication;0.0240399644005345!GO:0043284;biopolymer biosynthetic process;0.0241830527812734!GO:0006497;protein amino acid lipidation;0.0241830527812734!GO:0006334;nucleosome assembly;0.0244690220095768!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0245896195954128!GO:0051059;NF-kappaB binding;0.0246771693364044!GO:0006643;membrane lipid metabolic process;0.0252021868962799!GO:0030131;clathrin adaptor complex;0.0254361157783671!GO:0043086;negative regulation of catalytic activity;0.0255765231051396!GO:0043433;negative regulation of transcription factor activity;0.0255765231051396!GO:0001953;negative regulation of cell-matrix adhesion;0.0257108028453897!GO:0005100;Rho GTPase activator activity;0.0262138098664042!GO:0007162;negative regulation of cell adhesion;0.0264090917966258!GO:0030125;clathrin vesicle coat;0.0264090917966258!GO:0030665;clathrin coated vesicle membrane;0.0264090917966258!GO:0006778;porphyrin metabolic process;0.0264222539547407!GO:0033013;tetrapyrrole metabolic process;0.0264222539547407!GO:0050811;GABA receptor binding;0.0266198227101959!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.027052346416674!GO:0032984;macromolecular complex disassembly;0.0271392379645777!GO:0040012;regulation of locomotion;0.0280982235900205!GO:0031497;chromatin assembly;0.0283944129876312!GO:0031323;regulation of cellular metabolic process;0.029173240543997!GO:0009116;nucleoside metabolic process;0.0291928702314672!GO:0032535;regulation of cellular component size;0.0294686772971267!GO:0043087;regulation of GTPase activity;0.0295826185417189!GO:0030384;phosphoinositide metabolic process;0.0300022980818102!GO:0006310;DNA recombination;0.0300022980818102!GO:0006338;chromatin remodeling;0.0300022980818102!GO:0016601;Rac protein signal transduction;0.0309458808876599!GO:0006405;RNA export from nucleus;0.0309770052059857!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0312306900234965!GO:0043281;regulation of caspase activity;0.0314897677025135!GO:0031418;L-ascorbic acid binding;0.032106609010316!GO:0006919;caspase activation;0.0326042040005505!GO:0019904;protein domain specific binding;0.0326157789567213!GO:0006739;NADP metabolic process;0.032734991769229!GO:0006979;response to oxidative stress;0.0331429011826072!GO:0006376;mRNA splice site selection;0.0337406991877532!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0337406991877532!GO:0008097;5S rRNA binding;0.0347416031328051!GO:0030100;regulation of endocytosis;0.0352380384631948!GO:0030176;integral to endoplasmic reticulum membrane;0.0353063492707282!GO:0030832;regulation of actin filament length;0.0364517533128967!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0364517533128967!GO:0007030;Golgi organization and biogenesis;0.0365862412822054!GO:0031529;ruffle organization and biogenesis;0.0368629853956131!GO:0050662;coenzyme binding;0.0368629853956131!GO:0040008;regulation of growth;0.0374820883678283!GO:0042168;heme metabolic process;0.0374820883678283!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0377974154549853!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.038509923667039!GO:0043624;cellular protein complex disassembly;0.0387671334045447!GO:0005669;transcription factor TFIID complex;0.0390093669964676!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0392059708754819!GO:0004563;beta-N-acetylhexosaminidase activity;0.0392059708754819!GO:0033559;unsaturated fatty acid metabolic process;0.0392059708754819!GO:0006636;unsaturated fatty acid biosynthetic process;0.0392059708754819!GO:0048660;regulation of smooth muscle cell proliferation;0.0392059708754819!GO:0006007;glucose catabolic process;0.0392059708754819!GO:0005784;translocon complex;0.0392059708754819!GO:0031272;regulation of pseudopodium formation;0.0392059708754819!GO:0031269;pseudopodium formation;0.0392059708754819!GO:0031344;regulation of cell projection organization and biogenesis;0.0392059708754819!GO:0031268;pseudopodium organization and biogenesis;0.0392059708754819!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0392059708754819!GO:0031274;positive regulation of pseudopodium formation;0.0392059708754819!GO:0033367;protein localization in mast cell secretory granule;0.0392059708754819!GO:0033365;protein localization in organelle;0.0392059708754819!GO:0033371;T cell secretory granule organization and biogenesis;0.0392059708754819!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0392059708754819!GO:0033375;protease localization in T cell secretory granule;0.0392059708754819!GO:0042629;mast cell granule;0.0392059708754819!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0392059708754819!GO:0033364;mast cell secretory granule organization and biogenesis;0.0392059708754819!GO:0033380;granzyme B localization in T cell secretory granule;0.0392059708754819!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0392059708754819!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0392059708754819!GO:0033368;protease localization in mast cell secretory granule;0.0392059708754819!GO:0033366;protein localization in secretory granule;0.0392059708754819!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0392059708754819!GO:0033374;protein localization in T cell secretory granule;0.0392059708754819!GO:0000776;kinetochore;0.039660766886563!GO:0000075;cell cycle checkpoint;0.0397801711112061!GO:0008538;proteasome activator activity;0.0398678446330294!GO:0000082;G1/S transition of mitotic cell cycle;0.0401901641155587!GO:0003682;chromatin binding;0.0402959208959461!GO:0042158;lipoprotein biosynthetic process;0.0404756056988677!GO:0006417;regulation of translation;0.0404826880612683!GO:0009112;nucleobase metabolic process;0.04184815742788!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0425266104290628!GO:0010257;NADH dehydrogenase complex assembly;0.0425266104290628!GO:0033108;mitochondrial respiratory chain complex assembly;0.0425266104290628!GO:0003746;translation elongation factor activity;0.0429399496000017!GO:0047485;protein N-terminus binding;0.0452338537952047!GO:0030911;TPR domain binding;0.0455811687213931!GO:0043241;protein complex disassembly;0.0458962824456846!GO:0007044;cell-substrate junction assembly;0.0463832024571492!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0465686637298291!GO:0019902;phosphatase binding;0.0471500073927959!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0473660606281448!GO:0016584;nucleosome positioning;0.0478674373974195!GO:0045792;negative regulation of cell size;0.04845569746204!GO:0004003;ATP-dependent DNA helicase activity;0.0484680407502544!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.049082789989968!GO:0051098;regulation of binding;0.0491536482407004!GO:0000096;sulfur amino acid metabolic process;0.0497463796712686!GO:0006378;mRNA polyadenylation;0.0499558831238059 | |||
|sample_id=11236 | |sample_id=11236 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=lymph node | |sample_tissue=lymph node | ||
|top_motifs=PAX6:2.38550557923;FOX{I1,J2}:2.37046180724;HBP1_HMGB_SSRP1_UBTF:1.51055160885;SOX{8,9,10}:1.4988373984;SOX5:1.45437385465;POU3F1..4:1.43566230398;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.42409596625;NFATC1..3:1.41256291445;IKZF2:1.26900771707;RXR{A,B,G}:1.25276170866;SOX2:1.13172500729;FOXD3:1.06349926085;PITX1..3:1.04907016125;SREBF1,2:1.02921710459;bHLH_family:1.01051962155;ARID5B:0.972298310377;PAX1,9:0.923670101495;ELF1,2,4:0.905112756616;RBPJ:0.897182991662;FOXQ1:0.820307025697;FOXP1:0.791481245903;ZFP161:0.780901194183;TEF:0.760633105692;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.739951840721;TLX1..3_NFIC{dimer}:0.718357277507;ADNP_IRX_SIX_ZHX:0.718105062781;XCPE1{core}:0.695850696668;TP53:0.66003940495;AR:0.655604900545;POU1F1:0.632283860649;TFAP4:0.598135426608;ETS1,2:0.596435053177;ZBTB16:0.576543482022;GATA6:0.572054025987;LHX3,4:0.558291249219;PDX1:0.557655343124;LEF1_TCF7_TCF7L1,2:0.543742571262;NKX2-2,8:0.509438486482;FOXL1:0.460081056792;TEAD1:0.458279538705;ALX1:0.45505550797;SPIB:0.449490871008;SPZ1:0.448779190931;TAL1_TCF{3,4,12}:0.436059797801;NANOG:0.434766031652;NR3C1:0.369412992928;YY1:0.362895901575;HMGA1,2:0.344802286623;STAT1,3:0.332350221321;PAX5:0.320837774546;GCM1,2:0.308662515694;GFI1B:0.290293349758;GZF1:0.290218733791;IKZF1:0.278573000225;DMAP1_NCOR{1,2}_SMARC:0.274050064813;FOX{D1,D2}:0.254069338251;BPTF:0.239363817257;SMAD1..7,9:0.2353140503;TFDP1:0.230876854096;PAX4:0.220218684116;NRF1:0.217557687029;PAX8:0.207918441766;STAT2,4,6:0.193641484197;SP1:0.188917526091;SOX17:0.183861640462;ZIC1..3:0.165475471907;ONECUT1,2:0.156282241883;NFE2:0.145128441366;TFAP2{A,C}:0.122338247944;ZNF143:0.111955025168;NKX2-3_NKX2-5:0.111476864518;HAND1,2:0.109072194782;CDC5L:0.0887230858215;EGR1..3:0.0752454707326;PAX2:0.0750029841096;NR5A1,2:0.0667989557484;NFE2L2:0.0638136614918;MED-1{core}:0.0539724625599;TFAP2B:0.0490002308497;HIC1:0.0464659335051;NANOG{mouse}:0.0460697151197;MAZ:0.0407878117013;FOXA2:0.024290827022;SPI1:0.0206242912962;TGIF1:0.01441206281;UFEwm:0.00630827723837;MTE{core}:0.0021254491983;EN1,2:0.00196639420717;EVI1:0.000755885378541;HNF4A_NR2F1,2:-0.00703556699311;FOXO1,3,4:-0.0163630215116;ZBTB6:-0.0216760463957;BACH2:-0.0219945369604;AIRE:-0.0252199423823;PBX1:-0.0287219494199;IRF1,2:-0.031743594843;MYOD1:-0.0449467201857;CUX2:-0.0875113739614;FOXN1:-0.0898798835741;POU6F1:-0.096283192983;FOS_FOS{B,L1}_JUN{B,D}:-0.100828907312;TLX2:-0.109535474378;HOXA9_MEIS1:-0.117143681368;ATF2:-0.119755880794;PRDM1:-0.150607891137;FOX{F1,F2,J1}:-0.176455980157;FOSL2:-0.177242074863;MEF2{A,B,C,D}:-0.18573127585;REST:-0.197475076506;NFY{A,B,C}:-0.206226281343;NFKB1_REL_RELA:-0.208229865676;HES1:-0.208451046317;HNF1A:-0.212128804257;IRF7:-0.21541135754;CREB1:-0.233282533632;LMO2:-0.236145706778;XBP1:-0.238126419134;GTF2I:-0.240803858383;RORA:-0.248649252969;GATA4:-0.258136691896;PATZ1:-0.263830373409;PRRX1,2:-0.289511186416;NFIX:-0.297846972587;ATF6:-0.313879330795;TOPORS:-0.31422860327;PAX3,7:-0.316256618302;HOX{A6,A7,B6,B7}:-0.339875911843;CDX1,2,4:-0.34252871701;CRX:-0.357088675404;MYB:-0.357858054182;NKX6-1,2:-0.36336040442;E2F1..5:-0.367879344577;GFI1:-0.368934937694;RFX1:-0.37451744254;NHLH1,2:-0.380068159981;GTF2A1,2:-0.382452960483;SRF:-0.393527307592;HIF1A:-0.407855681152;EP300:-0.410883705831;ZNF148:-0.42589985875;STAT5{A,B}:-0.43250633211;MZF1:-0.450829265234;ZNF238:-0.475236597388;NR6A1:-0.486834625326;NKX3-2:-0.496652012905;HLF:-0.50849206764;T:-0.518544141653;AHR_ARNT_ARNT2:-0.522598849679;MTF1:-0.533097231239;NFE2L1:-0.537283174698;MYFfamily:-0.538917136061;CEBPA,B_DDIT3:-0.554791340659;PPARG:-0.582410191086;MYBL2:-0.582597085322;OCT4_SOX2{dimer}:-0.587889896618;FOXP3:-0.595839274369;RREB1:-0.622801534425;ELK1,4_GABP{A,B1}:-0.627124547108;FOXM1:-0.629408153362;DBP:-0.632163610039;SNAI1..3:-0.639122203234;GLI1..3:-0.654935656553;ESRRA:-0.686582479201;HOX{A5,B5}:-0.699058158481;KLF4:-0.70606756475;HSF1,2:-0.719744896156;TBP:-0.741054826551;RUNX1..3:-0.759542010309;RFX2..5_RFXANK_RFXAP:-0.759551248682;ZNF384:-0.761290530772;RXRA_VDR{dimer}:-0.763803330625;TFCP2:-0.765958837704;ZNF423:-0.778306703746;ZEB1:-0.856882075157;HOX{A4,D4}:-0.860251672863;NFIL3:-0.860265795901;JUN:-0.869931978164;ATF4:-0.871772885725;ATF5_CREB3:-0.878861785968;BREu{core}:-0.879693363415;HMX1:-0.880281012613;EBF1:-0.886363497718;POU5F1:-0.929337634314;ESR1:-0.945463254959;NKX2-1,4:-0.95855127754;ALX4:-1.02450179121;NR1H4:-1.07283461429;VSX1,2:-1.15029421814;NKX3-1:-1.22609301629;TBX4,5:-1.26213054632;MAFB:-1.31223118005;POU2F1..3:-1.40832455752 | |top_motifs=PAX6:2.38550557923;FOX{I1,J2}:2.37046180724;HBP1_HMGB_SSRP1_UBTF:1.51055160885;SOX{8,9,10}:1.4988373984;SOX5:1.45437385465;POU3F1..4:1.43566230398;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.42409596625;NFATC1..3:1.41256291445;IKZF2:1.26900771707;RXR{A,B,G}:1.25276170866;SOX2:1.13172500729;FOXD3:1.06349926085;PITX1..3:1.04907016125;SREBF1,2:1.02921710459;bHLH_family:1.01051962155;ARID5B:0.972298310377;PAX1,9:0.923670101495;ELF1,2,4:0.905112756616;RBPJ:0.897182991662;FOXQ1:0.820307025697;FOXP1:0.791481245903;ZFP161:0.780901194183;TEF:0.760633105692;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.739951840721;TLX1..3_NFIC{dimer}:0.718357277507;ADNP_IRX_SIX_ZHX:0.718105062781;XCPE1{core}:0.695850696668;TP53:0.66003940495;AR:0.655604900545;POU1F1:0.632283860649;TFAP4:0.598135426608;ETS1,2:0.596435053177;ZBTB16:0.576543482022;GATA6:0.572054025987;LHX3,4:0.558291249219;PDX1:0.557655343124;LEF1_TCF7_TCF7L1,2:0.543742571262;NKX2-2,8:0.509438486482;FOXL1:0.460081056792;TEAD1:0.458279538705;ALX1:0.45505550797;SPIB:0.449490871008;SPZ1:0.448779190931;TAL1_TCF{3,4,12}:0.436059797801;NANOG:0.434766031652;NR3C1:0.369412992928;YY1:0.362895901575;HMGA1,2:0.344802286623;STAT1,3:0.332350221321;PAX5:0.320837774546;GCM1,2:0.308662515694;GFI1B:0.290293349758;GZF1:0.290218733791;IKZF1:0.278573000225;DMAP1_NCOR{1,2}_SMARC:0.274050064813;FOX{D1,D2}:0.254069338251;BPTF:0.239363817257;SMAD1..7,9:0.2353140503;TFDP1:0.230876854096;PAX4:0.220218684116;NRF1:0.217557687029;PAX8:0.207918441766;STAT2,4,6:0.193641484197;SP1:0.188917526091;SOX17:0.183861640462;ZIC1..3:0.165475471907;ONECUT1,2:0.156282241883;NFE2:0.145128441366;TFAP2{A,C}:0.122338247944;ZNF143:0.111955025168;NKX2-3_NKX2-5:0.111476864518;HAND1,2:0.109072194782;CDC5L:0.0887230858215;EGR1..3:0.0752454707326;PAX2:0.0750029841096;NR5A1,2:0.0667989557484;NFE2L2:0.0638136614918;MED-1{core}:0.0539724625599;TFAP2B:0.0490002308497;HIC1:0.0464659335051;NANOG{mouse}:0.0460697151197;MAZ:0.0407878117013;FOXA2:0.024290827022;SPI1:0.0206242912962;TGIF1:0.01441206281;UFEwm:0.00630827723837;MTE{core}:0.0021254491983;EN1,2:0.00196639420717;EVI1:0.000755885378541;HNF4A_NR2F1,2:-0.00703556699311;FOXO1,3,4:-0.0163630215116;ZBTB6:-0.0216760463957;BACH2:-0.0219945369604;AIRE:-0.0252199423823;PBX1:-0.0287219494199;IRF1,2:-0.031743594843;MYOD1:-0.0449467201857;CUX2:-0.0875113739614;FOXN1:-0.0898798835741;POU6F1:-0.096283192983;FOS_FOS{B,L1}_JUN{B,D}:-0.100828907312;TLX2:-0.109535474378;HOXA9_MEIS1:-0.117143681368;ATF2:-0.119755880794;PRDM1:-0.150607891137;FOX{F1,F2,J1}:-0.176455980157;FOSL2:-0.177242074863;MEF2{A,B,C,D}:-0.18573127585;REST:-0.197475076506;NFY{A,B,C}:-0.206226281343;NFKB1_REL_RELA:-0.208229865676;HES1:-0.208451046317;HNF1A:-0.212128804257;IRF7:-0.21541135754;CREB1:-0.233282533632;LMO2:-0.236145706778;XBP1:-0.238126419134;GTF2I:-0.240803858383;RORA:-0.248649252969;GATA4:-0.258136691896;PATZ1:-0.263830373409;PRRX1,2:-0.289511186416;NFIX:-0.297846972587;ATF6:-0.313879330795;TOPORS:-0.31422860327;PAX3,7:-0.316256618302;HOX{A6,A7,B6,B7}:-0.339875911843;CDX1,2,4:-0.34252871701;CRX:-0.357088675404;MYB:-0.357858054182;NKX6-1,2:-0.36336040442;E2F1..5:-0.367879344577;GFI1:-0.368934937694;RFX1:-0.37451744254;NHLH1,2:-0.380068159981;GTF2A1,2:-0.382452960483;SRF:-0.393527307592;HIF1A:-0.407855681152;EP300:-0.410883705831;ZNF148:-0.42589985875;STAT5{A,B}:-0.43250633211;MZF1:-0.450829265234;ZNF238:-0.475236597388;NR6A1:-0.486834625326;NKX3-2:-0.496652012905;HLF:-0.50849206764;T:-0.518544141653;AHR_ARNT_ARNT2:-0.522598849679;MTF1:-0.533097231239;NFE2L1:-0.537283174698;MYFfamily:-0.538917136061;CEBPA,B_DDIT3:-0.554791340659;PPARG:-0.582410191086;MYBL2:-0.582597085322;OCT4_SOX2{dimer}:-0.587889896618;FOXP3:-0.595839274369;RREB1:-0.622801534425;ELK1,4_GABP{A,B1}:-0.627124547108;FOXM1:-0.629408153362;DBP:-0.632163610039;SNAI1..3:-0.639122203234;GLI1..3:-0.654935656553;ESRRA:-0.686582479201;HOX{A5,B5}:-0.699058158481;KLF4:-0.70606756475;HSF1,2:-0.719744896156;TBP:-0.741054826551;RUNX1..3:-0.759542010309;RFX2..5_RFXANK_RFXAP:-0.759551248682;ZNF384:-0.761290530772;RXRA_VDR{dimer}:-0.763803330625;TFCP2:-0.765958837704;ZNF423:-0.778306703746;ZEB1:-0.856882075157;HOX{A4,D4}:-0.860251672863;NFIL3:-0.860265795901;JUN:-0.869931978164;ATF4:-0.871772885725;ATF5_CREB3:-0.878861785968;BREu{core}:-0.879693363415;HMX1:-0.880281012613;EBF1:-0.886363497718;POU5F1:-0.929337634314;ESR1:-0.945463254959;NKX2-1,4:-0.95855127754;ALX4:-1.02450179121;NR1H4:-1.07283461429;VSX1,2:-1.15029421814;NKX3-1:-1.22609301629;TBX4,5:-1.26213054632;MAFB:-1.31223118005;POU2F1..3:-1.40832455752 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11236-116D3;search_select_hide=table117:FF:11236-116D3 | |||
}} | }} | ||
Latest revision as of 16:26, 3 June 2020
| Name: | Endothelial Cells - Lymphatic, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10865 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10865
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10865
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.35 |
| 10 | 10 | 0.919 |
| 100 | 100 | 0.217 |
| 101 | 101 | 0.945 |
| 102 | 102 | 0.622 |
| 103 | 103 | 0.554 |
| 104 | 104 | 0.518 |
| 105 | 105 | 0.19 |
| 106 | 106 | 0.18 |
| 107 | 107 | 0.729 |
| 108 | 108 | 0.755 |
| 109 | 109 | 0.762 |
| 11 | 11 | 0.797 |
| 110 | 110 | 0.215 |
| 111 | 111 | 0.357 |
| 112 | 112 | 0.866 |
| 113 | 113 | 0.959 |
| 114 | 114 | 0.52 |
| 115 | 115 | 0.134 |
| 116 | 116 | 0.463 |
| 117 | 117 | 0.598 |
| 118 | 118 | 0.531 |
| 119 | 119 | 0.335 |
| 12 | 12 | 0.46 |
| 120 | 120 | 0.156 |
| 121 | 121 | 0.568 |
| 122 | 122 | 0.452 |
| 123 | 123 | 0.334 |
| 124 | 124 | 0.0458 |
| 125 | 125 | 0.846 |
| 126 | 126 | 0.824 |
| 127 | 127 | 0.077 |
| 128 | 128 | 0.667 |
| 129 | 129 | 0.276 |
| 13 | 13 | 0.353 |
| 130 | 130 | 0.388 |
| 131 | 131 | 0.567 |
| 132 | 132 | 0.25 |
| 133 | 133 | 0.905 |
| 134 | 134 | 0.42 |
| 135 | 135 | 0.539 |
| 136 | 136 | 0.128 |
| 137 | 137 | 0.293 |
| 138 | 138 | 0.279 |
| 139 | 139 | 0.323 |
| 14 | 14 | 0.892 |
| 140 | 140 | 0.353 |
| 141 | 141 | 0.644 |
| 142 | 142 | 3.63791e-4 |
| 143 | 143 | 0.68 |
| 144 | 144 | 0.852 |
| 145 | 145 | 0.019 |
| 146 | 146 | 0.445 |
| 147 | 147 | 0.53 |
| 148 | 148 | 0.0791 |
| 149 | 149 | 0.526 |
| 15 | 15 | 0.602 |
| 150 | 150 | 0.62 |
| 151 | 151 | 0.985 |
| 152 | 152 | 0.207 |
| 153 | 153 | 0.491 |
| 154 | 154 | 0.937 |
| 155 | 155 | 0.401 |
| 156 | 156 | 0.211 |
| 157 | 157 | 0.768 |
| 158 | 158 | 0.238 |
| 159 | 159 | 0.118 |
| 16 | 16 | 0.396 |
| 160 | 160 | 0.55 |
| 161 | 161 | 0.0328 |
| 162 | 162 | 0.537 |
| 163 | 163 | 0.846 |
| 164 | 164 | 0.201 |
| 165 | 165 | 0.695 |
| 166 | 166 | 0.37 |
| 167 | 167 | 0.734 |
| 168 | 168 | 0.921 |
| 169 | 169 | 0.569 |
| 17 | 17 | 0.68 |
| 18 | 18 | 0.0662 |
| 19 | 19 | 0.354 |
| 2 | 2 | 0.173 |
| 20 | 20 | 0.021 |
| 21 | 21 | 0.267 |
| 22 | 22 | 0.79 |
| 23 | 23 | 0.609 |
| 24 | 24 | 0.555 |
| 25 | 25 | 0.11 |
| 26 | 26 | 0.437 |
| 27 | 27 | 0.196 |
| 28 | 28 | 0.535 |
| 29 | 29 | 0.816 |
| 3 | 3 | 0.469 |
| 30 | 30 | 0.0422 |
| 31 | 31 | 0.409 |
| 32 | 32 | 0.146 |
| 33 | 33 | 0.618 |
| 34 | 34 | 0.746 |
| 35 | 35 | 0.274 |
| 36 | 36 | 0.0722 |
| 37 | 37 | 0.229 |
| 38 | 38 | 0.458 |
| 39 | 39 | 0.059 |
| 4 | 4 | 0.0201 |
| 40 | 40 | 0.313 |
| 41 | 41 | 0.272 |
| 42 | 42 | 0.594 |
| 43 | 43 | 0.3 |
| 44 | 44 | 0.672 |
| 45 | 45 | 0.929 |
| 46 | 46 | 0.652 |
| 47 | 47 | 0.984 |
| 48 | 48 | 0.411 |
| 49 | 49 | 0.466 |
| 5 | 5 | 0.798 |
| 50 | 50 | 0.72 |
| 51 | 51 | 0.784 |
| 52 | 52 | 0.272 |
| 53 | 53 | 0.992 |
| 54 | 54 | 0.843 |
| 55 | 55 | 0.363 |
| 56 | 56 | 0.692 |
| 57 | 57 | 0.22 |
| 58 | 58 | 0.0109 |
| 59 | 59 | 0.248 |
| 6 | 6 | 0.564 |
| 60 | 60 | 0.0596 |
| 61 | 61 | 0.913 |
| 62 | 62 | 0.0254 |
| 63 | 63 | 0.751 |
| 64 | 64 | 0.262 |
| 65 | 65 | 0.607 |
| 66 | 66 | 0.85 |
| 67 | 67 | 0.668 |
| 68 | 68 | 0.332 |
| 69 | 69 | 0.674 |
| 7 | 7 | 0.413 |
| 70 | 70 | 0.299 |
| 71 | 71 | 0.366 |
| 72 | 72 | 0.961 |
| 73 | 73 | 0.0195 |
| 74 | 74 | 0.786 |
| 75 | 75 | 0.382 |
| 76 | 76 | 0.251 |
| 77 | 77 | 0.42 |
| 78 | 78 | 0.35 |
| 79 | 79 | 0.642 |
| 8 | 8 | 0.218 |
| 80 | 80 | 0.209 |
| 81 | 81 | 0.412 |
| 82 | 82 | 0.901 |
| 83 | 83 | 0.932 |
| 84 | 84 | 0.636 |
| 85 | 85 | 0.593 |
| 86 | 86 | 0.937 |
| 87 | 87 | 0.956 |
| 88 | 88 | 0.239 |
| 89 | 89 | 0.25 |
| 9 | 9 | 0.12 |
| 90 | 90 | 0.0805 |
| 91 | 91 | 0.495 |
| 92 | 92 | 0.121 |
| 93 | 93 | 0.168 |
| 94 | 94 | 0.362 |
| 95 | 95 | 0.358 |
| 96 | 96 | 0.693 |
| 97 | 97 | 0.347 |
| 98 | 98 | 0.498 |
| 99 | 99 | 0.22 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10865
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000049 human lymphatic endothelial cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0002138 (endothelial cell of lymphatic vessel)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000055 (vessel)
0004111 (anatomical conduit)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002049 (vasculature)
0007798 (vascular system)
0001473 (lymphatic vessel)
0002465 (lymphoid system)
0004535 (cardiovascular system)
0004536 (lymph vasculature)
0006558 (lymphatic part of lymphoid system)
0002193 (hemolymphoid system)
0002405 (immune system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000001 (sample)
0000049 (human lymphatic endothelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)
CL:0005022 (vascular lymphangioblast)
