FF:11257-116F6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005720 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005720 | ||
|accession_numbers=CAGE;DRX008495;DRR009367;DRZ000792;DRZ002177;DRZ012142;DRZ013527 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037005;DRR041371;DRZ007013 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002367,UBERON:0005156,UBERON:0004119,UBERON:0000062,UBERON:0004120,UBERON:0000077,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002530,UBERON:0010147,UBERON:0010317,UBERON:0003937,UBERON:0005399,UBERON:0003101,UBERON:0000079 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0000393,CL:0000183,CL:0000187,CL:0000192,CL:0000211,CL:0000255,CL:1000487 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000167,FF:0000183 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Smooth%2520Muscle%2520Cells%2520-%2520Prostate%252c%2520donor1.CNhs11920.11257-116F6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Smooth%2520Muscle%2520Cells%2520-%2520Prostate%252c%2520donor1.CNhs11920.11257-116F6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Smooth%2520Muscle%2520Cells%2520-%2520Prostate%252c%2520donor1.CNhs11920.11257-116F6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Smooth%2520Muscle%2520Cells%2520-%2520Prostate%252c%2520donor1.CNhs11920.11257-116F6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Smooth%2520Muscle%2520Cells%2520-%2520Prostate%252c%2520donor1.CNhs11920.11257-116F6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11257-116F6 | |id=FF:11257-116F6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000183 | ||
|is_obsolete= | |||
|library_id=CNhs11920 | |||
|library_id_phase_based=2:CNhs11920 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11257 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10002.GTCCGC.11257 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11257 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10002.GTCCGC.11257 | |||
|name=Smooth Muscle Cells - Prostate, donor1 | |name=Smooth Muscle Cells - Prostate, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11920,LSID842,release011,COMPLETED | |profile_hcage=CNhs11920,LSID842,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10002,,, | |profile_srnaseq=SRhi10002,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=116 | |rna_box=116 | ||
|rna_catalog_number=N/A | |rna_catalog_number=N/A | ||
| Line 56: | Line 82: | ||
|rna_tube_id=116F6 | |rna_tube_id=116F6 | ||
|rna_weight_ug=53 | |rna_weight_ug=53 | ||
|rnaseq_library_id=SRhi10002.GTCCGC | |||
|sample_age=40 | |sample_age=40 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=CC-2587 | |sample_cell_catalog=CC-2587 | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.40004939758011e-231!GO:0005737;cytoplasm;2.44989985291761e-185!GO:0043226;organelle;2.91027139044574e-184!GO:0043229;intracellular organelle;7.12784254483762e-184!GO:0043231;intracellular membrane-bound organelle;4.98693244103866e-181!GO:0043227;membrane-bound organelle;8.81478873814385e-181!GO:0044422;organelle part;3.54254705750051e-142!GO:0044446;intracellular organelle part;1.49972175360321e-140!GO:0044444;cytoplasmic part;9.00234618221043e-138!GO:0032991;macromolecular complex;1.43709565886319e-96!GO:0030529;ribonucleoprotein complex;2.04487555606275e-82!GO:0044238;primary metabolic process;1.63598265340506e-81!GO:0044237;cellular metabolic process;3.40559233110631e-80!GO:0043170;macromolecule metabolic process;2.33148595019008e-76!GO:0005515;protein binding;6.38334221811811e-76!GO:0005634;nucleus;8.84580623130982e-67!GO:0044428;nuclear part;3.53705736910443e-66!GO:0043233;organelle lumen;4.47605047259947e-66!GO:0031974;membrane-enclosed lumen;4.47605047259947e-66!GO:0003723;RNA binding;5.66783451167693e-66!GO:0005739;mitochondrion;2.01530303084157e-60!GO:0016043;cellular component organization and biogenesis;3.58771022913209e-51!GO:0019538;protein metabolic process;4.9700367346494e-51!GO:0031090;organelle membrane;7.41219881922972e-50!GO:0005840;ribosome;7.99057698835638e-50!GO:0043234;protein complex;6.21352749605956e-49!GO:0006412;translation;1.17172084486508e-47!GO:0015031;protein transport;1.58686460593968e-45!GO:0033036;macromolecule localization;8.01051919046784e-45!GO:0044260;cellular macromolecule metabolic process;1.17236073058088e-44!GO:0006396;RNA processing;1.24363546519786e-44!GO:0003735;structural constituent of ribosome;1.24363546519786e-44!GO:0044267;cellular protein metabolic process;4.71522282543095e-44!GO:0045184;establishment of protein localization;1.01165611536399e-41!GO:0008104;protein localization;1.97534016337845e-41!GO:0044429;mitochondrial part;5.04767894218432e-41!GO:0005829;cytosol;1.46377355074637e-39!GO:0033279;ribosomal subunit;4.46916430282739e-39!GO:0009058;biosynthetic process;6.76345054189328e-39!GO:0043283;biopolymer metabolic process;1.06910783285649e-38!GO:0031981;nuclear lumen;1.46511805522285e-38!GO:0031967;organelle envelope;3.33962366892708e-38!GO:0031975;envelope;8.26074391736459e-38!GO:0046907;intracellular transport;3.0223238222796e-37!GO:0009059;macromolecule biosynthetic process;4.28917983571688e-37!GO:0044249;cellular biosynthetic process;2.09572153124213e-36!GO:0016071;mRNA metabolic process;2.91509911997059e-36!GO:0010467;gene expression;3.05815417694126e-35!GO:0008380;RNA splicing;1.70279567178505e-34!GO:0006996;organelle organization and biogenesis;7.65291856046465e-34!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.57882963714178e-33!GO:0043228;non-membrane-bound organelle;1.2100677051888e-32!GO:0043232;intracellular non-membrane-bound organelle;1.2100677051888e-32!GO:0006397;mRNA processing;3.55471939137012e-32!GO:0065003;macromolecular complex assembly;4.17243150973072e-32!GO:0022607;cellular component assembly;4.04879791938356e-30!GO:0006886;intracellular protein transport;7.0853767493484e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.26991727164079e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.9775424111004e-28!GO:0005740;mitochondrial envelope;1.05791381535737e-26!GO:0006259;DNA metabolic process;2.91922548328292e-25!GO:0031966;mitochondrial membrane;3.32694336299044e-25!GO:0019866;organelle inner membrane;7.82989625461181e-25!GO:0044445;cytosolic part;1.48944018096621e-24!GO:0005654;nucleoplasm;1.583492511584e-24!GO:0005681;spliceosome;3.03328509363923e-24!GO:0007049;cell cycle;3.46838077398257e-24!GO:0051649;establishment of cellular localization;5.02598317377474e-24!GO:0051641;cellular localization;9.69790874325512e-24!GO:0005743;mitochondrial inner membrane;2.46178668473387e-23!GO:0006119;oxidative phosphorylation;1.65737476786577e-22!GO:0005783;endoplasmic reticulum;4.87668833513617e-22!GO:0012505;endomembrane system;1.03368893955425e-21!GO:0006457;protein folding;2.64955035015652e-21!GO:0000166;nucleotide binding;2.01722774896513e-20!GO:0016462;pyrophosphatase activity;2.64865782954389e-20!GO:0015934;large ribosomal subunit;3.03157004195531e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.04618363877767e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;4.68913137238883e-20!GO:0015935;small ribosomal subunit;7.95205422520393e-20!GO:0017111;nucleoside-triphosphatase activity;8.00162021837852e-20!GO:0044455;mitochondrial membrane part;8.96043261453512e-20!GO:0044451;nucleoplasm part;1.07268664820778e-19!GO:0048770;pigment granule;1.96704695233548e-19!GO:0042470;melanosome;1.96704695233548e-19!GO:0003676;nucleic acid binding;6.50108679385727e-19!GO:0022402;cell cycle process;2.4928945991082e-18!GO:0044432;endoplasmic reticulum part;4.52647867726975e-18!GO:0022618;protein-RNA complex assembly;6.88713449428723e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;2.78543699749516e-17!GO:0000502;proteasome complex (sensu Eukaryota);3.87629056214974e-17!GO:0005794;Golgi apparatus;4.83681351381652e-17!GO:0019941;modification-dependent protein catabolic process;6.02880079273413e-17!GO:0043632;modification-dependent macromolecule catabolic process;6.02880079273413e-17!GO:0006511;ubiquitin-dependent protein catabolic process;7.01747812607486e-17!GO:0031980;mitochondrial lumen;8.73619167280878e-17!GO:0005759;mitochondrial matrix;8.73619167280878e-17!GO:0044257;cellular protein catabolic process;8.88380633884604e-17!GO:0005746;mitochondrial respiratory chain;9.57048662637814e-17!GO:0043285;biopolymer catabolic process;1.2198319518449e-16!GO:0006512;ubiquitin cycle;1.45288044055364e-16!GO:0000278;mitotic cell cycle;1.62953656842475e-16!GO:0016874;ligase activity;2.21685188899638e-16!GO:0048193;Golgi vesicle transport;6.75569402759948e-16!GO:0051186;cofactor metabolic process;7.88969859420129e-16!GO:0044265;cellular macromolecule catabolic process;8.14936146442239e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.19410077196656e-15!GO:0008135;translation factor activity, nucleic acid binding;1.63085505448808e-15!GO:0030163;protein catabolic process;1.94715276196965e-15!GO:0006974;response to DNA damage stimulus;4.02210636739835e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.31738155656629e-15!GO:0009057;macromolecule catabolic process;8.11944190937879e-15!GO:0050136;NADH dehydrogenase (quinone) activity;1.31233472237934e-14!GO:0003954;NADH dehydrogenase activity;1.31233472237934e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.31233472237934e-14!GO:0006605;protein targeting;1.85571331052511e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.41683131349398e-14!GO:0005730;nucleolus;2.61438057079224e-14!GO:0008134;transcription factor binding;2.86460289015638e-14!GO:0032553;ribonucleotide binding;3.51395335605072e-14!GO:0032555;purine ribonucleotide binding;3.51395335605072e-14!GO:0005761;mitochondrial ribosome;3.95773407216334e-14!GO:0000313;organellar ribosome;3.95773407216334e-14!GO:0051082;unfolded protein binding;6.80510085489813e-14!GO:0005694;chromosome;7.66689517071329e-14!GO:0017076;purine nucleotide binding;1.08800344861562e-13!GO:0016070;RNA metabolic process;1.32300162603306e-13!GO:0042775;organelle ATP synthesis coupled electron transport;3.65308472448122e-13!GO:0042773;ATP synthesis coupled electron transport;3.65308472448122e-13!GO:0044248;cellular catabolic process;3.87511872136905e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.58165104628004e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;5.21935819715148e-13!GO:0000375;RNA splicing, via transesterification reactions;5.21935819715148e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.21935819715148e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.73800125598894e-13!GO:0030964;NADH dehydrogenase complex (quinone);8.2772932911626e-13!GO:0045271;respiratory chain complex I;8.2772932911626e-13!GO:0005747;mitochondrial respiratory chain complex I;8.2772932911626e-13!GO:0006732;coenzyme metabolic process;8.33563772094684e-13!GO:0016192;vesicle-mediated transport;8.82528181415687e-13!GO:0000087;M phase of mitotic cell cycle;9.3425681472705e-13!GO:0044427;chromosomal part;1.05669780259983e-12!GO:0007067;mitosis;1.8017544318798e-12!GO:0005793;ER-Golgi intermediate compartment;1.8618736533805e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.926003372946e-12!GO:0005789;endoplasmic reticulum membrane;2.59534252752178e-12!GO:0022403;cell cycle phase;3.22176686879186e-12!GO:0005635;nuclear envelope;3.26908360405552e-12!GO:0003743;translation initiation factor activity;3.99042296931616e-12!GO:0006281;DNA repair;4.04448425818538e-12!GO:0051301;cell division;5.00803963752533e-12!GO:0006413;translational initiation;1.08867369352706e-11!GO:0009055;electron carrier activity;1.47634793260806e-11!GO:0051276;chromosome organization and biogenesis;1.71711541513336e-11!GO:0005524;ATP binding;4.66389886162506e-11!GO:0031965;nuclear membrane;5.3559990554578e-11!GO:0032559;adenyl ribonucleotide binding;5.42805416747486e-11!GO:0009719;response to endogenous stimulus;7.25594053717947e-11!GO:0042254;ribosome biogenesis and assembly;8.55672711739565e-11!GO:0043412;biopolymer modification;9.63116194599517e-11!GO:0000074;regulation of progression through cell cycle;1.08536725803926e-10!GO:0051726;regulation of cell cycle;1.21438537697097e-10!GO:0016604;nuclear body;1.62889434667828e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.86215847349306e-10!GO:0030554;adenyl nucleotide binding;2.1743502088559e-10!GO:0016887;ATPase activity;3.06327933938991e-10!GO:0009259;ribonucleotide metabolic process;4.07502431310166e-10!GO:0042623;ATPase activity, coupled;4.28694658488252e-10!GO:0044453;nuclear membrane part;4.42292551995274e-10!GO:0000279;M phase;4.82152462222213e-10!GO:0006446;regulation of translational initiation;5.19517131555931e-10!GO:0008565;protein transporter activity;5.55844855192829e-10!GO:0006163;purine nucleotide metabolic process;7.99886528196422e-10!GO:0006464;protein modification process;8.26113999449153e-10!GO:0006913;nucleocytoplasmic transport;8.86597233967893e-10!GO:0006260;DNA replication;9.94488163393726e-10!GO:0012501;programmed cell death;1.09215154762818e-09!GO:0003712;transcription cofactor activity;1.16033803651196e-09!GO:0009150;purine ribonucleotide metabolic process;1.2145396738958e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.71314460997684e-09!GO:0051169;nuclear transport;1.89046360400052e-09!GO:0006915;apoptosis;2.09097143342068e-09!GO:0006888;ER to Golgi vesicle-mediated transport;2.3383034184376e-09!GO:0015630;microtubule cytoskeleton;2.42546305984651e-09!GO:0006461;protein complex assembly;2.48851769048361e-09!GO:0019787;small conjugating protein ligase activity;2.69397388248509e-09!GO:0008639;small protein conjugating enzyme activity;3.08154264994159e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.12157406023096e-09!GO:0006164;purine nucleotide biosynthetic process;3.75332415577049e-09!GO:0009199;ribonucleoside triphosphate metabolic process;4.3289842370787e-09!GO:0009141;nucleoside triphosphate metabolic process;4.63065979751964e-09!GO:0048523;negative regulation of cellular process;4.85238848360106e-09!GO:0006323;DNA packaging;5.00160846521967e-09!GO:0009152;purine ribonucleotide biosynthetic process;5.56056563688406e-09!GO:0004842;ubiquitin-protein ligase activity;5.56703951226352e-09!GO:0009260;ribonucleotide biosynthetic process;5.9565684505617e-09!GO:0009060;aerobic respiration;6.49885512984431e-09!GO:0004386;helicase activity;6.71308048089077e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.71515761558748e-09!GO:0009144;purine nucleoside triphosphate metabolic process;6.71515761558748e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.75162872813212e-09!GO:0006399;tRNA metabolic process;7.61443116158436e-09!GO:0015986;ATP synthesis coupled proton transport;1.18294933522696e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.18294933522696e-08!GO:0008219;cell death;1.31475043850476e-08!GO:0016265;death;1.31475043850476e-08!GO:0016607;nuclear speck;1.44891281820547e-08!GO:0065002;intracellular protein transport across a membrane;1.53781439414614e-08!GO:0005788;endoplasmic reticulum lumen;1.6167126005328e-08!GO:0043687;post-translational protein modification;2.00185761875879e-08!GO:0065004;protein-DNA complex assembly;2.0981107517515e-08!GO:0009142;nucleoside triphosphate biosynthetic process;2.27471234118118e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.27471234118118e-08!GO:0045333;cellular respiration;2.36435644558811e-08!GO:0008026;ATP-dependent helicase activity;2.71249450110553e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.73513867630026e-08!GO:0030120;vesicle coat;3.15564490589788e-08!GO:0030662;coated vesicle membrane;3.15564490589788e-08!GO:0016881;acid-amino acid ligase activity;3.39271244566207e-08!GO:0019829;cation-transporting ATPase activity;3.47691184020983e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.57174838757442e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.57174838757442e-08!GO:0051188;cofactor biosynthetic process;3.94321652313513e-08!GO:0005643;nuclear pore;4.3532148054522e-08!GO:0046034;ATP metabolic process;5.05473329097689e-08!GO:0009056;catabolic process;5.75580297330145e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;6.03555525366293e-08!GO:0004812;aminoacyl-tRNA ligase activity;6.03555525366293e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;6.03555525366293e-08!GO:0003924;GTPase activity;7.39336873717998e-08!GO:0043038;amino acid activation;7.80598091590461e-08!GO:0006418;tRNA aminoacylation for protein translation;7.80598091590461e-08!GO:0043039;tRNA aminoacylation;7.80598091590461e-08!GO:0000785;chromatin;8.99863078692687e-08!GO:0050794;regulation of cellular process;9.64615136232946e-08!GO:0006333;chromatin assembly or disassembly;9.64615136232946e-08!GO:0051246;regulation of protein metabolic process;1.08494231657351e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.11987417369507e-07!GO:0006099;tricarboxylic acid cycle;1.43804549695615e-07!GO:0046356;acetyl-CoA catabolic process;1.43804549695615e-07!GO:0044431;Golgi apparatus part;1.53948671696593e-07!GO:0005768;endosome;1.60089394638435e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.61201883153942e-07!GO:0006366;transcription from RNA polymerase II promoter;1.63610977949697e-07!GO:0048475;coated membrane;1.70301262098456e-07!GO:0030117;membrane coat;1.70301262098456e-07!GO:0017038;protein import;1.89004001253695e-07!GO:0048519;negative regulation of biological process;2.03642374983303e-07!GO:0006754;ATP biosynthetic process;2.3208752989859e-07!GO:0006753;nucleoside phosphate metabolic process;2.3208752989859e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.37319143171822e-07!GO:0031988;membrane-bound vesicle;2.66552469791165e-07!GO:0009109;coenzyme catabolic process;2.82525340350075e-07!GO:0050657;nucleic acid transport;2.98698346749885e-07!GO:0051236;establishment of RNA localization;2.98698346749885e-07!GO:0050658;RNA transport;2.98698346749885e-07!GO:0016023;cytoplasmic membrane-bound vesicle;2.99285449120779e-07!GO:0016469;proton-transporting two-sector ATPase complex;3.20864574384009e-07!GO:0006403;RNA localization;3.27957643534538e-07!GO:0003697;single-stranded DNA binding;3.61463724927635e-07!GO:0051187;cofactor catabolic process;4.84337072689134e-07!GO:0046930;pore complex;5.65913603388356e-07!GO:0009117;nucleotide metabolic process;5.66661185123587e-07!GO:0043069;negative regulation of programmed cell death;5.77944313857543e-07!GO:0006084;acetyl-CoA metabolic process;6.24641459311437e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.38295471680751e-07!GO:0016491;oxidoreductase activity;6.40901487659212e-07!GO:0007005;mitochondrion organization and biogenesis;7.51879942907012e-07!GO:0043067;regulation of programmed cell death;7.69474552885358e-07!GO:0005813;centrosome;8.04993097150376e-07!GO:0043566;structure-specific DNA binding;8.42840790708774e-07!GO:0042981;regulation of apoptosis;9.3775694886341e-07!GO:0006364;rRNA processing;9.71940594072434e-07!GO:0009108;coenzyme biosynthetic process;1.06956502457285e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.25287923576103e-06!GO:0043066;negative regulation of apoptosis;1.38309103073498e-06!GO:0004298;threonine endopeptidase activity;1.56853900979311e-06!GO:0031982;vesicle;1.86877827823912e-06!GO:0016072;rRNA metabolic process;1.87497310908416e-06!GO:0045259;proton-transporting ATP synthase complex;1.98261054120232e-06!GO:0005815;microtubule organizing center;1.99818921308601e-06!GO:0031410;cytoplasmic vesicle;2.38056403468208e-06!GO:0006334;nucleosome assembly;2.50743150265291e-06!GO:0032446;protein modification by small protein conjugation;2.62053594528943e-06!GO:0006916;anti-apoptosis;2.69749380801101e-06!GO:0006752;group transfer coenzyme metabolic process;2.79440608459371e-06!GO:0006613;cotranslational protein targeting to membrane;3.01758625444654e-06!GO:0016787;hydrolase activity;3.01758625444654e-06!GO:0005798;Golgi-associated vesicle;3.09430446656991e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.32270408105175e-06!GO:0005819;spindle;3.43551545268616e-06!GO:0000151;ubiquitin ligase complex;3.4671283582445e-06!GO:0008654;phospholipid biosynthetic process;3.5917044109935e-06!GO:0045786;negative regulation of progression through cell cycle;3.68126489545963e-06!GO:0000245;spliceosome assembly;3.81121181994316e-06!GO:0031252;leading edge;3.98076286020892e-06!GO:0016567;protein ubiquitination;4.21021723706852e-06!GO:0005773;vacuole;4.76533580788479e-06!GO:0005667;transcription factor complex;5.11648538978885e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;5.63375457444041e-06!GO:0016853;isomerase activity;6.65139510130169e-06!GO:0051028;mRNA transport;6.7992033402899e-06!GO:0045454;cell redox homeostasis;7.16513114789027e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;7.36151166537522e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.24040260562891e-06!GO:0031497;chromatin assembly;8.39718503234444e-06!GO:0016859;cis-trans isomerase activity;8.82918970787465e-06!GO:0005770;late endosome;9.1455087490804e-06!GO:0000139;Golgi membrane;1.26121148950582e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.4425563552551e-05!GO:0007010;cytoskeleton organization and biogenesis;1.53854390458159e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.54527545726681e-05!GO:0050789;regulation of biological process;1.56713523791277e-05!GO:0051170;nuclear import;1.58452514949265e-05!GO:0044440;endosomal part;1.59893001800635e-05!GO:0010008;endosome membrane;1.59893001800635e-05!GO:0005525;GTP binding;1.61304275432685e-05!GO:0016779;nucleotidyltransferase activity;1.66255586301081e-05!GO:0005762;mitochondrial large ribosomal subunit;1.72990771680458e-05!GO:0000315;organellar large ribosomal subunit;1.72990771680458e-05!GO:0043623;cellular protein complex assembly;2.17787118687294e-05!GO:0006612;protein targeting to membrane;2.94746724716759e-05!GO:0030867;rough endoplasmic reticulum membrane;3.29953380727123e-05!GO:0003713;transcription coactivator activity;3.34786929969427e-05!GO:0006606;protein import into nucleus;3.34786929969427e-05!GO:0016568;chromatin modification;3.42110798714258e-05!GO:0000323;lytic vacuole;3.55034309088223e-05!GO:0005764;lysosome;3.55034309088223e-05!GO:0007051;spindle organization and biogenesis;3.65753137797384e-05!GO:0008361;regulation of cell size;4.58799259095593e-05!GO:0016049;cell growth;5.74581290951387e-05!GO:0031324;negative regulation of cellular metabolic process;6.2367301672121e-05!GO:0019843;rRNA binding;7.11010337899517e-05!GO:0006091;generation of precursor metabolites and energy;7.47795081265267e-05!GO:0043021;ribonucleoprotein binding;7.75624700398505e-05!GO:0032561;guanyl ribonucleotide binding;8.4278911629841e-05!GO:0019001;guanyl nucleotide binding;8.4278911629841e-05!GO:0015980;energy derivation by oxidation of organic compounds;9.20760273024214e-05!GO:0003899;DNA-directed RNA polymerase activity;9.39858093859377e-05!GO:0003724;RNA helicase activity;9.69583893209975e-05!GO:0005791;rough endoplasmic reticulum;0.000100057934567671!GO:0051329;interphase of mitotic cell cycle;0.000111764194664213!GO:0030133;transport vesicle;0.000112602030275807!GO:0003714;transcription corepressor activity;0.000113889822756392!GO:0033116;ER-Golgi intermediate compartment membrane;0.000129488609795019!GO:0051789;response to protein stimulus;0.000137516483696722!GO:0006986;response to unfolded protein;0.000137516483696722!GO:0030663;COPI coated vesicle membrane;0.000159790904701934!GO:0030126;COPI vesicle coat;0.000159790904701934!GO:0031968;organelle outer membrane;0.000160894644714659!GO:0019867;outer membrane;0.000167061163274915!GO:0016563;transcription activator activity;0.000167470568270776!GO:0000775;chromosome, pericentric region;0.000167970388718826!GO:0006793;phosphorus metabolic process;0.000182115986328171!GO:0006796;phosphate metabolic process;0.000182115986328171!GO:0006414;translational elongation;0.000196062912381427!GO:0000314;organellar small ribosomal subunit;0.000219402296053781!GO:0005763;mitochondrial small ribosomal subunit;0.000219402296053781!GO:0006261;DNA-dependent DNA replication;0.000250680518132529!GO:0016310;phosphorylation;0.000282026896485774!GO:0001558;regulation of cell growth;0.000282054160431531!GO:0030036;actin cytoskeleton organization and biogenesis;0.000291603296893667!GO:0008250;oligosaccharyl transferase complex;0.000291603296893667!GO:0016564;transcription repressor activity;0.000292859448532564!GO:0000075;cell cycle checkpoint;0.000292882221582736!GO:0051325;interphase;0.000312128735964706!GO:0005048;signal sequence binding;0.000323066451561385!GO:0009892;negative regulation of metabolic process;0.000326871465861492!GO:0005769;early endosome;0.000347179993867129!GO:0004576;oligosaccharyl transferase activity;0.000347179993867129!GO:0051427;hormone receptor binding;0.000349510233310264!GO:0046474;glycerophospholipid biosynthetic process;0.000366679036376218!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000390224461923038!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000392669878383816!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000401564927177852!GO:0005885;Arp2/3 protein complex;0.000477170809570422!GO:0030137;COPI-coated vesicle;0.000513307740559327!GO:0005905;coated pit;0.000575246468334444!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000588749662598651!GO:0016740;transferase activity;0.000664632249246564!GO:0035257;nuclear hormone receptor binding;0.000688528105907678!GO:0005741;mitochondrial outer membrane;0.000695830812713962!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000700919356024251!GO:0018196;peptidyl-asparagine modification;0.000712498562539877!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000712498562539877!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000761527885578125!GO:0016363;nuclear matrix;0.00076368223782009!GO:0046489;phosphoinositide biosynthetic process;0.000790672294532007!GO:0048522;positive regulation of cellular process;0.000854160075508983!GO:0051920;peroxiredoxin activity;0.000886161257353376!GO:0051168;nuclear export;0.000947361874322274!GO:0030176;integral to endoplasmic reticulum membrane;0.00100175746978291!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00104191714645359!GO:0048500;signal recognition particle;0.00104282974672739!GO:0005874;microtubule;0.001071330250641!GO:0048471;perinuclear region of cytoplasm;0.00116011395873286!GO:0006626;protein targeting to mitochondrion;0.00116011395873286!GO:0043284;biopolymer biosynthetic process;0.00116592628963668!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00118413722891319!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00121021198395755!GO:0006383;transcription from RNA polymerase III promoter;0.00124137169763419!GO:0005657;replication fork;0.00126219696398277!GO:0019899;enzyme binding;0.00129038951718081!GO:0008186;RNA-dependent ATPase activity;0.00140606941684699!GO:0006891;intra-Golgi vesicle-mediated transport;0.00141489974989052!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00141489974989052!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00141489974989052!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00141489974989052!GO:0000776;kinetochore;0.00145055684223288!GO:0009165;nucleotide biosynthetic process;0.00145559985058704!GO:0003690;double-stranded DNA binding;0.00146711443279597!GO:0042802;identical protein binding;0.00158232330982502!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00171307851758323!GO:0015631;tubulin binding;0.00173227753378909!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00173227753378909!GO:0015399;primary active transmembrane transporter activity;0.00173227753378909!GO:0030029;actin filament-based process;0.00177104276921536!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00180400837209159!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00180400837209159!GO:0016197;endosome transport;0.00184679936930632!GO:0015992;proton transport;0.00185777809496709!GO:0016481;negative regulation of transcription;0.00191234687428977!GO:0030027;lamellipodium;0.0020927306985109!GO:0031072;heat shock protein binding;0.00210986159087908!GO:0006818;hydrogen transport;0.00212619573235505!GO:0006302;double-strand break repair;0.00216765959533034!GO:0016126;sterol biosynthetic process;0.0021746758119147!GO:0004177;aminopeptidase activity;0.00218398448108151!GO:0030134;ER to Golgi transport vesicle;0.00231338874506177!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00240213448366134!GO:0007052;mitotic spindle organization and biogenesis;0.002402336830384!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00243834383813642!GO:0045047;protein targeting to ER;0.00243834383813642!GO:0007243;protein kinase cascade;0.00249034443535819!GO:0001726;ruffle;0.00249034443535819!GO:0008094;DNA-dependent ATPase activity;0.00254960827746685!GO:0000082;G1/S transition of mitotic cell cycle;0.00263562155487981!GO:0003684;damaged DNA binding;0.00264351953265015!GO:0003729;mRNA binding;0.00265989827754397!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00267181081619415!GO:0043681;protein import into mitochondrion;0.00276778926403109!GO:0006839;mitochondrial transport;0.0028977082901933!GO:0008632;apoptotic program;0.00308934290477667!GO:0000786;nucleosome;0.00309260259058805!GO:0046467;membrane lipid biosynthetic process;0.00313990858529795!GO:0019222;regulation of metabolic process;0.00318512375231236!GO:0030658;transport vesicle membrane;0.00321478402814164!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00321837447012575!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00326089829408103!GO:0006650;glycerophospholipid metabolic process;0.00336480164511906!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00351846397703381!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00351846397703381!GO:0004004;ATP-dependent RNA helicase activity;0.00358429846492732!GO:0008312;7S RNA binding;0.00366291943438484!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00368746128231421!GO:0005684;U2-dependent spliceosome;0.00370426206704457!GO:0030521;androgen receptor signaling pathway;0.00383417605643656!GO:0030127;COPII vesicle coat;0.00387449339031307!GO:0012507;ER to Golgi transport vesicle membrane;0.00387449339031307!GO:0051252;regulation of RNA metabolic process;0.0038757998936948!GO:0045045;secretory pathway;0.00400555448080788!GO:0000059;protein import into nucleus, docking;0.00401329594178229!GO:0006497;protein amino acid lipidation;0.00417273887171868!GO:0008180;signalosome;0.00425502805069615!GO:0065009;regulation of a molecular function;0.00480807349735318!GO:0003678;DNA helicase activity;0.0048464809500038!GO:0051052;regulation of DNA metabolic process;0.00499194266192732!GO:0065007;biological regulation;0.00504114546567673!GO:0031543;peptidyl-proline dioxygenase activity;0.00509409164405103!GO:0019798;procollagen-proline dioxygenase activity;0.00510021256203371!GO:0030132;clathrin coat of coated pit;0.00521065752464866!GO:0003682;chromatin binding;0.00538317446756481!GO:0008047;enzyme activator activity;0.00556022414383713!GO:0030659;cytoplasmic vesicle membrane;0.00566895672096143!GO:0031124;mRNA 3'-end processing;0.0058045904443095!GO:0007050;cell cycle arrest;0.00581411377255343!GO:0030880;RNA polymerase complex;0.00588428285323921!GO:0048487;beta-tubulin binding;0.00594382778799559!GO:0006892;post-Golgi vesicle-mediated transport;0.00594382778799559!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00602550115291011!GO:0005581;collagen;0.00609275456127941!GO:0017166;vinculin binding;0.00627514007574954!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00649426528499153!GO:0015002;heme-copper terminal oxidase activity;0.00649426528499153!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00649426528499153!GO:0004129;cytochrome-c oxidase activity;0.00649426528499153!GO:0006979;response to oxidative stress;0.00650489474358701!GO:0008610;lipid biosynthetic process;0.00650715236658377!GO:0007017;microtubule-based process;0.00653461783500404!GO:0006402;mRNA catabolic process;0.00668516307182089!GO:0044452;nucleolar part;0.00684332892607552!GO:0007006;mitochondrial membrane organization and biogenesis;0.00701871642704444!GO:0000049;tRNA binding;0.00702148411120004!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00702148411120004!GO:0035258;steroid hormone receptor binding;0.00722730933876195!GO:0003746;translation elongation factor activity;0.00730642100609056!GO:0033673;negative regulation of kinase activity;0.00732227151840783!GO:0006469;negative regulation of protein kinase activity;0.00732227151840783!GO:0030660;Golgi-associated vesicle membrane;0.00738322690961303!GO:0007264;small GTPase mediated signal transduction;0.0074334479029087!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00780797418317933!GO:0008139;nuclear localization sequence binding;0.0079846493099894!GO:0016272;prefoldin complex;0.00807670953353143!GO:0043488;regulation of mRNA stability;0.0080907727349855!GO:0043487;regulation of RNA stability;0.0080907727349855!GO:0051087;chaperone binding;0.00817731324485065!GO:0000096;sulfur amino acid metabolic process;0.00818422635170242!GO:0003711;transcription elongation regulator activity;0.00823703023608725!GO:0007093;mitotic cell cycle checkpoint;0.00832011498318113!GO:0042158;lipoprotein biosynthetic process;0.00841963083605125!GO:0030384;phosphoinositide metabolic process;0.008438045870642!GO:0005869;dynactin complex;0.00853961638909605!GO:0006595;polyamine metabolic process;0.00854720445749563!GO:0031902;late endosome membrane;0.00875852013735233!GO:0006310;DNA recombination;0.00898585830713516!GO:0030118;clathrin coat;0.00903161898862206!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00907051061914945!GO:0008033;tRNA processing;0.00912721016844986!GO:0044433;cytoplasmic vesicle part;0.0091389380327364!GO:0046483;heterocycle metabolic process;0.00925069574334204!GO:0006352;transcription initiation;0.00943752909681076!GO:0016251;general RNA polymerase II transcription factor activity;0.00946720479760409!GO:0044262;cellular carbohydrate metabolic process;0.00954179569409751!GO:0051287;NAD binding;0.00962310182528992!GO:0007088;regulation of mitosis;0.00974248856291197!GO:0032984;macromolecular complex disassembly;0.00978584683441622!GO:0051348;negative regulation of transferase activity;0.00983956813103579!GO:0008234;cysteine-type peptidase activity;0.00994099954567254!GO:0008092;cytoskeletal protein binding;0.0104459500829086!GO:0005096;GTPase activator activity;0.010658290145033!GO:0006506;GPI anchor biosynthetic process;0.0110318642972299!GO:0006740;NADPH regeneration;0.0110935140848006!GO:0006098;pentose-phosphate shunt;0.0110935140848006!GO:0050681;androgen receptor binding;0.0111365850727094!GO:0006984;ER-nuclear signaling pathway;0.0111428127218962!GO:0045792;negative regulation of cell size;0.0113106093398106!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0114514628547285!GO:0000428;DNA-directed RNA polymerase complex;0.0114514628547285!GO:0005862;muscle thin filament tropomyosin;0.0114561398190511!GO:0051128;regulation of cellular component organization and biogenesis;0.0115383799954965!GO:0000339;RNA cap binding;0.0116157415287195!GO:0006695;cholesterol biosynthetic process;0.0122381658027382!GO:0031901;early endosome membrane;0.0122455069960127!GO:0022890;inorganic cation transmembrane transporter activity;0.0122631054718502!GO:0040008;regulation of growth;0.0126345298680779!GO:0030308;negative regulation of cell growth;0.0127190120019755!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0128857789410359!GO:0043492;ATPase activity, coupled to movement of substances;0.0141591849505563!GO:0012506;vesicle membrane;0.0142020927540696!GO:0008022;protein C-terminus binding;0.0142185335356405!GO:0043624;cellular protein complex disassembly;0.0144375226820753!GO:0005832;chaperonin-containing T-complex;0.0153676397653086!GO:0016044;membrane organization and biogenesis;0.0153920180936307!GO:0006509;membrane protein ectodomain proteolysis;0.0153987293216718!GO:0033619;membrane protein proteolysis;0.0153987293216718!GO:0007040;lysosome organization and biogenesis;0.0155966768349533!GO:0030518;steroid hormone receptor signaling pathway;0.0156587456152175!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0157359583335646!GO:0006505;GPI anchor metabolic process;0.0158036323858982!GO:0031625;ubiquitin protein ligase binding;0.0158254101648793!GO:0048518;positive regulation of biological process;0.0159443335276441!GO:0009967;positive regulation of signal transduction;0.016008297370602!GO:0022411;cellular component disassembly;0.0160551834972148!GO:0043022;ribosome binding;0.0162286132643516!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0164194477524426!GO:0031418;L-ascorbic acid binding;0.016819787533679!GO:0030041;actin filament polymerization;0.0169650358280339!GO:0043241;protein complex disassembly;0.0176576071761246!GO:0006401;RNA catabolic process;0.0185943214769836!GO:0007030;Golgi organization and biogenesis;0.0189427211835118!GO:0000209;protein polyubiquitination;0.019045672027837!GO:0051539;4 iron, 4 sulfur cluster binding;0.0190664021493561!GO:0005876;spindle microtubule;0.0196610739613053!GO:0031123;RNA 3'-end processing;0.0199916214230586!GO:0006950;response to stress;0.0206689644369432!GO:0005637;nuclear inner membrane;0.0206689644369432!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0211987640870592!GO:0004003;ATP-dependent DNA helicase activity;0.021564342924045!GO:0007033;vacuole organization and biogenesis;0.0218921506875148!GO:0006289;nucleotide-excision repair;0.0220925298026923!GO:0030833;regulation of actin filament polymerization;0.0222723312584618!GO:0000922;spindle pole;0.0224673734178865!GO:0019752;carboxylic acid metabolic process;0.0227481126976542!GO:0007021;tubulin folding;0.0232053456633569!GO:0005801;cis-Golgi network;0.0232561699726427!GO:0006611;protein export from nucleus;0.0234811999052708!GO:0030032;lamellipodium biogenesis;0.0238581555209504!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0238581555209504!GO:0009112;nucleobase metabolic process;0.0240857426152617!GO:0022408;negative regulation of cell-cell adhesion;0.0242701909687548!GO:0006082;organic acid metabolic process;0.0243078121140378!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0243078121140378!GO:0005669;transcription factor TFIID complex;0.0247460121909041!GO:0008320;protein transmembrane transporter activity;0.0249212900767022!GO:0007059;chromosome segregation;0.0251210133582111!GO:0031529;ruffle organization and biogenesis;0.0257163675541538!GO:0047485;protein N-terminus binding;0.0262320495930911!GO:0022406;membrane docking;0.0263583473031229!GO:0048278;vesicle docking;0.0263583473031229!GO:0007034;vacuolar transport;0.026722598012779!GO:0008168;methyltransferase activity;0.0270991454645094!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0270991454645094!GO:0008147;structural constituent of bone;0.0274799600723883!GO:0006376;mRNA splice site selection;0.02776447943072!GO:0000389;nuclear mRNA 3'-splice site recognition;0.02776447943072!GO:0050811;GABA receptor binding;0.0289959709694095!GO:0016408;C-acyltransferase activity;0.0293053762066027!GO:0030503;regulation of cell redox homeostasis;0.029583935643252!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0296086354070013!GO:0003756;protein disulfide isomerase activity;0.0297248581820673!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0297248581820673!GO:0003923;GPI-anchor transamidase activity;0.0297410211502241!GO:0016255;attachment of GPI anchor to protein;0.0297410211502241!GO:0042765;GPI-anchor transamidase complex;0.0297410211502241!GO:0016741;transferase activity, transferring one-carbon groups;0.0297679793149558!GO:0006378;mRNA polyadenylation;0.0298265549970596!GO:0008154;actin polymerization and/or depolymerization;0.0298755612896109!GO:0030125;clathrin vesicle coat;0.0301579699448153!GO:0030665;clathrin coated vesicle membrane;0.0301579699448153!GO:0045941;positive regulation of transcription;0.030479705455266!GO:0035035;histone acetyltransferase binding;0.0305252695800412!GO:0048468;cell development;0.0307932842260607!GO:0042770;DNA damage response, signal transduction;0.030814767711662!GO:0005586;collagen type III;0.0308515722813015!GO:0006405;RNA export from nucleus;0.0312383805723752!GO:0006739;NADP metabolic process;0.031444155535101!GO:0045893;positive regulation of transcription, DNA-dependent;0.0320498180076785!GO:0050662;coenzyme binding;0.0322548182387463!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0329922779072876!GO:0033559;unsaturated fatty acid metabolic process;0.0330817525580121!GO:0006636;unsaturated fatty acid biosynthetic process;0.0330817525580121!GO:0004197;cysteine-type endopeptidase activity;0.034041642217511!GO:0031371;ubiquitin conjugating enzyme complex;0.034107095466852!GO:0005784;translocon complex;0.0343941554854251!GO:0008538;proteasome activator activity;0.0345177034104978!GO:0005774;vacuolar membrane;0.0345692330768164!GO:0030496;midbody;0.03466792243225!GO:0006354;RNA elongation;0.0347880117523082!GO:0016584;nucleosome positioning;0.0350273966906623!GO:0032200;telomere organization and biogenesis;0.0350604142904805!GO:0000723;telomere maintenance;0.0350604142904805!GO:0009116;nucleoside metabolic process;0.0351043695379535!GO:0032508;DNA duplex unwinding;0.0352225746686881!GO:0032392;DNA geometric change;0.0352225746686881!GO:0004674;protein serine/threonine kinase activity;0.0352225746686881!GO:0032940;secretion by cell;0.0354715570938401!GO:0044420;extracellular matrix part;0.0357993755654829!GO:0000910;cytokinesis;0.0359123882716474!GO:0007569;cell aging;0.0361045520594808!GO:0016860;intramolecular oxidoreductase activity;0.0361045520594808!GO:0030119;AP-type membrane coat adaptor complex;0.0362005327259948!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0363817828046315!GO:0030508;thiol-disulfide exchange intermediate activity;0.0365687754842778!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0365687754842778!GO:0004527;exonuclease activity;0.0365797702032271!GO:0006790;sulfur metabolic process;0.0388825861955185!GO:0006144;purine base metabolic process;0.0389659983586225!GO:0006904;vesicle docking during exocytosis;0.0389861311134194!GO:0030433;ER-associated protein catabolic process;0.0390439158439891!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0390439158439891!GO:0050790;regulation of catalytic activity;0.0390439158439891!GO:0045936;negative regulation of phosphate metabolic process;0.0391892524717391!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0398441171409792!GO:0006520;amino acid metabolic process;0.0401423590972022!GO:0043130;ubiquitin binding;0.0406302734738078!GO:0032182;small conjugating protein binding;0.0406302734738078!GO:0008652;amino acid biosynthetic process;0.041308223894296!GO:0006007;glucose catabolic process;0.0415690287835936!GO:0051540;metal cluster binding;0.0429473103477175!GO:0051536;iron-sulfur cluster binding;0.0429473103477175!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0430094412288041!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0430094412288041!GO:0006220;pyrimidine nucleotide metabolic process;0.0433134498933872!GO:0006275;regulation of DNA replication;0.0434072340650053!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0434072340650053!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0434072340650053!GO:0019783;small conjugating protein-specific protease activity;0.0440561232428403!GO:0030911;TPR domain binding;0.0443976904995684!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0444535467959794!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0455610074470408!GO:0004448;isocitrate dehydrogenase activity;0.0460315243301419!GO:0005758;mitochondrial intermembrane space;0.0464478366676814!GO:0045926;negative regulation of growth;0.0476047431083671!GO:0005938;cell cortex;0.0478397709133759!GO:0004843;ubiquitin-specific protease activity;0.0478528323849186!GO:0009066;aspartate family amino acid metabolic process;0.0478930408197239!GO:0046426;negative regulation of JAK-STAT cascade;0.0479779611417216!GO:0008097;5S rRNA binding;0.0484594979379083!GO:0001725;stress fiber;0.0484594979379083!GO:0032432;actin filament bundle;0.0484594979379083!GO:0051101;regulation of DNA binding;0.0487007505876356!GO:0008637;apoptotic mitochondrial changes;0.0487582129542273!GO:0006417;regulation of translation;0.0490993788518981!GO:0005099;Ras GTPase activator activity;0.0490993788518981!GO:0022884;macromolecule transmembrane transporter activity;0.0490993788518981!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0490993788518981!GO:0017134;fibroblast growth factor binding;0.0491801693118167!GO:0043065;positive regulation of apoptosis;0.0491801693118167!GO:0035267;NuA4 histone acetyltransferase complex;0.0492699818415902!GO:0030145;manganese ion binding;0.0493156011019232 | |||
|sample_id=11257 | |sample_id=11257 | ||
|sample_note=Originally library704 tailing failed, the remaining sample is being rerun | |sample_note=Originally library704 tailing failed, the remaining sample is being rerun | ||
| Line 76: | Line 105: | ||
|sample_tissue=prostate | |sample_tissue=prostate | ||
|top_motifs=TAL1_TCF{3,4,12}:1.68626769188;MYBL2:1.45426480339;HSF1,2:1.36818441142;ESR1:1.3582147588;KLF4:1.2653990987;ZNF238:1.15811818011;GZF1:0.974978658488;ZNF384:0.971348359735;TEAD1:0.960800741505;ALX4:0.887324045361;SRF:0.867981698893;LHX3,4:0.854174031139;IKZF1:0.832782970661;EN1,2:0.742418876402;PATZ1:0.737581515778;FOXL1:0.712090791681;NKX2-2,8:0.682917620912;PRDM1:0.682188257748;GFI1B:0.676015723574;SPZ1:0.66241337534;UFEwm:0.656684077132;CRX:0.630386929707;EBF1:0.627494867174;T:0.623691628232;CDC5L:0.618760019941;MZF1:0.615468582898;TBX4,5:0.597883396697;MYB:0.596485213034;TEF:0.582978445423;GTF2I:0.568425340703;GATA4:0.558381657884;TLX1..3_NFIC{dimer}:0.557923517757;TFAP4:0.555379656435;GFI1:0.549874680588;NR3C1:0.507164213493;NHLH1,2:0.503427485193;NKX3-1:0.497585217246;YY1:0.494026405253;AIRE:0.489549233652;TFCP2:0.484106533373;ELK1,4_GABP{A,B1}:0.481392609834;TP53:0.469743239211;MAZ:0.459449523923;HMX1:0.440852476696;ZIC1..3:0.413686902131;SMAD1..7,9:0.412275808747;NFE2L2:0.404861963277;GTF2A1,2:0.403358978756;PAX1,9:0.375260969354;NR5A1,2:0.372215217011;ZNF148:0.367301446655;HAND1,2:0.364397736956;ATF6:0.357057519646;HMGA1,2:0.353192626874;RXR{A,B,G}:0.33398567106;NKX6-1,2:0.319574619815;GLI1..3:0.317538973219;NRF1:0.313232434442;PBX1:0.300405215698;PPARG:0.299683347062;HLF:0.293922631351;XCPE1{core}:0.290370723069;NFATC1..3:0.281301813479;SOX17:0.275007674343;FOXD3:0.274514208274;MYFfamily:0.266139096575;DBP:0.264154722147;FOX{I1,J2}:0.26184663066;E2F1..5:0.258624117863;NFIX:0.257484857967;HOX{A5,B5}:0.252384602643;XBP1:0.250009257494;TBP:0.237289296736;ZNF143:0.236703094268;POU5F1:0.235378654939;RFX1:0.225694755758;PRRX1,2:0.198067536831;MAFB:0.19763810879;SOX5:0.189044812905;PAX5:0.185344012956;RREB1:0.171125506549;MTE{core}:0.147490824353;TOPORS:0.147324253532;TFAP2{A,C}:0.134309578885;ZNF423:0.128501602195;IRF1,2:0.123041565461;NFY{A,B,C}:0.122995506422;NANOG{mouse}:0.121234157067;NR1H4:0.118913825409;ZBTB6:0.117579562251;HOX{A4,D4}:0.117123699217;HES1:0.11259694848;LEF1_TCF7_TCF7L1,2:0.107261856266;AHR_ARNT_ARNT2:0.0805496315573;MED-1{core}:0.0728382857961;HNF4A_NR2F1,2:0.0726270502001;PDX1:0.0689351638732;PAX3,7:0.0621190689563;ADNP_IRX_SIX_ZHX:0.0582713951848;SP1:0.0557496899202;NKX3-2:0.0540889320837;EVI1:0.0447257894122;TFDP1:0.034674138519;NR6A1:0.0245362394749;CEBPA,B_DDIT3:0.000314974176245;DMAP1_NCOR{1,2}_SMARC:-0.000950076378334;TFAP2B:-0.00426749493377;NFE2L1:-0.0110020269773;NFE2:-0.0377799387329;RXRA_VDR{dimer}:-0.0410698547952;SREBF1,2:-0.0474189317547;PAX6:-0.0517258351206;PAX4:-0.0603333701517;STAT1,3:-0.0649137863741;BACH2:-0.0691632720023;HNF1A:-0.0827907969728;TLX2:-0.0919568965526;RBPJ:-0.0947335340024;FOXQ1:-0.0961528995756;ZFP161:-0.108365127113;ELF1,2,4:-0.114376861274;POU3F1..4:-0.118976321155;FOXO1,3,4:-0.121169313721;FOS_FOS{B,L1}_JUN{B,D}:-0.134755152869;HIC1:-0.140423116298;IRF7:-0.142910084828;ALX1:-0.159463276866;HOXA9_MEIS1:-0.162664947811;STAT2,4,6:-0.178969723115;NKX2-3_NKX2-5:-0.189214703527;EGR1..3:-0.190148304403;HIF1A:-0.196039602025;ATF2:-0.198520382479;ARID5B:-0.199755897326;MEF2{A,B,C,D}:-0.210596544042;MTF1:-0.220069399476;bHLH_family:-0.229931842934;TGIF1:-0.24005772425;FOXP1:-0.247772586267;RFX2..5_RFXANK_RFXAP:-0.258995078308;GCM1,2:-0.259138668525;ONECUT1,2:-0.269866859154;FOX{D1,D2}:-0.299904378339;FOXM1:-0.307536410685;NFKB1_REL_RELA:-0.310956775167;PAX8:-0.327491491459;FOSL2:-0.327969210203;RUNX1..3:-0.339654244643;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.350219414689;FOXN1:-0.364099861533;REST:-0.38453601627;NFIL3:-0.384845513744;SOX2:-0.388108077061;STAT5{A,B}:-0.393697320293;ESRRA:-0.410051422852;NKX2-1,4:-0.411150204439;SPI1:-0.432433753747;BREu{core}:-0.439547563394;CDX1,2,4:-0.44059068745;BPTF:-0.448636766669;JUN:-0.462444466351;FOX{F1,F2,J1}:-0.487099169042;SPIB:-0.490820253447;SOX{8,9,10}:-0.503410146148;AR:-0.505511532124;ETS1,2:-0.505918269362;OCT4_SOX2{dimer}:-0.510841571101;CREB1:-0.512662843973;ATF5_CREB3:-0.524840708633;LMO2:-0.532856359492;SNAI1..3:-0.534323253086;EP300:-0.536542697081;GATA6:-0.53814746127;RORA:-0.555765724668;CUX2:-0.572835618207;POU1F1:-0.599271852582;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.614790718482;FOXA2:-0.650191943926;ATF4:-0.656029955705;HOX{A6,A7,B6,B7}:-0.675284863338;PAX2:-0.692313354042;MYOD1:-0.713959475939;HBP1_HMGB_SSRP1_UBTF:-0.716150917279;NANOG:-0.828774536511;ZEB1:-0.884433594195;FOXP3:-0.925131987526;VSX1,2:-0.972767150284;POU6F1:-0.98707747662;PITX1..3:-0.992015498024;ZBTB16:-1.02821624361;POU2F1..3:-1.03341494263;IKZF2:-1.33846470873 | |top_motifs=TAL1_TCF{3,4,12}:1.68626769188;MYBL2:1.45426480339;HSF1,2:1.36818441142;ESR1:1.3582147588;KLF4:1.2653990987;ZNF238:1.15811818011;GZF1:0.974978658488;ZNF384:0.971348359735;TEAD1:0.960800741505;ALX4:0.887324045361;SRF:0.867981698893;LHX3,4:0.854174031139;IKZF1:0.832782970661;EN1,2:0.742418876402;PATZ1:0.737581515778;FOXL1:0.712090791681;NKX2-2,8:0.682917620912;PRDM1:0.682188257748;GFI1B:0.676015723574;SPZ1:0.66241337534;UFEwm:0.656684077132;CRX:0.630386929707;EBF1:0.627494867174;T:0.623691628232;CDC5L:0.618760019941;MZF1:0.615468582898;TBX4,5:0.597883396697;MYB:0.596485213034;TEF:0.582978445423;GTF2I:0.568425340703;GATA4:0.558381657884;TLX1..3_NFIC{dimer}:0.557923517757;TFAP4:0.555379656435;GFI1:0.549874680588;NR3C1:0.507164213493;NHLH1,2:0.503427485193;NKX3-1:0.497585217246;YY1:0.494026405253;AIRE:0.489549233652;TFCP2:0.484106533373;ELK1,4_GABP{A,B1}:0.481392609834;TP53:0.469743239211;MAZ:0.459449523923;HMX1:0.440852476696;ZIC1..3:0.413686902131;SMAD1..7,9:0.412275808747;NFE2L2:0.404861963277;GTF2A1,2:0.403358978756;PAX1,9:0.375260969354;NR5A1,2:0.372215217011;ZNF148:0.367301446655;HAND1,2:0.364397736956;ATF6:0.357057519646;HMGA1,2:0.353192626874;RXR{A,B,G}:0.33398567106;NKX6-1,2:0.319574619815;GLI1..3:0.317538973219;NRF1:0.313232434442;PBX1:0.300405215698;PPARG:0.299683347062;HLF:0.293922631351;XCPE1{core}:0.290370723069;NFATC1..3:0.281301813479;SOX17:0.275007674343;FOXD3:0.274514208274;MYFfamily:0.266139096575;DBP:0.264154722147;FOX{I1,J2}:0.26184663066;E2F1..5:0.258624117863;NFIX:0.257484857967;HOX{A5,B5}:0.252384602643;XBP1:0.250009257494;TBP:0.237289296736;ZNF143:0.236703094268;POU5F1:0.235378654939;RFX1:0.225694755758;PRRX1,2:0.198067536831;MAFB:0.19763810879;SOX5:0.189044812905;PAX5:0.185344012956;RREB1:0.171125506549;MTE{core}:0.147490824353;TOPORS:0.147324253532;TFAP2{A,C}:0.134309578885;ZNF423:0.128501602195;IRF1,2:0.123041565461;NFY{A,B,C}:0.122995506422;NANOG{mouse}:0.121234157067;NR1H4:0.118913825409;ZBTB6:0.117579562251;HOX{A4,D4}:0.117123699217;HES1:0.11259694848;LEF1_TCF7_TCF7L1,2:0.107261856266;AHR_ARNT_ARNT2:0.0805496315573;MED-1{core}:0.0728382857961;HNF4A_NR2F1,2:0.0726270502001;PDX1:0.0689351638732;PAX3,7:0.0621190689563;ADNP_IRX_SIX_ZHX:0.0582713951848;SP1:0.0557496899202;NKX3-2:0.0540889320837;EVI1:0.0447257894122;TFDP1:0.034674138519;NR6A1:0.0245362394749;CEBPA,B_DDIT3:0.000314974176245;DMAP1_NCOR{1,2}_SMARC:-0.000950076378334;TFAP2B:-0.00426749493377;NFE2L1:-0.0110020269773;NFE2:-0.0377799387329;RXRA_VDR{dimer}:-0.0410698547952;SREBF1,2:-0.0474189317547;PAX6:-0.0517258351206;PAX4:-0.0603333701517;STAT1,3:-0.0649137863741;BACH2:-0.0691632720023;HNF1A:-0.0827907969728;TLX2:-0.0919568965526;RBPJ:-0.0947335340024;FOXQ1:-0.0961528995756;ZFP161:-0.108365127113;ELF1,2,4:-0.114376861274;POU3F1..4:-0.118976321155;FOXO1,3,4:-0.121169313721;FOS_FOS{B,L1}_JUN{B,D}:-0.134755152869;HIC1:-0.140423116298;IRF7:-0.142910084828;ALX1:-0.159463276866;HOXA9_MEIS1:-0.162664947811;STAT2,4,6:-0.178969723115;NKX2-3_NKX2-5:-0.189214703527;EGR1..3:-0.190148304403;HIF1A:-0.196039602025;ATF2:-0.198520382479;ARID5B:-0.199755897326;MEF2{A,B,C,D}:-0.210596544042;MTF1:-0.220069399476;bHLH_family:-0.229931842934;TGIF1:-0.24005772425;FOXP1:-0.247772586267;RFX2..5_RFXANK_RFXAP:-0.258995078308;GCM1,2:-0.259138668525;ONECUT1,2:-0.269866859154;FOX{D1,D2}:-0.299904378339;FOXM1:-0.307536410685;NFKB1_REL_RELA:-0.310956775167;PAX8:-0.327491491459;FOSL2:-0.327969210203;RUNX1..3:-0.339654244643;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.350219414689;FOXN1:-0.364099861533;REST:-0.38453601627;NFIL3:-0.384845513744;SOX2:-0.388108077061;STAT5{A,B}:-0.393697320293;ESRRA:-0.410051422852;NKX2-1,4:-0.411150204439;SPI1:-0.432433753747;BREu{core}:-0.439547563394;CDX1,2,4:-0.44059068745;BPTF:-0.448636766669;JUN:-0.462444466351;FOX{F1,F2,J1}:-0.487099169042;SPIB:-0.490820253447;SOX{8,9,10}:-0.503410146148;AR:-0.505511532124;ETS1,2:-0.505918269362;OCT4_SOX2{dimer}:-0.510841571101;CREB1:-0.512662843973;ATF5_CREB3:-0.524840708633;LMO2:-0.532856359492;SNAI1..3:-0.534323253086;EP300:-0.536542697081;GATA6:-0.53814746127;RORA:-0.555765724668;CUX2:-0.572835618207;POU1F1:-0.599271852582;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.614790718482;FOXA2:-0.650191943926;ATF4:-0.656029955705;HOX{A6,A7,B6,B7}:-0.675284863338;PAX2:-0.692313354042;MYOD1:-0.713959475939;HBP1_HMGB_SSRP1_UBTF:-0.716150917279;NANOG:-0.828774536511;ZEB1:-0.884433594195;FOXP3:-0.925131987526;VSX1,2:-0.972767150284;POU6F1:-0.98707747662;PITX1..3:-0.992015498024;ZBTB16:-1.02821624361;POU2F1..3:-1.03341494263;IKZF2:-1.33846470873 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11257-116F6;search_select_hide=table117:FF:11257-116F6 | |||
}} | }} | ||
Latest revision as of 16:28, 3 June 2020
| Name: | Smooth Muscle Cells - Prostate, donor1 |
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| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11920 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11920
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11920
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.243 |
| 10 | 10 | 0.828 |
| 100 | 100 | 0.65 |
| 101 | 101 | 0.367 |
| 102 | 102 | 0.194 |
| 103 | 103 | 0.673 |
| 104 | 104 | 0.889 |
| 105 | 105 | 0.537 |
| 106 | 106 | 0.0469 |
| 107 | 107 | 0.968 |
| 108 | 108 | 0.74 |
| 109 | 109 | 0.73 |
| 11 | 11 | 0.698 |
| 110 | 110 | 0.42 |
| 111 | 111 | 0.0976 |
| 112 | 112 | 0.783 |
| 113 | 113 | 0.189 |
| 114 | 114 | 0.112 |
| 115 | 115 | 0.628 |
| 116 | 116 | 0.764 |
| 117 | 117 | 0.827 |
| 118 | 118 | 0.521 |
| 119 | 119 | 0.427 |
| 12 | 12 | 0.35 |
| 120 | 120 | 0.588 |
| 121 | 121 | 0.983 |
| 122 | 122 | 0.0287 |
| 123 | 123 | 0.00781 |
| 124 | 124 | 0.976 |
| 125 | 125 | 0.132 |
| 126 | 126 | 0.688 |
| 127 | 127 | 0.943 |
| 128 | 128 | 0.24 |
| 129 | 129 | 0.194 |
| 13 | 13 | 0.452 |
| 130 | 130 | 0.0537 |
| 131 | 131 | 0.586 |
| 132 | 132 | 0.224 |
| 133 | 133 | 0.818 |
| 134 | 134 | 0.182 |
| 135 | 135 | 0.641 |
| 136 | 136 | 0.696 |
| 137 | 137 | 0.111 |
| 138 | 138 | 0.172 |
| 139 | 139 | 0.0403 |
| 14 | 14 | 0.18 |
| 140 | 140 | 0.367 |
| 141 | 141 | 0.226 |
| 142 | 142 | 0.826 |
| 143 | 143 | 0.482 |
| 144 | 144 | 0.824 |
| 145 | 145 | 0.272 |
| 146 | 146 | 0.381 |
| 147 | 147 | 0.173 |
| 148 | 148 | 0.771 |
| 149 | 149 | 0.223 |
| 15 | 15 | 0.0356 |
| 150 | 150 | 0.917 |
| 151 | 151 | 0.354 |
| 152 | 152 | 0.432 |
| 153 | 153 | 0.685 |
| 154 | 154 | 0.181 |
| 155 | 155 | 0.0521 |
| 156 | 156 | 0.597 |
| 157 | 157 | 0.413 |
| 158 | 158 | 0.0498 |
| 159 | 159 | 0.594 |
| 16 | 16 | 0.929 |
| 160 | 160 | 0.694 |
| 161 | 161 | 0.316 |
| 162 | 162 | 0.689 |
| 163 | 163 | 0.979 |
| 164 | 164 | 0.643 |
| 165 | 165 | 0.14 |
| 166 | 166 | 0.135 |
| 167 | 167 | 0.516 |
| 168 | 168 | 0.972 |
| 169 | 169 | 0.178 |
| 17 | 17 | 0.688 |
| 18 | 18 | 0.741 |
| 19 | 19 | 0.0322 |
| 2 | 2 | 0.248 |
| 20 | 20 | 0.431 |
| 21 | 21 | 0.378 |
| 22 | 22 | 0.308 |
| 23 | 23 | 0.757 |
| 24 | 24 | 0.601 |
| 25 | 25 | 0.327 |
| 26 | 26 | 0.272 |
| 27 | 27 | 0.641 |
| 28 | 28 | 0.222 |
| 29 | 29 | 0.881 |
| 3 | 3 | 0.739 |
| 30 | 30 | 0.225 |
| 31 | 31 | 0.85 |
| 32 | 32 | 5.77066e-6 |
| 33 | 33 | 1 |
| 34 | 34 | 0.896 |
| 35 | 35 | 0.435 |
| 36 | 36 | 0.166 |
| 37 | 37 | 0.696 |
| 38 | 38 | 0.171 |
| 39 | 39 | 0.478 |
| 4 | 4 | 0.0328 |
| 40 | 40 | 0.568 |
| 41 | 41 | 0.0401 |
| 42 | 42 | 0.479 |
| 43 | 43 | 0.314 |
| 44 | 44 | 0.581 |
| 45 | 45 | 0.938 |
| 46 | 46 | 0.605 |
| 47 | 47 | 0.437 |
| 48 | 48 | 0.429 |
| 49 | 49 | 0.113 |
| 5 | 5 | 0.292 |
| 50 | 50 | 0.417 |
| 51 | 51 | 0.952 |
| 52 | 52 | 0.5 |
| 53 | 53 | 0.29 |
| 54 | 54 | 0.923 |
| 55 | 55 | 0.768 |
| 56 | 56 | 0.667 |
| 57 | 57 | 0.365 |
| 58 | 58 | 0.237 |
| 59 | 59 | 0.638 |
| 6 | 6 | 0.355 |
| 60 | 60 | 0.127 |
| 61 | 61 | 0.954 |
| 62 | 62 | 0.405 |
| 63 | 63 | 0.693 |
| 64 | 64 | 0.445 |
| 65 | 65 | 0.535 |
| 66 | 66 | 0.531 |
| 67 | 67 | 0.728 |
| 68 | 68 | 0.821 |
| 69 | 69 | 0.754 |
| 7 | 7 | 0.167 |
| 70 | 70 | 0.0284 |
| 71 | 71 | 0.872 |
| 72 | 72 | 0.523 |
| 73 | 73 | 0.265 |
| 74 | 74 | 0.734 |
| 75 | 75 | 0.873 |
| 76 | 76 | 0.228 |
| 77 | 77 | 0.468 |
| 78 | 78 | 0.025 |
| 79 | 79 | 0.138 |
| 8 | 8 | 0.862 |
| 80 | 80 | 0.617 |
| 81 | 81 | 0.191 |
| 82 | 82 | 0.627 |
| 83 | 83 | 0.132 |
| 84 | 84 | 0.955 |
| 85 | 85 | 0.144 |
| 86 | 86 | 0.877 |
| 87 | 87 | 0.568 |
| 88 | 88 | 0.652 |
| 89 | 89 | 0.615 |
| 9 | 9 | 0.698 |
| 90 | 90 | 0.318 |
| 91 | 91 | 0.635 |
| 92 | 92 | 0.596 |
| 93 | 93 | 0.519 |
| 94 | 94 | 0.62 |
| 95 | 95 | 0.688 |
| 96 | 96 | 0.215 |
| 97 | 97 | 0.517 |
| 98 | 98 | 0.0524 |
| 99 | 99 | 0.0275 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11920
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000183 human smooth muscle cell of prostate sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
1000487 (smooth muscle cell of prostate)
UBERON: Anatomy
0000468 (multi-cellular organism)
0002367 (prostate gland)
0005156 (reproductive structure)
0004119 (endoderm-derived structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002530 (gland)
0010147 (male accessory sex gland)
0010317 (germ layer / neural crest derived structure)
0003937 (sex gland)
0005399 (male reproductive gland)
0003101 (male organism)
0000079 (male reproductive system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000167 (smooth muscle cell sample)
0000183 (human smooth muscle cell of prostate sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000514 (smooth muscle myoblast)
