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{{f5samples
{{f5samples
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|DRA_sample_Accession=CAGE@SAMD00004994
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000224,CL:0000255,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000842,CL:0000988,CL:0002087,CL:0002320,CL:0002371
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004994
|accession_numbers=CAGE;DRX008402;DRR009274;DRZ000699;DRZ002084;DRZ012049;DRZ013434
|accession_numbers_RNASeq=sRNA-Seq;DRX037067;DRR041433;DRZ007075
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|comment=
|comment=
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|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|
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|fonse_cell_line_closure=
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|fonse_treatment_closure=
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|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor2.CNhs11958.11312-117C7.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor2.CNhs11958.11312-117C7.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor2.CNhs11958.11312-117C7.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor2.CNhs11958.11312-117C7.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Peripheral%2520Blood%2520Mononuclear%2520Cells%252c%2520donor2.CNhs11958.11312-117C7.hg38.nobarcode.ctss.bed.gz
|id=FF:11312-117C7
|id=FF:11312-117C7
|is_a=EFO:0002091;;FF:0000002;;FF:0000135;;FF:0000210
|is_a=EFO:0002091;;FF:0000135
|is_obsolete=
|library_id=CNhs11958
|library_id_phase_based=2:CNhs11958
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11312
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10005.CGTACG.11312
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11312
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10005.CGTACG.11312
|name=Peripheral Blood Mononuclear Cells, donor2
|name=Peripheral Blood Mononuclear Cells, donor2
|namespace=FANTOM5
|namespace=FANTOM5
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|profile_cagescan=,,,
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|profile_hcage=CNhs11958,LSID836,release011,COMPLETED
|profile_hcage=CNhs11958,LSID836,release011,COMPLETED
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=117
|rna_box=117
|rna_catalog_number=3H100-10-10
|rna_catalog_number=3H100-10-10
Line 56: Line 82:
|rna_tube_id=117C7
|rna_tube_id=117C7
|rna_weight_ug=10
|rna_weight_ug=10
|rnaseq_library_id=SRhi10005.CGTACG
|sample_age=65
|sample_age=65
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_line=
Line 69: Line 97:
|sample_ethnicity=C
|sample_ethnicity=C
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.1839754847618e-227!GO:0043227;membrane-bound organelle;7.16257637921714e-154!GO:0043231;intracellular membrane-bound organelle;1.19784999329418e-153!GO:0043226;organelle;8.85812285195386e-143!GO:0043229;intracellular organelle;4.10423335468939e-142!GO:0005737;cytoplasm;8.92036560284031e-127!GO:0044422;organelle part;4.55802732693617e-82!GO:0043170;macromolecule metabolic process;2.46765354326543e-81!GO:0044446;intracellular organelle part;1.55877025259463e-80!GO:0005634;nucleus;2.59744841132131e-80!GO:0044237;cellular metabolic process;3.81532508051672e-80!GO:0044238;primary metabolic process;1.40517878472097e-78!GO:0044444;cytoplasmic part;2.28568955616575e-78!GO:0005515;protein binding;2.22764484363901e-71!GO:0032991;macromolecular complex;3.1416104188895e-69!GO:0044428;nuclear part;8.45797602920912e-63!GO:0003723;RNA binding;2.51504840095358e-62!GO:0030529;ribonucleoprotein complex;2.86583856761867e-55!GO:0043283;biopolymer metabolic process;2.55883018821341e-54!GO:0043233;organelle lumen;5.00972840655433e-49!GO:0031974;membrane-enclosed lumen;5.00972840655433e-49!GO:0010467;gene expression;7.00864904470699e-48!GO:0019538;protein metabolic process;3.04598171668364e-47!GO:0044267;cellular protein metabolic process;2.44380305131548e-44!GO:0033036;macromolecule localization;5.67104623343741e-44!GO:0044260;cellular macromolecule metabolic process;6.02169012949131e-44!GO:0015031;protein transport;8.19577085302228e-43!GO:0006412;translation;1.67164849358634e-42!GO:0045184;establishment of protein localization;1.42813127984739e-41!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.00729301658001e-40!GO:0008104;protein localization;1.47010814772103e-40!GO:0031981;nuclear lumen;8.90300869381693e-39!GO:0043234;protein complex;2.0346554444747e-36!GO:0016071;mRNA metabolic process;3.56245589734514e-36!GO:0006396;RNA processing;1.02951394605399e-35!GO:0005739;mitochondrion;9.87550144381006e-32!GO:0008380;RNA splicing;1.79699285919545e-31!GO:0005829;cytosol;1.79699285919545e-31!GO:0016043;cellular component organization and biogenesis;4.77419399958384e-31!GO:0006915;apoptosis;1.12739196347122e-30!GO:0031090;organelle membrane;1.25399930430863e-30!GO:0012501;programmed cell death;1.4443219393908e-30!GO:0009059;macromolecule biosynthetic process;5.32410184515507e-30!GO:0006397;mRNA processing;1.74193694022423e-29!GO:0046907;intracellular transport;2.79223682024348e-29!GO:0005840;ribosome;4.49129352731606e-29!GO:0008219;cell death;6.06272389361027e-29!GO:0016265;death;6.06272389361027e-29!GO:0031967;organelle envelope;8.73916613288682e-29!GO:0031975;envelope;1.85433046742596e-28!GO:0003676;nucleic acid binding;2.01642999349709e-28!GO:0006886;intracellular protein transport;2.55486298717197e-28!GO:0065003;macromolecular complex assembly;5.70715836104085e-26!GO:0005654;nucleoplasm;6.08331027520853e-26!GO:0003735;structural constituent of ribosome;8.90109921368211e-26!GO:0016070;RNA metabolic process;3.79399188340048e-25!GO:0044249;cellular biosynthetic process;9.95194107437811e-25!GO:0033279;ribosomal subunit;9.95194107437811e-25!GO:0005681;spliceosome;7.04770762809121e-24!GO:0009058;biosynthetic process;7.62651538301287e-24!GO:0000166;nucleotide binding;1.01161205894956e-23!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.99762015790556e-23!GO:0044429;mitochondrial part;3.07619030933382e-23!GO:0051649;establishment of cellular localization;9.61537936766701e-23!GO:0022607;cellular component assembly;9.8985589354198e-23!GO:0051641;cellular localization;1.09663387515919e-22!GO:0042981;regulation of apoptosis;2.03171464093129e-21!GO:0044451;nucleoplasm part;2.23902335984436e-21!GO:0044445;cytosolic part;2.24324797946767e-21!GO:0050794;regulation of cellular process;2.5721930138135e-21!GO:0008134;transcription factor binding;2.91713043336934e-21!GO:0043067;regulation of programmed cell death;5.07902832302166e-21!GO:0043412;biopolymer modification;1.19867110869332e-20!GO:0006259;DNA metabolic process;3.4648675091953e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.75482391057863e-19!GO:0006512;ubiquitin cycle;1.24186903578015e-18!GO:0006464;protein modification process;1.30865039905657e-18!GO:0043687;post-translational protein modification;2.64961288362792e-18!GO:0006996;organelle organization and biogenesis;3.22303548204768e-18!GO:0002376;immune system process;4.82265048393427e-18!GO:0044265;cellular macromolecule catabolic process;5.47715003119748e-18!GO:0032553;ribonucleotide binding;9.82154968379942e-18!GO:0032555;purine ribonucleotide binding;9.82154968379942e-18!GO:0006913;nucleocytoplasmic transport;3.43651474337077e-17!GO:0048523;negative regulation of cellular process;6.69280475974409e-17!GO:0005740;mitochondrial envelope;7.93175652748919e-17!GO:0051169;nuclear transport;8.28500037395771e-17!GO:0050789;regulation of biological process;1.10539509680573e-16!GO:0017076;purine nucleotide binding;1.13904304541896e-16!GO:0006605;protein targeting;1.50808315742063e-16!GO:0031966;mitochondrial membrane;1.68297531542206e-16!GO:0016462;pyrophosphatase activity;3.0092639800545e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.429501187448e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;4.72829926090646e-16!GO:0006119;oxidative phosphorylation;6.18046216238549e-16!GO:0017111;nucleoside-triphosphatase activity;7.32271302179318e-16!GO:0019941;modification-dependent protein catabolic process;7.35294882197884e-16!GO:0043632;modification-dependent macromolecule catabolic process;7.35294882197884e-16!GO:0019866;organelle inner membrane;8.23196690037555e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;8.77625037746108e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.19125277291867e-15!GO:0044257;cellular protein catabolic process;1.92474844426972e-15!GO:0007243;protein kinase cascade;1.96987669362183e-15!GO:0022618;protein-RNA complex assembly;2.34644882097559e-15!GO:0016604;nuclear body;3.11407634618252e-15!GO:0006793;phosphorus metabolic process;4.27188693933134e-15!GO:0006796;phosphate metabolic process;4.27188693933134e-15!GO:0016192;vesicle-mediated transport;6.03047662217899e-15!GO:0016874;ligase activity;6.27357825218856e-15!GO:0043285;biopolymer catabolic process;8.41615690229967e-15!GO:0048519;negative regulation of biological process;1.00749978016434e-14!GO:0019222;regulation of metabolic process;5.03996353550855e-14!GO:0005524;ATP binding;5.84898451459244e-14!GO:0032559;adenyl ribonucleotide binding;1.32138588292166e-13!GO:0007242;intracellular signaling cascade;1.61962197926793e-13!GO:0009057;macromolecule catabolic process;1.83603190146042e-13!GO:0015935;small ribosomal subunit;1.84021094730106e-13!GO:0005743;mitochondrial inner membrane;2.00019341254137e-13!GO:0016310;phosphorylation;2.28118025199639e-13!GO:0016607;nuclear speck;2.92558748733779e-13!GO:0003712;transcription cofactor activity;3.33760378436144e-13!GO:0005730;nucleolus;5.85117108444612e-13!GO:0005635;nuclear envelope;6.19040754312456e-13!GO:0006955;immune response;6.22528651437508e-13!GO:0008135;translation factor activity, nucleic acid binding;7.2886710259999e-13!GO:0065007;biological regulation;7.72329794288522e-13!GO:0048770;pigment granule;8.6638382380102e-13!GO:0042470;melanosome;8.6638382380102e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.6837171607691e-13!GO:0006366;transcription from RNA polymerase II promoter;9.08272488832489e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;1.04186913787781e-12!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.60590584963698e-12!GO:0030554;adenyl nucleotide binding;1.60590584963698e-12!GO:0051246;regulation of protein metabolic process;2.09668873785782e-12!GO:0015934;large ribosomal subunit;2.34897962390734e-12!GO:0043069;negative regulation of programmed cell death;2.95162691752749e-12!GO:0043066;negative regulation of apoptosis;3.8042060941981e-12!GO:0044248;cellular catabolic process;4.2957686170923e-12!GO:0006323;DNA packaging;5.39567203861444e-12!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;6.33708833956312e-12!GO:0017038;protein import;7.27577517637978e-12!GO:0065009;regulation of a molecular function;8.27995841040731e-12!GO:0044455;mitochondrial membrane part;1.22287962447238e-11!GO:0012505;endomembrane system;2.29860449628309e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.34342766050179e-11!GO:0006916;anti-apoptosis;2.43052387630195e-11!GO:0030163;protein catabolic process;2.69426962426381e-11!GO:0031323;regulation of cellular metabolic process;3.05512632457984e-11!GO:0007049;cell cycle;3.26736141198059e-11!GO:0005768;endosome;3.42397256592255e-11!GO:0031965;nuclear membrane;3.65689848195972e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;7.0039272532679e-11!GO:0000375;RNA splicing, via transesterification reactions;7.0039272532679e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.0039272532679e-11!GO:0051276;chromosome organization and biogenesis;7.41016942031338e-11!GO:0043228;non-membrane-bound organelle;7.60677153206267e-11!GO:0043232;intracellular non-membrane-bound organelle;7.60677153206267e-11!GO:0000502;proteasome complex (sensu Eukaryota);1.10888993815857e-10!GO:0008639;small protein conjugating enzyme activity;1.34400092441449e-10!GO:0005746;mitochondrial respiratory chain;1.44042314435472e-10!GO:0051170;nuclear import;1.81473615006433e-10!GO:0005794;Golgi apparatus;1.8423015938536e-10!GO:0031324;negative regulation of cellular metabolic process;2.07172121748515e-10!GO:0006606;protein import into nucleus;2.10128905664029e-10!GO:0004842;ubiquitin-protein ligase activity;2.14092387263165e-10!GO:0006457;protein folding;2.82387260412899e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.00111375862487e-10!GO:0003743;translation initiation factor activity;3.85908386991173e-10!GO:0006413;translational initiation;4.76757326814614e-10!GO:0005773;vacuole;6.16486312263551e-10!GO:0006446;regulation of translational initiation;6.24049045392902e-10!GO:0044453;nuclear membrane part;8.31385270575902e-10!GO:0050136;NADH dehydrogenase (quinone) activity;1.01583504176586e-09!GO:0003954;NADH dehydrogenase activity;1.01583504176586e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.01583504176586e-09!GO:0051726;regulation of cell cycle;1.04926999150628e-09!GO:0048522;positive regulation of cellular process;1.09195419426059e-09!GO:0016887;ATPase activity;1.1518026217114e-09!GO:0019787;small conjugating protein ligase activity;1.22910761200902e-09!GO:0016568;chromatin modification;1.3425171218735e-09!GO:0048193;Golgi vesicle transport;1.35345848830613e-09!GO:0006974;response to DNA damage stimulus;1.47540324519022e-09!GO:0000074;regulation of progression through cell cycle;1.62941337338025e-09!GO:0042623;ATPase activity, coupled;1.7489337896557e-09!GO:0043065;positive regulation of apoptosis;2.68966095608234e-09!GO:0045321;leukocyte activation;3.10149566786863e-09!GO:0010468;regulation of gene expression;3.30312229500763e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.62907074639205e-09!GO:0009892;negative regulation of metabolic process;3.73480564551638e-09!GO:0016564;transcription repressor activity;3.85506742368886e-09!GO:0006417;regulation of translation;4.37978604972887e-09!GO:0043068;positive regulation of programmed cell death;4.7380521125751e-09!GO:0004386;helicase activity;5.02317112124698e-09!GO:0000323;lytic vacuole;5.72234986420836e-09!GO:0005764;lysosome;5.72234986420836e-09!GO:0050657;nucleic acid transport;8.40921531274315e-09!GO:0051236;establishment of RNA localization;8.40921531274315e-09!GO:0050658;RNA transport;8.40921531274315e-09!GO:0003713;transcription coactivator activity;1.07686525891899e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.10264815501384e-08!GO:0031980;mitochondrial lumen;1.10983193848857e-08!GO:0005759;mitochondrial matrix;1.10983193848857e-08!GO:0006403;RNA localization;1.34080823045958e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.53854358678014e-08!GO:0048518;positive regulation of biological process;1.5597472729995e-08!GO:0019829;cation-transporting ATPase activity;1.59604059548157e-08!GO:0006350;transcription;1.59898343344418e-08!GO:0019899;enzyme binding;1.68969827711824e-08!GO:0006917;induction of apoptosis;1.72075866504809e-08!GO:0008026;ATP-dependent helicase activity;1.99620193268289e-08!GO:0042775;organelle ATP synthesis coupled electron transport;2.00846548761354e-08!GO:0042773;ATP synthesis coupled electron transport;2.00846548761354e-08!GO:0016481;negative regulation of transcription;2.13832810976205e-08!GO:0016563;transcription activator activity;2.16013366218596e-08!GO:0046649;lymphocyte activation;2.24548054131117e-08!GO:0045786;negative regulation of progression through cell cycle;2.27205612781051e-08!GO:0006950;response to stress;2.498426611769e-08!GO:0005643;nuclear pore;2.89158449064583e-08!GO:0012502;induction of programmed cell death;3.07939569141394e-08!GO:0030964;NADH dehydrogenase complex (quinone);3.82790555944516e-08!GO:0045271;respiratory chain complex I;3.82790555944516e-08!GO:0005747;mitochondrial respiratory chain complex I;3.82790555944516e-08!GO:0009615;response to virus;5.15905233821713e-08!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.84078725787174e-08!GO:0016787;hydrolase activity;6.37294830019702e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.72726567685648e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.93622765924491e-08!GO:0006333;chromatin assembly or disassembly;7.95017653786872e-08!GO:0007264;small GTPase mediated signal transduction;8.19088244533364e-08!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.51183082097124e-08!GO:0009967;positive regulation of signal transduction;9.13793515278615e-08!GO:0051186;cofactor metabolic process;9.3618535385703e-08!GO:0031326;regulation of cellular biosynthetic process;9.69750019914314e-08!GO:0051082;unfolded protein binding;1.01579764756974e-07!GO:0016881;acid-amino acid ligase activity;1.05749001940091e-07!GO:0050790;regulation of catalytic activity;1.06673887375094e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.14176904437676e-07!GO:0022402;cell cycle process;1.18901235916378e-07!GO:0009889;regulation of biosynthetic process;1.21897148931658e-07!GO:0001775;cell activation;1.80591228163894e-07!GO:0051028;mRNA transport;2.3790740217909e-07!GO:0065004;protein-DNA complex assembly;2.42841574227832e-07!GO:0042110;T cell activation;3.25249974893583e-07!GO:0005770;late endosome;3.6249104011132e-07!GO:0008565;protein transporter activity;3.78498958088742e-07!GO:0006461;protein complex assembly;4.08843513920502e-07!GO:0032446;protein modification by small protein conjugation;4.66397874951599e-07!GO:0009259;ribonucleotide metabolic process;4.94649297512807e-07!GO:0015986;ATP synthesis coupled proton transport;5.25515857655334e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.25515857655334e-07!GO:0009966;regulation of signal transduction;5.64083341712135e-07!GO:0009152;purine ribonucleotide biosynthetic process;5.81866778712396e-07!GO:0008047;enzyme activator activity;6.59196013217356e-07!GO:0006281;DNA repair;6.75631650728227e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.18816250137858e-07!GO:0016567;protein ubiquitination;7.85851358874038e-07!GO:0009260;ribonucleotide biosynthetic process;7.85851358874038e-07!GO:0006164;purine nucleotide biosynthetic process;8.95872635970527e-07!GO:0009150;purine ribonucleotide metabolic process;9.38545158230355e-07!GO:0005783;endoplasmic reticulum;1.02497712535041e-06!GO:0009056;catabolic process;1.04458757495943e-06!GO:0004674;protein serine/threonine kinase activity;1.05166170177666e-06!GO:0060090;molecular adaptor activity;1.17247901093223e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.1724956254736e-06!GO:0006163;purine nucleotide metabolic process;1.27044688754722e-06!GO:0043566;structure-specific DNA binding;1.482917902814e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.53854576932127e-06!GO:0044440;endosomal part;1.65599454384595e-06!GO:0010008;endosome membrane;1.65599454384595e-06!GO:0003697;single-stranded DNA binding;1.79455533596132e-06!GO:0046930;pore complex;1.88612104229891e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.9112383087281e-06!GO:0003924;GTPase activity;2.05246680224877e-06!GO:0045449;regulation of transcription;2.30195342181864e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.53812142315259e-06!GO:0030695;GTPase regulator activity;2.55073507462851e-06!GO:0005525;GTP binding;2.55073507462851e-06!GO:0006732;coenzyme metabolic process;2.59477972228043e-06!GO:0005793;ER-Golgi intermediate compartment;3.12121663078295e-06!GO:0005694;chromosome;3.16097911917266e-06!GO:0008632;apoptotic program;3.17982637147906e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.36465978577836e-06!GO:0000785;chromatin;4.23102860576211e-06!GO:0065002;intracellular protein transport across a membrane;4.25689807147922e-06!GO:0048468;cell development;4.75598360566479e-06!GO:0032774;RNA biosynthetic process;4.87012757907528e-06!GO:0006351;transcription, DNA-dependent;4.96545878570886e-06!GO:0030532;small nuclear ribonucleoprotein complex;5.07667565504856e-06!GO:0005839;proteasome core complex (sensu Eukaryota);5.5887911537151e-06!GO:0006754;ATP biosynthetic process;5.68519269752719e-06!GO:0006753;nucleoside phosphate metabolic process;5.68519269752719e-06!GO:0030097;hemopoiesis;6.13715081760618e-06!GO:0006401;RNA catabolic process;6.85374906915661e-06!GO:0003714;transcription corepressor activity;7.06198805600643e-06!GO:0016740;transferase activity;8.3524096219877e-06!GO:0009142;nucleoside triphosphate biosynthetic process;8.6812142477837e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.6812142477837e-06!GO:0009719;response to endogenous stimulus;9.08645480473307e-06!GO:0042254;ribosome biogenesis and assembly;1.03394432707129e-05!GO:0005057;receptor signaling protein activity;1.04599190393742e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.13694611496733e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.13694611496733e-05!GO:0007265;Ras protein signal transduction;1.13694611496733e-05!GO:0016197;endosome transport;1.23064415396123e-05!GO:0009199;ribonucleoside triphosphate metabolic process;1.29995148517305e-05!GO:0002757;immune response-activating signal transduction;1.31443559399555e-05!GO:0046034;ATP metabolic process;1.33891617247278e-05!GO:0051168;nuclear export;1.4563247739752e-05!GO:0002764;immune response-regulating signal transduction;1.54549059268212e-05!GO:0048475;coated membrane;1.68512859781828e-05!GO:0030117;membrane coat;1.68512859781828e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.68512859781828e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.68512859781828e-05!GO:0009060;aerobic respiration;1.71674688384117e-05!GO:0045892;negative regulation of transcription, DNA-dependent;1.85644405774305e-05!GO:0044432;endoplasmic reticulum part;1.93376490949489e-05!GO:0001772;immunological synapse;2.01556239678943e-05!GO:0006402;mRNA catabolic process;2.24987612237241e-05!GO:0004298;threonine endopeptidase activity;2.31485004753562e-05!GO:0000151;ubiquitin ligase complex;2.31485004753562e-05!GO:0008270;zinc ion binding;2.42836822196339e-05!GO:0005774;vacuolar membrane;2.42836822196339e-05!GO:0030120;vesicle coat;2.61092132381991e-05!GO:0030662;coated vesicle membrane;2.61092132381991e-05!GO:0009141;nucleoside triphosphate metabolic process;2.73831244472652e-05!GO:0044427;chromosomal part;2.8407659086703e-05!GO:0003724;RNA helicase activity;3.13396415177249e-05!GO:0051336;regulation of hydrolase activity;3.27493593747667e-05!GO:0005070;SH3/SH2 adaptor activity;3.37643768873023e-05!GO:0045259;proton-transporting ATP synthase complex;3.43866657262385e-05!GO:0032561;guanyl ribonucleotide binding;3.50646612887272e-05!GO:0019001;guanyl nucleotide binding;3.50646612887272e-05!GO:0002429;immune response-activating cell surface receptor signaling pathway;3.8428850297342e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.10075966058184e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.16251967043025e-05!GO:0031252;leading edge;4.35625418410933e-05!GO:0002768;immune response-regulating cell surface receptor signaling pathway;4.47898546989181e-05!GO:0002520;immune system development;4.81585029835398e-05!GO:0016044;membrane organization and biogenesis;4.8614910981884e-05!GO:0006888;ER to Golgi vesicle-mediated transport;5.01686841219162e-05!GO:0005096;GTPase activator activity;5.43435946302799e-05!GO:0000245;spliceosome assembly;5.87226909220484e-05!GO:0009893;positive regulation of metabolic process;6.14426701160967e-05!GO:0005761;mitochondrial ribosome;6.75001256004467e-05!GO:0000313;organellar ribosome;6.75001256004467e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.75001256004467e-05!GO:0007050;cell cycle arrest;7.1434717623163e-05!GO:0006334;nucleosome assembly;7.69154766683676e-05!GO:0005083;small GTPase regulator activity;7.84064825006507e-05!GO:0046822;regulation of nucleocytoplasmic transport;8.17027784747062e-05!GO:0051090;regulation of transcription factor activity;8.19526191734624e-05!GO:0006355;regulation of transcription, DNA-dependent;8.27700472100139e-05!GO:0016301;kinase activity;8.41615776304728e-05!GO:0001816;cytokine production;8.52127850395688e-05!GO:0009607;response to biotic stimulus;9.04003651319548e-05!GO:0031497;chromatin assembly;9.16310491256078e-05!GO:0005765;lysosomal membrane;9.21391839910444e-05!GO:0016773;phosphotransferase activity, alcohol group as acceptor;9.55115881095254e-05!GO:0044437;vacuolar part;9.94324779120715e-05!GO:0009055;electron carrier activity;0.000107318729128398!GO:0051188;cofactor biosynthetic process;0.000108865411315722!GO:0031982;vesicle;0.000115140878373608!GO:0051251;positive regulation of lymphocyte activation;0.000125038988440094!GO:0006468;protein amino acid phosphorylation;0.000126452171691278!GO:0051223;regulation of protein transport;0.000155504142111313!GO:0005769;early endosome;0.000159260593938831!GO:0045333;cellular respiration;0.000165153903217025!GO:0048534;hemopoietic or lymphoid organ development;0.000184402519237261!GO:0031902;late endosome membrane;0.00020203217864951!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000214149089458204!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000216725472757603!GO:0006613;cotranslational protein targeting to membrane;0.000226650229854966!GO:0001819;positive regulation of cytokine production;0.000231482335242473!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000251504775399372!GO:0003729;mRNA binding;0.000260274719844979!GO:0005789;endoplasmic reticulum membrane;0.000266308246968017!GO:0032940;secretion by cell;0.00027478756910174!GO:0005885;Arp2/3 protein complex;0.000276238282652493!GO:0009108;coenzyme biosynthetic process;0.000279320226937597!GO:0008186;RNA-dependent ATPase activity;0.000283477028132608!GO:0007005;mitochondrion organization and biogenesis;0.000284405627899465!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000292323784043376!GO:0015399;primary active transmembrane transporter activity;0.000292323784043376!GO:0044431;Golgi apparatus part;0.000298144942653314!GO:0008234;cysteine-type peptidase activity;0.000327316800068363!GO:0005813;centrosome;0.000333501056677501!GO:0051338;regulation of transferase activity;0.000376775683092336!GO:0042101;T cell receptor complex;0.000388248250544226!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000424375716192981!GO:0002521;leukocyte differentiation;0.000437963962984104!GO:0031410;cytoplasmic vesicle;0.000440340978265146!GO:0001817;regulation of cytokine production;0.000452073110976065!GO:0006752;group transfer coenzyme metabolic process;0.000452073110976065!GO:0022415;viral reproductive process;0.000455097191428815!GO:0045941;positive regulation of transcription;0.000459491317276989!GO:0006399;tRNA metabolic process;0.000466455603142729!GO:0016072;rRNA metabolic process;0.000482664367288441!GO:0043623;cellular protein complex assembly;0.000482893503371545!GO:0006099;tricarboxylic acid cycle;0.000482893503371545!GO:0046356;acetyl-CoA catabolic process;0.000482893503371545!GO:0031988;membrane-bound vesicle;0.000491241883155001!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000524399229990289!GO:0006919;caspase activation;0.000530637168686346!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000535824476578509!GO:0004812;aminoacyl-tRNA ligase activity;0.000535824476578509!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000535824476578509!GO:0051427;hormone receptor binding;0.00054801736785538!GO:0006364;rRNA processing;0.000552991386721226!GO:0043549;regulation of kinase activity;0.000598568657134481!GO:0050851;antigen receptor-mediated signaling pathway;0.000605670019736941!GO:0018193;peptidyl-amino acid modification;0.000627238514115153!GO:0006260;DNA replication;0.000643747854368983!GO:0016363;nuclear matrix;0.000655362629425902!GO:0033157;regulation of intracellular protein transport;0.000656393294746525!GO:0042306;regulation of protein import into nucleus;0.000656393294746525!GO:0031325;positive regulation of cellular metabolic process;0.000679442631655189!GO:0043281;regulation of caspase activity;0.000711344100988196!GO:0046914;transition metal ion binding;0.000737336823810486!GO:0008654;phospholipid biosynthetic process;0.000795309253601122!GO:0005798;Golgi-associated vesicle;0.000800602961134589!GO:0004004;ATP-dependent RNA helicase activity;0.000828731060915564!GO:0030099;myeloid cell differentiation;0.000843678470415621!GO:0016779;nucleotidyltransferase activity;0.00085999065719443!GO:0006607;NLS-bearing substrate import into nucleus;0.000865111872594542!GO:0005667;transcription factor complex;0.000906158405984967!GO:0043038;amino acid activation;0.000932775880760854!GO:0006418;tRNA aminoacylation for protein translation;0.000932775880760854!GO:0043039;tRNA aminoacylation;0.000932775880760854!GO:0043280;positive regulation of caspase activity;0.00094206226233785!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000953454105612077!GO:0035257;nuclear hormone receptor binding;0.000968533304650427!GO:0045637;regulation of myeloid cell differentiation;0.00108585271115405!GO:0046983;protein dimerization activity;0.00109007047874207!GO:0005637;nuclear inner membrane;0.00113695928107656!GO:0016023;cytoplasmic membrane-bound vesicle;0.00114394685809955!GO:0045859;regulation of protein kinase activity;0.0012164883111698!GO:0006084;acetyl-CoA metabolic process;0.00125091287406217!GO:0006611;protein export from nucleus;0.00125945038524021!GO:0051187;cofactor catabolic process;0.0013339630095912!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00135145846784108!GO:0043492;ATPase activity, coupled to movement of substances;0.00137725430425037!GO:0001726;ruffle;0.00140697357237717!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00149478024434697!GO:0005815;microtubule organizing center;0.00151089422760103!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00151362370658281!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00152856966430694!GO:0051092;activation of NF-kappaB transcription factor;0.00159654894879655!GO:0030217;T cell differentiation;0.00159834226459095!GO:0045045;secretory pathway;0.00166691027875979!GO:0042113;B cell activation;0.00167995274776961!GO:0045893;positive regulation of transcription, DNA-dependent;0.001713166346201!GO:0000278;mitotic cell cycle;0.00172680033279545!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00181534191337721!GO:0042990;regulation of transcription factor import into nucleus;0.00189919198043348!GO:0042991;transcription factor import into nucleus;0.00189919198043348!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.00195616537029488!GO:0048471;perinuclear region of cytoplasm;0.00205922533599823!GO:0030098;lymphocyte differentiation;0.00205922533599823!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00207467046930351!GO:0003690;double-stranded DNA binding;0.0021318740785117!GO:0043087;regulation of GTPase activity;0.0021318740785117!GO:0009117;nucleotide metabolic process;0.00217333592384347!GO:0019904;protein domain specific binding;0.00217493958371972!GO:0022890;inorganic cation transmembrane transporter activity;0.00228050165692558!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00246383246775915!GO:0050865;regulation of cell activation;0.00248050021316012!GO:0050870;positive regulation of T cell activation;0.00252216761082449!GO:0002274;myeloid leukocyte activation;0.00255119710789837!GO:0009109;coenzyme catabolic process;0.00278907821679047!GO:0042802;identical protein binding;0.00282486443789744!GO:0043433;negative regulation of transcription factor activity;0.00287144073987883!GO:0006897;endocytosis;0.00294992147075766!GO:0010324;membrane invagination;0.00294992147075766!GO:0005741;mitochondrial outer membrane;0.00298117376456961!GO:0006891;intra-Golgi vesicle-mediated transport;0.00306869331020878!GO:0051249;regulation of lymphocyte activation;0.00324751896108606!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00324751896108606!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00324751896108606!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00324751896108606!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00330134466982926!GO:0030258;lipid modification;0.00336339760916953!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00336339760916953!GO:0008624;induction of apoptosis by extracellular signals;0.00340775026058279!GO:0007034;vacuolar transport;0.00347497725836658!GO:0006612;protein targeting to membrane;0.00347808899557575!GO:0043021;ribonucleoprotein binding;0.00360877560840254!GO:0030658;transport vesicle membrane;0.00363994577048114!GO:0006818;hydrogen transport;0.00367507859217453!GO:0030384;phosphoinositide metabolic process;0.00374718424523673!GO:0051049;regulation of transport;0.00375285824925762!GO:0045058;T cell selection;0.00395717974015915!GO:0051707;response to other organism;0.0039663156617728!GO:0003725;double-stranded RNA binding;0.004031060123796!GO:0006650;glycerophospholipid metabolic process;0.00404821965327434!GO:0015992;proton transport;0.00417972107474571!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00419300785053396!GO:0050871;positive regulation of B cell activation;0.00440785416121822!GO:0002252;immune effector process;0.00456039389866205!GO:0006352;transcription initiation;0.00459527743670659!GO:0003677;DNA binding;0.00467658663420877!GO:0030218;erythrocyte differentiation;0.00467665128279071!GO:0051252;regulation of RNA metabolic process;0.00489629688716553!GO:0051091;positive regulation of transcription factor activity;0.00496155442600678!GO:0019220;regulation of phosphate metabolic process;0.00500643305182869!GO:0051174;regulation of phosphorus metabolic process;0.00500643305182869!GO:0033116;ER-Golgi intermediate compartment membrane;0.00500643305182869!GO:0004722;protein serine/threonine phosphatase activity;0.00503881053246605!GO:0000139;Golgi membrane;0.00506871639234986!GO:0005099;Ras GTPase activator activity;0.00535494146036354!GO:0030118;clathrin coat;0.00542637122017737!GO:0006310;DNA recombination;0.00552565927904771!GO:0008287;protein serine/threonine phosphatase complex;0.00570024607160039!GO:0016584;nucleosome positioning;0.0057426220937545!GO:0016251;general RNA polymerase II transcription factor activity;0.00574293388870654!GO:0019867;outer membrane;0.00576534337478146!GO:0006414;translational elongation;0.00576534337478146!GO:0002440;production of molecular mediator of immune response;0.00581289774765491!GO:0017091;AU-rich element binding;0.00589613325944737!GO:0050779;RNA destabilization;0.00589613325944737!GO:0000289;poly(A) tail shortening;0.00589613325944737!GO:0015631;tubulin binding;0.0059118401344187!GO:0008637;apoptotic mitochondrial changes;0.00591218522967119!GO:0031625;ubiquitin protein ligase binding;0.00606974733172713!GO:0030036;actin cytoskeleton organization and biogenesis;0.00616402820772315!GO:0016791;phosphoric monoester hydrolase activity;0.00626656348957971!GO:0031968;organelle outer membrane;0.00626656348957971!GO:0019901;protein kinase binding;0.00628452707428879!GO:0042613;MHC class II protein complex;0.00649140440727675!GO:0051098;regulation of binding;0.006620512818565!GO:0032318;regulation of Ras GTPase activity;0.00673443474646594!GO:0032386;regulation of intracellular transport;0.00686832805842392!GO:0051345;positive regulation of hydrolase activity;0.00699466064202518!GO:0043300;regulation of leukocyte degranulation;0.00736517023504253!GO:0045646;regulation of erythrocyte differentiation;0.00741223429130882!GO:0008629;induction of apoptosis by intracellular signals;0.00741223429130882!GO:0007041;lysosomal transport;0.00741597362797428!GO:0008139;nuclear localization sequence binding;0.00758116184575174!GO:0016311;dephosphorylation;0.00767411673437046!GO:0006672;ceramide metabolic process;0.00772626135561444!GO:0043488;regulation of mRNA stability;0.00781391244104595!GO:0043487;regulation of RNA stability;0.00781391244104595!GO:0019882;antigen processing and presentation;0.00808013303361525!GO:0019843;rRNA binding;0.00846464367021343!GO:0045792;negative regulation of cell size;0.00846464367021343!GO:0050900;leukocyte migration;0.0084991654808389!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00853775195208764!GO:0004672;protein kinase activity;0.00853817297028662!GO:0046519;sphingoid metabolic process;0.00906090147547793!GO:0006405;RNA export from nucleus;0.0090791027480849!GO:0004185;serine carboxypeptidase activity;0.00947535842568109!GO:0045576;mast cell activation;0.00948219068921021!GO:0030041;actin filament polymerization;0.00948219068921021!GO:0030660;Golgi-associated vesicle membrane;0.0098137138229909!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0098137138229909!GO:0002819;regulation of adaptive immune response;0.0098137138229909!GO:0033673;negative regulation of kinase activity;0.0098137138229909!GO:0006469;negative regulation of protein kinase activity;0.0098137138229909!GO:0007259;JAK-STAT cascade;0.0098137138229909!GO:0030308;negative regulation of cell growth;0.0098137138229909!GO:0003746;translation elongation factor activity;0.00998520719789048!GO:0051789;response to protein stimulus;0.0101238269581555!GO:0006986;response to unfolded protein;0.0101238269581555!GO:0043085;positive regulation of catalytic activity;0.0102798083744387!GO:0005684;U2-dependent spliceosome;0.0104466719386434!GO:0031072;heat shock protein binding;0.0105684513224443!GO:0046966;thyroid hormone receptor binding;0.0106224415051889!GO:0043299;leukocyte degranulation;0.0108995240752144!GO:0000209;protein polyubiquitination;0.0110658010879381!GO:0050863;regulation of T cell activation;0.0112351840752537!GO:0031901;early endosome membrane;0.0113577942266364!GO:0002443;leukocyte mediated immunity;0.0114993333358493!GO:0019210;kinase inhibitor activity;0.0115515531394873!GO:0007040;lysosome organization and biogenesis;0.0121087122864905!GO:0005669;transcription factor TFIID complex;0.0122467421650203!GO:0006643;membrane lipid metabolic process;0.0124485673819717!GO:0019079;viral genome replication;0.0126510346929121!GO:0045926;negative regulation of growth;0.0130898757489245!GO:0006261;DNA-dependent DNA replication;0.0131377967451296!GO:0005048;signal sequence binding;0.013495165955908!GO:0051235;maintenance of localization;0.0134992176394374!GO:0004860;protein kinase inhibitor activity;0.0135074576899224!GO:0051348;negative regulation of transferase activity;0.0135819538130023!GO:0051059;NF-kappaB binding;0.0137571777820673!GO:0019058;viral infectious cycle;0.0138806894374325!GO:0008017;microtubule binding;0.0138806894374325!GO:0046578;regulation of Ras protein signal transduction;0.0138896430496966!GO:0051329;interphase of mitotic cell cycle;0.0139253454476056!GO:0045603;positive regulation of endothelial cell differentiation;0.0142219162828249!GO:0030518;steroid hormone receptor signaling pathway;0.0142219162828249!GO:0001516;prostaglandin biosynthetic process;0.014330887976795!GO:0046457;prostanoid biosynthetic process;0.014330887976795!GO:0019783;small conjugating protein-specific protease activity;0.0145809082440072!GO:0004177;aminopeptidase activity;0.0147927663268132!GO:0048487;beta-tubulin binding;0.0147927663268132!GO:0051051;negative regulation of transport;0.0147927663268132!GO:0030674;protein binding, bridging;0.0151709641079489!GO:0000118;histone deacetylase complex;0.0153635531374064!GO:0004197;cysteine-type endopeptidase activity;0.0159227086343978!GO:0000165;MAPKKK cascade;0.016016259664061!GO:0043621;protein self-association;0.0162442821710229!GO:0046467;membrane lipid biosynthetic process;0.016615982395957!GO:0015923;mannosidase activity;0.0166320009305613!GO:0019900;kinase binding;0.0166878003114584!GO:0031098;stress-activated protein kinase signaling pathway;0.0168174886482712!GO:0006376;mRNA splice site selection;0.0169595778883337!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0169595778883337!GO:0048500;signal recognition particle;0.0171080839928622!GO:0050811;GABA receptor binding;0.0171080839928622!GO:0045746;negative regulation of Notch signaling pathway;0.0174988812092885!GO:0019883;antigen processing and presentation of endogenous antigen;0.0175223398366872!GO:0002467;germinal center formation;0.0177069012132705!GO:0042108;positive regulation of cytokine biosynthetic process;0.0180062324347322!GO:0002444;myeloid leukocyte mediated immunity;0.0181940749509669!GO:0016505;apoptotic protease activator activity;0.018531849241869!GO:0003711;transcription elongation regulator activity;0.0188212616663281!GO:0004843;ubiquitin-specific protease activity;0.0191560632469791!GO:0002250;adaptive immune response;0.0193159886564953!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0193159886564953!GO:0000786;nucleosome;0.0194946775281638!GO:0046474;glycerophospholipid biosynthetic process;0.0195402412382422!GO:0051325;interphase;0.0195424214835339!GO:0002682;regulation of immune system process;0.0195424214835339!GO:0000082;G1/S transition of mitotic cell cycle;0.0202762109435767!GO:0006338;chromatin remodeling;0.0202762109435767!GO:0033367;protein localization in mast cell secretory granule;0.0202762109435767!GO:0033365;protein localization in organelle;0.0202762109435767!GO:0033371;T cell secretory granule organization and biogenesis;0.0202762109435767!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0202762109435767!GO:0033375;protease localization in T cell secretory granule;0.0202762109435767!GO:0042629;mast cell granule;0.0202762109435767!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0202762109435767!GO:0033364;mast cell secretory granule organization and biogenesis;0.0202762109435767!GO:0033380;granzyme B localization in T cell secretory granule;0.0202762109435767!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0202762109435767!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0202762109435767!GO:0033368;protease localization in mast cell secretory granule;0.0202762109435767!GO:0033366;protein localization in secretory granule;0.0202762109435767!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0202762109435767!GO:0033374;protein localization in T cell secretory granule;0.0202762109435767!GO:0032763;regulation of mast cell cytokine production;0.0206051902346349!GO:0032762;mast cell cytokine production;0.0206051902346349!GO:0006984;ER-nuclear signaling pathway;0.0208117183610374!GO:0015630;microtubule cytoskeleton;0.0208502146847474!GO:0045069;regulation of viral genome replication;0.0212644303609528!GO:0046489;phosphoinositide biosynthetic process;0.0213180316564322!GO:0043304;regulation of mast cell degranulation;0.0213516104549651!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0215619102356708!GO:0016585;chromatin remodeling complex;0.0217974436937786!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0220207793018889!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0220207793018889!GO:0030867;rough endoplasmic reticulum membrane;0.0226283122635664!GO:0051056;regulation of small GTPase mediated signal transduction;0.0227164956954613!GO:0051050;positive regulation of transport;0.0227764760221968!GO:0030127;COPII vesicle coat;0.0232170310789097!GO:0012507;ER to Golgi transport vesicle membrane;0.0232170310789097!GO:0006968;cellular defense response;0.0234348833732943!GO:0007033;vacuole organization and biogenesis;0.0237265108775399!GO:0005521;lamin binding;0.0244378346422264!GO:0001836;release of cytochrome c from mitochondria;0.0247041718925608!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0251700384960698!GO:0043681;protein import into mitochondrion;0.0252425696095861!GO:0017166;vinculin binding;0.0252690812226902!GO:0042325;regulation of phosphorylation;0.0253279714335007!GO:0006595;polyamine metabolic process;0.0253682128258265!GO:0003702;RNA polymerase II transcription factor activity;0.0254322962650577!GO:0047485;protein N-terminus binding;0.0259259361740793!GO:0050864;regulation of B cell activation;0.02619469879553!GO:0030176;integral to endoplasmic reticulum membrane;0.0262608265310308!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.026592028368714!GO:0000287;magnesium ion binding;0.026592028368714!GO:0009165;nucleotide biosynthetic process;0.0266449066226597!GO:0006354;RNA elongation;0.0270145540423036!GO:0030119;AP-type membrane coat adaptor complex;0.0275429434015545!GO:0043022;ribosome binding;0.0275863607690891!GO:0046854;phosphoinositide phosphorylation;0.0279240148173493!GO:0050857;positive regulation of antigen receptor-mediated signaling pathway;0.0285249715034085!GO:0006914;autophagy;0.0285444200960554!GO:0044262;cellular carbohydrate metabolic process;0.0288863481121137!GO:0002448;mast cell mediated immunity;0.0289907245647124!GO:0043303;mast cell degranulation;0.0289907245647124!GO:0007006;mitochondrial membrane organization and biogenesis;0.0292079900345491!GO:0045454;cell redox homeostasis;0.0294053778424676!GO:0030027;lamellipodium;0.0294627636977332!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0294627636977332!GO:0005762;mitochondrial large ribosomal subunit;0.0294627636977332!GO:0000315;organellar large ribosomal subunit;0.0294627636977332!GO:0007254;JNK cascade;0.029471571094348!GO:0042348;NF-kappaB import into nucleus;0.0299793274728493!GO:0042345;regulation of NF-kappaB import into nucleus;0.0299793274728493!GO:0000303;response to superoxide;0.0300957704677832!GO:0005869;dynactin complex;0.0301955731018796!GO:0005791;rough endoplasmic reticulum;0.0302504788410933!GO:0030134;ER to Golgi transport vesicle;0.0310100452837841!GO:0045309;protein phosphorylated amino acid binding;0.0311132758172422!GO:0004221;ubiquitin thiolesterase activity;0.0311665397292871!GO:0030521;androgen receptor signaling pathway;0.0320774543534611!GO:0016605;PML body;0.0322161983242364!GO:0043407;negative regulation of MAP kinase activity;0.0322161983242364!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0322546307080161!GO:0045047;protein targeting to ER;0.0322546307080161!GO:0008312;7S RNA binding;0.0322706026810186!GO:0030131;clathrin adaptor complex;0.0325173114007687!GO:0003682;chromatin binding;0.0326809523164751!GO:0042287;MHC protein binding;0.0329559985437446!GO:0045947;negative regulation of translational initiation;0.0334340425215806!GO:0030125;clathrin vesicle coat;0.0344616480778662!GO:0030665;clathrin coated vesicle membrane;0.0344616480778662!GO:0051052;regulation of DNA metabolic process;0.035047346556933!GO:0030029;actin filament-based process;0.0351476867916861!GO:0051101;regulation of DNA binding;0.0354081582538579!GO:0000059;protein import into nucleus, docking;0.0361619471523063!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.036178756246773!GO:0030149;sphingolipid catabolic process;0.0363871479355451!GO:0030522;intracellular receptor-mediated signaling pathway;0.0369135863100931!GO:0050671;positive regulation of lymphocyte proliferation;0.0374468471508868!GO:0032946;positive regulation of mononuclear cell proliferation;0.0374468471508868!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0374510067492789!GO:0001667;ameboidal cell migration;0.0375935043882412!GO:0032027;myosin light chain binding;0.0375935043882412!GO:0006213;pyrimidine nucleoside metabolic process;0.0376759330298687!GO:0033239;negative regulation of amine metabolic process;0.038004675828049!GO:0045763;negative regulation of amino acid metabolic process;0.038004675828049!GO:0001933;negative regulation of protein amino acid phosphorylation;0.038004675828049!GO:0009299;mRNA transcription;0.0383760392312084!GO:0045113;regulation of integrin biosynthetic process;0.0383760392312084!GO:0045112;integrin biosynthetic process;0.0383760392312084!GO:0046834;lipid phosphorylation;0.0391127928031857!GO:0004218;cathepsin S activity;0.0392470691540533!GO:0006007;glucose catabolic process;0.0399510523301686!GO:0004721;phosphoprotein phosphatase activity;0.0405114618594688!GO:0050776;regulation of immune response;0.0405972210484298!GO:0009891;positive regulation of biosynthetic process;0.0407711132174137!GO:0002218;activation of innate immune response;0.0411873662318075!GO:0002758;innate immune response-activating signal transduction;0.0411873662318075!GO:0004527;exonuclease activity;0.0413140638038406!GO:0008656;caspase activator activity;0.0414212010610253!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0417656969064272!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0419300690950189!GO:0043506;regulation of JNK activity;0.0419300690950189!GO:0050852;T cell receptor signaling pathway;0.0420433882416557!GO:0001784;phosphotyrosine binding;0.0422963026982354!GO:0046456;icosanoid biosynthetic process;0.0423257824286474!GO:0002237;response to molecule of bacterial origin;0.0429714433989661!GO:0000060;protein import into nucleus, translocation;0.0431459330774716!GO:0040029;regulation of gene expression, epigenetic;0.0433660354538044!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0435255622972151!GO:0051087;chaperone binding;0.0444138251630578!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0451194629972633!GO:0005484;SNAP receptor activity;0.0456230431722852!GO:0030100;regulation of endocytosis;0.0458149292699707!GO:0051247;positive regulation of protein metabolic process;0.0459598578150434!GO:0048872;homeostasis of number of cells;0.0460407407599422!GO:0045185;maintenance of protein localization;0.0460407407599422!GO:0006470;protein amino acid dephosphorylation;0.0463018959463461!GO:0048002;antigen processing and presentation of peptide antigen;0.0463068909689769!GO:0032760;positive regulation of tumor necrosis factor production;0.0463692466389168!GO:0006302;double-strand break repair;0.0467573694149253!GO:0006644;phospholipid metabolic process;0.0468163665523099!GO:0016566;specific transcriptional repressor activity;0.0468163665523099!GO:0022411;cellular component disassembly;0.0474125009453036!GO:0045086;positive regulation of interleukin-2 biosynthetic process;0.0475244196694539!GO:0006383;transcription from RNA polymerase III promoter;0.0477101347410707!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0477301926007624!GO:0030132;clathrin coat of coated pit;0.0478284739135933!GO:0016788;hydrolase activity, acting on ester bonds;0.0478284739135933!GO:0008286;insulin receptor signaling pathway;0.0480071069562409!GO:0006516;glycoprotein catabolic process;0.0489985283726143!GO:0046839;phospholipid dephosphorylation;0.0491345277626263!GO:0050792;regulation of viral reproduction;0.0492370126015083!GO:0042992;negative regulation of transcription factor import into nucleus;0.0497380620359552!GO:0042308;negative regulation of protein import into nucleus;0.0497380620359552!GO:0008097;5S rRNA binding;0.0497380620359552!GO:0030833;regulation of actin filament polymerization;0.0498504032388759!GO:0006661;phosphatidylinositol biosynthetic process;0.0498634984056183
|sample_id=11312
|sample_id=11312
|sample_note=
|sample_note=
Line 76: Line 105:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=RUNX1..3:3.44021910671;ETS1,2:3.37024871142;PAX3,7:3.26353505301;NFKB1_REL_RELA:3.11810917673;SPI1:3.05998085384;ATF5_CREB3:3.04664930938;SPIB:2.95990958733;PAX2:2.930717661;DMAP1_NCOR{1,2}_SMARC:2.76845300942;ATF4:2.72940166107;CREB1:2.70375909855;FOX{D1,D2}:2.4827541483;FOXO1,3,4:2.37466477617;CEBPA,B_DDIT3:2.3370116932;NFIL3:2.19671549292;ELF1,2,4:2.12798683104;RXRA_VDR{dimer}:2.07982786769;FOXN1:2.07909124546;TGIF1:2.03636026601;BACH2:2.00869726209;BPTF:1.89107450028;FOS_FOS{B,L1}_JUN{B,D}:1.89089071045;JUN:1.86043128363;PITX1..3:1.85145196116;MAFB:1.81495267096;HMX1:1.80378511757;IRF1,2:1.78766222754;HIF1A:1.76698237528;RFX2..5_RFXANK_RFXAP:1.71457014925;NANOG{mouse}:1.70170748058;HLF:1.66803680778;FOXP1:1.61228118854;FOSL2:1.58298241647;NFATC1..3:1.56270948612;FOX{F1,F2,J1}:1.54167789009;NFE2:1.49534495746;FOXP3:1.45935031757;RORA:1.42021104915;T:1.41120382529;IRF7:1.34316249957;EP300:1.30093120498;ATF2:1.26564207501;ATF6:1.18659730415;STAT2,4,6:0.989994086398;SREBF1,2:0.955362139809;NFE2L1:0.933296742471;HMGA1,2:0.928948727679;NKX2-1,4:0.819216367352;NFE2L2:0.722428565332;IKZF2:0.675054493104;TLX2:0.642830020691;SMAD1..7,9:0.476961605262;ZBTB16:0.347738961105;TOPORS:0.248992048781;CDX1,2,4:0.238685993885;BREu{core}:0.210462292733;PAX8:0.209614417507;NKX3-1:0.164981558513;POU2F1..3:0.155520687925;EGR1..3:0.151919284108;SPZ1:0.123830394637;GATA4:0.0866364301964;GLI1..3:0.0801294148501;RBPJ:0.0426300311917;HOXA9_MEIS1:0.0219330748046;FOXD3:0.00574397006742;PAX6:0.0037326474389;MYFfamily:-0.0813955772401;RFX1:-0.102386293584;HBP1_HMGB_SSRP1_UBTF:-0.11538235627;NR5A1,2:-0.132965745809;SOX2:-0.201801579293;PPARG:-0.202471230278;RXR{A,B,G}:-0.245528056268;AHR_ARNT_ARNT2:-0.248496156775;TBX4,5:-0.257996236501;MYB:-0.258172755068;FOXL1:-0.288301315419;HES1:-0.305139230577;ALX4:-0.306208226372;NKX6-1,2:-0.31474751438;MEF2{A,B,C,D}:-0.32229118406;XBP1:-0.327846942146;TFAP4:-0.329311234494;POU5F1:-0.331549210037;GATA6:-0.342688677694;HSF1,2:-0.406853670828;TAL1_TCF{3,4,12}:-0.478274097956;FOX{I1,J2}:-0.496082597172;ZEB1:-0.506366364427;AIRE:-0.515064609949;NANOG:-0.525825587693;STAT1,3:-0.55791815107;MZF1:-0.560877943856;TFCP2:-0.57030029231;SRF:-0.579391649558;ESR1:-0.608234958105;OCT4_SOX2{dimer}:-0.610167634714;PDX1:-0.62005680097;NR1H4:-0.630267154188;ESRRA:-0.643644761662;PATZ1:-0.668067139525;MTE{core}:-0.669314892067;NR6A1:-0.772924333338;GCM1,2:-0.781225850816;STAT5{A,B}:-0.7888336054;E2F1..5:-0.792628801286;ZFP161:-0.797646449177;HNF4A_NR2F1,2:-0.800706599133;PAX5:-0.81560851037;ZNF384:-0.853100983418;ZNF238:-0.862323210048;NHLH1,2:-0.864484068197;RREB1:-0.868752857633;MED-1{core}:-0.87961744248;TFAP2{A,C}:-0.889949383417;SOX5:-0.903879385985;SNAI1..3:-0.909037440384;MTF1:-0.914802627101;SP1:-0.950223774507;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.01668211947;PRDM1:-1.042597941;EN1,2:-1.04423520655;TFAP2B:-1.05441213327;PAX4:-1.06494192643;MYOD1:-1.08404246368;HOX{A5,B5}:-1.09771091982;REST:-1.10546857186;LEF1_TCF7_TCF7L1,2:-1.1161617214;DBP:-1.1315719251;HNF1A:-1.18683376928;ZNF148:-1.19849867765;ZNF423:-1.20989616917;NFIX:-1.25199117346;FOXA2:-1.28509088374;HIC1:-1.28612608858;PRRX1,2:-1.30164562514;NFY{A,B,C}:-1.31874463508;TFDP1:-1.32374275746;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.33284470934;MAZ:-1.34970352374;ELK1,4_GABP{A,B1}:-1.35015883587;FOXQ1:-1.35429335117;LMO2:-1.36108620747;VSX1,2:-1.42945358161;TBP:-1.43865056955;FOXM1:-1.44099169907;SOX{8,9,10}:-1.50595502912;EVI1:-1.52580460323;ZBTB6:-1.54837690025;IKZF1:-1.56236279998;AR:-1.58325868587;CUX2:-1.63953636732;NRF1:-1.66976596251;XCPE1{core}:-1.70902821802;EBF1:-1.71408692635;POU6F1:-1.77476427621;bHLH_family:-1.77765571696;GTF2I:-1.79393578629;ADNP_IRX_SIX_ZHX:-1.80085269705;PBX1:-1.81182191728;NR3C1:-1.81990220457;GZF1:-1.85206692129;GTF2A1,2:-1.87352901398;ZIC1..3:-1.91993986617;MYBL2:-1.94971503699;KLF4:-1.9498791639;TLX1..3_NFIC{dimer}:-1.95649486959;TEF:-1.96683575546;PAX1,9:-1.9704119109;TEAD1:-2.02240065551;CRX:-2.02753245573;TP53:-2.02902096338;UFEwm:-2.05050614285;NKX2-2,8:-2.05537015804;GFI1B:-2.05747316473;HOX{A6,A7,B6,B7}:-2.11302740137;YY1:-2.15884479243;ALX1:-2.18867786221;POU3F1..4:-2.22491979917;GFI1:-2.24889816681;ZNF143:-2.28819798694;NKX3-2:-2.343653296;LHX3,4:-2.34956176133;CDC5L:-2.35226568241;NKX2-3_NKX2-5:-2.40800299149;SOX17:-2.60046815588;ONECUT1,2:-2.66350627051;ARID5B:-2.74493577673;HAND1,2:-3.03987534493;HOX{A4,D4}:-3.05340710863;POU1F1:-3.06723133827
|top_motifs=RUNX1..3:3.44021910671;ETS1,2:3.37024871142;PAX3,7:3.26353505301;NFKB1_REL_RELA:3.11810917673;SPI1:3.05998085384;ATF5_CREB3:3.04664930938;SPIB:2.95990958733;PAX2:2.930717661;DMAP1_NCOR{1,2}_SMARC:2.76845300942;ATF4:2.72940166107;CREB1:2.70375909855;FOX{D1,D2}:2.4827541483;FOXO1,3,4:2.37466477617;CEBPA,B_DDIT3:2.3370116932;NFIL3:2.19671549292;ELF1,2,4:2.12798683104;RXRA_VDR{dimer}:2.07982786769;FOXN1:2.07909124546;TGIF1:2.03636026601;BACH2:2.00869726209;BPTF:1.89107450028;FOS_FOS{B,L1}_JUN{B,D}:1.89089071045;JUN:1.86043128363;PITX1..3:1.85145196116;MAFB:1.81495267096;HMX1:1.80378511757;IRF1,2:1.78766222754;HIF1A:1.76698237528;RFX2..5_RFXANK_RFXAP:1.71457014925;NANOG{mouse}:1.70170748058;HLF:1.66803680778;FOXP1:1.61228118854;FOSL2:1.58298241647;NFATC1..3:1.56270948612;FOX{F1,F2,J1}:1.54167789009;NFE2:1.49534495746;FOXP3:1.45935031757;RORA:1.42021104915;T:1.41120382529;IRF7:1.34316249957;EP300:1.30093120498;ATF2:1.26564207501;ATF6:1.18659730415;STAT2,4,6:0.989994086398;SREBF1,2:0.955362139809;NFE2L1:0.933296742471;HMGA1,2:0.928948727679;NKX2-1,4:0.819216367352;NFE2L2:0.722428565332;IKZF2:0.675054493104;TLX2:0.642830020691;SMAD1..7,9:0.476961605262;ZBTB16:0.347738961105;TOPORS:0.248992048781;CDX1,2,4:0.238685993885;BREu{core}:0.210462292733;PAX8:0.209614417507;NKX3-1:0.164981558513;POU2F1..3:0.155520687925;EGR1..3:0.151919284108;SPZ1:0.123830394637;GATA4:0.0866364301964;GLI1..3:0.0801294148501;RBPJ:0.0426300311917;HOXA9_MEIS1:0.0219330748046;FOXD3:0.00574397006742;PAX6:0.0037326474389;MYFfamily:-0.0813955772401;RFX1:-0.102386293584;HBP1_HMGB_SSRP1_UBTF:-0.11538235627;NR5A1,2:-0.132965745809;SOX2:-0.201801579293;PPARG:-0.202471230278;RXR{A,B,G}:-0.245528056268;AHR_ARNT_ARNT2:-0.248496156775;TBX4,5:-0.257996236501;MYB:-0.258172755068;FOXL1:-0.288301315419;HES1:-0.305139230577;ALX4:-0.306208226372;NKX6-1,2:-0.31474751438;MEF2{A,B,C,D}:-0.32229118406;XBP1:-0.327846942146;TFAP4:-0.329311234494;POU5F1:-0.331549210037;GATA6:-0.342688677694;HSF1,2:-0.406853670828;TAL1_TCF{3,4,12}:-0.478274097956;FOX{I1,J2}:-0.496082597172;ZEB1:-0.506366364427;AIRE:-0.515064609949;NANOG:-0.525825587693;STAT1,3:-0.55791815107;MZF1:-0.560877943856;TFCP2:-0.57030029231;SRF:-0.579391649558;ESR1:-0.608234958105;OCT4_SOX2{dimer}:-0.610167634714;PDX1:-0.62005680097;NR1H4:-0.630267154188;ESRRA:-0.643644761662;PATZ1:-0.668067139525;MTE{core}:-0.669314892067;NR6A1:-0.772924333338;GCM1,2:-0.781225850816;STAT5{A,B}:-0.7888336054;E2F1..5:-0.792628801286;ZFP161:-0.797646449177;HNF4A_NR2F1,2:-0.800706599133;PAX5:-0.81560851037;ZNF384:-0.853100983418;ZNF238:-0.862323210048;NHLH1,2:-0.864484068197;RREB1:-0.868752857633;MED-1{core}:-0.87961744248;TFAP2{A,C}:-0.889949383417;SOX5:-0.903879385985;SNAI1..3:-0.909037440384;MTF1:-0.914802627101;SP1:-0.950223774507;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.01668211947;PRDM1:-1.042597941;EN1,2:-1.04423520655;TFAP2B:-1.05441213327;PAX4:-1.06494192643;MYOD1:-1.08404246368;HOX{A5,B5}:-1.09771091982;REST:-1.10546857186;LEF1_TCF7_TCF7L1,2:-1.1161617214;DBP:-1.1315719251;HNF1A:-1.18683376928;ZNF148:-1.19849867765;ZNF423:-1.20989616917;NFIX:-1.25199117346;FOXA2:-1.28509088374;HIC1:-1.28612608858;PRRX1,2:-1.30164562514;NFY{A,B,C}:-1.31874463508;TFDP1:-1.32374275746;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.33284470934;MAZ:-1.34970352374;ELK1,4_GABP{A,B1}:-1.35015883587;FOXQ1:-1.35429335117;LMO2:-1.36108620747;VSX1,2:-1.42945358161;TBP:-1.43865056955;FOXM1:-1.44099169907;SOX{8,9,10}:-1.50595502912;EVI1:-1.52580460323;ZBTB6:-1.54837690025;IKZF1:-1.56236279998;AR:-1.58325868587;CUX2:-1.63953636732;NRF1:-1.66976596251;XCPE1{core}:-1.70902821802;EBF1:-1.71408692635;POU6F1:-1.77476427621;bHLH_family:-1.77765571696;GTF2I:-1.79393578629;ADNP_IRX_SIX_ZHX:-1.80085269705;PBX1:-1.81182191728;NR3C1:-1.81990220457;GZF1:-1.85206692129;GTF2A1,2:-1.87352901398;ZIC1..3:-1.91993986617;MYBL2:-1.94971503699;KLF4:-1.9498791639;TLX1..3_NFIC{dimer}:-1.95649486959;TEF:-1.96683575546;PAX1,9:-1.9704119109;TEAD1:-2.02240065551;CRX:-2.02753245573;TP53:-2.02902096338;UFEwm:-2.05050614285;NKX2-2,8:-2.05537015804;GFI1B:-2.05747316473;HOX{A6,A7,B6,B7}:-2.11302740137;YY1:-2.15884479243;ALX1:-2.18867786221;POU3F1..4:-2.22491979917;GFI1:-2.24889816681;ZNF143:-2.28819798694;NKX3-2:-2.343653296;LHX3,4:-2.34956176133;CDC5L:-2.35226568241;NKX2-3_NKX2-5:-2.40800299149;SOX17:-2.60046815588;ONECUT1,2:-2.66350627051;ARID5B:-2.74493577673;HAND1,2:-3.03987534493;HOX{A4,D4}:-3.05340710863;POU1F1:-3.06723133827
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11312-117C7;search_select_hide=table117:FF:11312-117C7
}}
}}

Latest revision as of 16:32, 3 June 2020

Name:Peripheral Blood Mononuclear Cells, donor2
Species:Human (Homo sapiens)
Library ID:CNhs11958
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stage65 years old adult
sexmale
age65
cell typemononuclear cell
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberPBMC722
catalog number3H100-10-10
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004994
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11958 CAGE DRX008402 DRR009274
Accession ID Hg19

Library idBAMCTSS
CNhs11958 DRZ000699 DRZ002084
Accession ID Hg38

Library idBAMCTSS
CNhs11958 DRZ012049 DRZ013434
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004994
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10005.CGTACG sRNA-Seq DRX037067 DRR041433
Accession ID Hg19

Library idBAMCTSS
SRhi10005.CGTACG DRZ007075


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0.169
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.156
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0776
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.247
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.292
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.514
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.555
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.271
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.4
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.475
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.528
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40.156
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0.217
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.692
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.481
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0.27
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.499
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0965
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.528
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.435
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.469
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.254
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.627
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.156
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.435
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.411
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0848
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.435
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0.0848
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.156
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.027
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.789
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.787
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.62
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.613
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.528
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0295
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.58
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.307
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.638
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.609
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.7
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.528
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.729
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.156
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.648
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.683
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.0848
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.469
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0.0848
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0.156
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.806
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0.435
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.128
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0.0848
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.0676
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.58
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340.318
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.361
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.318
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.361
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11958

Jaspar motifP-value
MA0002.29.79905e-12
MA0003.10.533
MA0004.10.875
MA0006.10.652
MA0007.10.988
MA0009.10.0943
MA0014.10.871
MA0017.10.639
MA0018.21.79131e-5
MA0019.10.231
MA0024.10.03
MA0025.14.4327e-4
MA0027.10.781
MA0028.10.408
MA0029.10.201
MA0030.10.0979
MA0031.10.0456
MA0035.20.538
MA0038.10.106
MA0039.20.675
MA0040.10.494
MA0041.10.4
MA0042.10.801
MA0043.11.17252e-10
MA0046.10.00626
MA0047.20.67
MA0048.10.848
MA0050.13.15319e-7
MA0051.10.00776
MA0052.10.286
MA0055.10.644
MA0057.10.352
MA0058.10.827
MA0059.10.814
MA0060.14.56945e-8
MA0061.11.54218e-18
MA0062.20.00154
MA0065.20.231
MA0066.10.092
MA0067.15.59294e-5
MA0068.10.0684
MA0069.10.806
MA0070.10.00841
MA0071.10.296
MA0072.10.586
MA0073.10.218
MA0074.10.207
MA0076.10.661
MA0077.10.136
MA0078.10.815
MA0079.20.542
MA0080.21.76231e-15
MA0081.11.56452e-4
MA0083.10.289
MA0084.10.491
MA0087.10.752
MA0088.10.558
MA0090.10.0144
MA0091.10.63
MA0092.10.927
MA0093.10.951
MA0099.24.04566e-20
MA0100.10.522
MA0101.11.12031e-16
MA0102.21.84424e-10
MA0103.10.28
MA0104.20.538
MA0105.13.24724e-18
MA0106.10.135
MA0107.12.20805e-19
MA0108.20.00272
MA0111.10.358
MA0112.20.01
MA0113.10.473
MA0114.10.925
MA0115.10.181
MA0116.17.56885e-4
MA0117.10.0178
MA0119.10.764
MA0122.10.782
MA0124.10.558
MA0125.10.0266
MA0131.10.894
MA0135.10.871
MA0136.12.77941e-19
MA0137.20.919
MA0138.20.0911
MA0139.10.762
MA0140.10.441
MA0141.10.376
MA0142.10.483
MA0143.10.487
MA0144.10.35
MA0145.10.959
MA0146.10.106
MA0147.10.633
MA0148.10.754
MA0149.10.624
MA0150.15.00889e-10
MA0152.10.0696
MA0153.10.00168
MA0154.10.00231
MA0155.10.987
MA0156.19.93405e-16
MA0157.10.0557
MA0159.10.0473
MA0160.10.121
MA0162.10.978
MA0163.17.29321e-7
MA0164.10.797
MA0258.10.0263
MA0259.10.854



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11958

Novel motifP-value
10.281
100.0134
1000.992
1010.635
1020.932
1030.721
1040.574
1050.108
1060.00229
1070.836
1080.668
1090.251
110.254
1100.557
1110.11
1120.567
1130.12
1140.133
1150.28
1160.784
1170.00966
1180.153
1190.677
120.295
1200.602
1210.669
1220.51
1234.80821e-4
1240.929
1250.427
1260.328
1270.793
1280.0893
1290.823
130.272
1300.228
1310.694
1320.0918
1330.769
1340.839
1350.533
1360.999
1370.00179
1380.178
1390.0229
140.32
1400.499
1410.368
1420.758
1430.0105
1440.59
1450.655
1460.607
1470.196
1480.0648
1490.818
150.116
1500.768
1510.15
1520.382
1530.887
1540.357
1550.314
1560.829
1570.808
1580.0673
1590.0421
160.823
1600.965
1610.58
1620.0933
1630.624
1640.0555
1650.273
1660.777
1670.276
1680.155
1690.109
170.452
180.331
190.995
20.612
200.378
210.768
220.617
230.119
240.814
250.192
260.185
270.972
280.388
290.0907
30.233
300.191
310.969
320.102
330.253
340.815
350.107
360.124
370.127
380.585
390.988
40.832
400.37
410.0135
420.432
430.0459
440.605
450.888
460.306
470.647
480.577
490.0823
50.216
500.792
510.505
520.567
530.138
540.553
550.911
560.803
570.951
580.107
590.466
60.927
600.095
610.254
620.0695
630.78
640.397
650.363
660.0396
670.714
680.386
690.592
70.284
700.0681
710.0485
720.301
730.234
740.183
750.0754
760.0815
770.611
780.264
790.695
80.946
800.0364
810.374
820.129
830.419
840.0907
850.0698
860.0236
870.443
880.785
890.679
90.457
900.134
910.227
920.316
930.866
940.0846
950.189
960.476
970.987
980.136
990.00342



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11958


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000226 (single nucleate cell)
0000080 (circulating cell)
0000842 (mononuclear cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000178 (blood)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000179 (haemolymphatic fluid)
0000463 (organism substance)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0002390 (hematopoietic system)
0004535 (cardiovascular system)
0002193 (hemolymphoid system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000135 (human peripheral blood mononuclear cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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