FF:11402-118D7: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00005963 | |||
|DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00005963!sRNA-Seq@SAMD00005963 | |||
|accession_numbers=CAGE;DRX008364;DRR009236;DRZ000661;DRZ002046;DRZ012011;DRZ013396 | |||
|accession_numbers_RNASeq=RNA-Seq;DRX057109;DRR062868;DRZ007944!sRNA-Seq;DRX037100;DRR041466;DRZ007108 | |||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000076,CL:0000213,CL:0000215,CL:0000255,CL:0000077 | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000099 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mesothelial%2520Cells%252c%2520donor3.CNhs12012.11402-118D7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mesothelial%2520Cells%252c%2520donor3.CNhs12012.11402-118D7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mesothelial%2520Cells%252c%2520donor3.CNhs12012.11402-118D7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mesothelial%2520Cells%252c%2520donor3.CNhs12012.11402-118D7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mesothelial%2520Cells%252c%2520donor3.CNhs12012.11402-118D7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11402-118D7 | |id=FF:11402-118D7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000099 | ||
|is_obsolete= | |||
|library_id=CNhs12012 | |||
|library_id_phase_based=2:CNhs12012 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11402 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10007.ATGTCA.11402 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11402 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10007.ATGTCA.11402 | |||
|name=Mesothelial Cells, donor3 | |name=Mesothelial Cells, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12012,LSID837,release011,COMPLETED | |profile_hcage=CNhs12012,LSID837,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10007,,, | |profile_srnaseq=SRhi10007,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=118 | |rna_box=118 | ||
|rna_catalog_number=N/A | |rna_catalog_number=N/A | ||
| Line 56: | Line 82: | ||
|rna_tube_id=118D7 | |rna_tube_id=118D7 | ||
|rna_weight_ug=29.6 | |rna_weight_ug=29.6 | ||
|rnaseq_library_id=RDhi10051!SRhi10007.ATGTCA | |||
|sample_age=24 | |sample_age=24 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=F-MES-F | |sample_cell_catalog=F-MES-F | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.40348908220799e-204!GO:0005737;cytoplasm;2.18197018649275e-204!GO:0043226;organelle;1.72642603336238e-152!GO:0043229;intracellular organelle;4.33209046667903e-152!GO:0043231;intracellular membrane-bound organelle;3.89972470152586e-146!GO:0043227;membrane-bound organelle;5.66954825897584e-146!GO:0044444;cytoplasmic part;3.58797413024654e-143!GO:0044422;organelle part;4.89481498684354e-116!GO:0044446;intracellular organelle part;1.154813730085e-114!GO:0005515;protein binding;1.4397946087514e-82!GO:0032991;macromolecular complex;1.99671931130901e-74!GO:0044238;primary metabolic process;3.24883399042007e-65!GO:0030529;ribonucleoprotein complex;2.27492733989696e-63!GO:0044237;cellular metabolic process;6.18517801096417e-63!GO:0043170;macromolecule metabolic process;4.46134999889184e-59!GO:0031090;organelle membrane;2.92368867012764e-57!GO:0043233;organelle lumen;8.9034073876829e-56!GO:0031974;membrane-enclosed lumen;8.9034073876829e-56!GO:0005739;mitochondrion;1.09932481124193e-55!GO:0019538;protein metabolic process;1.68293383192323e-53!GO:0044428;nuclear part;7.85762360505991e-51!GO:0003723;RNA binding;4.28765066825992e-50!GO:0033036;macromolecule localization;7.51831422632041e-48!GO:0015031;protein transport;2.79263868013256e-47!GO:0016043;cellular component organization and biogenesis;2.81379236703944e-46!GO:0044260;cellular macromolecule metabolic process;3.51607865530156e-46!GO:0044267;cellular protein metabolic process;1.67898250165453e-45!GO:0045184;establishment of protein localization;7.2803223017149e-45!GO:0008104;protein localization;8.12504497516885e-45!GO:0005840;ribosome;1.34470107578124e-39!GO:0005634;nucleus;4.01712843561854e-39!GO:0044429;mitochondrial part;1.80610480594113e-38!GO:0006412;translation;5.6653888646467e-38!GO:0043234;protein complex;6.86448673423145e-38!GO:0046907;intracellular transport;7.94401274266845e-38!GO:0005829;cytosol;1.38301633376909e-36!GO:0031967;organelle envelope;9.49624254415173e-36!GO:0031975;envelope;1.61442750869662e-35!GO:0009058;biosynthetic process;2.34345374931324e-34!GO:0003735;structural constituent of ribosome;3.55161238387483e-34!GO:0009059;macromolecule biosynthetic process;7.6252362783147e-33!GO:0031981;nuclear lumen;1.57092621263894e-31!GO:0006886;intracellular protein transport;6.93307390528192e-31!GO:0006396;RNA processing;6.98126085096993e-31!GO:0033279;ribosomal subunit;1.33096490715823e-29!GO:0044249;cellular biosynthetic process;4.05969402835378e-28!GO:0043283;biopolymer metabolic process;4.68599710103687e-28!GO:0016071;mRNA metabolic process;5.19459636139351e-28!GO:0012505;endomembrane system;1.40955562323833e-26!GO:0005740;mitochondrial envelope;1.93536906829587e-26!GO:0065003;macromolecular complex assembly;9.25733780195022e-26!GO:0051649;establishment of cellular localization;1.10807281405586e-25!GO:0008380;RNA splicing;1.94850490091442e-25!GO:0051641;cellular localization;2.58414010721222e-25!GO:0031966;mitochondrial membrane;2.86083856714613e-25!GO:0005783;endoplasmic reticulum;1.9229146652934e-24!GO:0022607;cellular component assembly;9.16739550570464e-24!GO:0019866;organelle inner membrane;1.01195750896769e-23!GO:0005794;Golgi apparatus;1.08852887762626e-23!GO:0006996;organelle organization and biogenesis;1.87739744194776e-23!GO:0006397;mRNA processing;7.33645624270747e-23!GO:0005743;mitochondrial inner membrane;1.0894966258144e-22!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.34183079943057e-22!GO:0043228;non-membrane-bound organelle;8.20624902218051e-22!GO:0043232;intracellular non-membrane-bound organelle;8.20624902218051e-22!GO:0006119;oxidative phosphorylation;1.18655106479631e-21!GO:0010467;gene expression;1.31621814583447e-21!GO:0005654;nucleoplasm;1.24870553814377e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.30086028271628e-19!GO:0016462;pyrophosphatase activity;1.37126316592287e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.66538115768397e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;2.64609888014227e-19!GO:0044445;cytosolic part;5.10211262460715e-19!GO:0006457;protein folding;9.3856231909554e-19!GO:0044455;mitochondrial membrane part;1.17127730882669e-18!GO:0000166;nucleotide binding;1.32444262515002e-18!GO:0017111;nucleoside-triphosphatase activity;3.14476595510257e-18!GO:0016192;vesicle-mediated transport;4.31086885021266e-18!GO:0044432;endoplasmic reticulum part;4.31086885021266e-18!GO:0048770;pigment granule;4.51289548273345e-18!GO:0042470;melanosome;4.51289548273345e-18!GO:0005681;spliceosome;1.17660175240602e-17!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.06771006629545e-16!GO:0044451;nucleoplasm part;1.38590152828584e-16!GO:0043412;biopolymer modification;3.17133951958718e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;3.30869901187899e-16!GO:0043285;biopolymer catabolic process;3.89220736407594e-16!GO:0015934;large ribosomal subunit;4.51812513022914e-16!GO:0019941;modification-dependent protein catabolic process;6.5006514394577e-16!GO:0043632;modification-dependent macromolecule catabolic process;6.5006514394577e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.00388532623208e-15!GO:0044257;cellular protein catabolic process;1.12143497401835e-15!GO:0006512;ubiquitin cycle;1.22276244873367e-15!GO:0006464;protein modification process;1.31861480438859e-15!GO:0030163;protein catabolic process;1.5962410025263e-15!GO:0048193;Golgi vesicle transport;1.5962410025263e-15!GO:0008134;transcription factor binding;1.71640426152486e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.00221555254084e-15!GO:0000502;proteasome complex (sensu Eukaryota);2.658867706945e-15!GO:0044265;cellular macromolecule catabolic process;2.84170307965731e-15!GO:0005746;mitochondrial respiratory chain;4.70224506175123e-15!GO:0016874;ligase activity;9.29467115039633e-15!GO:0015935;small ribosomal subunit;1.57083302870621e-14!GO:0009057;macromolecule catabolic process;1.57999527453989e-14!GO:0031980;mitochondrial lumen;1.87711967096847e-14!GO:0005759;mitochondrial matrix;1.87711967096847e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.79721349086511e-14!GO:0003954;NADH dehydrogenase activity;2.79721349086511e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.79721349086511e-14!GO:0006605;protein targeting;2.79721349086511e-14!GO:0022618;protein-RNA complex assembly;4.2101538231724e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.13616483165173e-14!GO:0012501;programmed cell death;7.49431204180488e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.45734061472241e-13!GO:0051082;unfolded protein binding;2.08409013060419e-13!GO:0051186;cofactor metabolic process;2.09634296204898e-13!GO:0032553;ribonucleotide binding;2.24940243035726e-13!GO:0032555;purine ribonucleotide binding;2.24940243035726e-13!GO:0017076;purine nucleotide binding;2.67269326792193e-13!GO:0006915;apoptosis;2.94084852151669e-13!GO:0007049;cell cycle;3.34274252617423e-13!GO:0005789;endoplasmic reticulum membrane;4.34681223193151e-13!GO:0008219;cell death;7.64363241951602e-13!GO:0016265;death;7.64363241951602e-13!GO:0005730;nucleolus;8.78918171531952e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.43338813234294e-12!GO:0045271;respiratory chain complex I;1.43338813234294e-12!GO:0005747;mitochondrial respiratory chain complex I;1.43338813234294e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.50353403736529e-12!GO:0042773;ATP synthesis coupled electron transport;1.50353403736529e-12!GO:0044248;cellular catabolic process;1.9556680079662e-12!GO:0008135;translation factor activity, nucleic acid binding;4.13301260106164e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.18731404524039e-12!GO:0043687;post-translational protein modification;7.15586300940497e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.1658503205656e-11!GO:0005768;endosome;1.20669560302386e-11!GO:0048523;negative regulation of cellular process;1.81398216334819e-11!GO:0009055;electron carrier activity;3.55255417708824e-11!GO:0044431;Golgi apparatus part;3.69993566324448e-11!GO:0003924;GTPase activity;3.86058620648555e-11!GO:0005761;mitochondrial ribosome;3.98500378067738e-11!GO:0000313;organellar ribosome;3.98500378067738e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.50346917903801e-11!GO:0006259;DNA metabolic process;8.71404792862992e-11!GO:0008639;small protein conjugating enzyme activity;1.40743857469867e-10!GO:0006461;protein complex assembly;1.69015330300775e-10!GO:0006732;coenzyme metabolic process;2.10837215259939e-10!GO:0031988;membrane-bound vesicle;2.22015844739681e-10!GO:0016023;cytoplasmic membrane-bound vesicle;2.29509505717205e-10!GO:0008565;protein transporter activity;2.40173982532654e-10!GO:0004842;ubiquitin-protein ligase activity;2.8935320948495e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.96852586923332e-10!GO:0048475;coated membrane;5.38260935442764e-10!GO:0030117;membrane coat;5.38260935442764e-10!GO:0005635;nuclear envelope;5.7213750614558e-10!GO:0005793;ER-Golgi intermediate compartment;9.19744449831137e-10!GO:0019787;small conjugating protein ligase activity;9.21489796019905e-10!GO:0030120;vesicle coat;1.31737587186963e-09!GO:0030662;coated vesicle membrane;1.31737587186963e-09!GO:0022402;cell cycle process;1.41529962788483e-09!GO:0048519;negative regulation of biological process;1.44620486258198e-09!GO:0003712;transcription cofactor activity;2.33235861334618e-09!GO:0031982;vesicle;2.6478685982531e-09!GO:0009259;ribonucleotide metabolic process;2.81254427132497e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;3.00237021587191e-09!GO:0000375;RNA splicing, via transesterification reactions;3.00237021587191e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.00237021587191e-09!GO:0003743;translation initiation factor activity;3.13711043456059e-09!GO:0031410;cytoplasmic vesicle;3.29255831692299e-09!GO:0006413;translational initiation;3.58593220074214e-09!GO:0009150;purine ribonucleotide metabolic process;4.27456338862191e-09!GO:0016881;acid-amino acid ligase activity;4.38455998913943e-09!GO:0000139;Golgi membrane;4.56104711063019e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.66594612142162e-09!GO:0006913;nucleocytoplasmic transport;5.08378271766895e-09!GO:0000074;regulation of progression through cell cycle;5.32325999211073e-09!GO:0051726;regulation of cell cycle;5.62381672074823e-09!GO:0006163;purine nucleotide metabolic process;6.12081778938124e-09!GO:0031965;nuclear membrane;6.33296349536521e-09!GO:0043067;regulation of programmed cell death;6.98492666938705e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.66835842016804e-09!GO:0005524;ATP binding;9.17094038105455e-09!GO:0016604;nuclear body;9.66757872031124e-09!GO:0051169;nuclear transport;1.03689964864007e-08!GO:0032559;adenyl ribonucleotide binding;1.04576625278146e-08!GO:0042981;regulation of apoptosis;1.15038522325281e-08!GO:0006446;regulation of translational initiation;1.25060082062436e-08!GO:0030554;adenyl nucleotide binding;1.41837044752044e-08!GO:0043069;negative regulation of programmed cell death;1.73380415919232e-08!GO:0015986;ATP synthesis coupled proton transport;1.86080261886369e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.86080261886369e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.0531172863044e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.41167743476474e-08!GO:0006164;purine nucleotide biosynthetic process;3.64935978363155e-08!GO:0009199;ribonucleoside triphosphate metabolic process;4.86163299773723e-08!GO:0043066;negative regulation of apoptosis;5.00066168499213e-08!GO:0009260;ribonucleotide biosynthetic process;5.2244238791316e-08!GO:0019829;cation-transporting ATPase activity;5.48223672388009e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.84722276536437e-08!GO:0009144;purine nucleoside triphosphate metabolic process;5.84722276536437e-08!GO:0044453;nuclear membrane part;7.21466506142552e-08!GO:0009056;catabolic process;7.23537626728964e-08!GO:0009141;nucleoside triphosphate metabolic process;7.23845838768751e-08!GO:0044440;endosomal part;7.7302984785791e-08!GO:0010008;endosome membrane;7.7302984785791e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.7302984785791e-08!GO:0005525;GTP binding;7.7302984785791e-08!GO:0006916;anti-apoptosis;8.33360635819584e-08!GO:0009060;aerobic respiration;9.47138389897298e-08!GO:0017038;protein import;9.77674673423735e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.10374679758466e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.10374679758466e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.33111426983378e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.33111426983378e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.54256332251187e-07!GO:0005773;vacuole;1.7092022995953e-07!GO:0006793;phosphorus metabolic process;2.11640104531036e-07!GO:0006796;phosphate metabolic process;2.11640104531036e-07!GO:0046034;ATP metabolic process;2.13605249345179e-07!GO:0005905;coated pit;2.17863756023314e-07!GO:0042623;ATPase activity, coupled;2.43751567621029e-07!GO:0031252;leading edge;2.45545716932621e-07!GO:0007005;mitochondrion organization and biogenesis;2.52335478752373e-07!GO:0016887;ATPase activity;2.85231370048695e-07!GO:0051246;regulation of protein metabolic process;3.10568733163016e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;3.40520914853192e-07!GO:0045786;negative regulation of progression through cell cycle;3.40520914853192e-07!GO:0006754;ATP biosynthetic process;3.79834385632393e-07!GO:0006753;nucleoside phosphate metabolic process;3.79834385632393e-07!GO:0016491;oxidoreductase activity;4.2532987921504e-07!GO:0045333;cellular respiration;4.39157615809755e-07!GO:0005770;late endosome;4.45648945057652e-07!GO:0016607;nuclear speck;5.35265519872147e-07!GO:0005798;Golgi-associated vesicle;6.298791760569e-07!GO:0032561;guanyl ribonucleotide binding;7.40312037388045e-07!GO:0019001;guanyl nucleotide binding;7.40312037388045e-07!GO:0016740;transferase activity;7.45218136020591e-07!GO:0050794;regulation of cellular process;7.75645181748166e-07!GO:0003676;nucleic acid binding;8.20655468381041e-07!GO:0003714;transcription corepressor activity;8.74798980752843e-07!GO:0051188;cofactor biosynthetic process;9.56721600513878e-07!GO:0005788;endoplasmic reticulum lumen;1.04568590437028e-06!GO:0016070;RNA metabolic process;1.10982549951878e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.29293154454099e-06!GO:0042254;ribosome biogenesis and assembly;1.32371841678693e-06!GO:0006099;tricarboxylic acid cycle;1.34254304866099e-06!GO:0046356;acetyl-CoA catabolic process;1.34254304866099e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.37836509316073e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.70778758665938e-06!GO:0006366;transcription from RNA polymerase II promoter;2.74767099714349e-06!GO:0016310;phosphorylation;2.84949000409682e-06!GO:0065002;intracellular protein transport across a membrane;2.98387709806174e-06!GO:0005643;nuclear pore;3.38915243776844e-06!GO:0005839;proteasome core complex (sensu Eukaryota);3.4498699751143e-06!GO:0000278;mitotic cell cycle;3.59172890945425e-06!GO:0030036;actin cytoskeleton organization and biogenesis;3.82181639566763e-06!GO:0000323;lytic vacuole;4.04359758682228e-06!GO:0005764;lysosome;4.04359758682228e-06!GO:0016564;transcription repressor activity;4.31742326642328e-06!GO:0016787;hydrolase activity;5.09725294660852e-06!GO:0006084;acetyl-CoA metabolic process;5.21273026554349e-06!GO:0016044;membrane organization and biogenesis;6.42283005055191e-06!GO:0006974;response to DNA damage stimulus;6.61526375785745e-06!GO:0051789;response to protein stimulus;6.7026887787573e-06!GO:0006986;response to unfolded protein;6.7026887787573e-06!GO:0045259;proton-transporting ATP synthase complex;7.59455138466449e-06!GO:0008092;cytoskeletal protein binding;7.90871620644333e-06!GO:0030532;small nuclear ribonucleoprotein complex;9.35843487993701e-06!GO:0051187;cofactor catabolic process;9.49010241138986e-06!GO:0008026;ATP-dependent helicase activity;1.15448795552759e-05!GO:0005769;early endosome;1.31463458611621e-05!GO:0009117;nucleotide metabolic process;1.35744232872094e-05!GO:0007264;small GTPase mediated signal transduction;1.40252003524875e-05!GO:0004386;helicase activity;1.41378739055479e-05!GO:0032446;protein modification by small protein conjugation;1.65009839121694e-05!GO:0016567;protein ubiquitination;1.69250698067288e-05!GO:0043623;cellular protein complex assembly;1.79124915801576e-05!GO:0006399;tRNA metabolic process;1.97088062176764e-05!GO:0030029;actin filament-based process;1.98600590109317e-05!GO:0000151;ubiquitin ligase complex;1.98600590109317e-05!GO:0005667;transcription factor complex;2.00614248911765e-05!GO:0006613;cotranslational protein targeting to membrane;2.00790452379649e-05!GO:0051170;nuclear import;2.0829179911459e-05!GO:0004298;threonine endopeptidase activity;2.21350623593971e-05!GO:0008654;phospholipid biosynthetic process;2.24728798035335e-05!GO:0009109;coenzyme catabolic process;2.41663492115905e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;2.72784920314082e-05!GO:0030118;clathrin coat;2.91824125596461e-05!GO:0006091;generation of precursor metabolites and energy;2.98807086580405e-05!GO:0046930;pore complex;3.07337654921235e-05!GO:0009108;coenzyme biosynthetic process;3.13890662979132e-05!GO:0007243;protein kinase cascade;3.16995188237732e-05!GO:0006403;RNA localization;3.22289243567324e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.45142627808889e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.51037114630458e-05!GO:0004812;aminoacyl-tRNA ligase activity;3.51037114630458e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.51037114630458e-05!GO:0030659;cytoplasmic vesicle membrane;3.58856855047919e-05!GO:0006606;protein import into nucleus;3.59741023569433e-05!GO:0030867;rough endoplasmic reticulum membrane;3.59741023569433e-05!GO:0050789;regulation of biological process;4.41983729425917e-05!GO:0050657;nucleic acid transport;4.41983729425917e-05!GO:0051236;establishment of RNA localization;4.41983729425917e-05!GO:0050658;RNA transport;4.41983729425917e-05!GO:0007010;cytoskeleton organization and biogenesis;5.00466031859091e-05!GO:0045454;cell redox homeostasis;5.08293582871566e-05!GO:0043038;amino acid activation;5.32511935344081e-05!GO:0006418;tRNA aminoacylation for protein translation;5.32511935344081e-05!GO:0043039;tRNA aminoacylation;5.32511935344081e-05!GO:0030133;transport vesicle;5.72264037162389e-05!GO:0031968;organelle outer membrane;6.19208696083465e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.25572315047712e-05!GO:0019867;outer membrane;7.01306619222366e-05!GO:0006323;DNA packaging;7.48324345391811e-05!GO:0000245;spliceosome assembly;9.0214996282359e-05!GO:0051276;chromosome organization and biogenesis;9.16323663123833e-05!GO:0048471;perinuclear region of cytoplasm;9.31649498452993e-05!GO:0006752;group transfer coenzyme metabolic process;0.000103266017971067!GO:0044433;cytoplasmic vesicle part;0.000109680444911875!GO:0051427;hormone receptor binding;0.000109680444911875!GO:0005791;rough endoplasmic reticulum;0.000114082406994832!GO:0016568;chromatin modification;0.000119476277917407!GO:0006612;protein targeting to membrane;0.000130182074315081!GO:0005762;mitochondrial large ribosomal subunit;0.000147511367946273!GO:0000315;organellar large ribosomal subunit;0.000147511367946273!GO:0016126;sterol biosynthetic process;0.000152406992899333!GO:0048522;positive regulation of cellular process;0.000155416105530188!GO:0031324;negative regulation of cellular metabolic process;0.000157739371085314!GO:0016853;isomerase activity;0.00015905674027177!GO:0030119;AP-type membrane coat adaptor complex;0.000171824683853037!GO:0030658;transport vesicle membrane;0.000180556517911733!GO:0008361;regulation of cell size;0.000185173034140077!GO:0001726;ruffle;0.000193478001665626!GO:0015980;energy derivation by oxidation of organic compounds;0.000196592425409971!GO:0006281;DNA repair;0.000214122626126011!GO:0035257;nuclear hormone receptor binding;0.00021482435029934!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000215499203351635!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000218819226841135!GO:0015630;microtubule cytoskeleton;0.000236148689673127!GO:0005885;Arp2/3 protein complex;0.000252246915905236!GO:0012506;vesicle membrane;0.000257101197512652!GO:0016049;cell growth;0.000257101197512652!GO:0005741;mitochondrial outer membrane;0.000264970616371459!GO:0003724;RNA helicase activity;0.000265877203004167!GO:0030131;clathrin adaptor complex;0.000296701111267547!GO:0005048;signal sequence binding;0.000322309175450685!GO:0033116;ER-Golgi intermediate compartment membrane;0.00036671633872519!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000380644452601948!GO:0006364;rRNA processing;0.000420186020144848!GO:0004576;oligosaccharyl transferase activity;0.000427004446748188!GO:0008250;oligosaccharyl transferase complex;0.000441424678126903!GO:0016563;transcription activator activity;0.000448074045198132!GO:0009892;negative regulation of metabolic process;0.000489465172415045!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000506592878475194!GO:0006839;mitochondrial transport;0.000506592878475194!GO:0051028;mRNA transport;0.000522087500969037!GO:0003713;transcription coactivator activity;0.000525243882153431!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000560169637553529!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000582569634414933!GO:0030660;Golgi-associated vesicle membrane;0.0005837192179791!GO:0003697;single-stranded DNA binding;0.000592446144609934!GO:0006897;endocytosis;0.000620244087567328!GO:0010324;membrane invagination;0.000620244087567328!GO:0048468;cell development;0.00062380731482196!GO:0016072;rRNA metabolic process;0.000639439331018878!GO:0030663;COPI coated vesicle membrane;0.000665236293259946!GO:0030126;COPI vesicle coat;0.000665236293259946!GO:0043021;ribonucleoprotein binding;0.000681290739417294!GO:0022403;cell cycle phase;0.000724063178715372!GO:0016197;endosome transport;0.000781213271055205!GO:0018196;peptidyl-asparagine modification;0.000783306259564999!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000783306259564999!GO:0065004;protein-DNA complex assembly;0.000831291973545348!GO:0001558;regulation of cell growth;0.000916270652274575!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00106347951386376!GO:0030027;lamellipodium;0.00106347951386376!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00106957949162511!GO:0016779;nucleotidyltransferase activity;0.00109045730105266!GO:0045045;secretory pathway;0.0011091967550099!GO:0006333;chromatin assembly or disassembly;0.00112209272578511!GO:0051920;peroxiredoxin activity;0.00114171399740196!GO:0030125;clathrin vesicle coat;0.00115151321316931!GO:0030665;clathrin coated vesicle membrane;0.00115151321316931!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00115154877039005!GO:0043566;structure-specific DNA binding;0.00119629243337735!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00125271639093187!GO:0030137;COPI-coated vesicle;0.00128009729330097!GO:0006695;cholesterol biosynthetic process;0.00129899197345185!GO:0030132;clathrin coat of coated pit;0.00132235586718637!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00133391563391016!GO:0030176;integral to endoplasmic reticulum membrane;0.00135310661592851!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0013836300891813!GO:0051301;cell division;0.00139432580789086!GO:0046474;glycerophospholipid biosynthetic process;0.00140012606888454!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00152365845112387!GO:0031072;heat shock protein binding;0.00159762379994424!GO:0016859;cis-trans isomerase activity;0.00164259980975974!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00168412610547739!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00168412610547739!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00168412610547739!GO:0044262;cellular carbohydrate metabolic process;0.00183773021961966!GO:0051168;nuclear export;0.0018927668300332!GO:0008610;lipid biosynthetic process;0.00190817392636063!GO:0000087;M phase of mitotic cell cycle;0.00196058381039414!GO:0005694;chromosome;0.00199068869252763!GO:0019899;enzyme binding;0.00199491462387721!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00199491462387721!GO:0007050;cell cycle arrest;0.00201235098658614!GO:0031901;early endosome membrane;0.00205790181730931!GO:0006260;DNA replication;0.00209814219084042!GO:0003729;mRNA binding;0.00211804451719998!GO:0007067;mitosis;0.00215083102553385!GO:0046519;sphingoid metabolic process;0.00229787736271609!GO:0043681;protein import into mitochondrion;0.00229937903225653!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00229937903225653!GO:0015399;primary active transmembrane transporter activity;0.00229937903225653!GO:0006672;ceramide metabolic process;0.00245375763392965!GO:0009719;response to endogenous stimulus;0.00246689630372916!GO:0015992;proton transport;0.00253321738599702!GO:0006891;intra-Golgi vesicle-mediated transport;0.00256254231272522!GO:0006818;hydrogen transport;0.00256567823532117!GO:0006650;glycerophospholipid metabolic process;0.00268701117805556!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00278842620282377!GO:0051325;interphase;0.00281564623138813!GO:0065009;regulation of a molecular function;0.00281564623138813!GO:0006626;protein targeting to mitochondrion;0.00281564623138813!GO:0051329;interphase of mitotic cell cycle;0.00293787492224512!GO:0046467;membrane lipid biosynthetic process;0.00296098970944798!GO:0008186;RNA-dependent ATPase activity;0.00297239207449006!GO:0048487;beta-tubulin binding;0.00300418509667569!GO:0030134;ER to Golgi transport vesicle;0.00302847281900764!GO:0031902;late endosome membrane;0.00308649031158992!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00316767516327683!GO:0016481;negative regulation of transcription;0.00322356417399961!GO:0000314;organellar small ribosomal subunit;0.00323363039786707!GO:0005763;mitochondrial small ribosomal subunit;0.00323363039786707!GO:0046489;phosphoinositide biosynthetic process;0.00327055918560371!GO:0006414;translational elongation;0.00327137834857721!GO:0004674;protein serine/threonine kinase activity;0.00335764270535078!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0034203993988161!GO:0006509;membrane protein ectodomain proteolysis;0.00343222667288545!GO:0033619;membrane protein proteolysis;0.00343222667288545!GO:0046870;cadmium ion binding;0.00353564292688128!GO:0033673;negative regulation of kinase activity;0.00386350937096806!GO:0006469;negative regulation of protein kinase activity;0.00386350937096806!GO:0005813;centrosome;0.00390275316817534!GO:0035258;steroid hormone receptor binding;0.00404331565486726!GO:0003779;actin binding;0.0041857836414537!GO:0048500;signal recognition particle;0.00422363206059162!GO:0017166;vinculin binding;0.00452760967249232!GO:0048518;positive regulation of biological process;0.00468544521869742!GO:0030127;COPII vesicle coat;0.00478327243013376!GO:0012507;ER to Golgi transport vesicle membrane;0.00478327243013376!GO:0032940;secretion by cell;0.00487920186117599!GO:0008632;apoptotic program;0.00493378409726244!GO:0030384;phosphoinositide metabolic process;0.00503222054732301!GO:0044427;chromosomal part;0.00515730571955851!GO:0015631;tubulin binding;0.00524156986373104!GO:0003899;DNA-directed RNA polymerase activity;0.00541982791377842!GO:0019843;rRNA binding;0.00571280197317536!GO:0016860;intramolecular oxidoreductase activity;0.00571556112689423!GO:0031418;L-ascorbic acid binding;0.00579942674088246!GO:0008047;enzyme activator activity;0.00582291452083766!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00606467988989025!GO:0051128;regulation of cellular component organization and biogenesis;0.00606467988989025!GO:0008139;nuclear localization sequence binding;0.00626048283286047!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00690847821810499!GO:0006892;post-Golgi vesicle-mediated transport;0.00690855273935586!GO:0051252;regulation of RNA metabolic process;0.00696885543478689!GO:0006402;mRNA catabolic process;0.00706983389883755!GO:0051348;negative regulation of transferase activity;0.00715193644081084!GO:0009967;positive regulation of signal transduction;0.0074061368993763!GO:0004004;ATP-dependent RNA helicase activity;0.00741691685324425!GO:0000785;chromatin;0.00765980910926875!GO:0005774;vacuolar membrane;0.00767911284021479!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00771388150550487!GO:0045047;protein targeting to ER;0.00771388150550487!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00785896590169825!GO:0009165;nucleotide biosynthetic process;0.00785934999367089!GO:0007040;lysosome organization and biogenesis;0.00790589130672549!GO:0043284;biopolymer biosynthetic process;0.00797546984968693!GO:0043488;regulation of mRNA stability;0.00824513750187253!GO:0043487;regulation of RNA stability;0.00824513750187253!GO:0005938;cell cortex;0.0083326942030588!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00840515072294204!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00840515072294204!GO:0005815;microtubule organizing center;0.0085111057225184!GO:0007242;intracellular signaling cascade;0.00893248226892988!GO:0007006;mitochondrial membrane organization and biogenesis;0.00895349332916138!GO:0030521;androgen receptor signaling pathway;0.00929066002906782!GO:0005869;dynactin complex;0.00938397789727963!GO:0000059;protein import into nucleus, docking;0.00987948879009616!GO:0008180;signalosome;0.00989972964703188!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.010295486463934!GO:0006739;NADP metabolic process;0.0102993149155177!GO:0003746;translation elongation factor activity;0.0103101646699765!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0106058098112736!GO:0042802;identical protein binding;0.0106243893180795!GO:0006595;polyamine metabolic process;0.010736226994644!GO:0051059;NF-kappaB binding;0.0107555832749073!GO:0007033;vacuole organization and biogenesis;0.0110495956064776!GO:0006769;nicotinamide metabolic process;0.0116375753167807!GO:0016408;C-acyltransferase activity;0.0118778728028437!GO:0043492;ATPase activity, coupled to movement of substances;0.0119454309505379!GO:0051287;NAD binding;0.0119454309505379!GO:0030518;steroid hormone receptor signaling pathway;0.0125745201699181!GO:0008243;plasminogen activator activity;0.0127450125898981!GO:0008312;7S RNA binding;0.0128433362709943!GO:0030100;regulation of endocytosis;0.0129956611555204!GO:0022406;membrane docking;0.0129956611555204!GO:0048278;vesicle docking;0.0129956611555204!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0130038005166439!GO:0043433;negative regulation of transcription factor activity;0.0130038005166439!GO:0065007;biological regulation;0.0130762036641806!GO:0007030;Golgi organization and biogenesis;0.0131079938248534!GO:0016301;kinase activity;0.013453918744414!GO:0022890;inorganic cation transmembrane transporter activity;0.0136962573989764!GO:0045792;negative regulation of cell size;0.0141897559927788!GO:0005862;muscle thin filament tropomyosin;0.0142262675823363!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0143034393506744!GO:0006383;transcription from RNA polymerase III promoter;0.0143602796518365!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0143823085843459!GO:0051101;regulation of DNA binding;0.0146401870850727!GO:0031301;integral to organelle membrane;0.0146792247894481!GO:0008234;cysteine-type peptidase activity;0.0147234528588215!GO:0030031;cell projection biogenesis;0.015049355373548!GO:0003711;transcription elongation regulator activity;0.015442797667578!GO:0030308;negative regulation of cell growth;0.0157005458490966!GO:0006904;vesicle docking during exocytosis;0.015731348508936!GO:0016363;nuclear matrix;0.0158808616044207!GO:0043407;negative regulation of MAP kinase activity;0.016293292530974!GO:0031543;peptidyl-proline dioxygenase activity;0.0164393015577018!GO:0008022;protein C-terminus binding;0.0164837147125183!GO:0031124;mRNA 3'-end processing;0.0166276583579675!GO:0007265;Ras protein signal transduction;0.0170413140584282!GO:0035035;histone acetyltransferase binding;0.0170883997679421!GO:0006497;protein amino acid lipidation;0.0171400304328157!GO:0050681;androgen receptor binding;0.0175476183875905!GO:0051087;chaperone binding;0.0177847738910458!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0180970379137407!GO:0033043;regulation of organelle organization and biogenesis;0.0180970379137407!GO:0007034;vacuolar transport;0.0181614892144596!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0184528441883004!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0189615451251933!GO:0043065;positive regulation of apoptosis;0.0190524827858439!GO:0030139;endocytic vesicle;0.019349294572314!GO:0051540;metal cluster binding;0.0193803457226434!GO:0051536;iron-sulfur cluster binding;0.0193803457226434!GO:0006778;porphyrin metabolic process;0.0193803457226434!GO:0033013;tetrapyrrole metabolic process;0.0193803457226434!GO:0031625;ubiquitin protein ligase binding;0.0195986014458291!GO:0005874;microtubule;0.0197616537667874!GO:0008154;actin polymerization and/or depolymerization;0.0198275023875888!GO:0006643;membrane lipid metabolic process;0.0198593074471512!GO:0043068;positive regulation of programmed cell death;0.0202824263904421!GO:0000209;protein polyubiquitination;0.0204380412307635!GO:0006665;sphingolipid metabolic process;0.0206027039932019!GO:0044437;vacuolar part;0.0206606343299581!GO:0006352;transcription initiation;0.0212382123739647!GO:0050662;coenzyme binding;0.0213938117320851!GO:0006740;NADPH regeneration;0.0215998912819405!GO:0006098;pentose-phosphate shunt;0.0215998912819405!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0229450211803487!GO:0015002;heme-copper terminal oxidase activity;0.0229450211803487!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0229450211803487!GO:0004129;cytochrome-c oxidase activity;0.0229450211803487!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.023165807125069!GO:0060166;olfactory pit development;0.023282566339708!GO:0021768;nucleus accumbens development;0.023282566339708!GO:0002072;optic cup morphogenesis involved in camera-type eye development;0.023282566339708!GO:0016272;prefoldin complex;0.0234118004747597!GO:0005832;chaperonin-containing T-complex;0.0234511039341039!GO:0008637;apoptotic mitochondrial changes;0.0239385733769297!GO:0032507;maintenance of cellular protein localization;0.0248481643048885!GO:0031529;ruffle organization and biogenesis;0.0253675139672733!GO:0006979;response to oxidative stress;0.0253816746491062!GO:0040008;regulation of growth;0.0254171801566215!GO:0042168;heme metabolic process;0.0256704962409648!GO:0005684;U2-dependent spliceosome;0.0261240516440485!GO:0003756;protein disulfide isomerase activity;0.0267203123563893!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0267203123563893!GO:0050811;GABA receptor binding;0.0270720169791672!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0278200869880696!GO:0030140;trans-Golgi network transport vesicle;0.027906525472576!GO:0042158;lipoprotein biosynthetic process;0.0279240036241616!GO:0031970;organelle envelope lumen;0.0280189725450732!GO:0030145;manganese ion binding;0.0285964619014022!GO:0003690;double-stranded DNA binding;0.0288078743706415!GO:0005765;lysosomal membrane;0.0288078743706415!GO:0043022;ribosome binding;0.0289532008804869!GO:0019798;procollagen-proline dioxygenase activity;0.0298870672385308!GO:0005096;GTPase activator activity;0.030581064353601!GO:0006733;oxidoreduction coenzyme metabolic process;0.030581064353601!GO:0030149;sphingolipid catabolic process;0.030787745035457!GO:0008538;proteasome activator activity;0.0313371991707903!GO:0004197;cysteine-type endopeptidase activity;0.0316709685872468!GO:0006417;regulation of translation;0.0319756633451254!GO:0030880;RNA polymerase complex;0.0325817522839793!GO:0008064;regulation of actin polymerization and/or depolymerization;0.032866213974626!GO:0046822;regulation of nucleocytoplasmic transport;0.0333293319674085!GO:0008484;sulfuric ester hydrolase activity;0.0336108811947774!GO:0006378;mRNA polyadenylation;0.0336691806286471!GO:0008601;protein phosphatase type 2A regulator activity;0.034130454504756!GO:0045334;clathrin-coated endocytic vesicle;0.0348387745102538!GO:0006458;'de novo' protein folding;0.0349336475699131!GO:0051084;'de novo' posttranslational protein folding;0.0349336475699131!GO:0006401;RNA catabolic process;0.0357226498325517!GO:0030865;cortical cytoskeleton organization and biogenesis;0.036502443061156!GO:0000339;RNA cap binding;0.0372297353179682!GO:0006506;GPI anchor biosynthetic process;0.0372297353179682!GO:0000279;M phase;0.0373436893235766!GO:0016125;sterol metabolic process;0.0374093520717543!GO:0051235;maintenance of localization;0.0374329905750385!GO:0004177;aminopeptidase activity;0.0382231346313043!GO:0045185;maintenance of protein localization;0.0384276900757857!GO:0009966;regulation of signal transduction;0.0392011296100901!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0395345025195726!GO:0012510;trans-Golgi network transport vesicle membrane;0.0395345025195726!GO:0006611;protein export from nucleus;0.039892619155591!GO:0030833;regulation of actin filament polymerization;0.0402579371439355!GO:0019362;pyridine nucleotide metabolic process;0.0407058777011518!GO:0030508;thiol-disulfide exchange intermediate activity;0.0414936047081469!GO:0004722;protein serine/threonine phosphatase activity;0.0417514298324555!GO:0051098;regulation of binding;0.0422390934299589!GO:0005784;translocon complex;0.0434692354680756!GO:0008287;protein serine/threonine phosphatase complex;0.0437667054588384!GO:0000082;G1/S transition of mitotic cell cycle;0.0442579197389735!GO:0022415;viral reproductive process;0.0452081611615612!GO:0016311;dephosphorylation;0.0454490636971669!GO:0016251;general RNA polymerase II transcription factor activity;0.0454490636971669!GO:0009100;glycoprotein metabolic process;0.0461191451386882!GO:0005083;small GTPase regulator activity;0.0462196068373978!GO:0000159;protein phosphatase type 2A complex;0.0462196068373978!GO:0030911;TPR domain binding;0.0462349329492992!GO:0043495;protein anchor;0.046287363198763!GO:0006334;nucleosome assembly;0.047252689721979!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0479240971945238!GO:0030522;intracellular receptor-mediated signaling pathway;0.0481016910932713!GO:0031371;ubiquitin conjugating enzyme complex;0.0483912371786076!GO:0031272;regulation of pseudopodium formation;0.0486631164890616!GO:0031269;pseudopodium formation;0.0486631164890616!GO:0031344;regulation of cell projection organization and biogenesis;0.0486631164890616!GO:0031268;pseudopodium organization and biogenesis;0.0486631164890616!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0486631164890616!GO:0031274;positive regulation of pseudopodium formation;0.0486631164890616!GO:0007021;tubulin folding;0.0494810267271819 | |||
|sample_id=11402 | |sample_id=11402 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=mesothelium | |sample_tissue=mesothelium | ||
|top_motifs=GZF1:2.79865758957;EVI1:1.99204523786;NKX3-1:1.9211987188;GCM1,2:1.87250521376;TEF:1.78967219445;HOX{A5,B5}:1.6685262455;ONECUT1,2:1.64627801212;ZBTB6:1.41786651104;ZNF384:1.31983282222;CRX:1.3053453338;HSF1,2:1.29357744407;TFCP2:1.24245172698;PAX5:1.22708843818;TEAD1:1.12303278495;AIRE:1.09267761454;ZIC1..3:1.08328445731;MYBL2:1.08003775384;TOPORS:1.04038383552;UFEwm:1.02035110184;POU1F1:0.978410691465;XCPE1{core}:0.92534978577;GLI1..3:0.894587827946;GATA4:0.858294109635;NKX2-1,4:0.856508425471;MTE{core}:0.851132831754;NKX3-2:0.839861344562;PAX4:0.820670703143;RXR{A,B,G}:0.813082047707;EGR1..3:0.807169724465;HIC1:0.783293296503;NFE2L1:0.778810783217;MAZ:0.768271523382;TFAP2B:0.761298084153;NR3C1:0.74854718882;ZBTB16:0.712988974602;PRDM1:0.675499516126;SP1:0.661048162459;HOXA9_MEIS1:0.653917303737;GTF2A1,2:0.644001859614;EP300:0.624582471293;LMO2:0.623884687821;TLX1..3_NFIC{dimer}:0.612558008372;MZF1:0.610560903805;KLF4:0.603768769912;SMAD1..7,9:0.592094823199;SRF:0.591043349696;MTF1:0.569443621539;GTF2I:0.565617117089;STAT5{A,B}:0.516908284571;HOX{A4,D4}:0.502913151769;TP53:0.491190970284;ZNF423:0.488336512482;ARID5B:0.48685081165;NFATC1..3:0.471597884444;EN1,2:0.468290561193;SPZ1:0.418679772162;PAX1,9:0.390921520089;NFE2L2:0.387506593985;NR6A1:0.343059426732;MYOD1:0.34269723333;CDX1,2,4:0.34264696973;IKZF1:0.310403016005;FOXM1:0.303353258591;GFI1B:0.297941277517;ZNF148:0.279250604223;ZFP161:0.269166655954;RREB1:0.263449263787;NR1H4:0.252755033493;bHLH_family:0.248024911532;CDC5L:0.24303049123;POU6F1:0.240437179281;TFAP2{A,C}:0.236694967222;PAX6:0.226340644235;NKX6-1,2:0.20632867564;TAL1_TCF{3,4,12}:0.201871121107;TBX4,5:0.18063395378;NHLH1,2:0.163388171078;HBP1_HMGB_SSRP1_UBTF:0.127487001066;REST:0.119654823953;FOS_FOS{B,L1}_JUN{B,D}:0.11673162174;JUN:0.104657812459;MED-1{core}:0.102958043265;ADNP_IRX_SIX_ZHX:0.0968280825088;SOX2:0.0686093366607;FOSL2:0.0598563061152;FOX{I1,J2}:0.0574918571808;BACH2:0.0476551161928;MYFfamily:0.0303020698643;HLF:0.0277031759186;TBP:0.0216801605793;IKZF2:0.0171286631292;PATZ1:0.0165166215613;STAT2,4,6:0.0087185095945;HNF1A:0.00610637278896;ZNF143:-0.00394772862611;AR:-0.00530668754938;FOXO1,3,4:-0.00813131342033;HMGA1,2:-0.0219581049971;SNAI1..3:-0.02925807234;IRF7:-0.045678981328;HNF4A_NR2F1,2:-0.055461721046;TFAP4:-0.0607828536718;HMX1:-0.0736867612654;NFIX:-0.0746997446151;SOX5:-0.0809857326487;NFIL3:-0.0849849171939;ELK1,4_GABP{A,B1}:-0.093130938152;FOXQ1:-0.0950770023258;ATF6:-0.0971112770523;IRF1,2:-0.104358719517;OCT4_SOX2{dimer}:-0.116882881429;ZNF238:-0.133902592904;EBF1:-0.136956252854;ALX1:-0.140019335845;NFE2:-0.144293510507;FOXL1:-0.151026120612;ZEB1:-0.159084488888;ATF2:-0.183778013636;GATA6:-0.194644300074;FOXP3:-0.198140497793;RXRA_VDR{dimer}:-0.203279446995;PPARG:-0.20886819408;DMAP1_NCOR{1,2}_SMARC:-0.214854921895;NFKB1_REL_RELA:-0.236213201983;STAT1,3:-0.242379479788;HAND1,2:-0.250458065369;XBP1:-0.272078376162;ALX4:-0.282300262587;ESR1:-0.286537541422;RFX1:-0.288199788407;SOX17:-0.313719526324;FOXD3:-0.323864470146;PAX2:-0.335443407688;PRRX1,2:-0.340535852126;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.38467014714;SREBF1,2:-0.388807143599;TLX2:-0.401948695838;LHX3,4:-0.41223694341;FOX{D1,D2}:-0.42375314999;HIF1A:-0.432249109931;FOXA2:-0.463945554298;CUX2:-0.469293071291;FOXP1:-0.47416033751;POU3F1..4:-0.485409926952;TFDP1:-0.489203031858;SPI1:-0.495356852546;E2F1..5:-0.495366213396;NRF1:-0.497637748627;FOXN1:-0.503626938037;LEF1_TCF7_TCF7L1,2:-0.508067405952;DBP:-0.508586408749;ESRRA:-0.543982889801;CEBPA,B_DDIT3:-0.550780802383;RUNX1..3:-0.553536789631;ETS1,2:-0.554808849315;MAFB:-0.575100899117;PAX8:-0.586344597582;RFX2..5_RFXANK_RFXAP:-0.588192328272;MEF2{A,B,C,D}:-0.605594185979;TGIF1:-0.606474130252;PBX1:-0.646361094764;NANOG:-0.646418633409;T:-0.646717435275;HES1:-0.64911037965;HOX{A6,A7,B6,B7}:-0.659367741079;NFY{A,B,C}:-0.688589414666;SPIB:-0.694525467986;CREB1:-0.697854904519;NKX2-2,8:-0.704585055994;PAX3,7:-0.724734361355;PITX1..3:-0.728270993235;ELF1,2,4:-0.751672811093;BPTF:-0.788127149857;ATF5_CREB3:-0.83384292433;ATF4:-0.856118731171;SOX{8,9,10}:-0.872584768798;NKX2-3_NKX2-5:-0.881666227982;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.959753673024;PDX1:-1.02364979051;RBPJ:-1.02395296608;BREu{core}:-1.03936671098;GFI1:-1.04479132601;FOX{F1,F2,J1}:-1.09788234284;VSX1,2:-1.14779323059;NR5A1,2:-1.17739013316;YY1:-1.17961052977;POU2F1..3:-1.20779635705;AHR_ARNT_ARNT2:-1.23540580578;POU5F1:-1.25537690104;MYB:-1.36498533576;RORA:-1.42813811832;NANOG{mouse}:-1.61659202764 | |top_motifs=GZF1:2.79865758957;EVI1:1.99204523786;NKX3-1:1.9211987188;GCM1,2:1.87250521376;TEF:1.78967219445;HOX{A5,B5}:1.6685262455;ONECUT1,2:1.64627801212;ZBTB6:1.41786651104;ZNF384:1.31983282222;CRX:1.3053453338;HSF1,2:1.29357744407;TFCP2:1.24245172698;PAX5:1.22708843818;TEAD1:1.12303278495;AIRE:1.09267761454;ZIC1..3:1.08328445731;MYBL2:1.08003775384;TOPORS:1.04038383552;UFEwm:1.02035110184;POU1F1:0.978410691465;XCPE1{core}:0.92534978577;GLI1..3:0.894587827946;GATA4:0.858294109635;NKX2-1,4:0.856508425471;MTE{core}:0.851132831754;NKX3-2:0.839861344562;PAX4:0.820670703143;RXR{A,B,G}:0.813082047707;EGR1..3:0.807169724465;HIC1:0.783293296503;NFE2L1:0.778810783217;MAZ:0.768271523382;TFAP2B:0.761298084153;NR3C1:0.74854718882;ZBTB16:0.712988974602;PRDM1:0.675499516126;SP1:0.661048162459;HOXA9_MEIS1:0.653917303737;GTF2A1,2:0.644001859614;EP300:0.624582471293;LMO2:0.623884687821;TLX1..3_NFIC{dimer}:0.612558008372;MZF1:0.610560903805;KLF4:0.603768769912;SMAD1..7,9:0.592094823199;SRF:0.591043349696;MTF1:0.569443621539;GTF2I:0.565617117089;STAT5{A,B}:0.516908284571;HOX{A4,D4}:0.502913151769;TP53:0.491190970284;ZNF423:0.488336512482;ARID5B:0.48685081165;NFATC1..3:0.471597884444;EN1,2:0.468290561193;SPZ1:0.418679772162;PAX1,9:0.390921520089;NFE2L2:0.387506593985;NR6A1:0.343059426732;MYOD1:0.34269723333;CDX1,2,4:0.34264696973;IKZF1:0.310403016005;FOXM1:0.303353258591;GFI1B:0.297941277517;ZNF148:0.279250604223;ZFP161:0.269166655954;RREB1:0.263449263787;NR1H4:0.252755033493;bHLH_family:0.248024911532;CDC5L:0.24303049123;POU6F1:0.240437179281;TFAP2{A,C}:0.236694967222;PAX6:0.226340644235;NKX6-1,2:0.20632867564;TAL1_TCF{3,4,12}:0.201871121107;TBX4,5:0.18063395378;NHLH1,2:0.163388171078;HBP1_HMGB_SSRP1_UBTF:0.127487001066;REST:0.119654823953;FOS_FOS{B,L1}_JUN{B,D}:0.11673162174;JUN:0.104657812459;MED-1{core}:0.102958043265;ADNP_IRX_SIX_ZHX:0.0968280825088;SOX2:0.0686093366607;FOSL2:0.0598563061152;FOX{I1,J2}:0.0574918571808;BACH2:0.0476551161928;MYFfamily:0.0303020698643;HLF:0.0277031759186;TBP:0.0216801605793;IKZF2:0.0171286631292;PATZ1:0.0165166215613;STAT2,4,6:0.0087185095945;HNF1A:0.00610637278896;ZNF143:-0.00394772862611;AR:-0.00530668754938;FOXO1,3,4:-0.00813131342033;HMGA1,2:-0.0219581049971;SNAI1..3:-0.02925807234;IRF7:-0.045678981328;HNF4A_NR2F1,2:-0.055461721046;TFAP4:-0.0607828536718;HMX1:-0.0736867612654;NFIX:-0.0746997446151;SOX5:-0.0809857326487;NFIL3:-0.0849849171939;ELK1,4_GABP{A,B1}:-0.093130938152;FOXQ1:-0.0950770023258;ATF6:-0.0971112770523;IRF1,2:-0.104358719517;OCT4_SOX2{dimer}:-0.116882881429;ZNF238:-0.133902592904;EBF1:-0.136956252854;ALX1:-0.140019335845;NFE2:-0.144293510507;FOXL1:-0.151026120612;ZEB1:-0.159084488888;ATF2:-0.183778013636;GATA6:-0.194644300074;FOXP3:-0.198140497793;RXRA_VDR{dimer}:-0.203279446995;PPARG:-0.20886819408;DMAP1_NCOR{1,2}_SMARC:-0.214854921895;NFKB1_REL_RELA:-0.236213201983;STAT1,3:-0.242379479788;HAND1,2:-0.250458065369;XBP1:-0.272078376162;ALX4:-0.282300262587;ESR1:-0.286537541422;RFX1:-0.288199788407;SOX17:-0.313719526324;FOXD3:-0.323864470146;PAX2:-0.335443407688;PRRX1,2:-0.340535852126;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.38467014714;SREBF1,2:-0.388807143599;TLX2:-0.401948695838;LHX3,4:-0.41223694341;FOX{D1,D2}:-0.42375314999;HIF1A:-0.432249109931;FOXA2:-0.463945554298;CUX2:-0.469293071291;FOXP1:-0.47416033751;POU3F1..4:-0.485409926952;TFDP1:-0.489203031858;SPI1:-0.495356852546;E2F1..5:-0.495366213396;NRF1:-0.497637748627;FOXN1:-0.503626938037;LEF1_TCF7_TCF7L1,2:-0.508067405952;DBP:-0.508586408749;ESRRA:-0.543982889801;CEBPA,B_DDIT3:-0.550780802383;RUNX1..3:-0.553536789631;ETS1,2:-0.554808849315;MAFB:-0.575100899117;PAX8:-0.586344597582;RFX2..5_RFXANK_RFXAP:-0.588192328272;MEF2{A,B,C,D}:-0.605594185979;TGIF1:-0.606474130252;PBX1:-0.646361094764;NANOG:-0.646418633409;T:-0.646717435275;HES1:-0.64911037965;HOX{A6,A7,B6,B7}:-0.659367741079;NFY{A,B,C}:-0.688589414666;SPIB:-0.694525467986;CREB1:-0.697854904519;NKX2-2,8:-0.704585055994;PAX3,7:-0.724734361355;PITX1..3:-0.728270993235;ELF1,2,4:-0.751672811093;BPTF:-0.788127149857;ATF5_CREB3:-0.83384292433;ATF4:-0.856118731171;SOX{8,9,10}:-0.872584768798;NKX2-3_NKX2-5:-0.881666227982;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.959753673024;PDX1:-1.02364979051;RBPJ:-1.02395296608;BREu{core}:-1.03936671098;GFI1:-1.04479132601;FOX{F1,F2,J1}:-1.09788234284;VSX1,2:-1.14779323059;NR5A1,2:-1.17739013316;YY1:-1.17961052977;POU2F1..3:-1.20779635705;AHR_ARNT_ARNT2:-1.23540580578;POU5F1:-1.25537690104;MYB:-1.36498533576;RORA:-1.42813811832;NANOG{mouse}:-1.61659202764 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11402-118D7;search_select_hide=table117:FF:11402-118D7 | |||
}} | }} | ||
Latest revision as of 17:58, 4 June 2020
| Name: | Mesothelial Cells, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12012 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | |||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12012
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12012
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0977 |
| 10 | 10 | 0.0168 |
| 100 | 100 | 0.324 |
| 101 | 101 | 0.933 |
| 102 | 102 | 0.535 |
| 103 | 103 | 0.915 |
| 104 | 104 | 0.289 |
| 105 | 105 | 0.251 |
| 106 | 106 | 0.0951 |
| 107 | 107 | 0.0175 |
| 108 | 108 | 0.868 |
| 109 | 109 | 0.179 |
| 11 | 11 | 0.577 |
| 110 | 110 | 0.621 |
| 111 | 111 | 0.00575 |
| 112 | 112 | 0.878 |
| 113 | 113 | 0.043 |
| 114 | 114 | 0.603 |
| 115 | 115 | 0.048 |
| 116 | 116 | 0.399 |
| 117 | 117 | 0.109 |
| 118 | 118 | 0.656 |
| 119 | 119 | 0.721 |
| 12 | 12 | 0.232 |
| 120 | 120 | 0.681 |
| 121 | 121 | 0.991 |
| 122 | 122 | 0.496 |
| 123 | 123 | 0.00182 |
| 124 | 124 | 0.235 |
| 125 | 125 | 0.194 |
| 126 | 126 | 0.207 |
| 127 | 127 | 0.724 |
| 128 | 128 | 0.0614 |
| 129 | 129 | 0.616 |
| 13 | 13 | 0.195 |
| 130 | 130 | 0.486 |
| 131 | 131 | 0.126 |
| 132 | 132 | 0.0353 |
| 133 | 133 | 0.204 |
| 134 | 134 | 0.937 |
| 135 | 135 | 0.0382 |
| 136 | 136 | 0.365 |
| 137 | 137 | 0.498 |
| 138 | 138 | 0.998 |
| 139 | 139 | 0.979 |
| 14 | 14 | 0.991 |
| 140 | 140 | 0.744 |
| 141 | 141 | 0.0283 |
| 142 | 142 | 0.168 |
| 143 | 143 | 0.272 |
| 144 | 144 | 0.445 |
| 145 | 145 | 0.445 |
| 146 | 146 | 0.228 |
| 147 | 147 | 0.36 |
| 148 | 148 | 0.742 |
| 149 | 149 | 0.494 |
| 15 | 15 | 0.601 |
| 150 | 150 | 0.179 |
| 151 | 151 | 0.867 |
| 152 | 152 | 0.00364 |
| 153 | 153 | 0.46 |
| 154 | 154 | 0.685 |
| 155 | 155 | 0.218 |
| 156 | 156 | 0.709 |
| 157 | 157 | 0.695 |
| 158 | 158 | 0.0183 |
| 159 | 159 | 0.778 |
| 16 | 16 | 0.367 |
| 160 | 160 | 0.809 |
| 161 | 161 | 0.963 |
| 162 | 162 | 0.345 |
| 163 | 163 | 0.0153 |
| 164 | 164 | 0.344 |
| 165 | 165 | 0.233 |
| 166 | 166 | 0.708 |
| 167 | 167 | 0.263 |
| 168 | 168 | 0.604 |
| 169 | 169 | 0.53 |
| 17 | 17 | 0.904 |
| 18 | 18 | 0.678 |
| 19 | 19 | 0.695 |
| 2 | 2 | 0.256 |
| 20 | 20 | 0.707 |
| 21 | 21 | 0.749 |
| 22 | 22 | 0.864 |
| 23 | 23 | 0.588 |
| 24 | 24 | 0.928 |
| 25 | 25 | 0.0342 |
| 26 | 26 | 0.539 |
| 27 | 27 | 0.833 |
| 28 | 28 | 0.599 |
| 29 | 29 | 0.515 |
| 3 | 3 | 0.47 |
| 30 | 30 | 0.353 |
| 31 | 31 | 0.95 |
| 32 | 32 | 0.211 |
| 33 | 33 | 0.335 |
| 34 | 34 | 0.844 |
| 35 | 35 | 0.107 |
| 36 | 36 | 0.00476 |
| 37 | 37 | 0.69 |
| 38 | 38 | 0.597 |
| 39 | 39 | 0.319 |
| 4 | 4 | 0.259 |
| 40 | 40 | 0.0432 |
| 41 | 41 | 0.0558 |
| 42 | 42 | 0.257 |
| 43 | 43 | 0.43 |
| 44 | 44 | 0.313 |
| 45 | 45 | 0.47 |
| 46 | 46 | 0.429 |
| 47 | 47 | 0.452 |
| 48 | 48 | 0.611 |
| 49 | 49 | 0.0706 |
| 5 | 5 | 0.0916 |
| 50 | 50 | 0.85 |
| 51 | 51 | 0.829 |
| 52 | 52 | 0.184 |
| 53 | 53 | 0.219 |
| 54 | 54 | 0.415 |
| 55 | 55 | 0.231 |
| 56 | 56 | 0.918 |
| 57 | 57 | 0.802 |
| 58 | 58 | 0.13 |
| 59 | 59 | 0.529 |
| 6 | 6 | 0.844 |
| 60 | 60 | 0.715 |
| 61 | 61 | 0.216 |
| 62 | 62 | 0.126 |
| 63 | 63 | 0.446 |
| 64 | 64 | 0.154 |
| 65 | 65 | 0.976 |
| 66 | 66 | 0.357 |
| 67 | 67 | 0.852 |
| 68 | 68 | 0.753 |
| 69 | 69 | 0.174 |
| 7 | 7 | 0.0349 |
| 70 | 70 | 0.308 |
| 71 | 71 | 0.0531 |
| 72 | 72 | 0.408 |
| 73 | 73 | 0.119 |
| 74 | 74 | 0.88 |
| 75 | 75 | 0.329 |
| 76 | 76 | 0.703 |
| 77 | 77 | 0.0264 |
| 78 | 78 | 0.652 |
| 79 | 79 | 0.0672 |
| 8 | 8 | 0.821 |
| 80 | 80 | 0.104 |
| 81 | 81 | 0.994 |
| 82 | 82 | 0.741 |
| 83 | 83 | 0.664 |
| 84 | 84 | 0.599 |
| 85 | 85 | 0.352 |
| 86 | 86 | 0.613 |
| 87 | 87 | 0.116 |
| 88 | 88 | 0.539 |
| 89 | 89 | 0.247 |
| 9 | 9 | 0.647 |
| 90 | 90 | 0.44 |
| 91 | 91 | 0.503 |
| 92 | 92 | 0.982 |
| 93 | 93 | 0.817 |
| 94 | 94 | 0.247 |
| 95 | 95 | 0.23 |
| 96 | 96 | 0.724 |
| 97 | 97 | 0.551 |
| 98 | 98 | 0.0764 |
| 99 | 99 | 0.0417 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12012
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000099 human mesothelial cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000076 (squamous epithelial cell)
0000213 (lining cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000077 (mesothelial cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000099 (human mesothelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)
