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(Created page with "{{f5samples |id=FF:11603-120I1 |name=Hepatocyte, donor2 |sample_id=11603 |rna_tube_id=120I1 |rna_box=120 |rna_position=I1 |sample_cell_lot=N/A |sample_cell_catalog=N/A...")
 
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{{f5samples
{{f5samples
|id=FF:11603-120I1
|DRA_sample_Accession=CAGE@SAMD00005065
|name=Hepatocyte, donor2
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005065
|sample_id=11603
|accession_numbers=CAGE;DRX008308;DRR009180;DRZ000605;DRZ001990;DRZ011955;DRZ013340
|rna_tube_id=120I1
|accession_numbers_RNASeq=sRNA-Seq;DRX037267;DRR041633;DRZ007275
|rna_box=120
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002107,UBERON:0002100,UBERON:0001007,UBERON:0004119,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002368,UBERON:0005177,UBERON:0002365,UBERON:0005172,UBERON:0006925,UBERON:0002530,UBERON:0010317,UBERON:0005173,UBERON:0002417,UBERON:0000949,UBERON:0002330,UBERON:0000916,UBERON:0002423
|rna_position=I1
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000181,CL:0000417,CL:0000668,CL:0000412,CL:0000255,CL:0000182
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Sciencell/3H
|rna_lot_number=
|rna_catalog_number=SC5205
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=liver
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=hepatocyte
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_weight_ug=10.00000
|rna_concentration=1ug/ul
|sample_note=
|profile_hcage=CNhs12349,LSID913,release011,MAPPING
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000066,CL:0000134,CL:0000144,CL:0000181,CL:0000182,CL:0000219,CL:0000220,CL:0000223,CL:0000255,CL:0000412,CL:0000414,CL:0000417,CL:0000548,CL:0000723,CL:0002320,CL:0002321,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000015,UBERON:0000061,UBERON:0000062,UBERON:0000077,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0000949,UBERON:0001007,UBERON:0001041,UBERON:0001048,UBERON:0001062,UBERON:0001555,UBERON:0002050,UBERON:0002100,UBERON:0002107,UBERON:0002330,UBERON:0002365,UBERON:0002368,UBERON:0002384,UBERON:0002405,UBERON:0002417,UBERON:0002423,UBERON:0002530,UBERON:0002532,UBERON:0003104,UBERON:0003894,UBERON:0004119,UBERON:0004120,UBERON:0004161,UBERON:0004185,UBERON:0004921,UBERON:0005057,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005256,UBERON:0005423,UBERON:0006235,UBERON:0006925,UBERON:0007026,UBERON:0008835,UBERON:0008836,UBERON:0009142
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000078
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
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|ffid_belonging_in_development=CL:0000134,CL:0000223
|fonse_cell_line=
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|fonse_cell_line_closure=
Line 67: Line 43:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hepatocyte%252c%2520donor2.CNhs12349.11603-120I1.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hepatocyte%252c%2520donor2.CNhs12349.11603-120I1.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hepatocyte%252c%2520donor2.CNhs12349.11603-120I1.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Hepatocyte%252c%2520donor2.CNhs12349.11603-120I1.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Hepatocyte%252c%2520donor2.CNhs12349.11603-120I1.hg38.nobarcode.ctss.bed.gz
|id=FF:11603-120I1
|is_a=EFO:0002091;;FF:0000078
|is_obsolete=
|library_id=CNhs12349
|library_id_phase_based=2:CNhs12349
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11603
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10066.AGTTCC.11603
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11603
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10066.AGTTCC.11603
|name=Hepatocyte, donor2
|namespace=FANTOM5
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|profile_hcage=CNhs12349,LSID913,release011,COMPLETED
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|rna_box=120
|rna_catalog_number=SC5205
|rna_concentration=1ug/ul
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=
|rna_od260/230=
|rna_od260/280=
|rna_position=I1
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=120I1
|rna_weight_ug=10
|rnaseq_library_id=SRhi10066.AGTTCC
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=hepatocyte
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.76440259327698e-243!GO:0005737;cytoplasm;2.59747599062432e-207!GO:0044444;cytoplasmic part;3.92778000692379e-180!GO:0043231;intracellular membrane-bound organelle;2.03624605492801e-137!GO:0043227;membrane-bound organelle;2.03624605492801e-137!GO:0043226;organelle;3.20105910827597e-124!GO:0043229;intracellular organelle;5.81058250695171e-124!GO:0044422;organelle part;1.64546660133098e-107!GO:0044446;intracellular organelle part;4.13873511727443e-106!GO:0005739;mitochondrion;1.89315709215999e-99!GO:0044237;cellular metabolic process;3.76143055039722e-81!GO:0044238;primary metabolic process;5.4583273382227e-73!GO:0031090;organelle membrane;5.36558893857165e-72!GO:0032991;macromolecular complex;1.58471225729826e-63!GO:0044429;mitochondrial part;4.68883116438311e-63!GO:0030529;ribonucleoprotein complex;5.40002905638171e-61!GO:0043233;organelle lumen;7.50442002695323e-61!GO:0031974;membrane-enclosed lumen;7.50442002695323e-61!GO:0009058;biosynthetic process;2.38419626936877e-58!GO:0044249;cellular biosynthetic process;2.72715012816356e-51!GO:0019538;protein metabolic process;2.02487879127419e-48!GO:0003723;RNA binding;3.22105401416426e-47!GO:0005515;protein binding;4.08340615103599e-47!GO:0031967;organelle envelope;1.87163161453284e-46!GO:0031975;envelope;3.41332893211256e-46!GO:0044260;cellular macromolecule metabolic process;5.67939606349155e-45!GO:0043170;macromolecule metabolic process;1.18667657391941e-43!GO:0044267;cellular protein metabolic process;1.61914819739844e-43!GO:0006412;translation;2.00263657676793e-42!GO:0033036;macromolecule localization;3.07169078130317e-40!GO:0009059;macromolecule biosynthetic process;4.30379410635464e-40!GO:0005829;cytosol;6.20476663053911e-40!GO:0005783;endoplasmic reticulum;7.92379328612196e-40!GO:0044428;nuclear part;1.44221537535563e-39!GO:0005840;ribosome;2.64481306153066e-39!GO:0015031;protein transport;2.09202935938518e-38!GO:0005740;mitochondrial envelope;9.14959722909791e-38!GO:0008104;protein localization;1.11542640028803e-37!GO:0045184;establishment of protein localization;2.22081487685689e-37!GO:0019866;organelle inner membrane;1.02451455079768e-36!GO:0031966;mitochondrial membrane;4.71116255091639e-36!GO:0016491;oxidoreductase activity;1.75813770967217e-35!GO:0005743;mitochondrial inner membrane;8.79909529304109e-35!GO:0006082;organic acid metabolic process;5.02793266390102e-33!GO:0003735;structural constituent of ribosome;8.12364291897499e-33!GO:0031980;mitochondrial lumen;1.92018911840438e-32!GO:0005759;mitochondrial matrix;1.92018911840438e-32!GO:0044432;endoplasmic reticulum part;3.57444722966601e-32!GO:0019752;carboxylic acid metabolic process;4.15764848090845e-32!GO:0006396;RNA processing;6.02306520524818e-31!GO:0043234;protein complex;8.40293592524417e-31!GO:0012505;endomembrane system;1.04896397333307e-30!GO:0044248;cellular catabolic process;6.18398253443177e-29!GO:0033279;ribosomal subunit;5.67553595642642e-28!GO:0046907;intracellular transport;1.04231393838962e-27!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.4040618817731e-27!GO:0005789;endoplasmic reticulum membrane;2.18626007019348e-27!GO:0006886;intracellular protein transport;4.27977108101772e-27!GO:0031981;nuclear lumen;1.90435481863815e-25!GO:0016071;mRNA metabolic process;2.35427544389261e-25!GO:0006091;generation of precursor metabolites and energy;8.17497920193314e-24!GO:0051186;cofactor metabolic process;2.68748098420148e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.83037079810633e-22!GO:0016043;cellular component organization and biogenesis;3.46198781374492e-22!GO:0008380;RNA splicing;4.07388174752641e-22!GO:0009055;electron carrier activity;1.19072818742388e-21!GO:0006397;mRNA processing;5.68855953154992e-21!GO:0065003;macromolecular complex assembly;3.46060218921449e-20!GO:0006119;oxidative phosphorylation;3.57614376631126e-20!GO:0009056;catabolic process;6.90586836684185e-20!GO:0044255;cellular lipid metabolic process;7.58998537137823e-20!GO:0006629;lipid metabolic process;4.04507830132681e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.71205309513651e-19!GO:0006732;coenzyme metabolic process;1.23010470344547e-18!GO:0016874;ligase activity;1.24627423788902e-18!GO:0051649;establishment of cellular localization;5.73203678837907e-18!GO:0000166;nucleotide binding;6.82406853577936e-18!GO:0048037;cofactor binding;7.87075506637314e-18!GO:0051641;cellular localization;1.2004814422878e-17!GO:0044455;mitochondrial membrane part;1.42303713226476e-17!GO:0006950;response to stress;1.47499608937955e-17!GO:0032787;monocarboxylic acid metabolic process;2.65922381482905e-17!GO:0005634;nucleus;6.92630735867511e-17!GO:0044445;cytosolic part;8.3842317890939e-17!GO:0022607;cellular component assembly;1.22878571600455e-16!GO:0006457;protein folding;1.92337475069439e-16!GO:0005681;spliceosome;3.68245642870238e-16!GO:0005746;mitochondrial respiratory chain;5.15439010214199e-16!GO:0044265;cellular macromolecule catabolic process;5.86515612866094e-16!GO:0015935;small ribosomal subunit;1.08293177013215e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.23853085965323e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;1.62672481456094e-15!GO:0016462;pyrophosphatase activity;2.07607105779825e-15!GO:0006807;nitrogen compound metabolic process;2.07607105779825e-15!GO:0006118;electron transport;2.78320989919108e-15!GO:0005654;nucleoplasm;8.62764960810644e-15!GO:0008219;cell death;8.62764960810644e-15!GO:0016265;death;8.62764960810644e-15!GO:0022618;protein-RNA complex assembly;9.21728968304812e-15!GO:0017111;nucleoside-triphosphatase activity;9.86278781987163e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.2481519333248e-14!GO:0012501;programmed cell death;1.42908840108632e-14!GO:0006915;apoptosis;1.73476384074444e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.81243904619366e-14!GO:0003954;NADH dehydrogenase activity;1.81243904619366e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.81243904619366e-14!GO:0000502;proteasome complex (sensu Eukaryota);2.03885656490292e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;3.0803573183974e-14!GO:0050662;coenzyme binding;5.39463107054742e-14!GO:0019941;modification-dependent protein catabolic process;6.47351572634645e-14!GO:0043632;modification-dependent macromolecule catabolic process;6.47351572634645e-14!GO:0006511;ubiquitin-dependent protein catabolic process;7.48496129401468e-14!GO:0044257;cellular protein catabolic process;7.48496129401468e-14!GO:0006605;protein targeting;8.17733604970257e-14!GO:0051082;unfolded protein binding;8.80252534916917e-14!GO:0005794;Golgi apparatus;9.22399560878384e-14!GO:0048770;pigment granule;1.02603593437888e-13!GO:0042470;melanosome;1.02603593437888e-13!GO:0002526;acute inflammatory response;1.36539786048335e-13!GO:0008135;translation factor activity, nucleic acid binding;1.69836746488407e-13!GO:0015934;large ribosomal subunit;2.30594382227961e-13!GO:0017076;purine nucleotide binding;2.75243944812387e-13!GO:0009308;amine metabolic process;3.78487629306768e-13!GO:0016787;hydrolase activity;4.57005466142575e-13!GO:0044451;nucleoplasm part;6.00521021898279e-13!GO:0008134;transcription factor binding;6.55195310301568e-13!GO:0030964;NADH dehydrogenase complex (quinone);7.45452354816336e-13!GO:0045271;respiratory chain complex I;7.45452354816336e-13!GO:0005747;mitochondrial respiratory chain complex I;7.45452354816336e-13!GO:0005761;mitochondrial ribosome;8.4060259280421e-13!GO:0000313;organellar ribosome;8.4060259280421e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.21132196864096e-12!GO:0042773;ATP synthesis coupled electron transport;1.21132196864096e-12!GO:0005730;nucleolus;1.4218576491514e-12!GO:0009057;macromolecule catabolic process;1.57143012587803e-12!GO:0043285;biopolymer catabolic process;1.65065092367344e-12!GO:0006520;amino acid metabolic process;1.92651380528817e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.16342584016328e-12!GO:0016192;vesicle-mediated transport;3.97860536480834e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.7399571925552e-12!GO:0048193;Golgi vesicle transport;5.84192462157252e-12!GO:0005793;ER-Golgi intermediate compartment;6.33299299090032e-12!GO:0006512;ubiquitin cycle;8.31497539735497e-12!GO:0006519;amino acid and derivative metabolic process;1.14991973273506e-11!GO:0010467;gene expression;6.11834340425161e-11!GO:0006413;translational initiation;1.03641266950342e-10!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;1.20703872734058e-10!GO:0006631;fatty acid metabolic process;1.20703872734058e-10!GO:0006446;regulation of translational initiation;1.2790519133431e-10!GO:0032553;ribonucleotide binding;1.69868297152388e-10!GO:0032555;purine ribonucleotide binding;1.69868297152388e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.76791139724588e-10!GO:0005768;endosome;2.10734298012677e-10!GO:0051188;cofactor biosynthetic process;2.45916400562717e-10!GO:0030554;adenyl nucleotide binding;2.88814802692522e-10!GO:0006066;alcohol metabolic process;2.88814802692522e-10!GO:0044262;cellular carbohydrate metabolic process;3.50939627575785e-10!GO:0043283;biopolymer metabolic process;3.53814192714252e-10!GO:0006913;nucleocytoplasmic transport;4.0294900056166e-10!GO:0030163;protein catabolic process;4.9828506440729e-10!GO:0005777;peroxisome;5.85114139952727e-10!GO:0042579;microbody;5.85114139952727e-10!GO:0016887;ATPase activity;6.96719222740221e-10!GO:0051169;nuclear transport;7.25929931498683e-10!GO:0003743;translation initiation factor activity;9.79227095650782e-10!GO:0006958;complement activation, classical pathway;1.2304714717719e-09!GO:0002541;activation of plasma proteins during acute inflammatory response;1.73130460012205e-09!GO:0006956;complement activation;1.73130460012205e-09!GO:0002455;humoral immune response mediated by circulating immunoglobulin;1.90523338528468e-09!GO:0005635;nuclear envelope;2.24141663608104e-09!GO:0042981;regulation of apoptosis;2.72402134663133e-09!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;3.12385635158483e-09!GO:0043067;regulation of programmed cell death;3.26614454820866e-09!GO:0016125;sterol metabolic process;3.30775990832869e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.35963088716661e-09!GO:0005773;vacuole;4.67674228092469e-09!GO:0006996;organelle organization and biogenesis;5.21698495069634e-09!GO:0006461;protein complex assembly;5.55978150973842e-09!GO:0043412;biopolymer modification;5.98108302085967e-09!GO:0046930;pore complex;6.02995925421342e-09!GO:0008610;lipid biosynthetic process;7.00236166659524e-09!GO:0046483;heterocycle metabolic process;7.19515902992409e-09!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.20754588149882e-09!GO:0009060;aerobic respiration;8.47651477707379e-09!GO:0016604;nuclear body;8.80351203544122e-09!GO:0017038;protein import;8.99728468793948e-09!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;9.92031745159503e-09!GO:0051187;cofactor catabolic process;1.13887808696594e-08!GO:0006084;acetyl-CoA metabolic process;1.61453636448841e-08!GO:0031965;nuclear membrane;1.95020951356159e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.34667977446602e-08!GO:0005792;microsome;2.69712191817837e-08!GO:0000323;lytic vacuole;2.81221449553692e-08!GO:0005764;lysosome;2.81221449553692e-08!GO:0009108;coenzyme biosynthetic process;2.99516764334552e-08!GO:0042598;vesicular fraction;3.16976309107957e-08!GO:0042254;ribosome biogenesis and assembly;3.20225298643019e-08!GO:0042623;ATPase activity, coupled;3.32665637586954e-08!GO:0008565;protein transporter activity;4.06826525110665e-08!GO:0008203;cholesterol metabolic process;4.24337846310035e-08!GO:0008202;steroid metabolic process;4.65732822528545e-08!GO:0045333;cellular respiration;5.60784951026083e-08!GO:0005524;ATP binding;7.51299259937535e-08!GO:0006099;tricarboxylic acid cycle;7.51299259937535e-08!GO:0046356;acetyl-CoA catabolic process;7.51299259937535e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;8.35186813575338e-08!GO:0000375;RNA splicing, via transesterification reactions;8.35186813575338e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.35186813575338e-08!GO:0032559;adenyl ribonucleotide binding;9.43576706016706e-08!GO:0044453;nuclear membrane part;9.61874057333308e-08!GO:0009259;ribonucleotide metabolic process;1.06283295058043e-07!GO:0008639;small protein conjugating enzyme activity;1.09309968874739e-07!GO:0043069;negative regulation of programmed cell death;1.21626651225823e-07!GO:0016607;nuclear speck;1.29650989771898e-07!GO:0006464;protein modification process;1.33170466536678e-07!GO:0003712;transcription cofactor activity;1.59744256268853e-07!GO:0009109;coenzyme catabolic process;1.72790870418181e-07!GO:0004842;ubiquitin-protein ligase activity;1.75384073122196e-07!GO:0043066;negative regulation of apoptosis;1.87505351744283e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.95810735416156e-07!GO:0016740;transferase activity;2.28875242573242e-07!GO:0006399;tRNA metabolic process;2.51474601198453e-07!GO:0044270;nitrogen compound catabolic process;2.53408260265307e-07!GO:0019829;cation-transporting ATPase activity;3.74227242042322e-07!GO:0006752;group transfer coenzyme metabolic process;5.28945865526223e-07!GO:0015986;ATP synthesis coupled proton transport;5.34201584920408e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.34201584920408e-07!GO:0006163;purine nucleotide metabolic process;5.4178755283881e-07!GO:0006888;ER to Golgi vesicle-mediated transport;6.05734577701082e-07!GO:0019787;small conjugating protein ligase activity;6.32646746174992e-07!GO:0015980;energy derivation by oxidation of organic compounds;6.36387337965632e-07!GO:0009063;amino acid catabolic process;6.80893676953961e-07!GO:0043228;non-membrane-bound organelle;7.32639445012629e-07!GO:0043232;intracellular non-membrane-bound organelle;7.32639445012629e-07!GO:0005839;proteasome core complex (sensu Eukaryota);1.20799864645916e-06!GO:0009260;ribonucleotide biosynthetic process;1.28692011952828e-06!GO:0051246;regulation of protein metabolic process;1.32872431480283e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.34921667988578e-06!GO:0009310;amine catabolic process;1.39068132191777e-06!GO:0030120;vesicle coat;1.51739484536248e-06!GO:0030662;coated vesicle membrane;1.51739484536248e-06!GO:0065002;intracellular protein transport across a membrane;1.56783842616374e-06!GO:0016126;sterol biosynthetic process;1.67210161255539e-06!GO:0009150;purine ribonucleotide metabolic process;1.83182331117948e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.94871119119504e-06!GO:0005975;carbohydrate metabolic process;2.00975854019923e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.04890884208244e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.04890884208244e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.04890884208244e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.1436323680831e-06!GO:0009144;purine nucleoside triphosphate metabolic process;2.1436323680831e-06!GO:0005643;nuclear pore;2.28335300217342e-06!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.47186110419063e-06!GO:0006164;purine nucleotide biosynthetic process;2.65362891588996e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.74233400178647e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.74233400178647e-06!GO:0006695;cholesterol biosynthetic process;3.02406623463144e-06!GO:0006259;DNA metabolic process;3.03255762000768e-06!GO:0009141;nucleoside triphosphate metabolic process;3.05043283950528e-06!GO:0006869;lipid transport;3.2318243336117e-06!GO:0016064;immunoglobulin mediated immune response;3.39275904488295e-06!GO:0043038;amino acid activation;3.66379057680272e-06!GO:0006418;tRNA aminoacylation for protein translation;3.66379057680272e-06!GO:0043039;tRNA aminoacylation;3.66379057680272e-06!GO:0046034;ATP metabolic process;3.6949702147897e-06!GO:0043687;post-translational protein modification;3.77701213384849e-06!GO:0005770;late endosome;4.20839885469399e-06!GO:0005506;iron ion binding;4.35938998815552e-06!GO:0005319;lipid transporter activity;4.37365422778777e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.37365422778777e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.37365422778777e-06!GO:0016881;acid-amino acid ligase activity;4.69022906330631e-06!GO:0006754;ATP biosynthetic process;6.03646719763124e-06!GO:0006753;nucleoside phosphate metabolic process;6.03646719763124e-06!GO:0004298;threonine endopeptidase activity;6.13041131248361e-06!GO:0019439;aromatic compound catabolic process;6.2743733845474e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.56897382300722e-06!GO:0044440;endosomal part;6.752503678004e-06!GO:0010008;endosome membrane;6.752503678004e-06!GO:0019724;B cell mediated immunity;7.20678435251157e-06!GO:0002253;activation of immune response;7.71847447925987e-06!GO:0016853;isomerase activity;8.06040248747964e-06!GO:0051170;nuclear import;8.25161927951025e-06!GO:0004386;helicase activity;8.59549285033118e-06!GO:0009152;purine ribonucleotide biosynthetic process;8.75395577177907e-06!GO:0044431;Golgi apparatus part;9.56105195933174e-06!GO:0048523;negative regulation of cellular process;9.82169206091187e-06!GO:0009719;response to endogenous stimulus;9.89237718042548e-06!GO:0031982;vesicle;1.11106246748015e-05!GO:0006606;protein import into nucleus;1.13489208879177e-05!GO:0008026;ATP-dependent helicase activity;1.19077748220844e-05!GO:0019899;enzyme binding;1.24951404074426e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.27186683198032e-05!GO:0031988;membrane-bound vesicle;1.4698915781191e-05!GO:0031410;cytoplasmic vesicle;1.58871811460502e-05!GO:0045454;cell redox homeostasis;1.59315635165818e-05!GO:0051287;NAD binding;1.62926214796793e-05!GO:0006916;anti-apoptosis;1.8718365988097e-05!GO:0007243;protein kinase cascade;1.88256218084685e-05!GO:0050657;nucleic acid transport;1.94667105650491e-05!GO:0051236;establishment of RNA localization;1.94667105650491e-05!GO:0050658;RNA transport;1.94667105650491e-05!GO:0045259;proton-transporting ATP synthase complex;1.98401391469754e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.05106587157619e-05!GO:0016023;cytoplasmic membrane-bound vesicle;2.06244020918752e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.10972832928611e-05!GO:0050660;FAD binding;2.27723896658762e-05!GO:0003714;transcription corepressor activity;2.31471024343223e-05!GO:0048475;coated membrane;2.3581678403027e-05!GO:0030117;membrane coat;2.3581678403027e-05!GO:0048519;negative regulation of biological process;2.45209687312637e-05!GO:0007005;mitochondrion organization and biogenesis;2.51639233009726e-05!GO:0006366;transcription from RNA polymerase II promoter;2.518812773318e-05!GO:0006403;RNA localization;2.57978725271728e-05!GO:0008654;phospholipid biosynthetic process;2.66303513529918e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.76559021221908e-05!GO:0015399;primary active transmembrane transporter activity;2.76559021221908e-05!GO:0000096;sulfur amino acid metabolic process;2.91260170407184e-05!GO:0005798;Golgi-associated vesicle;2.93372069614983e-05!GO:0005788;endoplasmic reticulum lumen;3.02179569554107e-05!GO:0032446;protein modification by small protein conjugation;3.35560562086896e-05!GO:0006979;response to oxidative stress;3.63263502201794e-05!GO:0006364;rRNA processing;4.07427562782087e-05!GO:0006613;cotranslational protein targeting to membrane;4.22073151006912e-05!GO:0051789;response to protein stimulus;4.40191542001366e-05!GO:0006986;response to unfolded protein;4.40191542001366e-05!GO:0030532;small nuclear ribonucleoprotein complex;4.42411037507013e-05!GO:0051540;metal cluster binding;4.52807778180062e-05!GO:0051536;iron-sulfur cluster binding;4.52807778180062e-05!GO:0005996;monosaccharide metabolic process;4.64725928160734e-05!GO:0003924;GTPase activity;5.29021796367461e-05!GO:0016072;rRNA metabolic process;5.3144751497765e-05!GO:0008652;amino acid biosynthetic process;5.38905322227077e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.59832268785737e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.8010136291514e-05!GO:0005525;GTP binding;5.91324936086761e-05!GO:0016567;protein ubiquitination;5.92275093664461e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.099935397457e-05!GO:0005762;mitochondrial large ribosomal subunit;6.69845067281081e-05!GO:0000315;organellar large ribosomal subunit;6.69845067281081e-05!GO:0019842;vitamin binding;6.81677980060728e-05!GO:0009069;serine family amino acid metabolic process;7.61091614867485e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.61754256893237e-05!GO:0042802;identical protein binding;8.02510743846078e-05!GO:0019318;hexose metabolic process;8.71641594051701e-05!GO:0046870;cadmium ion binding;8.75461659084492e-05!GO:0031968;organelle outer membrane;8.94533270563883e-05!GO:0016829;lyase activity;9.74277859291851e-05!GO:0048471;perinuclear region of cytoplasm;0.000103295545019106!GO:0009117;nucleotide metabolic process;0.000104113042383934!GO:0030867;rough endoplasmic reticulum membrane;0.000107569669479042!GO:0019867;outer membrane;0.00010933853531569!GO:0005791;rough endoplasmic reticulum;0.000110536574701339!GO:0046983;protein dimerization activity;0.000118952426114173!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.000122649226577411!GO:0016564;transcription repressor activity;0.000126337656897582!GO:0002449;lymphocyte mediated immunity;0.000129823206493379!GO:0009611;response to wounding;0.000130299606704585!GO:0006953;acute-phase response;0.000134644349516558!GO:0031324;negative regulation of cellular metabolic process;0.000141112685513623!GO:0003724;RNA helicase activity;0.00014136692437676!GO:0006790;sulfur metabolic process;0.000141767992956618!GO:0006635;fatty acid beta-oxidation;0.00015062324127604!GO:0006793;phosphorus metabolic process;0.000170341848232349!GO:0006796;phosphate metabolic process;0.000170341848232349!GO:0016044;membrane organization and biogenesis;0.000175380032374434!GO:0006508;proteolysis;0.000175396243265978!GO:0005741;mitochondrial outer membrane;0.000183651184733447!GO:0006612;protein targeting to membrane;0.000185977321890407!GO:0042157;lipoprotein metabolic process;0.000193302771246132!GO:0000139;Golgi membrane;0.000194236460092034!GO:0043492;ATPase activity, coupled to movement of substances;0.000211165026253372!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000222159878136384!GO:0051028;mRNA transport;0.000234840347108604!GO:0019395;fatty acid oxidation;0.000256088849044618!GO:0030170;pyridoxal phosphate binding;0.000285244057666414!GO:0015918;sterol transport;0.000295699765757899!GO:0030301;cholesterol transport;0.000295699765757899!GO:0002443;leukocyte mediated immunity;0.000303006482047399!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000312243751295397!GO:0006006;glucose metabolic process;0.000319277624199797!GO:0000314;organellar small ribosomal subunit;0.000320267064167731!GO:0005763;mitochondrial small ribosomal subunit;0.000320267064167731!GO:0006957;complement activation, alternative pathway;0.000325540699638921!GO:0044438;microbody part;0.000334250366941866!GO:0044439;peroxisomal part;0.000334250366941866!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000346765172479534!GO:0043021;ribonucleoprotein binding;0.000386125110820549!GO:0009074;aromatic amino acid family catabolic process;0.000398996538140752!GO:0016741;transferase activity, transferring one-carbon groups;0.000417140881272397!GO:0006725;aromatic compound metabolic process;0.000446143021304161!GO:0000151;ubiquitin ligase complex;0.000485377197426299!GO:0043566;structure-specific DNA binding;0.00050310123958984!GO:0032561;guanyl ribonucleotide binding;0.000520869940226023!GO:0019001;guanyl nucleotide binding;0.000520869940226023!GO:0051384;response to glucocorticoid stimulus;0.00056140317019078!GO:0000245;spliceosome assembly;0.00057783859395849!GO:0022890;inorganic cation transmembrane transporter activity;0.000611075571670783!GO:0006974;response to DNA damage stimulus;0.000618952790903372!GO:0042221;response to chemical stimulus;0.000629340199965548!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000665302720727243!GO:0043284;biopolymer biosynthetic process;0.000694103642395001!GO:0051920;peroxiredoxin activity;0.000705247823581653!GO:0031903;microbody membrane;0.00071169446306226!GO:0005778;peroxisomal membrane;0.00071169446306226!GO:0016769;transferase activity, transferring nitrogenous groups;0.000783400465221258!GO:0019843;rRNA binding;0.00083071196588169!GO:0031252;leading edge;0.000855111841189033!GO:0051539;4 iron, 4 sulfur cluster binding;0.000900246212486945!GO:0000097;sulfur amino acid biosynthetic process;0.000902459306101257!GO:0009112;nucleobase metabolic process;0.000907644224461806!GO:0043623;cellular protein complex assembly;0.000958197464538339!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00099407983465801!GO:0009892;negative regulation of metabolic process;0.00105445788862512!GO:0006558;L-phenylalanine metabolic process;0.00107141854173086!GO:0006559;L-phenylalanine catabolic process;0.00107141854173086!GO:0030133;transport vesicle;0.00107141854173086!GO:0006650;glycerophospholipid metabolic process;0.00108846107417778!GO:0003713;transcription coactivator activity;0.00108906284762352!GO:0043681;protein import into mitochondrion;0.00109788757649539!GO:0005774;vacuolar membrane;0.00113630931081107!GO:0046394;carboxylic acid biosynthetic process;0.00114062910873057!GO:0016053;organic acid biosynthetic process;0.00114062910873057!GO:0008186;RNA-dependent ATPase activity;0.0011813872813653!GO:0006414;translational elongation;0.00120161902670676!GO:0006417;regulation of translation;0.00124771584158831!GO:0008286;insulin receptor signaling pathway;0.00127603408030677!GO:0031960;response to corticosteroid stimulus;0.00128011393349197!GO:0044272;sulfur compound biosynthetic process;0.00138344433143377!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00138344433143377!GO:0001889;liver development;0.00146083325301333!GO:0030176;integral to endoplasmic reticulum membrane;0.0015022739182356!GO:0006778;porphyrin metabolic process;0.00151018181279762!GO:0033013;tetrapyrrole metabolic process;0.00151018181279762!GO:0033116;ER-Golgi intermediate compartment membrane;0.00151299580979309!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00160412757534473!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00160412757534473!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00160412757534473!GO:0008483;transaminase activity;0.00161205780341329!GO:0019438;aromatic compound biosynthetic process;0.00163649529265002!GO:0048518;positive regulation of biological process;0.00170421554759887!GO:0016746;transferase activity, transferring acyl groups;0.00171636354483341!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.00171743674236811!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00172249800713672!GO:0008168;methyltransferase activity;0.00179390154609964!GO:0051427;hormone receptor binding;0.001904587172267!GO:0016885;ligase activity, forming carbon-carbon bonds;0.00194578380855099!GO:0016310;phosphorylation;0.00194622854003548!GO:0016197;endosome transport;0.00196658667145157!GO:0006518;peptide metabolic process;0.00206169417822125!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00210005654055458!GO:0006694;steroid biosynthetic process;0.00210102861263742!GO:0002252;immune effector process;0.00213685137925535!GO:0031326;regulation of cellular biosynthetic process;0.00214637383082204!GO:0003995;acyl-CoA dehydrogenase activity;0.00215053594366634!GO:0005579;membrane attack complex;0.00218279296404672!GO:0006954;inflammatory response;0.00233135668324102!GO:0051716;cellular response to stimulus;0.00243988626611504!GO:0010033;response to organic substance;0.00248730840474726!GO:0000049;tRNA binding;0.00248953580837812!GO:0030134;ER to Golgi transport vesicle;0.00252467655499637!GO:0005765;lysosomal membrane;0.00263088050499362!GO:0051168;nuclear export;0.00264350351599468!GO:0004177;aminopeptidase activity;0.00274243268079979!GO:0016747;transferase activity, transferring groups other than amino-acyl groups;0.00284279371611556!GO:0006879;cellular iron ion homeostasis;0.00284918199643709!GO:0055072;iron ion homeostasis;0.00284918199643709!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00296400026864756!GO:0005769;early endosome;0.00307049797258603!GO:0009064;glutamine family amino acid metabolic process;0.00314921111695218!GO:0004004;ATP-dependent RNA helicase activity;0.00316697537143701!GO:0044437;vacuolar part;0.00316697537143701!GO:0006767;water-soluble vitamin metabolic process;0.00319168334202237!GO:0006749;glutathione metabolic process;0.00321814416097814!GO:0043065;positive regulation of apoptosis;0.00328876525770335!GO:0016408;C-acyltransferase activity;0.00330517102530457!GO:0051537;2 iron, 2 sulfur cluster binding;0.00331171974074478!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.00331911190061235!GO:0003697;single-stranded DNA binding;0.0034456306178627!GO:0051659;maintenance of mitochondrion localization;0.0034456306178627!GO:0051657;maintenance of organelle localization;0.0034456306178627!GO:0006959;humoral immune response;0.00345355404374121!GO:0035257;nuclear hormone receptor binding;0.00345385087544119!GO:0065009;regulation of a molecular function;0.00357937567858517!GO:0030127;COPII vesicle coat;0.0035801949349108!GO:0012507;ER to Golgi transport vesicle membrane;0.0035801949349108!GO:0006525;arginine metabolic process;0.00358421740646946!GO:0030139;endocytic vesicle;0.00368846024211594!GO:0046364;monosaccharide biosynthetic process;0.00376156405748172!GO:0046165;alcohol biosynthetic process;0.00376156405748172!GO:0004300;enoyl-CoA hydratase activity;0.00387303168299833!GO:0030658;transport vesicle membrane;0.00391491426730517!GO:0009889;regulation of biosynthetic process;0.00421179248187008!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00433668662950276!GO:0043068;positive regulation of programmed cell death;0.00438557186953777!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.00459839383254116!GO:0016830;carbon-carbon lyase activity;0.00460860724211012!GO:0008430;selenium binding;0.00467557349789406!GO:0031970;organelle envelope lumen;0.00469016199322517!GO:0045947;negative regulation of translational initiation;0.00483626161907548!GO:0009165;nucleotide biosynthetic process;0.00485438874292585!GO:0008415;acyltransferase activity;0.00494991340703394!GO:0002250;adaptive immune response;0.00494991340703394!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.00494991340703394!GO:0006644;phospholipid metabolic process;0.00494991340703394!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00494991340703394!GO:0015002;heme-copper terminal oxidase activity;0.00494991340703394!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00494991340703394!GO:0004129;cytochrome-c oxidase activity;0.00494991340703394!GO:0005885;Arp2/3 protein complex;0.00503860209179488!GO:0003690;double-stranded DNA binding;0.00504258787311525!GO:0006402;mRNA catabolic process;0.00505131093948712!GO:0042559;pteridine and derivative biosynthetic process;0.00511841739805899!GO:0046474;glycerophospholipid biosynthetic process;0.00511841739805899!GO:0006595;polyamine metabolic process;0.00525655284484963!GO:0005048;signal sequence binding;0.00552745939918527!GO:0031072;heat shock protein binding;0.00564061422913451!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00568319836131918!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00579186938028915!GO:0006658;phosphatidylserine metabolic process;0.00593800518688166!GO:0030663;COPI coated vesicle membrane;0.00599307759440286!GO:0030126;COPI vesicle coat;0.00599307759440286!GO:0008632;apoptotic program;0.00602289018631972!GO:0003746;translation elongation factor activity;0.00603231077427045!GO:0016779;nucleotidyltransferase activity;0.0060846267326425!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00619741638816021!GO:0030569;chymotrypsin inhibitor activity;0.00630590313848232!GO:0019319;hexose biosynthetic process;0.00635984867905612!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00646863745374515!GO:0002684;positive regulation of immune system process;0.00668373264246006!GO:0016421;CoA carboxylase activity;0.00669610020037229!GO:0005758;mitochondrial intermembrane space;0.00675234780134138!GO:0042558;pteridine and derivative metabolic process;0.00676177077579757!GO:0042168;heme metabolic process;0.00677438306219987!GO:0030880;RNA polymerase complex;0.00694436148394446!GO:0048500;signal recognition particle;0.00697959926504243!GO:0016859;cis-trans isomerase activity;0.00700444930902207!GO:0006720;isoprenoid metabolic process;0.00704075311656038!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00716217994774942!GO:0001666;response to hypoxia;0.00774644986398016!GO:0016568;chromatin modification;0.0077464539153452!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00775426276756624!GO:0009081;branched chain family amino acid metabolic process;0.00786759450330982!GO:0030132;clathrin coat of coated pit;0.00793010777915318!GO:0051087;chaperone binding;0.00793856078052869!GO:0003729;mRNA binding;0.00801104892693617!GO:0006897;endocytosis;0.00801850507388354!GO:0010324;membrane invagination;0.00801850507388354!GO:0009066;aspartate family amino acid metabolic process;0.00802763067764916!GO:0033554;cellular response to stress;0.00835843376013356!GO:0048522;positive regulation of cellular process;0.00846948431733809!GO:0006984;ER-nuclear signaling pathway;0.00861119861995317!GO:0015036;disulfide oxidoreductase activity;0.00889906728891945!GO:0007040;lysosome organization and biogenesis;0.00907750758028232!GO:0006090;pyruvate metabolic process;0.00918506114275796!GO:0007596;blood coagulation;0.00920599674249125!GO:0005577;fibrinogen complex;0.00922022193245509!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00946200232772298!GO:0031406;carboxylic acid binding;0.00963711388198946!GO:0006891;intra-Golgi vesicle-mediated transport;0.00999510608682243!GO:0030660;Golgi-associated vesicle membrane;0.0102142525076852!GO:0005905;coated pit;0.0102142525076852!GO:0007599;hemostasis;0.010243943232257!GO:0009991;response to extracellular stimulus;0.0104648671102172!GO:0006401;RNA catabolic process;0.0105355422021575!GO:0050778;positive regulation of immune response;0.0107528369174613!GO:0002682;regulation of immune system process;0.0109122128893812!GO:0006818;hydrogen transport;0.011035728759495!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.0110827990454895!GO:0006487;protein amino acid N-linked glycosylation;0.0111117438205945!GO:0006643;membrane lipid metabolic process;0.0113623418050117!GO:0006325;establishment and/or maintenance of chromatin architecture;0.0116790056615215!GO:0007264;small GTPase mediated signal transduction;0.011757184787517!GO:0006563;L-serine metabolic process;0.0117910900852984!GO:0008299;isoprenoid biosynthetic process;0.0120679327511755!GO:0008312;7S RNA binding;0.0120804960887647!GO:0008139;nuclear localization sequence binding;0.0120935630590945!GO:0007006;mitochondrial membrane organization and biogenesis;0.0121322043760687!GO:0009070;serine family amino acid biosynthetic process;0.0121322043760687!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0122682996834086!GO:0045047;protein targeting to ER;0.0122682996834086!GO:0000041;transition metal ion transport;0.0123891595512659!GO:0015923;mannosidase activity;0.0124361976903955!GO:0030433;ER-associated protein catabolic process;0.0125678999545264!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0125678999545264!GO:0031301;integral to organelle membrane;0.0126553413506857!GO:0009374;biotin binding;0.0128227996102339!GO:0046467;membrane lipid biosynthetic process;0.0128650768328471!GO:0016563;transcription activator activity;0.0129136817539753!GO:0006354;RNA elongation;0.0132037824886746!GO:0008033;tRNA processing;0.0133529886800029!GO:0005667;transcription factor complex;0.0135697166137886!GO:0006081;aldehyde metabolic process;0.0137172287001424!GO:0046146;tetrahydrobiopterin metabolic process;0.0137904465254143!GO:0010035;response to inorganic substance;0.0137904465254143!GO:0050817;coagulation;0.014214494830294!GO:0016811;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides;0.0142749693593341!GO:0006633;fatty acid biosynthetic process;0.0143303078646019!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.014526260486106!GO:0000428;DNA-directed RNA polymerase complex;0.014526260486106!GO:0003756;protein disulfide isomerase activity;0.0149154531630823!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0149154531630823!GO:0043433;negative regulation of transcription factor activity;0.0151188653092445!GO:0030137;COPI-coated vesicle;0.0154991785532073!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0159396742887795!GO:0006626;protein targeting to mitochondrion;0.0159808914737952!GO:0006917;induction of apoptosis;0.016125412293061!GO:0006779;porphyrin biosynthetic process;0.0161924788207536!GO:0033014;tetrapyrrole biosynthetic process;0.0161924788207536!GO:0015992;proton transport;0.0162391764608264!GO:0006766;vitamin metabolic process;0.0164079129108006!GO:0043488;regulation of mRNA stability;0.0166841755251847!GO:0043487;regulation of RNA stability;0.0166841755251847!GO:0006810;transport;0.0167698255976605!GO:0006534;cysteine metabolic process;0.0170057719487874!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.017165584033713!GO:0004576;oligosaccharyl transferase activity;0.0172410507817255!GO:0009083;branched chain family amino acid catabolic process;0.0173148181151081!GO:0055088;lipid homeostasis;0.0174720739534919!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0178418372413396!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0178418372413396!GO:0006206;pyrimidine base metabolic process;0.0179109658725285!GO:0031668;cellular response to extracellular stimulus;0.0179936969377548!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0183671537914567!GO:0035035;histone acetyltransferase binding;0.0186094603163673!GO:0048487;beta-tubulin binding;0.0187236560813567!GO:0007049;cell cycle;0.0187261970617964!GO:0048468;cell development;0.0188526556685944!GO:0006527;arginine catabolic process;0.0188573373999243!GO:0006281;DNA repair;0.018925282261613!GO:0031902;late endosome membrane;0.0191786570496129!GO:0006323;DNA packaging;0.0192226746889969!GO:0003899;DNA-directed RNA polymerase activity;0.0192262571589628!GO:0046489;phosphoinositide biosynthetic process;0.0193265675155649!GO:0031647;regulation of protein stability;0.0196101343977788!GO:0031327;negative regulation of cellular biosynthetic process;0.0199248446410801!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0199866664167639!GO:0005507;copper ion binding;0.0200335188837517!GO:0042627;chylomicron;0.020092622059422!GO:0006260;DNA replication;0.020401955013049!GO:0012502;induction of programmed cell death;0.0205299559976483!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0210280114560787!GO:0045786;negative regulation of progression through cell cycle;0.0211163307219632!GO:0051252;regulation of RNA metabolic process;0.0211899075631813!GO:0016407;acetyltransferase activity;0.0213644967355763!GO:0008234;cysteine-type peptidase activity;0.0214020644351273!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0214050101404898!GO:0050749;apolipoprotein E receptor binding;0.0214235274064334!GO:0016791;phosphoric monoester hydrolase activity;0.0215493896827248!GO:0044452;nucleolar part;0.0216236342761647!GO:0001726;ruffle;0.0217660518766497!GO:0008361;regulation of cell size;0.0224041356187718!GO:0004448;isocitrate dehydrogenase activity;0.0224298985999018!GO:0046904;calcium oxalate binding;0.0224298985999018!GO:0030568;plasmin inhibitor activity;0.0224298985999018!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0226334737718775!GO:0001558;regulation of cell growth;0.0226894679301374!GO:0030518;steroid hormone receptor signaling pathway;0.022855255319181!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0233611235172232!GO:0006572;tyrosine catabolic process;0.0234477197367084!GO:0016049;cell growth;0.0236538208947215!GO:0051101;regulation of DNA binding;0.0244478137331068!GO:0009725;response to hormone stimulus;0.0245080810881216!GO:0007033;vacuole organization and biogenesis;0.0245259481269934!GO:0016481;negative regulation of transcription;0.0252149935508446!GO:0006022;aminoglycan metabolic process;0.0252278964344678!GO:0050776;regulation of immune response;0.0252534046892847!GO:0033344;cholesterol efflux;0.0252534046892847!GO:0016645;oxidoreductase activity, acting on the CH-NH group of donors;0.0253010189337121!GO:0051726;regulation of cell cycle;0.025392824145879!GO:0005869;dynactin complex;0.025392824145879!GO:0000062;acyl-CoA binding;0.0254759839068695!GO:0050748;negative regulation of lipoprotein metabolic process;0.0255192017635457!GO:0006596;polyamine biosynthetic process;0.0259722514451525!GO:0006094;gluconeogenesis;0.0263033693741482!GO:0032940;secretion by cell;0.0265305399320346!GO:0016051;carbohydrate biosynthetic process;0.0266471822765631!GO:0009309;amine biosynthetic process;0.0267549963465754!GO:0015886;heme transport;0.027571803963687!GO:0006892;post-Golgi vesicle-mediated transport;0.027571803963687!GO:0016836;hydro-lyase activity;0.0281572106654375!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0283985590395306!GO:0000059;protein import into nucleus, docking;0.0285397829444389!GO:0005684;U2-dependent spliceosome;0.0285397829444389!GO:0000074;regulation of progression through cell cycle;0.0285397829444389!GO:0008629;induction of apoptosis by intracellular signals;0.0288322965784391!GO:0008320;protein transmembrane transporter activity;0.0288788607710604!GO:0030503;regulation of cell redox homeostasis;0.0290321181715952!GO:0009225;nucleotide-sugar metabolic process;0.0297151836504578!GO:0008250;oligosaccharyl transferase complex;0.0299480653902447!GO:0018193;peptidyl-amino acid modification;0.0301982815069949!GO:0030118;clathrin coat;0.030447547676715!GO:0051234;establishment of localization;0.0307713816540673!GO:0005159;insulin-like growth factor receptor binding;0.0311685006655618!GO:0016363;nuclear matrix;0.031470381794441!GO:0016810;hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds;0.031470381794441!GO:0015682;ferric iron transport;0.0315882382861081!GO:0015091;ferric iron transmembrane transporter activity;0.0315882382861081!GO:0031643;positive regulation of myelination;0.0315882382861081!GO:0016877;ligase activity, forming carbon-sulfur bonds;0.0323815243281204!GO:0043022;ribosome binding;0.0325356640332226!GO:0006839;mitochondrial transport;0.0325608945604441!GO:0017166;vinculin binding;0.0329219757050132!GO:0007034;vacuolar transport;0.0336598793172092!GO:0003711;transcription elongation regulator activity;0.0337267867103858!GO:0016835;carbon-oxygen lyase activity;0.0339515270977536!GO:0045045;secretory pathway;0.0343533300679036!GO:0008383;manganese superoxide dismutase activity;0.0346349203953871!GO:0001315;age-dependent response to reactive oxygen species;0.0346349203953871!GO:0006611;protein export from nucleus;0.0346577042634983!GO:0042060;wound healing;0.0356154206583284!GO:0051248;negative regulation of protein metabolic process;0.035634390689012!GO:0051336;regulation of hydrolase activity;0.0357465025632918!GO:0007265;Ras protein signal transduction;0.0362750356513635!GO:0031667;response to nutrient levels;0.0362750356513635!GO:0050811;GABA receptor binding;0.0362750356513635!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0364275724299631!GO:0031300;intrinsic to organelle membrane;0.0364275724299631!GO:0051098;regulation of binding;0.0367218309494118!GO:0042158;lipoprotein biosynthetic process;0.0374194120050683!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0374655570527849!GO:0016831;carboxy-lyase activity;0.0374655570527849!GO:0004372;glycine hydroxymethyltransferase activity;0.0382046024508652!GO:0006516;glycoprotein catabolic process;0.0386312780865343!GO:0008538;proteasome activator activity;0.0388583185380055!GO:0000209;protein polyubiquitination;0.0390384650202831!GO:0007030;Golgi organization and biogenesis;0.0393060626801991!GO:0016788;hydrolase activity, acting on ester bonds;0.0397400218974955!GO:0030659;cytoplasmic vesicle membrane;0.0404393872643031!GO:0004680;casein kinase activity;0.0404393872643031!GO:0009890;negative regulation of biosynthetic process;0.0404393872643031!GO:0042364;water-soluble vitamin biosynthetic process;0.0404393872643031!GO:0042594;response to starvation;0.0404393872643031!GO:0051235;maintenance of localization;0.0404393872643031!GO:0002018;renin-angiotensin regulation of aldosterone production;0.0404393872643031!GO:0048143;astrocyte activation;0.0404393872643031!GO:0046622;positive regulation of organ growth;0.0404393872643031!GO:0031701;angiotensin receptor binding;0.0404393872643031!GO:0031703;type 2 angiotensin receptor binding;0.0404393872643031!GO:0045723;positive regulation of fatty acid biosynthetic process;0.0404393872643031!GO:0001999;renal response to blood flow during renin-angiotensin regulation of systemic arterial blood pressure;0.0404393872643031!GO:0042756;drinking behavior;0.0404393872643031!GO:0002019;angiotensin mediated regulation of renal output;0.0404393872643031!GO:0031702;type 1 angiotensin receptor binding;0.0404393872643031!GO:0001998;angiotensin mediated vasoconstriction involved in regulation of systemic arterial blood pressure;0.0404393872643031!GO:0030203;glycosaminoglycan metabolic process;0.0407369381876234!GO:0008112;nicotinamide N-methyltransferase activity;0.0413751324592954!GO:0045334;clathrin-coated endocytic vesicle;0.0433727858234705!GO:0015248;sterol transporter activity;0.0438142313068381!GO:0030193;regulation of blood coagulation;0.0440513198517107!GO:0006729;tetrahydrobiopterin biosynthetic process;0.0440772638266654!GO:0016860;intramolecular oxidoreductase activity;0.0449781447798403!GO:0005637;nuclear inner membrane;0.0453143616944948!GO:0046487;glyoxylate metabolic process;0.0456225850430445!GO:0003985;acetyl-CoA C-acetyltransferase activity;0.0459717681430244!GO:0006733;oxidoreduction coenzyme metabolic process;0.0465596525139417!GO:0007041;lysosomal transport;0.0465883824630375!GO:0008206;bile acid metabolic process;0.0466754307224685!GO:0050821;protein stabilization;0.0469684482689901!GO:0006642;triacylglycerol mobilization;0.0469684482689901!GO:0003702;RNA polymerase II transcription factor activity;0.0469684482689901!GO:0019835;cytolysis;0.0475999268909399!GO:0015924;mannosyl-oligosaccharide mannosidase activity;0.0477176575622699!GO:0006509;membrane protein ectodomain proteolysis;0.0479337025345843!GO:0033619;membrane protein proteolysis;0.0479337025345843!GO:0004873;asialoglycoprotein receptor activity;0.0479363705212826!GO:0009605;response to external stimulus;0.0479363705212826!GO:0044242;cellular lipid catabolic process;0.0483770321316141!GO:0006383;transcription from RNA polymerase III promoter;0.0485565667442924!GO:0007004;telomere maintenance via telomerase;0.0486921034320346!GO:0005784;translocon complex;0.0487607167714876!GO:0009116;nucleoside metabolic process;0.0488269455060495!GO:0004553;hydrolase activity, hydrolyzing O-glycosyl compounds;0.0488587486184616!GO:0045767;regulation of anti-apoptosis;0.0488587486184616!GO:0042803;protein homodimerization activity;0.0488587486184616!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0488587486184616!GO:0010257;NADH dehydrogenase complex assembly;0.0488587486184616!GO:0033108;mitochondrial respiratory chain complex assembly;0.0488587486184616!GO:0046912;transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer;0.0493099160166184!GO:0003812;alternative-complement-pathway C3/C5 convertase activity;0.0493307731576823!GO:0031529;ruffle organization and biogenesis;0.0493526499629473!GO:0050327;testosterone 17-beta-dehydrogenase activity;0.049910971115534
|sample_id=11603
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=liver
|top_motifs=HNF1A:6.65549531596;HNF4A_NR2F1,2:5.8252131274;FOXA2:4.98107583832;NR6A1:4.43411433712;RXR{A,B,G}_{NR1H2,PPAR}dimers:4.06915884956;STAT2,4,6:3.49887799375;CUX2:2.80770407046;FOX{F1,F2,J1}:2.77450416568;AR:2.55679763246;BPTF:2.37043993093;NKX2-1,4:2.36913389136;ARID5B:2.20015929911;EVI1:1.99054941932;NFE2L1:1.94766619209;MTF1:1.9163991095;FOXQ1:1.78116914507;ALX4:1.73044193195;POU6F1:1.6756523842;CEBPA,B_DDIT3:1.62946010527;NR1H4:1.57160284591;FOXD3:1.55349547374;FOXM1:1.42719327397;TAL1_TCF{3,4,12}:1.38301299308;PPARG:1.3214122391;ADNP_IRX_SIX_ZHX:1.28907404876;GATA6:1.26163595698;MYOD1:1.23682801526;GLI1..3:1.18127140454;DBP:1.13107356936;FOX{D1,D2}:1.12431648238;T:1.04218508986;NFIL3:0.964172117782;RXRA_VDR{dimer}:0.879085319748;IRF7:0.844193707636;SNAI1..3:0.835051057386;LMO2:0.831349438617;HLF:0.791784430382;ZEB1:0.790712820737;FOXP3:0.745310251749;TEF:0.710863102282;TFCP2:0.671884402127;PAX1,9:0.662520809282;ONECUT1,2:0.653959178452;TBP:0.640287419455;NKX3-2:0.606954620972;bHLH_family:0.55749102145;FOX{I1,J2}:0.532387301399;PAX3,7:0.492909830439;NR5A1,2:0.459063704902;HIF1A:0.4362110993;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.422784419439;CRX:0.414536172052;TLX2:0.395671907438;RXR{A,B,G}:0.388074384783;HMGA1,2:0.385020285099;RBPJ:0.371147341839;HOX{A4,D4}:0.344557490183;PAX4:0.296443551795;NFIX:0.288032929524;MAFB:0.286435444336;UFEwm:0.28085317854;ZBTB16:0.280274268046;PAX6:0.261451193819;PDX1:0.130457852331;FOXL1:0.108596530556;IKZF2:0.0982240383436;FOXP1:0.0632286397476;HAND1,2:0.0409322060421;NKX2-2,8:0.0286983026687;MYFfamily:-0.0675971099326;RORA:-0.0711830508907;MTE{core}:-0.0863993777856;EP300:-0.111612710643;ALX1:-0.144937034047;MED-1{core}:-0.169944113954;HES1:-0.172875349282;SMAD1..7,9:-0.176357536458;NHLH1,2:-0.195232368352;SP1:-0.217747570357;CDX1,2,4:-0.22669293263;PBX1:-0.226844388431;HIC1:-0.235199361539;YY1:-0.247795338284;TLX1..3_NFIC{dimer}:-0.247915935134;REST:-0.260325278086;MAZ:-0.273380184125;IRF1,2:-0.300126467055;SPI1:-0.301066168917;VSX1,2:-0.318020665596;NFKB1_REL_RELA:-0.327433695767;STAT1,3:-0.334395045134;TGIF1:-0.364744534321;ATF6:-0.378193712776;SREBF1,2:-0.402813870757;SPIB:-0.425806096436;NFE2:-0.446006143499;ZNF143:-0.446696623329;PAX2:-0.470674327406;ELF1,2,4:-0.498654738134;EN1,2:-0.49884658606;HOX{A5,B5}:-0.522293891042;STAT5{A,B}:-0.546378855108;RUNX1..3:-0.557304863478;ETS1,2:-0.568962054957;ZNF423:-0.574390361244;FOXN1:-0.597473892476;AIRE:-0.599334708501;MEF2{A,B,C,D}:-0.601389325833;DMAP1_NCOR{1,2}_SMARC:-0.602983045857;EBF1:-0.632298767855;HOXA9_MEIS1:-0.635090651589;GTF2A1,2:-0.638738950202;TFAP4:-0.667494156167;GCM1,2:-0.706217846602;SOX{8,9,10}:-0.71056046552;ATF5_CREB3:-0.714489504404;ZFP161:-0.71487313878;TP53:-0.726729419758;PITX1..3:-0.745555708466;TEAD1:-0.750287631556;POU2F1..3:-0.762100230793;GTF2I:-0.768774196924;EGR1..3:-0.783190602749;RREB1:-0.790275066201;LHX3,4:-0.797554392169;FOS_FOS{B,L1}_JUN{B,D}:-0.809207030445;PATZ1:-0.81047696821;TFAP2B:-0.821259576134;BACH2:-0.826868455091;ZNF238:-0.836260237543;OCT4_SOX2{dimer}:-0.850590631607;PRDM1:-0.861142570426;BREu{core}:-0.863486706824;KLF4:-0.875776340762;TOPORS:-0.88553355275;NFE2L2:-0.896751293167;SOX5:-0.92334682833;POU5F1:-0.92894654221;ZNF148:-0.943594342133;POU3F1..4:-0.945861153116;PAX5:-0.957441851565;FOSL2:-0.957889020903;NFY{A,B,C}:-0.980852368787;ESR1:-0.992168219952;TFAP2{A,C}:-0.995177280221;ATF2:-1.00151870904;NFATC1..3:-1.00428612554;MYBL2:-1.00791810141;ESRRA:-1.01240312871;GFI1B:-1.02191251905;GFI1:-1.02629357181;HMX1:-1.04252605078;LEF1_TCF7_TCF7L1,2:-1.05420612686;AHR_ARNT_ARNT2:-1.05673893204;TBX4,5:-1.06116839425;ELK1,4_GABP{A,B1}:-1.09455307427;ZBTB6:-1.14666550357;GZF1:-1.17041838293;NR3C1:-1.17474575855;PRRX1,2:-1.20116986782;SPZ1:-1.21628413378;SRF:-1.21773027025;TFDP1:-1.3086258572;CDC5L:-1.33480686145;E2F1..5:-1.33800357631;IKZF1:-1.35793441118;GATA4:-1.3682301698;POU1F1:-1.38955795321;ATF4:-1.39420279749;RFX1:-1.3957727093;NRF1:-1.39866370415;JUN:-1.4143409126;FOXO1,3,4:-1.42485180086;CREB1:-1.4277968685;SOX17:-1.43732530083;MYB:-1.44333820843;XCPE1{core}:-1.44636086224;HBP1_HMGB_SSRP1_UBTF:-1.54096540199;NKX6-1,2:-1.56615881915;RFX2..5_RFXANK_RFXAP:-1.57394093522;NANOG{mouse}:-1.59001671872;ZIC1..3:-1.60032594321;NKX2-3_NKX2-5:-1.60825442786;MZF1:-1.6990672721;HSF1,2:-1.7610812492;NKX3-1:-1.84837146953;SOX2:-1.8648003746;ZNF384:-1.87171673586;HOX{A6,A7,B6,B7}:-1.94567448692;NANOG:-1.95433601362;XBP1:-2.00779966803;PAX8:-2.53869878951
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11603-120I1;search_select_hide=table117:FF:11603-120I1
}}
}}

Latest revision as of 18:11, 4 June 2020

Name:Hepatocyte, donor2
Species:Human (Homo sapiens)
Library ID:CNhs12349
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueliver
dev stageNA
sexNA
ageNA
cell typehepatocyte
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberSC5205
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005065
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12349 CAGE DRX008308 DRR009180
Accession ID Hg19

Library idBAMCTSS
CNhs12349 DRZ000605 DRZ001990
Accession ID Hg38

Library idBAMCTSS
CNhs12349 DRZ011955 DRZ013340
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005065
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10066.AGTTCC sRNA-Seq DRX037267 DRR041633
Accession ID Hg19

Library idBAMCTSS
SRhi10066.AGTTCC DRZ007275


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.381
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.452
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0.596
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0227
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.719
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.488
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0.596
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0.297
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.603
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.649
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.0202
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.25
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0663
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.517
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0.596
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.897
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.297
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0.993
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.366
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12349

Jaspar motifP-value
MA0002.20.444
MA0003.10.0103
MA0004.10.554
MA0006.10.254
MA0007.10.0627
MA0009.10.786
MA0014.10.307
MA0017.12.96656e-15
MA0018.21.63658e-4
MA0019.10.945
MA0024.10.013
MA0025.10.564
MA0027.10.968
MA0028.10.0934
MA0029.10.363
MA0030.10.216
MA0031.10.102
MA0035.20.0239
MA0038.10.107
MA0039.20.629
MA0040.10.374
MA0041.10.336
MA0042.10.676
MA0043.10.0144
MA0046.11.23756e-61
MA0047.23.19839e-5
MA0048.10.817
MA0050.10.875
MA0051.10.824
MA0052.10.52
MA0055.10.788
MA0057.10.171
MA0058.10.453
MA0059.10.0628
MA0060.12.18495e-5
MA0061.10.876
MA0062.20.0014
MA0065.23.12633e-9
MA0066.10.0283
MA0067.10.0131
MA0068.10.0399
MA0069.10.296
MA0070.10.382
MA0071.10.0512
MA0072.10.0838
MA0073.10.646
MA0074.10.261
MA0076.10.0214
MA0077.10.431
MA0078.10.804
MA0079.20.413
MA0080.22.89897e-4
MA0081.10.122
MA0083.10.0788
MA0084.10.608
MA0087.10.69
MA0088.10.371
MA0090.10.764
MA0091.10.882
MA0092.10.407
MA0093.10.548
MA0099.24.5346e-6
MA0100.10.374
MA0101.10.217
MA0102.20.745
MA0103.10.0043
MA0104.20.448
MA0105.10.154
MA0106.10.297
MA0107.10.203
MA0108.20.276
MA0111.10.745
MA0112.24.53556e-7
MA0113.10.219
MA0114.12.64876e-13
MA0115.13.05902e-7
MA0116.14.88315e-4
MA0117.10.645
MA0119.10.0473
MA0122.10.722
MA0124.10.853
MA0125.10.855
MA0131.10.306
MA0135.10.855
MA0136.11.65999e-5
MA0137.20.00711
MA0138.20.0317
MA0139.10.144
MA0140.10.0866
MA0141.14.92118e-5
MA0142.10.00717
MA0143.10.103
MA0144.10.00749
MA0145.10.306
MA0146.10.0583
MA0147.10.351
MA0148.16.53285e-4
MA0149.10.197
MA0150.10.691
MA0152.14.31821e-5
MA0153.11.63567e-42
MA0154.10.0159
MA0155.10.343
MA0156.10.0149
MA0157.10.0529
MA0159.14.5834e-4
MA0160.10.0122
MA0162.10.357
MA0163.14.41973e-4
MA0164.10.666
MA0258.15.04605e-4
MA0259.10.79



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12349

Novel motifP-value
10.0426
100.204
1000.228
1010.998
1020.265
1030.147
1040.77
1050.377
1060.00558
1070.0172
1080.392
1090.185
110.167
1100.237
1110.179
1120.0119
1130.229
1140.023
1150.726
1160.237
1170.36
1180.375
1190.0182
120.503
1200.96
1210.159
1220.527
1230.764
1240.0444
1250.298
1260.218
1270.72
1280.0493
1290.202
130.106
1300.0686
1310.857
1320.447
1330.688
1340.737
1350.393
1360.748
1370.765
1380.201
1390.316
140.8
1400.221
1410.0697
1420.202
1430.359
1440.749
1450.129
1460.161
1470.655
1480.0244
1490.0612
150.0987
1500.479
1510.204
1520.258
1530.818
1540.537
1550.0602
1560.942
1570.892
1580.883
1590.43
160.256
1600.208
1610.627
1620.41
1630.72
1640.244
1650.0301
1660.808
1670.111
1680.742
1694.91825e-4
170.232
180.243
190.0732
20.529
200.998
210.627
220.132
230.109
240.873
250.948
260.0285
270.42
280.866
290.42
30.219
300.948
310.352
320.399
330.346
340.568
350.0824
360.0536
370.216
380.277
390.329
40.301
400.0712
410.34
420.541
430.123
441.71914e-5
450.474
460.0997
470.332
480.262
490.123
50.225
500.458
510.618
520.105
530.963
540.377
550.706
560.621
570.486
580.339
590.0898
60.789
600.0368
610.412
620.177
630.111
640.432
650.0964
660.463
670.237
680.644
690.533
70.113
700.0767
710.0665
720.595
730.164
740.819
750.133
760.943
770.0536
780.0707
790.336
80.0478
800.673
810.256
820.166
830.608
840.301
850.0203
860.272
870.924
880.509
890.0869
90.964
900.0628
910.184
920.103
930.417
940.841
950.616
960.189
970.57
980.403
990.0548



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12349


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000181 (metabolising cell)
0000417 (endopolyploid cell)
0000668 (parenchymal cell)
0000412 (polyploid cell)
0000255 (eukaryotic cell)
0000182 (hepatocyte)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002107 (liver)
0002100 (trunk)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0005177 (trunk region element)
0002365 (exocrine gland)
0005172 (abdomen element)
0006925 (digestive gland)
0002530 (gland)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0002330 (exocrine system)
0000916 (abdomen)
0002423 (hepatobiliary system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000078 (human hepatocyte sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000223 (endodermal cell)

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