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(Created page with "{{f5samples |id=FF:11751-123G5 |name=mesenchymal precursor cell - bone marrow, donor2 |sample_id=11751 |rna_tube_id=123G5 |rna_box=123 |rna_position=G5 |sample_cell_lot...")
 
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{{f5samples
{{f5samples
|id=FF:11751-123G5
|DRA_sample_Accession=CAGE@SAMD00005728
|name=mesenchymal precursor cell - bone marrow, donor2
|accession_numbers=CAGE;DRX008549;DRR009421;DRZ000846;DRZ002231;DRZ012196;DRZ013581
|sample_id=11751
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002371,UBERON:0001474,UBERON:0002384,UBERON:0000479,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0004765,UBERON:0010317,UBERON:0002204,UBERON:0001434,UBERON:0002390,UBERON:0002193,UBERON:0002405
|rna_tube_id=123G5
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034,CL:0002092,CL:0002540
|rna_box=123
|rna_position=G5
|sample_cell_lot=BM-37
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=bone marrow
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=2.14000
|rna_od260/280=2.05000
|sample_cell_type=mesenchymal precursor cell
|sample_cell_line=
|sample_collaboration=Claudio Schneider LNCIB
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=
|rna_extraction_protocol=
|rna_weight_ug=40.28700
|rna_concentration=0.53716
|sample_note=
|profile_hcage=CNhs12367,LSID914,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002092,CL:0002320,CL:0002371,CL:0002540
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000269
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr1:170632285..170632309,+!p1@PRRX1!1.54!37.99!PRRX1;;chr2:45236540..45236577,-!p1@SIX2!1.45!26.92!SIX2;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.45!26.92!HOXC5;;chr12:54378923..54378966,+!p1@HOXC10!1.35!21.13!HOXC10;;chr6:45296048..45296082,+!p1@RUNX2!1.33!23.40!RUNX2;;chr4:174451370..174451387,-!p1@HAND2!1.31!19.62!HAND2;;chr10:131762504..131762555,-!p1@EBF3!1.31!19.37!EBF3;;chr7:19157248..19157268,-!p1@TWIST1!1.27!48.05!TWIST1;;chr1:170633348..170633399,+!p2@PRRX1!1.22!21.38!PRRX1;;chr8:22550982..22550999,-!p1@EGR3!1.19!41.01!EGR3;;chr1:170633262..170633285,+!p3@PRRX1!1.18!16.10!PRRX1;;chr7:44143925..44143970,+!p1@AEBP1!1.15!291.06!AEBP1;;chr15:42749722..42749739,-!p2@ZFP106!1.14!23.14!ZFP106;;chr5:158526917..158526932,-!p1@EBF1!1.13!30.94!EBF1;;chr6:85474299..85474324,-!p1@TBX18!1.12!21.63!TBX18;;chr8:25902876..25902936,-!p1@EBF2!1.12!12.33!EBF2;;chr12:54380036..54380091,+!p4@HOXC10!1.12!12.08!HOXC10;;chr7:44143978..44143989,+!p2@AEBP1!1.11!21.63!AEBP1;;chr6:1610293..1610310,+!p1@FOXC1!1.11!19.87!FOXC1;;chr2:19558373..19558392,-!p1@OSR1!1.10!31.95!OSR1;;chr4:174450089..174450153,-!p2@HAND2!1.10!11.57!HAND2;;chr20:50179368..50179392,-!p2@NFATC2!1.09!14.84!NFATC2;;chr19:45971246..45971265,+!p1@FOSB!1.08!203.77!FOSB;;chr1:170632959..170632987,+!p4@PRRX1!1.07!11.82!PRRX1;;chr14:24837368..24837401,+!p1@NFATC4!1.06!24.65!NFATC4;;chr19:13134772..13134822,+!p2@NFIX!1.05!15.09!NFIX;;chr21:36260773..36260804,-!p7@RUNX1!1.05!13.84!RUNX1;;chr7:44143997..44144008,+!p3@AEBP1!1.05!13.08!AEBP1;;chr16:54320617..54320643,-!p3@IRX3!1.05!13.08!IRX3;;chrY:21906594..21906622,-!p1@KDM5D!1.04!10.06!KDM5D;;chr1:170632477..170632506,+!p6@PRRX1!1.01!9.31!PRRX1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.01!9.31!HOXC5;;chr3:21792682..21792720,-!p1@ZNF385D!1.01!9.31!ZNF385D;;chr1:44513995..44514031,+!p1@KLF17!1.00!9.06!KLF17;;chr11:46299199..46299233,+!p1@CREB3L1!0.99!46.79!CREB3L1;;chr1:158979872..158979898,+!p3@IFI16!0.98!27.17!IFI16;;chr12:66218255..66218304,+!p3@HMGA2!0.98!23.40!HMGA2;;chr16:54320646..54320672,-!p2@IRX3!0.98!13.33!IRX3;;chr12:66218598..66218645,+!p2@HMGA2!0.97!39.75!HMGA2;;chr1:170632250..170632277,+!p7@PRRX1!0.94!7.80!PRRX1;;chr16:79634624..79634642,-!p1@MAF!0.92!29.69!MAF;;chr2:45236579..45236596,-!p2@SIX2!0.92!7.30!SIX2;;chr7:15726296..15726315,-!p1@MEOX2!0.92!7.30!MEOX2;;chr7:19157043..19157088,-!p2@TWIST1!0.90!18.11!TWIST1;;chr6:1312325..1312340,+!p1@FOXQ1!0.90!11.57!FOXQ1;;chr7:27224842..27224872,-!p1@HOXA11!0.89!6.79!HOXA11;;chr12:54380404..54380433,+!p3@HOXC10!0.88!6.54!HOXC10;;chr9:132427972..132428056,+!p1@PRRX2!0.86!8.30!PRRX2;;chr7:27213893..27213954,-!p1@HOXA10!0.86!6.29!HOXA10;;chr16:54320675..54320715,-!p1@IRX3!0.85!13.84!IRX3;;chr10:64576105..64576133,-!p1@EGR2!0.85!13.08!EGR2;;chr20:51588873..51588953,+!p1@TSHZ2!0.84!8.05!TSHZ2;;chr1:203055129..203055147,-!p1@MYOG!0.83!5.79!MYOG;;chr16:54320322..54320343,-!p7@IRX3!0.83!5.79!IRX3;;chr14:61116183..61116208,-!p1@SIX1!0.81!22.14!SIX1;;chr6:126240442..126240459,+!p4@NCOA7!0.81!7.04!NCOA7;;chr14:62162258..62162269,+!p2@HIF1A!0.80!55.85!HIF1A;;chr14:62162285..62162296,+!p3@HIF1A!0.80!29.94!HIF1A;;chr5:137804484..137804498,+!p2@EGR1!0.80!23.14!EGR1;;chr11:46299539..46299620,+!p2@CREB3L1!0.80!9.31!CREB3L1;;chr12:54410948..54410992,+!p3@HOXC5!0.80!5.28!HOXC5;;chr7:27205106..27205134,-!p2@HOXA9!0.80!5.28!HOXA9;;chr1:158979792..158979814,+!p2@IFI16!0.78!52.58!IFI16;;chr16:54964740..54964789,+!p1@IRX5!0.78!7.55!IRX5;;chr7:96654133..96654150,-!p1@DLX5!0.78!5.03!DLX5;;chr12:54393880..54393962,+!p1@HOXC9!0.78!5.03!HOXC9;;chr3:189349162..189349207,+!p2@TP63!0.78!5.03!TP63;;chr16:54320101..54320125,-!p4@IRX3!0.77!7.30!IRX3;;chr1:158969752..158969780,+!p6@IFI16!0.76!8.80!IFI16;;chr3:157824001..157824078,-!p2@SHOX2!0.76!4.78!SHOX2;;chr7:27224795..27224840,-!p2@HOXA11!0.76!4.78!HOXA11;;chr12:54379029..54379057,+!p2@HOXC10!0.76!4.78!HOXC10;;chr11:65686732..65686756,+!p2@DRAP1!0.74!21.13!DRAP1;;chr7:96654026..96654061,-!p2@DLX5!0.74!4.53!DLX5;;chr7:15726243..15726293,-!p2@MEOX2!0.72!4.28!MEOX2;;chr8:77593750..77593757,+!p3@ZFHX4!0.72!4.28!ZFHX4;;chr14:75745523..75745537,+!p1@FOS!0.71!569.05!FOS;;chr10:63809106..63809127,+!p1@ARID5B!0.71!62.89!ARID5B;;chr9:16870710..16870763,-!p1@BNC2!0.71!7.55!BNC2;;chr9:132427883..132427951,+!p2@PRRX2!0.70!4.03!PRRX2;;chr16:54319010..54319041,-!p8@IRX3!0.70!4.03!IRX3;;chr7:14029283..14029311,-!p1@ETV1!0.69!23.65!ETV1;;chr3:114343768..114343822,-!p1@ZBTB20!0.69!19.37!ZBTB20;;chr21:36421535..36421610,-!p2@RUNX1!0.69!15.60!RUNX1;;chr2:145277882..145277967,-!p3@ZEB2!0.69!7.30!ZEB2;;chr1:158985493..158985535,+!p4@IFI16!0.69!6.29!IFI16;;chr12:66218212..66218244,+!p5@HMGA2!0.68!5.79!HMGA2;;chr9:16870659..16870675,-!p2@BNC2!0.68!4.78!BNC2;;chr9:77112244..77112262,+!p1@RORB!0.68!4.28!RORB;;chrY:2803415..2803468,+!p1@ZFY!0.68!3.77!ZFY;;chr1:170632723..170632739,+!p8@PRRX1!0.68!3.77!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!0.68!3.77!PRRX1;;chr7:27205136..27205164,-!p1@HOXA9!0.68!3.77!HOXA9;;chr14:95236440..95236465,-!p1@GSC!0.68!3.77!GSC;;chr3:157823517..157823562,-!p1@SHOX2!0.67!4.03!SHOX2;;chr3:21792585..21792625,-!p2@ZNF385D!0.66!4.03!ZNF385D;;chr3:141087454..141087465,+!p19@ZBTB38!0.66!3.52!ZBTB38;;chr6:1612300..1612324,+!p3@FOXC1!0.66!3.52!FOXC1;;chr7:27192185..27192209,-!p1@HOXA3!0.66!3.52!HOXA3;;chr12:54380112..54380126,+!p5@HOXC10!0.66!3.52!HOXC10;;chr1:59249688..59249703,-!p3@JUN!0.65!24.15!JUN;;chr8:99956662..99956684,+!p1@OSR2!0.65!5.79!OSR2;;chr18:22932080..22932170,-!p1@ZNF521!0.64!16.60!ZNF521;;chr16:79633894..79633954,-!p3@MAF!0.64!7.04!MAF;;chr2:200322654..200322707,-!p2@SATB2!0.64!5.28!SATB2;;chr6:85473156..85473210,-!p2@TBX18!0.64!4.28!TBX18;;chr5:158527139..158527161,-!p5@EBF1!0.63!3.27!EBF1;;chr3:21792631..21792665,-!p3@ZNF385D!0.63!3.27!ZNF385D;;chr12:54402745..54402788,+!p1@HOXC8!0.63!3.27!HOXC8;;chr19:13135386..13135435,+!p4@NFIX!0.63!3.27!NFIX;;chr8:49833978..49833996,-!p1@SNAI2!0.62!77.99!SNAI2;;chr11:65687158..65687216,+!p4@DRAP1!0.62!21.13!DRAP1;;chr11:65686802..65686818,+!p6@DRAP1!0.62!6.04!DRAP1;;chr6:1612248..1612281,+!p2@FOXC1!0.62!3.52!FOXC1;;chr2:208394817..208394834,+!p3@CREB1!0.61!14.34!CREB1;;chr7:113726357..113726443,+!p1@FOXP2!0.61!5.79!FOXP2;;chr5:158526459..158526481,-!p2@EBF1!0.61!4.28!EBF1;;chr6:126240463..126240489,+!p6@NCOA7!0.61!3.52!NCOA7;;chr20:39317868..39317884,-!p1@MAFB!0.60!42.77!MAFB;;chr9:4300050..4300118,-!p1@GLIS3!0.60!23.14!GLIS3;;chr14:62213827..62213853,+!p6@HIF1A!0.60!4.53!HIF1A;;chr11:46299443..46299459,+!p4@CREB3L1!0.60!3.02!CREB3L1;;chr12:54394309..54394336,+!p2@HOXC9!0.60!3.02!HOXC9;;chr1:170632137..170632172,+!p10@PRRX1!0.60!3.02!PRRX1;;chr1:170632310..170632321,+!p15@PRRX1!0.60!3.02!PRRX1;;chr4:174451350..174451363,-!p3@HAND2!0.60!3.02!HAND2;;chr16:54320280..54320291,-!p9@IRX3!0.60!3.02!IRX3;;chr8:93074803..93074845,-!p1@RUNX1T1!0.60!3.02!RUNX1T1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.60!3.02!RUNX1T1;;chr5:72744594..72744609,-!p1@FOXD1!0.59!15.60!FOXD1;;chr2:239756671..239756732,+!p1@TWIST2!0.58!10.57!TWIST2;;chr7:27195867..27195893,-!p3@HOXA7!0.58!2.77!HOXA7;;chr7:27196267..27196311,-!p1@HOXA7!0.58!2.77!HOXA7;;chr10:119303078..119303169,+!p2@EMX2!0.58!2.77!EMX2;;chr1:170632439..170632465,+!p11@PRRX1!0.58!2.77!PRRX1;;chr1:170632647..170632659,+!p17@PRRX1!0.58!2.77!PRRX1;;chr16:54320302..54320317,-!p10@IRX3!0.58!2.77!IRX3;;chr5:137801160..137801176,+!p1@EGR1!0.56!331.82!EGR1;;chr8:49833948..49833973,-!p2@SNAI2!0.56!20.63!SNAI2;;chr10:63809134..63809145,+!p6@ARID5B!0.56!7.04!ARID5B;;chr12:66218183..66218209,+!p4@HMGA2!0.56!5.79!HMGA2;;chr3:178789522..178789564,-!p2@ZMAT3!0.55!23.40!ZMAT3;;chr12:53614115..53614154,-!p1@RARG!0.55!16.60!RARG;;chr11:65687362..65687436,+!p3@DRAP1!0.55!14.34!DRAP1;;chr8:77593474..77593612,+!p1@ZFHX4!0.55!13.08!ZFHX4;;chr19:44037546..44037594,+!p1@ZNF575!0.55!6.04!ZNF575;;chr16:79634595..79634620,-!p2@MAF!0.55!5.28!MAF;;chr19:42788636..42788660,+!p1@CIC!0.55!4.78!CIC;;chr5:72744445..72744466,-!p2@FOXD1!0.55!4.78!FOXD1;;chr16:54320158..54320200,-!p5@IRX3!0.55!4.03!IRX3;;chr4:26322673..26322684,+!p11@RBPJ!0.55!2.52!RBPJ;;chrY:21906761..21906810,-!p2@KDM5D!0.55!2.52!KDM5D;;chr2:27357446..27357475,-!p2@PREB!0.54!10.31!PREB;;chr4:26322267..26322334,+!p3@RBPJ!0.54!7.04!RBPJ;;chr13:41635029..41635044,-!p4@ELF1!0.54!6.04!ELF1;;chr14:62203595..62203676,+!p4@HIF1A!0.54!5.28!HIF1A;;chr7:14028488..14028516,-!p2@ETV1!0.54!2.77!ETV1;;chr14:62162224..62162254,+!p1@HIF1A!0.53!450.31!HIF1A;;chr8:116681409..116681431,-!p2@TRPS1!0.53!7.80!TRPS1;;chr5:134369905..134369972,-!p1@PITX1!0.53!4.03!PITX1;;chr12:56753869..56753930,-!p1@STAT2!0.52!132.32!STAT2;;chr12:96588143..96588185,+!p1@ELK3!0.52!36.23!ELK3;;chr7:17338266..17338282,+!p1@AHR!0.52!32.20!AHR;;chr5:321810..321877,+!p1@AHRR!0.52!9.06!AHRR;;chr3:12329397..12329433,+!p2@PPARG!0.52!6.29!PPARG;;chr12:66218573..66218596,+!p7@HMGA2!0.52!3.77!HMGA2;;chr7:28448995..28449011,+!p4@CREB5!0.52!3.52!CREB5;;chr16:4365715..4365746,+!p@chr16:4365715..4365746,+!0.52!3.27!GLIS2;;chr8:72756637..72756664,-!p3@MSC!0.52!2.77!MSC;;chr2:145277640..145277771,-!p1@ZEB2!0.51!39.50!ZEB2;;chr10:63809013..63809041,+!p3@ARID5B!0.51!15.85!ARID5B;;chr17:59477233..59477263,+!p1@TBX2!0.51!8.55!TBX2;;chr13:74708029..74708077,-!p2@KLF12!0.51!7.80!KLF12;;chr1:200379104..200379128,-!p2@ZNF281!0.51!6.54!ZNF281;;chr16:31076332..31076388,-!p3@ZNF668!0.51!2.26!ZNF668;;chr2:102091566..102091581,-!p1@RFX8!0.51!2.26!RFX8;;chr2:176994408..176994492,+!p1@HOXD8!0.51!2.26!HOXD8;;chr2:19558327..19558334,-!p2@OSR1!0.51!2.26!OSR1;;chr3:141121871..141121885,+!p13@ZBTB38!0.51!2.26!ZBTB38;;chr3:21792790..21792824,-!p4@ZNF385D!0.51!2.26!ZNF385D;;chr7:15725757..15725828,-!p5@MEOX2!0.51!2.26!MEOX2;;chr7:27196217..27196246,-!p2@HOXA7!0.51!2.26!HOXA7;;chr8:116673894..116673913,-!p12@TRPS1!0.51!2.26!TRPS1;;chr12:66218904..66218913,+!p11@HMGA2!0.51!2.26!HMGA2;;chr14:62214151..62214164,+!p11@HIF1A!0.51!2.26!HIF1A;;chr9:16705069..16705086,-!p3@BNC2!0.51!2.26!BNC2;;chr2:191878874..191878938,-!p1@STAT1!0.50!157.23!STAT1;;ch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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002092;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002540;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor2.CNhs12367.11751-123G5.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor2.CNhs12367.11751-123G5.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor2.CNhs12367.11751-123G5.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor2.CNhs12367.11751-123G5.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520bone%2520marrow%252c%2520donor2.CNhs12367.11751-123G5.hg38.nobarcode.ctss.bed.gz
|id=FF:11751-123G5
|is_a=EFO:0002091;;FF:0000269
|is_obsolete=
|library_id=CNhs12367
|library_id_phase_based=2:CNhs12367
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11751
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11751
|name=mesenchymal precursor cell - bone marrow, donor2
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs12367,LSID914,release011,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=123
|rna_catalog_number=
|rna_concentration=0.53716
|rna_extraction_protocol=
|rna_lot_number=
|rna_od260/230=2.14
|rna_od260/280=2.05
|rna_position=G5
|rna_rin=
|rna_sample_type=
|rna_tube_id=123G5
|rna_weight_ug=40.287
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=BM-37
|sample_cell_type=mesenchymal precursor cell
|sample_collaboration=Claudio Schneider LNCIB
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.24648763160291e-207!GO:0005737;cytoplasm;1.98090013455187e-195!GO:0043226;organelle;8.31142782639905e-160!GO:0043229;intracellular organelle;1.50712605410136e-159!GO:0043231;intracellular membrane-bound organelle;1.61935656291478e-154!GO:0043227;membrane-bound organelle;3.25562425267133e-154!GO:0044444;cytoplasmic part;9.14451602801408e-154!GO:0044422;organelle part;2.37897277302285e-119!GO:0044446;intracellular organelle part;5.89175810017651e-118!GO:0032991;macromolecular complex;3.10493066436365e-83!GO:0030529;ribonucleoprotein complex;2.80166170757073e-75!GO:0005515;protein binding;1.47242961687757e-72!GO:0044238;primary metabolic process;3.83759209444382e-70!GO:0044237;cellular metabolic process;1.58605064682842e-69!GO:0005739;mitochondrion;9.35873196557578e-64!GO:0043170;macromolecule metabolic process;1.73446808451079e-62!GO:0043233;organelle lumen;1.78189963488115e-60!GO:0031974;membrane-enclosed lumen;1.78189963488115e-60!GO:0003723;RNA binding;3.49346438649993e-57!GO:0044428;nuclear part;1.46491545473625e-53!GO:0031090;organelle membrane;7.52895135917377e-53!GO:0005840;ribosome;1.08997515221177e-48!GO:0019538;protein metabolic process;1.15047146559838e-46!GO:0006412;translation;4.67266411142272e-44!GO:0015031;protein transport;7.73156279571322e-44!GO:0003735;structural constituent of ribosome;1.71328126823537e-43!GO:0005634;nucleus;2.12581937267559e-43!GO:0033036;macromolecule localization;3.08714689485638e-43!GO:0044429;mitochondrial part;2.96665687244912e-42!GO:0016043;cellular component organization and biogenesis;8.68430384536228e-42!GO:0045184;establishment of protein localization;1.42708786516933e-41!GO:0044260;cellular macromolecule metabolic process;1.98606462693285e-41!GO:0043234;protein complex;2.31816440213689e-41!GO:0008104;protein localization;6.14637807559398e-41!GO:0005829;cytosol;6.53218165613314e-41!GO:0009058;biosynthetic process;1.14439960183587e-40!GO:0044267;cellular protein metabolic process;3.97236002313166e-40!GO:0033279;ribosomal subunit;9.85447909712109e-39!GO:0009059;macromolecule biosynthetic process;1.86212693609345e-37!GO:0006396;RNA processing;2.3160208277455e-37!GO:0031967;organelle envelope;3.19650677533503e-35!GO:0031975;envelope;7.50498261184555e-35!GO:0044249;cellular biosynthetic process;1.16289083549681e-34!GO:0031981;nuclear lumen;1.29283595027799e-32!GO:0046907;intracellular transport;2.16315677103891e-32!GO:0016071;mRNA metabolic process;1.53460002616109e-30!GO:0008380;RNA splicing;9.96519285111303e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.2902203682388e-28!GO:0010467;gene expression;1.63527346387469e-28!GO:0005740;mitochondrial envelope;6.46337800863965e-28!GO:0006886;intracellular protein transport;1.00492592791352e-27!GO:0043283;biopolymer metabolic process;1.3855795638685e-27!GO:0006397;mRNA processing;1.84555305672411e-26!GO:0005783;endoplasmic reticulum;2.07368007946663e-26!GO:0031966;mitochondrial membrane;3.87098113270066e-26!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.76025695389907e-25!GO:0019866;organelle inner membrane;2.55264381374739e-24!GO:0065003;macromolecular complex assembly;3.09151765669965e-24!GO:0005743;mitochondrial inner membrane;4.25585173552958e-23!GO:0006119;oxidative phosphorylation;1.08174522150605e-22!GO:0044445;cytosolic part;1.08174522150605e-22!GO:0022607;cellular component assembly;2.74893157374743e-22!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.12478228743071e-22!GO:0043228;non-membrane-bound organelle;1.16829939683277e-21!GO:0043232;intracellular non-membrane-bound organelle;1.16829939683277e-21!GO:0006457;protein folding;1.68410599461645e-21!GO:0012505;endomembrane system;2.39882695873233e-21!GO:0044432;endoplasmic reticulum part;7.71776932730947e-21!GO:0051641;cellular localization;1.53120088901003e-20!GO:0051649;establishment of cellular localization;2.0100337078832e-20!GO:0015935;small ribosomal subunit;2.38395417010946e-20!GO:0006996;organelle organization and biogenesis;3.07394785804733e-20!GO:0005681;spliceosome;1.23968086410609e-19!GO:0005654;nucleoplasm;1.51699687066401e-19!GO:0015934;large ribosomal subunit;2.0390758379091e-19!GO:0048770;pigment granule;2.13742356411477e-19!GO:0042470;melanosome;2.13742356411477e-19!GO:0044455;mitochondrial membrane part;5.13626232864335e-19!GO:0005794;Golgi apparatus;1.36818087913457e-18!GO:0051186;cofactor metabolic process;2.17258986880335e-17!GO:0031980;mitochondrial lumen;3.39927506184712e-17!GO:0005759;mitochondrial matrix;3.39927506184712e-17!GO:0005746;mitochondrial respiratory chain;6.38177108129783e-17!GO:0022618;protein-RNA complex assembly;8.74970838308635e-17!GO:0000502;proteasome complex (sensu Eukaryota);2.15838975115183e-16!GO:0016462;pyrophosphatase activity;2.41835347717474e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.5791461476917e-16!GO:0044451;nucleoplasm part;3.59134671354642e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;3.60795419020657e-16!GO:0044265;cellular macromolecule catabolic process;5.56747813623367e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.93891654332199e-16!GO:0008134;transcription factor binding;1.08230204811164e-15!GO:0017111;nucleoside-triphosphatase activity;1.7209305145937e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.45841643693213e-15!GO:0043285;biopolymer catabolic process;8.63901554738446e-15!GO:0048193;Golgi vesicle transport;9.28861739775493e-15!GO:0016874;ligase activity;9.85490479285938e-15!GO:0009057;macromolecule catabolic process;1.01332467602322e-14!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.10850996386685e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.15371631766202e-14!GO:0003954;NADH dehydrogenase activity;1.15371631766202e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.15371631766202e-14!GO:0006512;ubiquitin cycle;1.40950905436218e-14!GO:0000166;nucleotide binding;1.54399445062871e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;2.28936686573518e-14!GO:0044248;cellular catabolic process;2.30325537935345e-14!GO:0005789;endoplasmic reticulum membrane;2.98829582293318e-14!GO:0008135;translation factor activity, nucleic acid binding;3.75462561639803e-14!GO:0019941;modification-dependent protein catabolic process;4.80132608423705e-14!GO:0043632;modification-dependent macromolecule catabolic process;4.80132608423705e-14!GO:0006605;protein targeting;5.00005126684042e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.12356528626689e-14!GO:0044257;cellular protein catabolic process;6.12374172018074e-14!GO:0006511;ubiquitin-dependent protein catabolic process;6.65589188792093e-14!GO:0051082;unfolded protein binding;8.09926543010937e-14!GO:0005730;nucleolus;8.65193554499552e-14!GO:0016192;vesicle-mediated transport;1.78297258322312e-13!GO:0005761;mitochondrial ribosome;1.90297374011265e-13!GO:0000313;organellar ribosome;1.90297374011265e-13!GO:0030163;protein catabolic process;2.16858360446518e-13!GO:0006732;coenzyme metabolic process;2.23005830532207e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.42936502485877e-13!GO:0005793;ER-Golgi intermediate compartment;2.55475162740326e-13!GO:0042775;organelle ATP synthesis coupled electron transport;4.10877773906455e-13!GO:0042773;ATP synthesis coupled electron transport;4.10877773906455e-13!GO:0030964;NADH dehydrogenase complex (quinone);5.46115329561505e-13!GO:0045271;respiratory chain complex I;5.46115329561505e-13!GO:0005747;mitochondrial respiratory chain complex I;5.46115329561505e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.80762181831357e-12!GO:0009055;electron carrier activity;1.52523635370503e-11!GO:0003676;nucleic acid binding;1.61478735705104e-11!GO:0006259;DNA metabolic process;1.71073957926697e-11!GO:0003743;translation initiation factor activity;2.19606753031657e-11!GO:0006413;translational initiation;5.76009366605524e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;8.58581343454818e-11!GO:0000375;RNA splicing, via transesterification reactions;8.58581343454818e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.58581343454818e-11!GO:0043412;biopolymer modification;1.46681246588103e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.99978995030668e-10!GO:0006163;purine nucleotide metabolic process;2.32064376732435e-10!GO:0009259;ribonucleotide metabolic process;2.8043889108974e-10!GO:0009150;purine ribonucleotide metabolic process;2.81283434591003e-10!GO:0005768;endosome;3.11358531721754e-10!GO:0017076;purine nucleotide binding;3.20072730917007e-10!GO:0016491;oxidoreductase activity;3.44653033316987e-10!GO:0016070;RNA metabolic process;6.91435954139807e-10!GO:0012501;programmed cell death;7.59458526159457e-10!GO:0009199;ribonucleoside triphosphate metabolic process;1.15129150542588e-09!GO:0003712;transcription cofactor activity;1.19593423423486e-09!GO:0032553;ribonucleotide binding;1.22749130385911e-09!GO:0032555;purine ribonucleotide binding;1.22749130385911e-09!GO:0009141;nucleoside triphosphate metabolic process;1.24229110320038e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.3529614336896e-09!GO:0009144;purine nucleoside triphosphate metabolic process;1.3529614336896e-09!GO:0006915;apoptosis;1.3597075156462e-09!GO:0006446;regulation of translational initiation;1.82342940527477e-09!GO:0006464;protein modification process;2.03348087380069e-09!GO:0042254;ribosome biogenesis and assembly;2.20751642882286e-09!GO:0009056;catabolic process;2.36598763922374e-09!GO:0006164;purine nucleotide biosynthetic process;2.52362217168043e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.61604139150198e-09!GO:0005788;endoplasmic reticulum lumen;3.00489899631758e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.00489899631758e-09!GO:0045333;cellular respiration;3.8354145696125e-09!GO:0005773;vacuole;3.97939120509998e-09!GO:0007049;cell cycle;3.99850663768568e-09!GO:0009060;aerobic respiration;6.58849412017452e-09!GO:0015986;ATP synthesis coupled proton transport;6.76140873093715e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.76140873093715e-09!GO:0008219;cell death;7.2625720754743e-09!GO:0016265;death;7.2625720754743e-09!GO:0016604;nuclear body;7.80509897246154e-09!GO:0009260;ribonucleotide biosynthetic process;8.31619472091459e-09!GO:0046034;ATP metabolic process;9.26724303828856e-09!GO:0008639;small protein conjugating enzyme activity;1.37145836625219e-08!GO:0005635;nuclear envelope;1.39883829034708e-08!GO:0009142;nucleoside triphosphate biosynthetic process;1.55762373339176e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.55762373339176e-08!GO:0048523;negative regulation of cellular process;1.61689628960501e-08!GO:0008565;protein transporter activity;1.6913557062448e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.83348359185077e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.83348359185077e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.95146913590078e-08!GO:0031965;nuclear membrane;1.99693637165332e-08!GO:0051188;cofactor biosynthetic process;2.06652124742374e-08!GO:0019787;small conjugating protein ligase activity;2.14018237583358e-08!GO:0004842;ubiquitin-protein ligase activity;2.45845764861367e-08!GO:0019829;cation-transporting ATPase activity;2.62058280052286e-08!GO:0003924;GTPase activity;3.11847743630988e-08!GO:0044431;Golgi apparatus part;3.56894830004983e-08!GO:0006461;protein complex assembly;3.90917118277451e-08!GO:0044440;endosomal part;4.01467295682022e-08!GO:0010008;endosome membrane;4.01467295682022e-08!GO:0000323;lytic vacuole;4.56995139989819e-08!GO:0005764;lysosome;4.56995139989819e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.84981538021848e-08!GO:0006091;generation of precursor metabolites and energy;4.88041314395229e-08!GO:0006913;nucleocytoplasmic transport;8.18880529561078e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.2084919272348e-08!GO:0016881;acid-amino acid ligase activity;1.04239407865987e-07!GO:0030120;vesicle coat;1.0430877634835e-07!GO:0030662;coated vesicle membrane;1.0430877634835e-07!GO:0006754;ATP biosynthetic process;1.12148545782076e-07!GO:0006753;nucleoside phosphate metabolic process;1.12148545782076e-07!GO:0005770;late endosome;1.13925906338633e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.16809632304371e-07!GO:0006974;response to DNA damage stimulus;1.17833379680703e-07!GO:0051169;nuclear transport;1.57526678696202e-07!GO:0006099;tricarboxylic acid cycle;2.14510958210816e-07!GO:0046356;acetyl-CoA catabolic process;2.14510958210816e-07!GO:0016607;nuclear speck;2.48024234995871e-07!GO:0008361;regulation of cell size;2.58967619600824e-07!GO:0016049;cell growth;3.12763013810233e-07!GO:0042623;ATPase activity, coupled;3.1537643910768e-07!GO:0017038;protein import;3.1537643910768e-07!GO:0016469;proton-transporting two-sector ATPase complex;3.23078489707608e-07!GO:0048475;coated membrane;3.23078489707608e-07!GO:0030117;membrane coat;3.23078489707608e-07!GO:0016887;ATPase activity;3.27869964342065e-07!GO:0006399;tRNA metabolic process;3.39317175123356e-07!GO:0005839;proteasome core complex (sensu Eukaryota);3.72058168575603e-07!GO:0048519;negative regulation of biological process;4.36132635357633e-07!GO:0030554;adenyl nucleotide binding;4.5338745433773e-07!GO:0051246;regulation of protein metabolic process;4.69982540192899e-07!GO:0044453;nuclear membrane part;4.72331667541279e-07!GO:0051187;cofactor catabolic process;4.72331667541279e-07!GO:0005524;ATP binding;5.94970071514019e-07!GO:0043687;post-translational protein modification;6.62273497459739e-07!GO:0006084;acetyl-CoA metabolic process;8.45847096868096e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.89439835321847e-07!GO:0001558;regulation of cell growth;1.00423778111263e-06!GO:0031252;leading edge;1.02614680101654e-06!GO:0009108;coenzyme biosynthetic process;1.09563183819375e-06!GO:0009109;coenzyme catabolic process;1.15794917999504e-06!GO:0032559;adenyl ribonucleotide binding;1.24263849454783e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.24297940921603e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.24297940921603e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.24297940921603e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.24836838060931e-06!GO:0015980;energy derivation by oxidation of organic compounds;1.60652967845022e-06!GO:0043038;amino acid activation;1.75558510920955e-06!GO:0006418;tRNA aminoacylation for protein translation;1.75558510920955e-06!GO:0043039;tRNA aminoacylation;1.75558510920955e-06!GO:0009117;nucleotide metabolic process;1.97208099623025e-06!GO:0016853;isomerase activity;2.09191783767004e-06!GO:0004298;threonine endopeptidase activity;2.1203333280398e-06!GO:0000139;Golgi membrane;2.17425866018711e-06!GO:0042981;regulation of apoptosis;2.18445744659567e-06!GO:0022402;cell cycle process;2.27468884378164e-06!GO:0000074;regulation of progression through cell cycle;2.65922505892355e-06!GO:0043067;regulation of programmed cell death;2.87152429433377e-06!GO:0051726;regulation of cell cycle;2.87748547749215e-06!GO:0016023;cytoplasmic membrane-bound vesicle;2.89137299781033e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.95546416525612e-06!GO:0031988;membrane-bound vesicle;2.99712691719935e-06!GO:0006366;transcription from RNA polymerase II promoter;2.99712691719935e-06!GO:0006752;group transfer coenzyme metabolic process;3.19130098214943e-06!GO:0043069;negative regulation of programmed cell death;3.24980045669411e-06!GO:0008654;phospholipid biosynthetic process;3.62234459281443e-06!GO:0043066;negative regulation of apoptosis;3.84955203515788e-06!GO:0045259;proton-transporting ATP synthase complex;4.44760926555734e-06!GO:0007005;mitochondrion organization and biogenesis;5.06685869837884e-06!GO:0045786;negative regulation of progression through cell cycle;6.18817086140013e-06!GO:0006364;rRNA processing;6.21733508778866e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.23391717887056e-06!GO:0005525;GTP binding;6.70765920202321e-06!GO:0009719;response to endogenous stimulus;6.98589078702328e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.52307780518462e-06!GO:0004386;helicase activity;8.39997185196504e-06!GO:0044262;cellular carbohydrate metabolic process;9.02907890246694e-06!GO:0008026;ATP-dependent helicase activity;9.29825622619038e-06!GO:0005798;Golgi-associated vesicle;9.52554604316864e-06!GO:0000245;spliceosome assembly;9.69048417866965e-06!GO:0031982;vesicle;9.79801736467076e-06!GO:0006916;anti-apoptosis;1.00096443517012e-05!GO:0016072;rRNA metabolic process;1.00839701282741e-05!GO:0031410;cytoplasmic vesicle;1.06899318097582e-05!GO:0006281;DNA repair;1.07726315351891e-05!GO:0043566;structure-specific DNA binding;1.12527906294066e-05!GO:0051789;response to protein stimulus;1.20781395831921e-05!GO:0006986;response to unfolded protein;1.20781395831921e-05!GO:0065002;intracellular protein transport across a membrane;1.31149901071177e-05!GO:0006613;cotranslational protein targeting to membrane;1.40715641441884e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.61986854466774e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.65555723529428e-05!GO:0003714;transcription corepressor activity;1.95080535534246e-05!GO:0045454;cell redox homeostasis;1.9579557096554e-05!GO:0032446;protein modification by small protein conjugation;2.22060685518384e-05!GO:0019843;rRNA binding;2.32931853027765e-05!GO:0016859;cis-trans isomerase activity;2.3329990363854e-05!GO:0030036;actin cytoskeleton organization and biogenesis;2.34994010083431e-05!GO:0030133;transport vesicle;2.44676433001063e-05!GO:0003697;single-stranded DNA binding;2.51187391886571e-05!GO:0005762;mitochondrial large ribosomal subunit;2.62756750043597e-05!GO:0000315;organellar large ribosomal subunit;2.62756750043597e-05!GO:0005643;nuclear pore;2.76664862231386e-05!GO:0019867;outer membrane;2.82061389647811e-05!GO:0050794;regulation of cellular process;3.16723698162619e-05!GO:0005769;early endosome;3.16723698162619e-05!GO:0016567;protein ubiquitination;3.21297879749861e-05!GO:0031968;organelle outer membrane;3.89921640540259e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.49030208074536e-05!GO:0000151;ubiquitin ligase complex;4.53772914013663e-05!GO:0032561;guanyl ribonucleotide binding;4.53772914013663e-05!GO:0019001;guanyl nucleotide binding;4.53772914013663e-05!GO:0051170;nuclear import;4.54474270710379e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;4.98166437870527e-05!GO:0030029;actin filament-based process;5.05748493338552e-05!GO:0030867;rough endoplasmic reticulum membrane;6.17533901301544e-05!GO:0005667;transcription factor complex;6.30869809970215e-05!GO:0005791;rough endoplasmic reticulum;6.77626599489313e-05!GO:0006606;protein import into nucleus;6.79819248451494e-05!GO:0000278;mitotic cell cycle;6.80290282133247e-05!GO:0008092;cytoskeletal protein binding;8.1090634368402e-05!GO:0031324;negative regulation of cellular metabolic process;8.11258773515471e-05!GO:0016787;hydrolase activity;8.26278295077834e-05!GO:0033116;ER-Golgi intermediate compartment membrane;8.79282846021892e-05!GO:0016564;transcription repressor activity;0.000102451582694306!GO:0006323;DNA packaging;0.000110117409541002!GO:0016126;sterol biosynthetic process;0.000116818740239094!GO:0040008;regulation of growth;0.000146211988009353!GO:0005741;mitochondrial outer membrane;0.00015420732948349!GO:0043021;ribonucleoprotein binding;0.00015859807707379!GO:0051427;hormone receptor binding;0.000159605333347359!GO:0000314;organellar small ribosomal subunit;0.000162645868201108!GO:0005763;mitochondrial small ribosomal subunit;0.000162645868201108!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000185619871201425!GO:0003713;transcription coactivator activity;0.000189902903725603!GO:0046930;pore complex;0.00020810854963121!GO:0004576;oligosaccharyl transferase activity;0.000260964802061629!GO:0050789;regulation of biological process;0.000266394504232264!GO:0009892;negative regulation of metabolic process;0.000268405867179957!GO:0006612;protein targeting to membrane;0.000272075140694876!GO:0046474;glycerophospholipid biosynthetic process;0.000290973885948621!GO:0003724;RNA helicase activity;0.000321835866775127!GO:0008250;oligosaccharyl transferase complex;0.000323735028646464!GO:0035257;nuclear hormone receptor binding;0.000325863702639873!GO:0016568;chromatin modification;0.000333975793674576!GO:0005905;coated pit;0.000351888245786114!GO:0016563;transcription activator activity;0.000352509892045304!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000376460768353269!GO:0016779;nucleotidyltransferase activity;0.000395090498702521!GO:0016740;transferase activity;0.000397702290567026!GO:0008610;lipid biosynthetic process;0.000413696602243451!GO:0005885;Arp2/3 protein complex;0.00043064447728331!GO:0006403;RNA localization;0.000436005231781494!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000459535331380303!GO:0050657;nucleic acid transport;0.000467329471175561!GO:0051236;establishment of RNA localization;0.000467329471175561!GO:0050658;RNA transport;0.000467329471175561!GO:0051276;chromosome organization and biogenesis;0.000511587608801281!GO:0005048;signal sequence binding;0.000541177513657652!GO:0007243;protein kinase cascade;0.000555494539734472!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000555494539734472!GO:0031902;late endosome membrane;0.000592482226253006!GO:0030663;COPI coated vesicle membrane;0.000595645855123638!GO:0030126;COPI vesicle coat;0.000595645855123638!GO:0018196;peptidyl-asparagine modification;0.000683183738700106!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000683183738700106!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000683183738700106!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000797094174158491!GO:0050662;coenzyme binding;0.000806924503164089!GO:0051920;peroxiredoxin activity;0.00086017321059524!GO:0001726;ruffle;0.000864434421896193!GO:0022890;inorganic cation transmembrane transporter activity;0.000864434421896193!GO:0065004;protein-DNA complex assembly;0.000897643210738641!GO:0006793;phosphorus metabolic process;0.000934677965059859!GO:0006796;phosphate metabolic process;0.000934677965059859!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00110684973109986!GO:0016044;membrane organization and biogenesis;0.00112397083771693!GO:0005774;vacuolar membrane;0.00145348574630562!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00149540541592233!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00149540541592233!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00149540541592233!GO:0006891;intra-Golgi vesicle-mediated transport;0.00162751237252821!GO:0046467;membrane lipid biosynthetic process;0.00163132835852904!GO:0016481;negative regulation of transcription;0.00164431658841606!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00164508571007083!GO:0043681;protein import into mitochondrion;0.00170674296635797!GO:0048522;positive regulation of cellular process;0.00178174497573726!GO:0046489;phosphoinositide biosynthetic process;0.00178764294651648!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00184679498540659!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00190660649893824!GO:0005813;centrosome;0.00192815810115154!GO:0006695;cholesterol biosynthetic process;0.00195468202644607!GO:0007010;cytoskeleton organization and biogenesis;0.00197080429968476!GO:0030137;COPI-coated vesicle;0.00204270443468483!GO:0031072;heat shock protein binding;0.002054322687792!GO:0009165;nucleotide biosynthetic process;0.00210435570382128!GO:0016310;phosphorylation;0.00216905208167884!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00216926094686475!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00217288935817415!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00218681545038208!GO:0006118;electron transport;0.00231671555018351!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00232340106432361!GO:0015399;primary active transmembrane transporter activity;0.00232340106432361!GO:0030027;lamellipodium;0.00232510108915859!GO:0006626;protein targeting to mitochondrion;0.00246778323854599!GO:0048500;signal recognition particle;0.00246967916177059!GO:0048471;perinuclear region of cytoplasm;0.00248817616588194!GO:0015630;microtubule cytoskeleton;0.0025569427055062!GO:0016197;endosome transport;0.0026718295606146!GO:0006979;response to oxidative stress;0.00271094233568532!GO:0030132;clathrin coat of coated pit;0.00277724853690815!GO:0007264;small GTPase mediated signal transduction;0.00278273059510747!GO:0043284;biopolymer biosynthetic process;0.00282185432027305!GO:0007050;cell cycle arrest;0.00302773347654094!GO:0051287;NAD binding;0.00306489944651532!GO:0030176;integral to endoplasmic reticulum membrane;0.00325634921169422!GO:0005694;chromosome;0.00326766645464643!GO:0016408;C-acyltransferase activity;0.00327358931642144!GO:0043623;cellular protein complex assembly;0.00354245965605683!GO:0005520;insulin-like growth factor binding;0.00368541318658628!GO:0015992;proton transport;0.00369126521618393!GO:0006818;hydrogen transport;0.00369350911017607!GO:0019899;enzyme binding;0.00373328438959194!GO:0006509;membrane protein ectodomain proteolysis;0.00376797379687207!GO:0033619;membrane protein proteolysis;0.00376797379687207!GO:0003690;double-stranded DNA binding;0.00411342459355971!GO:0008154;actin polymerization and/or depolymerization;0.00415262866481345!GO:0003899;DNA-directed RNA polymerase activity;0.00416108901189545!GO:0006414;translational elongation;0.00420389694433739!GO:0003729;mRNA binding;0.00424868382667183!GO:0044437;vacuolar part;0.00430638512394377!GO:0043488;regulation of mRNA stability;0.0043659247006988!GO:0043487;regulation of RNA stability;0.0043659247006988!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00436767390625429!GO:0004177;aminopeptidase activity;0.00444262937532555!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00444262937532555!GO:0015002;heme-copper terminal oxidase activity;0.00444262937532555!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00444262937532555!GO:0004129;cytochrome-c oxidase activity;0.00444262937532555!GO:0005765;lysosomal membrane;0.00446440619766012!GO:0006650;glycerophospholipid metabolic process;0.00454219058909637!GO:0008186;RNA-dependent ATPase activity;0.00455297175015639!GO:0006333;chromatin assembly or disassembly;0.00476639048474172!GO:0051028;mRNA transport;0.00482537512515452!GO:0030041;actin filament polymerization;0.00520761503594384!GO:0030658;transport vesicle membrane;0.00529890586352688!GO:0005815;microtubule organizing center;0.0054120511545768!GO:0042802;identical protein binding;0.00549559837170286!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00549984494221023!GO:0006383;transcription from RNA polymerase III promoter;0.00555350908236953!GO:0005869;dynactin complex;0.00561737587700346!GO:0006260;DNA replication;0.0056981415502707!GO:0051252;regulation of RNA metabolic process;0.00585043927539448!GO:0030134;ER to Golgi transport vesicle;0.00586311551272895!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00586311551272895!GO:0045047;protein targeting to ER;0.00586311551272895!GO:0019752;carboxylic acid metabolic process;0.00599757388666781!GO:0006082;organic acid metabolic process;0.0061927820298847!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00622074046396695!GO:0030880;RNA polymerase complex;0.00640779045474726!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00661226280512924!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00661226280512924!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0069148670204249!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0069148670204249!GO:0007040;lysosome organization and biogenesis;0.007032715553857!GO:0006007;glucose catabolic process;0.00708375391954244!GO:0030118;clathrin coat;0.00723463003172922!GO:0016363;nuclear matrix;0.00745066717007143!GO:0031901;early endosome membrane;0.00760253295668399!GO:0006839;mitochondrial transport;0.00771000224490359!GO:0030521;androgen receptor signaling pathway;0.00771000224490359!GO:0006740;NADPH regeneration;0.00796767125814332!GO:0006098;pentose-phosphate shunt;0.00796767125814332!GO:0035258;steroid hormone receptor binding;0.00801410824902804!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00823815252046703!GO:0045045;secretory pathway;0.00865500723238719!GO:0030127;COPII vesicle coat;0.00865519479467843!GO:0012507;ER to Golgi transport vesicle membrane;0.00865519479467843!GO:0008180;signalosome;0.0087286504193493!GO:0007034;vacuolar transport;0.00876454551439316!GO:0009967;positive regulation of signal transduction;0.0088493041285137!GO:0008312;7S RNA binding;0.00887039103152022!GO:0005975;carbohydrate metabolic process;0.00888744756690419!GO:0007006;mitochondrial membrane organization and biogenesis;0.00897687358972365!GO:0007033;vacuole organization and biogenesis;0.00904895044351923!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00923599223478753!GO:0051540;metal cluster binding;0.00952324954322071!GO:0051536;iron-sulfur cluster binding;0.00952324954322071!GO:0051128;regulation of cellular component organization and biogenesis;0.00978724948317269!GO:0017166;vinculin binding;0.00978724948317269!GO:0000785;chromatin;0.0103329512076768!GO:0051087;chaperone binding;0.0105466765959265!GO:0045792;negative regulation of cell size;0.0106263409205214!GO:0051329;interphase of mitotic cell cycle;0.0106786829672747!GO:0004004;ATP-dependent RNA helicase activity;0.0107791414029803!GO:0031529;ruffle organization and biogenesis;0.0111744755735105!GO:0008047;enzyme activator activity;0.0113095402482545!GO:0006790;sulfur metabolic process;0.0114318214008026!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.011760920536568!GO:0046483;heterocycle metabolic process;0.0118366359721849!GO:0043022;ribosome binding;0.0120252636426665!GO:0030308;negative regulation of cell growth;0.0123394659736456!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0124462009929468!GO:0000428;DNA-directed RNA polymerase complex;0.0124462009929468!GO:0051539;4 iron, 4 sulfur cluster binding;0.0124532462538201!GO:0006778;porphyrin metabolic process;0.0126379440239437!GO:0033013;tetrapyrrole metabolic process;0.0126379440239437!GO:0046519;sphingoid metabolic process;0.0130146435902835!GO:0003746;translation elongation factor activity;0.0130317337562298!GO:0043492;ATPase activity, coupled to movement of substances;0.0130368213044857!GO:0031418;L-ascorbic acid binding;0.0131578791296038!GO:0048037;cofactor binding;0.0131863221386612!GO:0030384;phosphoinositide metabolic process;0.0133582762362587!GO:0044427;chromosomal part;0.0135864271520348!GO:0033673;negative regulation of kinase activity;0.0137340593803174!GO:0006469;negative regulation of protein kinase activity;0.0137340593803174!GO:0030660;Golgi-associated vesicle membrane;0.0142318033039598!GO:0006892;post-Golgi vesicle-mediated transport;0.0145759711175924!GO:0019798;procollagen-proline dioxygenase activity;0.0146490616248705!GO:0031543;peptidyl-proline dioxygenase activity;0.0151300378386732!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0151520917811985!GO:0000339;RNA cap binding;0.0151754224292258!GO:0006402;mRNA catabolic process;0.0152163058372252!GO:0048487;beta-tubulin binding;0.0152615893645503!GO:0000087;M phase of mitotic cell cycle;0.015476108114865!GO:0016860;intramolecular oxidoreductase activity;0.0158940464933306!GO:0015629;actin cytoskeleton;0.0159365527562161!GO:0048468;cell development;0.0159937719161468!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0163648772659295!GO:0005862;muscle thin filament tropomyosin;0.0166374936533251!GO:0007067;mitosis;0.0171876432624064!GO:0030032;lamellipodium biogenesis;0.0173744217537852!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0177317311935042!GO:0030145;manganese ion binding;0.0181119380920725!GO:0005684;U2-dependent spliceosome;0.0181181760150366!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0181231006465149!GO:0006352;transcription initiation;0.018193583056687!GO:0042158;lipoprotein biosynthetic process;0.018614982496544!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.018614982496544!GO:0003756;protein disulfide isomerase activity;0.018614982496544!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.018614982496544!GO:0015631;tubulin binding;0.0186685902741653!GO:0065009;regulation of a molecular function;0.0188319370823966!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0188344859199164!GO:0016251;general RNA polymerase II transcription factor activity;0.0188344859199164!GO:0000059;protein import into nucleus, docking;0.0188344859199164!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0189545515841318!GO:0006354;RNA elongation;0.0191253960366292!GO:0044452;nucleolar part;0.019267177322844!GO:0006506;GPI anchor biosynthetic process;0.0195799599062627!GO:0051348;negative regulation of transferase activity;0.0198961472722415!GO:0006643;membrane lipid metabolic process;0.0200213796116209!GO:0000902;cell morphogenesis;0.0200213796116209!GO:0032989;cellular structure morphogenesis;0.0200213796116209!GO:0007041;lysosomal transport;0.0200497793211402!GO:0003779;actin binding;0.0200497793211402!GO:0008632;apoptotic program;0.0203575657368314!GO:0006497;protein amino acid lipidation;0.0205111584909457!GO:0007160;cell-matrix adhesion;0.021129872665029!GO:0051168;nuclear export;0.021877916205176!GO:0016272;prefoldin complex;0.0219712035054827!GO:0005832;chaperonin-containing T-complex;0.0220784942367989!GO:0035035;histone acetyltransferase binding;0.0221615853995581!GO:0006672;ceramide metabolic process;0.0222138970510127!GO:0051325;interphase;0.0223596491602178!GO:0065007;biological regulation;0.0223697132647471!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0228856638385037!GO:0042168;heme metabolic process;0.0231435934728941!GO:0000209;protein polyubiquitination;0.0231692763905085!GO:0003711;transcription elongation regulator activity;0.0232602332053191!GO:0050811;GABA receptor binding;0.0233394119903602!GO:0050681;androgen receptor binding;0.0234329064660378!GO:0006607;NLS-bearing substrate import into nucleus;0.0235389575700092!GO:0008139;nuclear localization sequence binding;0.0235389575700092!GO:0048518;positive regulation of biological process;0.0238809685785748!GO:0031589;cell-substrate adhesion;0.0238948881077165!GO:0030125;clathrin vesicle coat;0.0239148340570596!GO:0030665;clathrin coated vesicle membrane;0.0239148340570596!GO:0005096;GTPase activator activity;0.0243094997612318!GO:0006505;GPI anchor metabolic process;0.0243256964425553!GO:0016125;sterol metabolic process;0.02446954336662!GO:0000096;sulfur amino acid metabolic process;0.0248508086401207!GO:0006595;polyamine metabolic process;0.0249464321689812!GO:0006693;prostaglandin metabolic process;0.0253581033310301!GO:0006692;prostanoid metabolic process;0.0253581033310301!GO:0033559;unsaturated fatty acid metabolic process;0.0255623333338758!GO:0006636;unsaturated fatty acid biosynthetic process;0.0255623333338758!GO:0022403;cell cycle phase;0.0256640452912131!GO:0000049;tRNA binding;0.0280993954791617!GO:0051301;cell division;0.0284961060118485!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0285059466325505!GO:0030508;thiol-disulfide exchange intermediate activity;0.0286749777587633!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0288292024225285!GO:0033043;regulation of organelle organization and biogenesis;0.0288292024225285!GO:0008033;tRNA processing;0.0294234614580751!GO:0030984;kininogen binding;0.0298827715988618!GO:0004213;cathepsin B activity;0.0298827715988618!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0305456409281833!GO:0006767;water-soluble vitamin metabolic process;0.0312759616183087!GO:0032940;secretion by cell;0.0312759616183087!GO:0006739;NADP metabolic process;0.0313449078240807!GO:0030503;regulation of cell redox homeostasis;0.0315321247269846!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0321487104786333!GO:0030659;cytoplasmic vesicle membrane;0.0321487104786333!GO:0030119;AP-type membrane coat adaptor complex;0.0324222998516516!GO:0001872;zymosan binding;0.0328104022674158!GO:0001878;response to yeast;0.0328104022674158!GO:0030518;steroid hormone receptor signaling pathway;0.0330844730456454!GO:0015036;disulfide oxidoreductase activity;0.033314699513622!GO:0007021;tubulin folding;0.0334744141842899!GO:0004287;prolyl oligopeptidase activity;0.0335113347926736!GO:0008147;structural constituent of bone;0.0335525250982617!GO:0009225;nucleotide-sugar metabolic process;0.0337210559195977!GO:0006779;porphyrin biosynthetic process;0.0344597183306619!GO:0033014;tetrapyrrole biosynthetic process;0.0344597183306619!GO:0005586;collagen type III;0.0347265188700054!GO:0008064;regulation of actin polymerization and/or depolymerization;0.035866426503169!GO:0006289;nucleotide-excision repair;0.0365625546670266!GO:0008168;methyltransferase activity;0.0366610075396199!GO:0043065;positive regulation of apoptosis;0.0373747593204939!GO:0004228;gelatinase A activity;0.0377989333739693!GO:0001955;blood vessel maturation;0.0377989333739693!GO:0005801;cis-Golgi network;0.0380481443222738!GO:0005100;Rho GTPase activator activity;0.0380481443222738!GO:0045892;negative regulation of transcription, DNA-dependent;0.0391255862887401!GO:0003684;damaged DNA binding;0.0394973991589405!GO:0051272;positive regulation of cell motility;0.0395511189666574!GO:0040017;positive regulation of locomotion;0.0395511189666574!GO:0046365;monosaccharide catabolic process;0.0407500569667021!GO:0019222;regulation of metabolic process;0.0409790537454495!GO:0005583;fibrillar collagen;0.0412001694025637!GO:0006401;RNA catabolic process;0.0415110096230666!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0416120596041819!GO:0006769;nicotinamide metabolic process;0.0417948508994521!GO:0019318;hexose metabolic process;0.0419989166655143!GO:0006334;nucleosome assembly;0.0422967455174842!GO:0006644;phospholipid metabolic process;0.042417987870025!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0425374296713512!GO:0008538;proteasome activator activity;0.0430067123911114!GO:0005637;nuclear inner membrane;0.0430067123911114!GO:0045893;positive regulation of transcription, DNA-dependent;0.0430133159093974!GO:0043414;biopolymer methylation;0.0435130671159994!GO:0043068;positive regulation of programmed cell death;0.0435668587117565!GO:0016741;transferase activity, transferring one-carbon groups;0.043725572123842!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.04412355799305!GO:0031371;ubiquitin conjugating enzyme complex;0.044679270445859!GO:0005996;monosaccharide metabolic process;0.0447736089687062!GO:0048144;fibroblast proliferation;0.0448472411611666!GO:0048145;regulation of fibroblast proliferation;0.0448472411611666!GO:0007030;Golgi organization and biogenesis;0.0457655246947151!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0459256441073973!GO:0030911;TPR domain binding;0.0460839935597939!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0462214900192097!GO:0044255;cellular lipid metabolic process;0.0477300670898248!GO:0031124;mRNA 3'-end processing;0.0479450269773345!GO:0003923;GPI-anchor transamidase activity;0.0479450269773345!GO:0016255;attachment of GPI anchor to protein;0.0479450269773345!GO:0042765;GPI-anchor transamidase complex;0.0479450269773345!GO:0030199;collagen fibril organization;0.0482671388992209!GO:0022408;negative regulation of cell-cell adhesion;0.0489922238397928!GO:0006733;oxidoreduction coenzyme metabolic process;0.0491919283678194!GO:0044275;cellular carbohydrate catabolic process;0.0492669684445804!GO:0008022;protein C-terminus binding;0.049678495925829
|sample_id=11751
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=bone marrow
|top_motifs=ATF6:1.68655407959;EN1,2:1.47052647435;SRF:1.46943415745;GZF1:1.33139194163;MYBL2:1.23200533578;EVI1:1.21805642407;NFATC1..3:1.21024857737;GFI1B:1.21003731814;UFEwm:1.18544283236;HES1:1.13644900041;NR1H4:1.08801893165;ALX4:1.08013153106;PRDM1:1.0701575423;RXR{A,B,G}:1.06802893228;MAFB:0.986345188887;FOXL1:0.969982934379;RXRA_VDR{dimer}:0.947829213288;NANOG{mouse}:0.935864045078;ZNF238:0.932407682667;PAX4:0.910015588174;TAL1_TCF{3,4,12}:0.909527371499;ZIC1..3:0.886138079358;HOX{A4,D4}:0.885724111748;IKZF1:0.870183750332;NFE2L1:0.866929339965;XBP1:0.837225477646;HOX{A5,B5}:0.833049856728;SREBF1,2:0.824283413555;STAT2,4,6:0.81931330428;FOX{I1,J2}:0.797952614755;KLF4:0.795673736983;EBF1:0.789463335868;PAX5:0.787334606882;TFCP2:0.780068889973;TEAD1:0.730252229371;GLI1..3:0.699350967145;ESR1:0.636641007826;AIRE:0.62761950821;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.624432708684;SMAD1..7,9:0.621846692911;PAX1,9:0.603502848915;TLX1..3_NFIC{dimer}:0.59290361299;POU3F1..4:0.578134295522;LHX3,4:0.57542492608;CDC5L:0.574662848847;NKX2-2,8:0.557871105147;DBP:0.542883854806;GTF2I:0.497847913411;FOXO1,3,4:0.49366698076;MTE{core}:0.492891960141;bHLH_family:0.472958780175;NKX3-2:0.471083475865;NKX2-1,4:0.452464911272;GTF2A1,2:0.445739613188;HLF:0.445680745081;AHR_ARNT_ARNT2:0.427858672066;ZNF384:0.422030565858;TEF:0.420948655316;RFX1:0.412572134869;MEF2{A,B,C,D}:0.409891586756;HSF1,2:0.382048995411;IRF1,2:0.379690946489;HAND1,2:0.366789644897;TBP:0.350434036421;NR6A1:0.33726651001;NFE2L2:0.336661564692;YY1:0.326199447791;TP53:0.321139751623;BPTF:0.320172457932;NR3C1:0.313257378051;ZBTB6:0.303843445904;PATZ1:0.291491229412;GATA4:0.285873670017;STAT1,3:0.281168673454;ZNF423:0.278535217317;MZF1:0.260974169786;NKX6-1,2:0.252662912419;NKX3-1:0.252632757563;EGR1..3:0.237278361649;RUNX1..3:0.228561954422;RREB1:0.215567954019;MAZ:0.204439744178;SOX17:0.195461267142;ARID5B:0.19514121516;ELK1,4_GABP{A,B1}:0.194053758773;FOSL2:0.191622580896;HIF1A:0.178832617419;TFAP4:0.159594158912;BACH2:0.150201633311;FOS_FOS{B,L1}_JUN{B,D}:0.146453735182;RFX2..5_RFXANK_RFXAP:0.143739979252;PAX8:0.135618558138;NFIX:0.127817563334;HMX1:0.123716053325;NHLH1,2:0.0992485846931;TFAP2{A,C}:0.0894484468626;HIC1:0.0816080052256;NFE2:0.0560929659689;STAT5{A,B}:0.051799557346;JUN:0.0297179550025;ZNF148:0.0183365819876;PRRX1,2:0.0102214750791;HBP1_HMGB_SSRP1_UBTF:0.00738539387198;MYFfamily:0.00418706959644;NKX2-3_NKX2-5:-0.000455494925812;ZBTB16:-0.000568544757316;NRF1:-0.00099535565055;TBX4,5:-0.00453538790266;XCPE1{core}:-0.00984672018998;ATF2:-0.0100126596789;TFAP2B:-0.0193368833123;HMGA1,2:-0.0263438021256;GFI1:-0.0270740848036;ATF5_CREB3:-0.0275984807891;ONECUT1,2:-0.0313111291567;HNF1A:-0.0323315122554;EP300:-0.0509132240349;ESRRA:-0.0757016582964;SPZ1:-0.0828868957872;CREB1:-0.0883924209759;GCM1,2:-0.0907096588822;ZNF143:-0.0973419387537;SP1:-0.102408284878;AR:-0.173322101153;ZFP161:-0.195598590695;POU6F1:-0.19801650734;ATF4:-0.200574331624;NFIL3:-0.203057533543;IRF7:-0.204043645628;HOX{A6,A7,B6,B7}:-0.209190264011;FOXM1:-0.210350004056;NR5A1,2:-0.216134643105;PAX2:-0.218800351031;FOXD3:-0.262847876721;TLX2:-0.2740177747;REST:-0.288143073131;CRX:-0.310977687307;RORA:-0.32736661711;MTF1:-0.33864871255;MED-1{core}:-0.340966780166;TGIF1:-0.34366291695;DMAP1_NCOR{1,2}_SMARC:-0.345794257202;CEBPA,B_DDIT3:-0.366107878653;NFKB1_REL_RELA:-0.369060367771;HNF4A_NR2F1,2:-0.374545993274;PBX1:-0.399370274404;LEF1_TCF7_TCF7L1,2:-0.402757854244;FOXN1:-0.426818530694;FOX{D1,D2}:-0.476500216725;VSX1,2:-0.477395933959;PAX6:-0.508149530188;CDX1,2,4:-0.510406643965;FOXP3:-0.512391186835;FOXP1:-0.523554149206;SPI1:-0.546804847803;LMO2:-0.555829242138;BREu{core}:-0.56350186759;MYB:-0.587497377461;SOX5:-0.591453125975;ETS1,2:-0.597757550796;SPIB:-0.598815893052;PAX3,7:-0.604861335841;SOX2:-0.608179135492;FOXA2:-0.615894348576;ELF1,2,4:-0.629525391641;FOX{F1,F2,J1}:-0.676249915865;TOPORS:-0.710205001341;ADNP_IRX_SIX_ZHX:-0.725707239073;MYOD1:-0.730812273674;TFDP1:-0.739182576124;PPARG:-0.75352172049;SNAI1..3:-0.779285151685;RBPJ:-0.784014344126;NFY{A,B,C}:-0.785623594514;POU1F1:-0.862285834833;PDX1:-0.874599228542;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.876609411364;POU2F1..3:-0.888147342157;GATA6:-0.897520256051;IKZF2:-0.897539728149;E2F1..5:-0.915270644347;OCT4_SOX2{dimer}:-0.919935101597;ZEB1:-0.97812758529;CUX2:-0.991717709307;POU5F1:-1.02987694471;SOX{8,9,10}:-1.07885409807;T:-1.15476085801;PITX1..3:-1.16746594369;FOXQ1:-1.29927888884;HOXA9_MEIS1:-1.36250706018;ALX1:-1.37531826601;NANOG:-1.74002939085
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11751-123G5;search_select_hide=table117:FF:11751-123G5
}}
}}

Latest revision as of 18:17, 4 June 2020

Name:mesenchymal precursor cell - bone marrow, donor2
Species:Human (Homo sapiens)
Library ID:CNhs12367
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebone marrow
dev stageNA
sexNA
ageNA
cell typemesenchymal precursor cell
cell lineNA
companyNA
collaborationClaudio Schneider LNCIB
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005728
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12367 CAGE DRX008549 DRR009421
Accession ID Hg19

Library idBAMCTSS
CNhs12367 DRZ000846 DRZ002231
Accession ID Hg38

Library idBAMCTSS
CNhs12367 DRZ012196 DRZ013581
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0801
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.261
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.244
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.11
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0983
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.0975
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.679
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0347
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.164
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.177
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.532
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0585
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.302
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.0887
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.435
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular1.152
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.124
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.177
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.4
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.496
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.441
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.0975
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.514
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.0975
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal1.024
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12367

Jaspar motifP-value
MA0002.20.774
MA0003.10.54
MA0004.10.645
MA0006.10.986
MA0007.10.703
MA0009.10.13
MA0014.10.955
MA0017.10.58
MA0018.20.0048
MA0019.10.308
MA0024.18.95678e-5
MA0025.15.01303e-4
MA0027.10.779
MA0028.10.582
MA0029.10.18
MA0030.10.0621
MA0031.10.271
MA0035.20.00299
MA0038.10.0922
MA0039.20.00425
MA0040.10.653
MA0041.10.423
MA0042.10.205
MA0043.10.0415
MA0046.10.126
MA0047.20.932
MA0048.10.0986
MA0050.10.665
MA0051.10.383
MA0052.10.671
MA0055.10.644
MA0057.10.573
MA0058.10.262
MA0059.10.643
MA0060.12.0357e-8
MA0061.10.112
MA0062.21.35642e-4
MA0065.20.377
MA0066.10.57
MA0067.10.23
MA0068.10.62
MA0069.10.243
MA0070.10.546
MA0071.10.316
MA0072.10.732
MA0073.10.895
MA0074.10.115
MA0076.10.525
MA0077.10.0109
MA0078.10.515
MA0079.20.672
MA0080.29.9838e-10
MA0081.10.0264
MA0083.16.39047e-11
MA0084.10.573
MA0087.10.823
MA0088.10.682
MA0090.19.24686e-4
MA0091.10.125
MA0092.10.744
MA0093.10.44
MA0099.20.73
MA0100.10.318
MA0101.10.0122
MA0102.20.639
MA0103.14.77417e-4
MA0104.20.79
MA0105.10.91
MA0106.10.28
MA0107.10.00431
MA0108.20.103
MA0111.10.274
MA0112.20.0384
MA0113.10.661
MA0114.10.408
MA0115.10.0224
MA0116.10.884
MA0117.10.511
MA0119.10.394
MA0122.10.586
MA0124.10.985
MA0125.10.064
MA0131.10.429
MA0135.10.444
MA0136.13.27273e-9
MA0137.20.0322
MA0138.20.534
MA0139.10.536
MA0140.10.059
MA0141.10.806
MA0142.10.153
MA0143.10.186
MA0144.10.155
MA0145.10.479
MA0146.10.479
MA0147.10.48
MA0148.10.51
MA0149.10.941
MA0150.10.804
MA0152.11.88283e-4
MA0153.10.331
MA0154.10.797
MA0155.10.518
MA0156.15.02425e-7
MA0157.10.63
MA0159.10.719
MA0160.10.21
MA0162.10.385
MA0163.10.107
MA0164.10.824
MA0258.10.493
MA0259.10.554



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12367

Novel motifP-value
10.83
100.519
1000.819
1010.578
1020.00331
1030.352
1040.536
1050.278
1060.838
1070.878
1080.613
1090.829
110.96
1100.237
1110.658
1120.746
1130.00403
1140.277
1150.369
1160.275
1170.751
1180.412
1190.936
120.266
1200.881
1210.312
1220.0347
1232.31403e-5
1240.451
1250.961
1260.53
1270.722
1280.472
1290.726
130.702
1300.686
1310.624
1320.463
1330.889
1340.397
1350.776
1360.743
1370.56
1380.424
1390.737
140.62
1400.886
1410.101
1420.272
1430.872
1440.219
1450.762
1460.588
1470.0233
1480.933
1490.134
150.524
1500.868
1510.83
1520.536
1530.419
1540.68
1550.00563
1560.12
1570.36
1580.00555
1590.146
160.0537
1600.638
1610.615
1620.42
1630.865
1640.351
1650.655
1660.00564
1670.278
1680.406
1690.121
170.917
180.413
190.00399
20.972
200.852
210.563
220.322
230.492
240.126
250.189
260.622
270.732
280.492
290.219
30.697
300.337
310.632
324.0196e-13
330.713
340.391
350.67
360.0479
370.0216
380.237
390.216
40.0138
400.0303
410.188
420.341
430.758
440.519
450.991
460.633
470.0976
480.341
490.227
50.668
500.428
510.415
520.958
530.0304
540.635
550.0421
560.904
570.467
580.102
590.341
60.261
600.812
610.651
620.179
630.398
640.431
650.975
660.154
670.987
680.464
690.677
70.226
700.986
710.843
720.923
730.0762
740.128
750.919
760.458
770.0645
780.00275
790.003
80.697
800.379
810.923
820.747
830.894
840.805
850.908
860.229
870.698
880.234
890.0273
90.609
900.518
910.36
920.363
930.884
940.978
950.835
960.501
970.244
980.506
990.0359



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12367


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002092 (bone marrow cell)
0002540 (mesenchymal stem cell of the bone marrow)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002371 (bone marrow)
0001474 (bone element)
0002384 (connective tissue)
0000479 (tissue)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0004765 (skeletal element)
0010317 (germ layer / neural crest derived structure)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0002390 (hematopoietic system)
0002193 (hemolymphoid system)
0002405 (immune system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000269 (human mesenchymal precursor cell of bone marrow sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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