FF:11863-125A9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00004949 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008132;DRR009004;DRZ000429;DRZ001814;DRZ011779;DRZ013164 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000343,FF:0000350,FF:0011101 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure=FF:0000343,FF:0011101,FF:11863-125A9 | |fonse_treatment_closure=FF:0000343,FF:0011101,FF:11863-125A9 | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor1.CNhs13468.11863-125A9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor1.CNhs13468.11863-125A9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor1.CNhs13468.11863-125A9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor1.CNhs13468.11863-125A9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor1.CNhs13468.11863-125A9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11863-125A9 | |id=FF:11863-125A9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0011101 | ||
|is_obsolete= | |||
|library_id=CNhs13468 | |||
|library_id_phase_based=2:CNhs13468 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11863 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11863 | |||
|name=CD14+ monocytes - mock treated, donor1 | |name=CD14+ monocytes - mock treated, donor1 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13468,LSID1024,release012,COMPLETED | |profile_hcage=CNhs13468,LSID1024,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=125 | |rna_box=125 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=4.48095 | |rna_weight_ug=4.48095 | ||
|sample_age=69 | |sample_age=69 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.16984311537794e-248!GO:0043227;membrane-bound organelle;5.23523004910678e-134!GO:0043231;intracellular membrane-bound organelle;1.13434753991024e-133!GO:0005737;cytoplasm;1.38686215054824e-130!GO:0043226;organelle;5.49385503703825e-125!GO:0043229;intracellular organelle;4.0428355926848e-124!GO:0044444;cytoplasmic part;7.30420926546965e-87!GO:0044422;organelle part;3.21705884552484e-75!GO:0044446;intracellular organelle part;1.42208560115117e-73!GO:0043170;macromolecule metabolic process;2.04421986710113e-70!GO:0044237;cellular metabolic process;2.52635714108642e-70!GO:0044238;primary metabolic process;5.07922700684182e-70!GO:0005515;protein binding;7.72651991379373e-66!GO:0032991;macromolecular complex;2.67425524190042e-61!GO:0005634;nucleus;1.70602399736799e-57!GO:0003723;RNA binding;8.74837741929465e-54!GO:0030529;ribonucleoprotein complex;2.26647297696766e-52!GO:0044428;nuclear part;1.13094345687871e-50!GO:0019538;protein metabolic process;2.18474811806716e-47!GO:0033036;macromolecule localization;1.23206206381501e-44!GO:0015031;protein transport;1.71248824445492e-44!GO:0045184;establishment of protein localization;2.18995807714683e-44!GO:0044267;cellular protein metabolic process;9.85608650402518e-44!GO:0044260;cellular macromolecule metabolic process;1.46338263335819e-43!GO:0008104;protein localization;8.34192228838577e-42!GO:0043233;organelle lumen;3.39144758869356e-41!GO:0031974;membrane-enclosed lumen;3.39144758869356e-41!GO:0043283;biopolymer metabolic process;4.29234949760101e-41!GO:0010467;gene expression;1.18046456338291e-39!GO:0006412;translation;1.57232651080276e-39!GO:0005829;cytosol;1.92511160214775e-35!GO:0031090;organelle membrane;2.2720560329426e-34!GO:0016071;mRNA metabolic process;2.4548481790652e-33!GO:0006396;RNA processing;1.233661522029e-32!GO:0031981;nuclear lumen;3.08750087618802e-32!GO:0043234;protein complex;3.69778373361842e-31!GO:0009059;macromolecule biosynthetic process;8.68600278357066e-30!GO:0005739;mitochondrion;1.31110603955319e-29!GO:0008380;RNA splicing;1.61428582070821e-29!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.28108424146494e-29!GO:0046907;intracellular transport;4.3760227856636e-29!GO:0006886;intracellular protein transport;5.39199131901642e-29!GO:0006397;mRNA processing;9.56385470948767e-29!GO:0016043;cellular component organization and biogenesis;8.47322280746299e-28!GO:0005840;ribosome;1.47555481926915e-27!GO:0006915;apoptosis;1.3314244677447e-26!GO:0012501;programmed cell death;1.45627436364228e-26!GO:0009058;biosynthetic process;2.17819924125144e-26!GO:0044249;cellular biosynthetic process;6.54275733575106e-26!GO:0031967;organelle envelope;8.36531892423375e-26!GO:0031975;envelope;1.64717154917022e-25!GO:0003735;structural constituent of ribosome;2.24004414709584e-25!GO:0008219;cell death;3.50386397590081e-25!GO:0016265;death;3.50386397590081e-25!GO:0033279;ribosomal subunit;5.22207798902904e-24!GO:0005654;nucleoplasm;8.98444342488887e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.62368030924299e-23!GO:0065003;macromolecular complex assembly;1.24096064518342e-22!GO:0051649;establishment of cellular localization;1.33153452128614e-22!GO:0044445;cytosolic part;2.41151364582736e-22!GO:0051641;cellular localization;9.61994524283443e-22!GO:0044429;mitochondrial part;1.26349840190337e-21!GO:0005681;spliceosome;1.42170126745439e-21!GO:0044451;nucleoplasm part;4.04205079771349e-20!GO:0000166;nucleotide binding;2.50719501922155e-19!GO:0008134;transcription factor binding;2.67138148557717e-19!GO:0022607;cellular component assembly;3.32880363333969e-19!GO:0003676;nucleic acid binding;3.75381960748155e-19!GO:0016070;RNA metabolic process;4.69773308285498e-19!GO:0016192;vesicle-mediated transport;8.29160058593289e-19!GO:0043412;biopolymer modification;2.52847984201685e-18!GO:0006512;ubiquitin cycle;3.62788458866044e-18!GO:0005740;mitochondrial envelope;2.31272911861425e-17!GO:0042981;regulation of apoptosis;3.08554210973229e-17!GO:0006119;oxidative phosphorylation;4.39333809162304e-17!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.53224848673865e-17!GO:0006464;protein modification process;5.2159860988866e-17!GO:0043067;regulation of programmed cell death;6.10727975965853e-17!GO:0044265;cellular macromolecule catabolic process;6.14137910731537e-17!GO:0031966;mitochondrial membrane;1.1470020953388e-16!GO:0007243;protein kinase cascade;5.07784360693612e-16!GO:0043687;post-translational protein modification;5.16217440199074e-16!GO:0019866;organelle inner membrane;5.87810511142456e-16!GO:0048770;pigment granule;6.23969778792816e-16!GO:0042470;melanosome;6.23969778792816e-16!GO:0050794;regulation of cellular process;2.54903866654947e-15!GO:0022618;protein-RNA complex assembly;3.05953081513299e-15!GO:0006996;organelle organization and biogenesis;1.00894324603305e-14!GO:0005773;vacuole;1.12926480850191e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.28303444439121e-14!GO:0016604;nuclear body;1.32376721406228e-14!GO:0016462;pyrophosphatase activity;1.49755346444672e-14!GO:0006605;protein targeting;1.49877850795738e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;1.62559828943925e-14!GO:0017111;nucleoside-triphosphatase activity;1.64778732931974e-14!GO:0019941;modification-dependent protein catabolic process;2.51642519660731e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.51642519660731e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.64243070301816e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;2.99979244975203e-14!GO:0044257;cellular protein catabolic process;3.71887785549064e-14!GO:0032553;ribonucleotide binding;6.49360703207443e-14!GO:0032555;purine ribonucleotide binding;6.49360703207443e-14!GO:0007249;I-kappaB kinase/NF-kappaB cascade;7.47060596226794e-14!GO:0016874;ligase activity;9.26644917071814e-14!GO:0007242;intracellular signaling cascade;1.11027426112727e-13!GO:0048523;negative regulation of cellular process;1.19064558260623e-13!GO:0043285;biopolymer catabolic process;1.47298055516362e-13!GO:0017076;purine nucleotide binding;1.88314679039468e-13!GO:0005743;mitochondrial inner membrane;1.88565207563377e-13!GO:0000323;lytic vacuole;3.07116206288166e-13!GO:0005764;lysosome;3.07116206288166e-13!GO:0015934;large ribosomal subunit;4.23560815036369e-13!GO:0016607;nuclear speck;6.1421501665286e-13!GO:0006913;nucleocytoplasmic transport;8.26571527509583e-13!GO:0009057;macromolecule catabolic process;8.65543689151251e-13!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.38095231116419e-12!GO:0051169;nuclear transport;1.60577445654242e-12!GO:0005768;endosome;1.72672262891832e-12!GO:0003712;transcription cofactor activity;1.75366093193555e-12!GO:0005794;Golgi apparatus;1.97783769627363e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.1445047825907e-12!GO:0006793;phosphorus metabolic process;2.56076707421621e-12!GO:0006796;phosphate metabolic process;2.56076707421621e-12!GO:0006259;DNA metabolic process;2.99310510693664e-12!GO:0000502;proteasome complex (sensu Eukaryota);3.16325846653146e-12!GO:0044455;mitochondrial membrane part;3.28030280337751e-12!GO:0043069;negative regulation of programmed cell death;3.89208738680753e-12!GO:0043066;negative regulation of apoptosis;4.49725695838418e-12!GO:0048519;negative regulation of biological process;4.9299989913005e-12!GO:0008135;translation factor activity, nucleic acid binding;6.41805035730496e-12!GO:0012505;endomembrane system;7.34459109114457e-12!GO:0044248;cellular catabolic process;8.82717398571521e-12!GO:0015935;small ribosomal subunit;9.09542405391873e-12!GO:0050789;regulation of biological process;9.4835632330035e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.08264675163944e-11!GO:0006457;protein folding;2.94694215005007e-11!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.63290587014975e-11!GO:0003743;translation initiation factor activity;4.1085317478475e-11!GO:0051246;regulation of protein metabolic process;5.87475185282149e-11!GO:0048193;Golgi vesicle transport;6.17604289800393e-11!GO:0016310;phosphorylation;8.24595164820404e-11!GO:0065009;regulation of a molecular function;1.17449528097813e-10!GO:0030163;protein catabolic process;1.18420386917381e-10!GO:0006366;transcription from RNA polymerase II promoter;2.77949867314547e-10!GO:0051186;cofactor metabolic process;3.09573872598113e-10!GO:0006413;translational initiation;4.46423956941783e-10!GO:0005746;mitochondrial respiratory chain;5.96532281371527e-10!GO:0006916;anti-apoptosis;6.0292190623198e-10!GO:0005524;ATP binding;7.52442506511367e-10!GO:0019222;regulation of metabolic process;8.37770341975716e-10!GO:0008639;small protein conjugating enzyme activity;8.37770341975716e-10!GO:0006446;regulation of translational initiation;8.38276152598151e-10!GO:0065007;biological regulation;9.44557664621761e-10!GO:0032559;adenyl ribonucleotide binding;1.07920197164911e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.27710265287088e-09!GO:0000375;RNA splicing, via transesterification reactions;1.27710265287088e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.27710265287088e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.43230305893705e-09!GO:0004842;ubiquitin-protein ligase activity;1.9019396439447e-09!GO:0019787;small conjugating protein ligase activity;2.33993677115576e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.15541687320741e-09!GO:0030554;adenyl nucleotide binding;3.22293453487048e-09!GO:0050136;NADH dehydrogenase (quinone) activity;3.4598512840808e-09!GO:0003954;NADH dehydrogenase activity;3.4598512840808e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.4598512840808e-09!GO:0019829;cation-transporting ATPase activity;3.76256444591613e-09!GO:0006732;coenzyme metabolic process;4.050926422477e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.51912369007279e-09!GO:0017038;protein import;5.79824033834592e-09!GO:0016787;hydrolase activity;8.91419018530924e-09!GO:0005783;endoplasmic reticulum;1.16978386100887e-08!GO:0006950;response to stress;1.27390999893546e-08!GO:0015986;ATP synthesis coupled proton transport;1.30883072740411e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.30883072740411e-08!GO:0005635;nuclear envelope;1.30883072740411e-08!GO:0031324;negative regulation of cellular metabolic process;1.81434558399973e-08!GO:0051082;unfolded protein binding;1.87947142432378e-08!GO:0003713;transcription coactivator activity;1.93008462218009e-08!GO:0005730;nucleolus;2.02637981128122e-08!GO:0008047;enzyme activator activity;2.05221885592447e-08!GO:0008565;protein transporter activity;2.30961366073188e-08!GO:0005770;late endosome;2.86752093861683e-08!GO:0051170;nuclear import;3.33448470027541e-08!GO:0016881;acid-amino acid ligase activity;3.37520515563161e-08!GO:0016568;chromatin modification;5.56118302556072e-08!GO:0042775;organelle ATP synthesis coupled electron transport;5.72216560260124e-08!GO:0042773;ATP synthesis coupled electron transport;5.72216560260124e-08!GO:0009152;purine ribonucleotide biosynthetic process;5.76217014702552e-08!GO:0009150;purine ribonucleotide metabolic process;5.90751898276046e-08!GO:0002376;immune system process;6.12702913556468e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.41528877013639e-08!GO:0007264;small GTPase mediated signal transduction;6.5062084409944e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.6032211763205e-08!GO:0006417;regulation of translation;6.87953591882929e-08!GO:0006606;protein import into nucleus;6.95088294747597e-08!GO:0044440;endosomal part;7.17290583143297e-08!GO:0010008;endosome membrane;7.17290583143297e-08!GO:0043228;non-membrane-bound organelle;7.65543509554153e-08!GO:0043232;intracellular non-membrane-bound organelle;7.65543509554153e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;8.47470859197605e-08!GO:0030964;NADH dehydrogenase complex (quinone);1.00591654878749e-07!GO:0045271;respiratory chain complex I;1.00591654878749e-07!GO:0005747;mitochondrial respiratory chain complex I;1.00591654878749e-07!GO:0031323;regulation of cellular metabolic process;1.03833475990955e-07!GO:0006163;purine nucleotide metabolic process;1.07414253873981e-07!GO:0009259;ribonucleotide metabolic process;1.11858880727945e-07!GO:0006164;purine nucleotide biosynthetic process;1.19251591735617e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.23205082187827e-07!GO:0044453;nuclear membrane part;1.30198992300766e-07!GO:0031965;nuclear membrane;1.32367425759635e-07!GO:0042623;ATPase activity, coupled;1.36392720044299e-07!GO:0005774;vacuolar membrane;1.48032280882779e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.53411041112822e-07!GO:0006754;ATP biosynthetic process;1.53587708203398e-07!GO:0006753;nucleoside phosphate metabolic process;1.53587708203398e-07!GO:0006461;protein complex assembly;1.59059752890921e-07!GO:0016564;transcription repressor activity;1.59059752890921e-07!GO:0016887;ATPase activity;1.59059752890921e-07!GO:0050790;regulation of catalytic activity;1.87537993986889e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.04598547502365e-07!GO:0048522;positive regulation of cellular process;2.24029956042647e-07!GO:0009967;positive regulation of signal transduction;2.32323695630147e-07!GO:0009260;ribonucleotide biosynthetic process;2.51686106923578e-07!GO:0006323;DNA packaging;2.72421584281117e-07!GO:0005793;ER-Golgi intermediate compartment;3.39097826241781e-07!GO:0019899;enzyme binding;3.5524003745076e-07!GO:0003924;GTPase activity;3.83067431043564e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.86404172728106e-07!GO:0016481;negative regulation of transcription;3.86404172728106e-07!GO:0009892;negative regulation of metabolic process;4.77327034807944e-07!GO:0043065;positive regulation of apoptosis;5.12686989954639e-07!GO:0009056;catabolic process;5.78588649987867e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.8664399128877e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.8664399128877e-07!GO:0044432;endoplasmic reticulum part;5.86804259324483e-07!GO:0005525;GTP binding;6.84645354664853e-07!GO:0043068;positive regulation of programmed cell death;7.01462418164712e-07!GO:0046034;ATP metabolic process;7.04315837722267e-07!GO:0044437;vacuolar part;8.07955520366894e-07!GO:0009142;nucleoside triphosphate biosynthetic process;8.97553551959779e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.97553551959779e-07!GO:0007049;cell cycle;8.99344438307162e-07!GO:0005765;lysosomal membrane;9.00805555282928e-07!GO:0016563;transcription activator activity;9.40666695219162e-07!GO:0031326;regulation of cellular biosynthetic process;9.59370631246665e-07!GO:0051188;cofactor biosynthetic process;1.00427442415113e-06!GO:0048518;positive regulation of biological process;1.14417714075583e-06!GO:0010468;regulation of gene expression;1.28138958671182e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.33792828664812e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.33792828664812e-06!GO:0031982;vesicle;1.33862460943387e-06!GO:0032446;protein modification by small protein conjugation;1.39879187157698e-06!GO:0045786;negative regulation of progression through cell cycle;1.41294457662047e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.47539170799441e-06!GO:0009889;regulation of biosynthetic process;1.53221071563046e-06!GO:0030695;GTPase regulator activity;1.58072962288294e-06!GO:0009108;coenzyme biosynthetic process;1.69441376772078e-06!GO:0051726;regulation of cell cycle;1.78295026142272e-06!GO:0006974;response to DNA damage stimulus;1.80554875484907e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.87721887370742e-06!GO:0016044;membrane organization and biogenesis;2.02309396599757e-06!GO:0050657;nucleic acid transport;2.77574670181943e-06!GO:0051236;establishment of RNA localization;2.77574670181943e-06!GO:0050658;RNA transport;2.77574670181943e-06!GO:0006917;induction of apoptosis;2.78727989135556e-06!GO:0000074;regulation of progression through cell cycle;2.79721261505931e-06!GO:0016567;protein ubiquitination;2.99955439405329e-06!GO:0048475;coated membrane;2.99955439405329e-06!GO:0030117;membrane coat;2.99955439405329e-06!GO:0005839;proteasome core complex (sensu Eukaryota);3.06000545553783e-06!GO:0009966;regulation of signal transduction;3.27252549251207e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.27256130138406e-06!GO:0009615;response to virus;3.48720532949188e-06!GO:0009055;electron carrier activity;3.57407754754971e-06!GO:0006403;RNA localization;3.5760593292706e-06!GO:0031980;mitochondrial lumen;3.63373974247347e-06!GO:0005759;mitochondrial matrix;3.63373974247347e-06!GO:0005643;nuclear pore;3.88713294707202e-06!GO:0005096;GTPase activator activity;3.90242904273867e-06!GO:0012502;induction of programmed cell death;4.39272600158505e-06!GO:0006752;group transfer coenzyme metabolic process;4.73973387752124e-06!GO:0009141;nucleoside triphosphate metabolic process;5.14783042184841e-06!GO:0006888;ER to Golgi vesicle-mediated transport;5.51589604480083e-06!GO:0048468;cell development;6.05014838751008e-06!GO:0006955;immune response;7.08171459952885e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.32926400944658e-06!GO:0004386;helicase activity;7.79300211005951e-06!GO:0005769;early endosome;8.59010982653014e-06!GO:0008026;ATP-dependent helicase activity;9.19364131144586e-06!GO:0031410;cytoplasmic vesicle;9.40797737818546e-06!GO:0031252;leading edge;1.05460748154971e-05!GO:0032561;guanyl ribonucleotide binding;1.1545412496816e-05!GO:0019001;guanyl nucleotide binding;1.1545412496816e-05!GO:0030120;vesicle coat;1.26148427463908e-05!GO:0030662;coated vesicle membrane;1.26148427463908e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.29735830679686e-05!GO:0006350;transcription;1.43163849726151e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.53295254283021e-05!GO:0051276;chromosome organization and biogenesis;1.55487641299141e-05!GO:0005789;endoplasmic reticulum membrane;1.57383757011681e-05!GO:0004298;threonine endopeptidase activity;1.77978648952164e-05!GO:0031988;membrane-bound vesicle;1.92377284820993e-05!GO:0043566;structure-specific DNA binding;2.19434875897227e-05!GO:0016197;endosome transport;2.45428762287127e-05!GO:0051028;mRNA transport;3.23168955634507e-05!GO:0005057;receptor signaling protein activity;3.35158426551823e-05!GO:0000151;ubiquitin ligase complex;3.36374215032194e-05!GO:0032940;secretion by cell;3.50675244024133e-05!GO:0046930;pore complex;3.89204854681979e-05!GO:0045259;proton-transporting ATP synthase complex;4.00514719982859e-05!GO:0051336;regulation of hydrolase activity;4.1888920306967e-05!GO:0003724;RNA helicase activity;4.26080447824406e-05!GO:0003714;transcription corepressor activity;4.5529716000801e-05!GO:0031902;late endosome membrane;4.65034334752131e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;4.86301138282886e-05!GO:0006401;RNA catabolic process;4.98027261593899e-05!GO:0009060;aerobic respiration;5.48213235854272e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;5.53087426752538e-05!GO:0015399;primary active transmembrane transporter activity;5.53087426752538e-05!GO:0005798;Golgi-associated vesicle;5.56485705464638e-05!GO:0004674;protein serine/threonine kinase activity;5.61516900748298e-05!GO:0006281;DNA repair;6.07693221043862e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.39901899107581e-05!GO:0016023;cytoplasmic membrane-bound vesicle;6.47143045686502e-05!GO:0005083;small GTPase regulator activity;6.49496118451152e-05!GO:0065002;intracellular protein transport across a membrane;6.57663714668987e-05!GO:0006613;cotranslational protein targeting to membrane;6.7635026720769e-05!GO:0003697;single-stranded DNA binding;7.08799663921991e-05!GO:0006897;endocytosis;7.12645737517098e-05!GO:0010324;membrane invagination;7.12645737517098e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.57574623083571e-05!GO:0000245;spliceosome assembly;7.88579000251217e-05!GO:0007265;Ras protein signal transduction;7.94044336531148e-05!GO:0044431;Golgi apparatus part;9.26740664694806e-05!GO:0046822;regulation of nucleocytoplasmic transport;9.55529145135061e-05!GO:0008632;apoptotic program;0.000107609591405964!GO:0009607;response to biotic stimulus;0.000141877345911457!GO:0030036;actin cytoskeleton organization and biogenesis;0.000141877345911457!GO:0051427;hormone receptor binding;0.000155428645463887!GO:0051168;nuclear export;0.000155875413124758!GO:0016740;transferase activity;0.000158845282953387!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000167554603824377!GO:0005885;Arp2/3 protein complex;0.000195924818683229!GO:0008654;phospholipid biosynthetic process;0.000213736662025513!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000231535831979978!GO:0030532;small nuclear ribonucleoprotein complex;0.000244992187337966!GO:0035257;nuclear hormone receptor binding;0.000266013700872719!GO:0006818;hydrogen transport;0.000269587089075625!GO:0045892;negative regulation of transcription, DNA-dependent;0.000279755530470243!GO:0045333;cellular respiration;0.000279755530470243!GO:0001726;ruffle;0.000302991884183584!GO:0001816;cytokine production;0.000330771837551327!GO:0042254;ribosome biogenesis and assembly;0.000385167630336507!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000389512904433266!GO:0005761;mitochondrial ribosome;0.000389584237169569!GO:0000313;organellar ribosome;0.000389584237169569!GO:0009719;response to endogenous stimulus;0.000397854658457725!GO:0006612;protein targeting to membrane;0.000407095628720546!GO:0015992;proton transport;0.00042455592631396!GO:0008234;cysteine-type peptidase activity;0.000437796485979275!GO:0043492;ATPase activity, coupled to movement of substances;0.000439694293713382!GO:0007034;vacuolar transport;0.000461384430181194!GO:0022402;cell cycle process;0.000470894868347285!GO:0006402;mRNA catabolic process;0.00048137126434956!GO:0005667;transcription factor complex;0.000489208771494285!GO:0051223;regulation of protein transport;0.00052096577511952!GO:0008186;RNA-dependent ATPase activity;0.000524288586925987!GO:0045449;regulation of transcription;0.000529598602898318!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000529970720334429!GO:0007050;cell cycle arrest;0.000562181086889177!GO:0007040;lysosome organization and biogenesis;0.00059476794736632!GO:0007005;mitochondrion organization and biogenesis;0.00059476794736632!GO:0046519;sphingoid metabolic process;0.000619284057892323!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000713979076375325!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.000765886049747142!GO:0008270;zinc ion binding;0.000765886049747142!GO:0022890;inorganic cation transmembrane transporter activity;0.000823432885521086!GO:0006351;transcription, DNA-dependent;0.000823432885521086!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000832216779876922!GO:0065004;protein-DNA complex assembly;0.000855962294703782!GO:0032774;RNA biosynthetic process;0.000861886546380189!GO:0033157;regulation of intracellular protein transport;0.000913048069988651!GO:0042306;regulation of protein import into nucleus;0.000913048069988651!GO:0006643;membrane lipid metabolic process;0.00100624129551232!GO:0045045;secretory pathway;0.00108707543077117!GO:0005637;nuclear inner membrane;0.00108917273985269!GO:0006672;ceramide metabolic process;0.00114128923174862!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00117687883375112!GO:0003729;mRNA binding;0.00133025725814355!GO:0043623;cellular protein complex assembly;0.00137731155703338!GO:0009893;positive regulation of metabolic process;0.00144230925963966!GO:0007033;vacuole organization and biogenesis;0.0014633911901006!GO:0030029;actin filament-based process;0.00150345962573554!GO:0004004;ATP-dependent RNA helicase activity;0.00153690710802153!GO:0016301;kinase activity;0.00155178041711994!GO:0009117;nucleotide metabolic process;0.00155797197087118!GO:0016779;nucleotidyltransferase activity;0.00166389045771628!GO:0005741;mitochondrial outer membrane;0.00170688602941818!GO:0043087;regulation of GTPase activity;0.00176335080707552!GO:0005099;Ras GTPase activator activity;0.00177830124325697!GO:0002757;immune response-activating signal transduction;0.00180535890066176!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00180535890066176!GO:0004812;aminoacyl-tRNA ligase activity;0.00180535890066176!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00180535890066176!GO:0007041;lysosomal transport;0.00180535890066176!GO:0033116;ER-Golgi intermediate compartment membrane;0.00184536328745874!GO:0051090;regulation of transcription factor activity;0.00186344650718299!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00199520929184451!GO:0044262;cellular carbohydrate metabolic process;0.00208378035570124!GO:0043085;positive regulation of catalytic activity;0.00208464575564268!GO:0006099;tricarboxylic acid cycle;0.0021286038913841!GO:0046356;acetyl-CoA catabolic process;0.0021286038913841!GO:0030099;myeloid cell differentiation;0.00214751211695785!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00219483690045109!GO:0016251;general RNA polymerase II transcription factor activity;0.00222519134354316!GO:0045454;cell redox homeostasis;0.00224083441957126!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00234858719490363!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00247638970153588!GO:0046914;transition metal ion binding;0.00249363161237826!GO:0042990;regulation of transcription factor import into nucleus;0.00257452734474559!GO:0042991;transcription factor import into nucleus;0.00257452734474559!GO:0006399;tRNA metabolic process;0.00261887479467617!GO:0060090;molecular adaptor activity;0.00277688722321792!GO:0046983;protein dimerization activity;0.0027789010295747!GO:0019904;protein domain specific binding;0.00278050127657001!GO:0051187;cofactor catabolic process;0.00279219156217211!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00280983751898218!GO:0000139;Golgi membrane;0.00297269310747822!GO:0051338;regulation of transferase activity;0.00297641470710418!GO:0043038;amino acid activation;0.00298330599709903!GO:0006418;tRNA aminoacylation for protein translation;0.00298330599709903!GO:0043039;tRNA aminoacylation;0.00298330599709903!GO:0006333;chromatin assembly or disassembly;0.00301690972071758!GO:0006352;transcription initiation;0.00320790649227032!GO:0006919;caspase activation;0.0032817828008359!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00328353945161844!GO:0002274;myeloid leukocyte activation;0.00331830299083194!GO:0043281;regulation of caspase activity;0.00332333280331188!GO:0043021;ribonucleoprotein binding;0.00342867366696976!GO:0016363;nuclear matrix;0.00344197351498362!GO:0048487;beta-tubulin binding;0.00344257944857!GO:0030041;actin filament polymerization;0.00372541619585687!GO:0045941;positive regulation of transcription;0.00372737207109553!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00372856219414269!GO:0031901;early endosome membrane;0.00373528070457911!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00397135970880083!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00397135970880083!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00397135970880083!GO:0002764;immune response-regulating signal transduction;0.00397304575173619!GO:0003690;double-stranded DNA binding;0.00404482389438878!GO:0048471;perinuclear region of cytoplasm;0.00404942148547039!GO:0051252;regulation of RNA metabolic process;0.00419376042967512!GO:0043280;positive regulation of caspase activity;0.00419376042967512!GO:0046966;thyroid hormone receptor binding;0.00420249502987017!GO:0045893;positive regulation of transcription, DNA-dependent;0.00447222239507965!GO:0006084;acetyl-CoA metabolic process;0.00464143552572177!GO:0006891;intra-Golgi vesicle-mediated transport;0.00496389221131297!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00499502591589925!GO:0019867;outer membrane;0.00504048405697975!GO:0018193;peptidyl-amino acid modification;0.00522026950853206!GO:0006607;NLS-bearing substrate import into nucleus;0.00527289284970521!GO:0031072;heat shock protein binding;0.00540094048848965!GO:0006468;protein amino acid phosphorylation;0.00547721132025738!GO:0051789;response to protein stimulus;0.0055588751372043!GO:0006986;response to unfolded protein;0.0055588751372043!GO:0030149;sphingolipid catabolic process;0.00556897437332956!GO:0043549;regulation of kinase activity;0.00591828006414645!GO:0046467;membrane lipid biosynthetic process;0.00616385363493563!GO:0031968;organelle outer membrane;0.00618805634259326!GO:0030867;rough endoplasmic reticulum membrane;0.00620135422265433!GO:0004185;serine carboxypeptidase activity;0.00623502580319659!GO:0005813;centrosome;0.00623731716693203!GO:0045637;regulation of myeloid cell differentiation;0.00627099743746937!GO:0033367;protein localization in mast cell secretory granule;0.00627099743746937!GO:0033365;protein localization in organelle;0.00627099743746937!GO:0033371;T cell secretory granule organization and biogenesis;0.00627099743746937!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.00627099743746937!GO:0033375;protease localization in T cell secretory granule;0.00627099743746937!GO:0042629;mast cell granule;0.00627099743746937!GO:0033377;maintenance of protein localization in T cell secretory granule;0.00627099743746937!GO:0033364;mast cell secretory granule organization and biogenesis;0.00627099743746937!GO:0033380;granzyme B localization in T cell secretory granule;0.00627099743746937!GO:0033379;maintenance of protease localization in T cell secretory granule;0.00627099743746937!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.00627099743746937!GO:0033368;protease localization in mast cell secretory granule;0.00627099743746937!GO:0033366;protein localization in secretory granule;0.00627099743746937!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.00627099743746937!GO:0033374;protein localization in T cell secretory granule;0.00627099743746937!GO:0005694;chromosome;0.00627099743746937!GO:0006355;regulation of transcription, DNA-dependent;0.00683493175935359!GO:0016072;rRNA metabolic process;0.00684773539800718!GO:0032386;regulation of intracellular transport;0.00707265774164208!GO:0000785;chromatin;0.00712872269133019!GO:0030658;transport vesicle membrane;0.00734857756029876!GO:0006650;glycerophospholipid metabolic process;0.00745588762938836!GO:0009109;coenzyme catabolic process;0.00751790195963398!GO:0031625;ubiquitin protein ligase binding;0.00756922388390579!GO:0030118;clathrin coat;0.00756922388390579!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00757211953436575!GO:0016791;phosphoric monoester hydrolase activity;0.00775357786487268!GO:0031325;positive regulation of cellular metabolic process;0.0078348267580211!GO:0032318;regulation of Ras GTPase activity;0.00824642037510018!GO:0007259;JAK-STAT cascade;0.00844097643958432!GO:0045859;regulation of protein kinase activity;0.00844226804891157!GO:0008624;induction of apoptosis by extracellular signals;0.00853209703825945!GO:0006364;rRNA processing;0.00874044992916784!GO:0004177;aminopeptidase activity;0.00890809203701153!GO:0000287;magnesium ion binding;0.00902874185724277!GO:0019377;glycolipid catabolic process;0.00902874185724277!GO:0005484;SNAP receptor activity;0.00912845367639804!GO:0006611;protein export from nucleus;0.0100046225030431!GO:0030134;ER to Golgi transport vesicle;0.0100335945321222!GO:0006091;generation of precursor metabolites and energy;0.0101713747120104!GO:0004722;protein serine/threonine phosphatase activity;0.0108701537293001!GO:0030518;steroid hormone receptor signaling pathway;0.0109365850933244!GO:0004197;cysteine-type endopeptidase activity;0.0109912714624298!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0110018824326527!GO:0030097;hemopoiesis;0.0111388271067201!GO:0051092;activation of NF-kappaB transcription factor;0.0112981136087623!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0113039256615053!GO:0006458;'de novo' protein folding;0.0115280533616936!GO:0051084;'de novo' posttranslational protein folding;0.0115280533616936!GO:0009165;nucleotide biosynthetic process;0.0115433122096842!GO:0022415;viral reproductive process;0.0118197895509901!GO:0048500;signal recognition particle;0.01185584767249!GO:0030127;COPII vesicle coat;0.011978231268305!GO:0012507;ER to Golgi transport vesicle membrane;0.011978231268305!GO:0051345;positive regulation of hydrolase activity;0.0120494601709463!GO:0051707;response to other organism;0.0122144089527034!GO:0008656;caspase activator activity;0.0124883920096128!GO:0019318;hexose metabolic process;0.0127113035230047!GO:0015631;tubulin binding;0.0129318006725203!GO:0001817;regulation of cytokine production;0.0135231632395171!GO:0006914;autophagy;0.0139459510098213!GO:0030663;COPI coated vesicle membrane;0.0140041309394421!GO:0030126;COPI vesicle coat;0.0140041309394421!GO:0042802;identical protein binding;0.0142031780113395!GO:0030258;lipid modification;0.014690707362094!GO:0030137;COPI-coated vesicle;0.0150415115595602!GO:0005048;signal sequence binding;0.0150562739007676!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.015564894483051!GO:0043488;regulation of mRNA stability;0.0155751732650983!GO:0043487;regulation of RNA stability;0.0155751732650983!GO:0030176;integral to endoplasmic reticulum membrane;0.0157709306929989!GO:0005815;microtubule organizing center;0.0158673814561592!GO:0008139;nuclear localization sequence binding;0.0162501711838736!GO:0008287;protein serine/threonine phosphatase complex;0.0164868764075094!GO:0030133;transport vesicle;0.0169275486618562!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.017038204463137!GO:0003702;RNA polymerase II transcription factor activity;0.0172042618704162!GO:0030384;phosphoinositide metabolic process;0.017428721116447!GO:0003725;double-stranded RNA binding;0.017428721116447!GO:0005070;SH3/SH2 adaptor activity;0.0176486434822984!GO:0005996;monosaccharide metabolic process;0.0177881744875581!GO:0030660;Golgi-associated vesicle membrane;0.0179314068209662!GO:0030218;erythrocyte differentiation;0.018039128120812!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0181755228116034!GO:0045047;protein targeting to ER;0.0181755228116034!GO:0030027;lamellipodium;0.0181755228116034!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0182754660785298!GO:0046479;glycosphingolipid catabolic process;0.018463592707818!GO:0000118;histone deacetylase complex;0.0184953222356587!GO:0030119;AP-type membrane coat adaptor complex;0.0185047373620665!GO:0017166;vinculin binding;0.0192802266231046!GO:0005905;coated pit;0.0193110046738273!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0193132454439195!GO:0043621;protein self-association;0.0193132454439195!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0193266719426362!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0193266719426362!GO:0006516;glycoprotein catabolic process;0.0193266719426362!GO:0050811;GABA receptor binding;0.0194349215530086!GO:0042613;MHC class II protein complex;0.0199458907157191!GO:0006954;inflammatory response;0.0209605015489574!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0210233059643835!GO:0016311;dephosphorylation;0.0213484963252929!GO:0032763;regulation of mast cell cytokine production;0.0215787776663348!GO:0032762;mast cell cytokine production;0.0215787776663348!GO:0008637;apoptotic mitochondrial changes;0.0217109998631065!GO:0030521;androgen receptor signaling pathway;0.0217452126786486!GO:0006665;sphingolipid metabolic process;0.0222620969537311!GO:0043300;regulation of leukocyte degranulation;0.0223458752229058!GO:0006644;phospholipid metabolic process;0.022540369524795!GO:0000209;protein polyubiquitination;0.0232562512772047!GO:0043433;negative regulation of transcription factor activity;0.023356185156589!GO:0006260;DNA replication;0.02341629456077!GO:0051056;regulation of small GTPase mediated signal transduction;0.0234549327054702!GO:0019843;rRNA binding;0.0234750210277603!GO:0000082;G1/S transition of mitotic cell cycle;0.023655164287503!GO:0006509;membrane protein ectodomain proteolysis;0.0238828535135308!GO:0033619;membrane protein proteolysis;0.0238828535135308!GO:0043022;ribosome binding;0.0240626477923141!GO:0030503;regulation of cell redox homeostasis;0.0241524730999151!GO:0008383;manganese superoxide dismutase activity;0.0241524730999151!GO:0001315;age-dependent response to reactive oxygen species;0.0241524730999151!GO:0019883;antigen processing and presentation of endogenous antigen;0.0245262730305913!GO:0001819;positive regulation of cytokine production;0.0261018617745027!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0262445538299908!GO:0045113;regulation of integrin biosynthetic process;0.026355896903334!GO:0045112;integrin biosynthetic process;0.026355896903334!GO:0051091;positive regulation of transcription factor activity;0.0266146240806502!GO:0006383;transcription from RNA polymerase III promoter;0.0268513305808747!GO:0002467;germinal center formation;0.0268987238711623!GO:0015036;disulfide oxidoreductase activity;0.0270770221630145!GO:0050851;antigen receptor-mediated signaling pathway;0.0271697572716959!GO:0002440;production of molecular mediator of immune response;0.0271697572716959!GO:0045321;leukocyte activation;0.0271697572716959!GO:0030131;clathrin adaptor complex;0.0272052412593084!GO:0046578;regulation of Ras protein signal transduction;0.0275907606169416!GO:0003711;transcription elongation regulator activity;0.0275907606169416!GO:0008017;microtubule binding;0.0278300177990238!GO:0002224;toll-like receptor signaling pathway;0.0278300177990238!GO:0002221;pattern recognition receptor signaling pathway;0.0278300177990238!GO:0006414;translational elongation;0.027921901632264!GO:0033033;negative regulation of myeloid cell apoptosis;0.027921901632264!GO:0001803;regulation of type III hypersensitivity;0.027921901632264!GO:0032733;positive regulation of interleukin-10 production;0.027921901632264!GO:0033025;regulation of mast cell apoptosis;0.027921901632264!GO:0001805;positive regulation of type III hypersensitivity;0.027921901632264!GO:0033023;mast cell homeostasis;0.027921901632264!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.027921901632264!GO:0033032;regulation of myeloid cell apoptosis;0.027921901632264!GO:0001802;type III hypersensitivity;0.027921901632264!GO:0033028;myeloid cell apoptosis;0.027921901632264!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.027921901632264!GO:0033026;negative regulation of mast cell apoptosis;0.027921901632264!GO:0033024;mast cell apoptosis;0.027921901632264!GO:0005869;dynactin complex;0.0294674248237434!GO:0008312;7S RNA binding;0.0297158834172055!GO:0044427;chromosomal part;0.0298049777861907!GO:0005788;endoplasmic reticulum lumen;0.0298900293001216!GO:0002444;myeloid leukocyte mediated immunity;0.0298900293001216!GO:0005669;transcription factor TFIID complex;0.0299931088929071!GO:0006376;mRNA splice site selection;0.0302432355815529!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0302432355815529!GO:0045576;mast cell activation;0.0303713693991201!GO:0051101;regulation of DNA binding;0.0308250257125165!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0308631595988364!GO:0008625;induction of apoptosis via death domain receptors;0.0317654204293455!GO:0015923;mannosidase activity;0.0317992691360447!GO:0045920;negative regulation of exocytosis;0.0318314586001493!GO:0043301;negative regulation of leukocyte degranulation;0.0318314586001493!GO:0043305;negative regulation of mast cell degranulation;0.0318314586001493!GO:0051049;regulation of transport;0.0320834392291833!GO:0048002;antigen processing and presentation of peptide antigen;0.032084925098702!GO:0051085;chaperone cofactor-dependent protein folding;0.0325706062135088!GO:0004218;cathepsin S activity;0.0327269152387456!GO:0031098;stress-activated protein kinase signaling pathway;0.0330754952593969!GO:0043299;leukocyte degranulation;0.0336548727249476!GO:0035035;histone acetyltransferase binding;0.0337012361406109!GO:0004702;receptor signaling protein serine/threonine kinase activity;0.0337012361406109!GO:0004402;histone acetyltransferase activity;0.0339509392803317!GO:0004468;lysine N-acetyltransferase activity;0.0339509392803317!GO:0046474;glycerophospholipid biosynthetic process;0.0341971414616253!GO:0032640;tumor necrosis factor production;0.0342774324028594!GO:0051235;maintenance of localization;0.0345336337542698!GO:0006007;glucose catabolic process;0.0345336337542698!GO:0032760;positive regulation of tumor necrosis factor production;0.0354799971074222!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0355195641998815!GO:0004563;beta-N-acetylhexosaminidase activity;0.0361515551897818!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0363758989157499!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0370514282561828!GO:0042348;NF-kappaB import into nucleus;0.0375826433308117!GO:0042345;regulation of NF-kappaB import into nucleus;0.0375826433308117!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0376534363435522!GO:0002819;regulation of adaptive immune response;0.0376534363435522!GO:0040029;regulation of gene expression, epigenetic;0.0382733927222852!GO:0006749;glutathione metabolic process;0.0383706720959788!GO:0006354;RNA elongation;0.0384908556829334!GO:0015980;energy derivation by oxidation of organic compounds;0.0385135057939761!GO:0006689;ganglioside catabolic process;0.0387733685533794!GO:0050900;leukocyte migration;0.0390447420633122!GO:0019882;antigen processing and presentation;0.0397189026979283!GO:0005791;rough endoplasmic reticulum;0.0397189026979283!GO:0051098;regulation of binding;0.0400825387744225!GO:0006405;RNA export from nucleus;0.0400825387744225!GO:0043028;caspase regulator activity;0.0401431044655439!GO:0003746;translation elongation factor activity;0.0401431044655439!GO:0046466;membrane lipid catabolic process;0.0402344796942316!GO:0005100;Rho GTPase activator activity;0.040240601250309!GO:0043506;regulation of JNK activity;0.0403081693611597!GO:0008286;insulin receptor signaling pathway;0.0403996634318236!GO:0045603;positive regulation of endothelial cell differentiation;0.0409208578480084!GO:0016505;apoptotic protease activator activity;0.0414385620404623!GO:0045309;protein phosphorylated amino acid binding;0.0419342583735388!GO:0000119;mediator complex;0.0420631668294141!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0434987123449298!GO:0006338;chromatin remodeling;0.0439164654098518!GO:0030100;regulation of endocytosis;0.0461796692404118!GO:0035258;steroid hormone receptor binding;0.047749040058064!GO:0008538;proteasome activator activity;0.0479302027341503!GO:0000339;RNA cap binding;0.0479302027341503!GO:0005684;U2-dependent spliceosome;0.0482579933121891!GO:0008154;actin polymerization and/or depolymerization;0.0484181347370679!GO:0007006;mitochondrial membrane organization and biogenesis;0.0485246225061625!GO:0030522;intracellular receptor-mediated signaling pathway;0.0488880864036081!GO:0000303;response to superoxide;0.0490253570453335!GO:0017091;AU-rich element binding;0.04912501961108!GO:0050779;RNA destabilization;0.04912501961108!GO:0000289;poly(A) tail shortening;0.04912501961108 | |||
|sample_id=11863 | |sample_id=11863 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=EP300:2.50671416967;SREBF1,2:2.48136491327;SPI1:2.45408784517;SPIB:2.39664108299;NFE2L2:2.15982073987;FOXD3:2.12517530572;ETS1,2:1.97546976068;NFE2:1.90005914148;DMAP1_NCOR{1,2}_SMARC:1.85449667384;NANOG{mouse}:1.84256636276;PAX2:1.83243528624;HMX1:1.79773256069;CEBPA,B_DDIT3:1.752360965;NR1H4:1.72607833713;ELF1,2,4:1.62461788426;BACH2:1.60772296528;FOS_FOS{B,L1}_JUN{B,D}:1.53408845124;FOXP3:1.53212543748;FOSL2:1.5271933535;FOXN1:1.48698777495;HLF:1.37501689349;RUNX1..3:1.33863382713;NFIL3:1.3210882402;NFE2L1:1.2207289177;IRF1,2:1.17005489482;TLX2:1.16652772664;PITX1..3:1.04277766025;TFCP2:1.03908707452;RXRA_VDR{dimer}:1.01887283764;FOXO1,3,4:1.00901867322;SPZ1:1.00254630869;ATF5_CREB3:0.92160070006;SMAD1..7,9:0.869370599322;BPTF:0.854203444392;ESR1:0.789000425095;IRF7:0.751792625137;PDX1:0.736487361994;TGIF1:0.732231207184;FOX{F1,F2,J1}:0.730020355782;NFKB1_REL_RELA:0.702265295767;HBP1_HMGB_SSRP1_UBTF:0.680888539964;GLI1..3:0.673262561298;HES1:0.664360043875;GATA4:0.658961349267;PPARG:0.607249418755;ATF4:0.581445019921;PAX4:0.574414416791;ZBTB16:0.529009196316;FOX{D1,D2}:0.525052012378;IKZF2:0.508087969584;MAFB:0.505611812448;NR6A1:0.503322810216;FOXP1:0.501427436493;HIF1A:0.474140723651;CREB1:0.469041615439;TOPORS:0.46507152616;HMGA1,2:0.424455162774;RFX2..5_RFXANK_RFXAP:0.375123802257;ESRRA:0.346217350821;NFIX:0.338359134275;PAX1,9:0.233405238109;ALX1:0.22010325853;CDX1,2,4:0.190836532095;RREB1:0.139470891133;RXR{A,B,G}:0.13639231174;EN1,2:0.0994595022178;PRDM1:0.0661536164981;ZNF148:0.0641415000808;STAT2,4,6:0.0515643009562;ATF6:0.0489905873825;NANOG:0.0286087440658;AIRE:0.0214251954338;ATF2:-0.00171099612849;NKX2-2,8:-0.00379778786962;NKX3-2:-0.0176729042971;MYB:-0.0357995342876;ALX4:-0.0403155623475;JUN:-0.0445440988617;NKX6-1,2:-0.100796162989;TFAP4:-0.113178793488;OCT4_SOX2{dimer}:-0.116088363421;AHR_ARNT_ARNT2:-0.163319660205;NKX3-1:-0.184585761157;ZBTB6:-0.18699062322;PATZ1:-0.203824384073;MYFfamily:-0.204590809917;MZF1:-0.268590065263;HNF4A_NR2F1,2:-0.277670601196;POU5F1:-0.279125169337;CUX2:-0.302033332196;TAL1_TCF{3,4,12}:-0.338607714229;DBP:-0.34895387442;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.380551727709;EBF1:-0.391259532569;REST:-0.426587422532;TFAP2{A,C}:-0.435934544498;FOXM1:-0.447070022857;XBP1:-0.460313066405;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.461798068301;HOX{A5,B5}:-0.471417489844;ZIC1..3:-0.518870960142;ZNF238:-0.530808412706;NHLH1,2:-0.573412899167;STAT5{A,B}:-0.583040706753;TBP:-0.585001228572;ARID5B:-0.586526650406;SRF:-0.587145064204;EVI1:-0.603417412746;EGR1..3:-0.606262131087;GATA6:-0.612403680497;MED-1{core}:-0.637000393906;PAX3,7:-0.645722885261;HNF1A:-0.656143812938;STAT1,3:-0.668301970366;UFEwm:-0.67924601845;FOXA2:-0.728816408003;POU1F1:-0.750540592072;GCM1,2:-0.756566132213;ELK1,4_GABP{A,B1}:-0.771660877694;VSX1,2:-0.777856409002;PRRX1,2:-0.794743523771;KLF4:-0.816724885313;LMO2:-0.824915033012;GTF2A1,2:-0.826204975086;MTE{core}:-0.841716724341;T:-0.844104848363;MYOD1:-0.862604106484;ZNF423:-0.863847922358;CRX:-0.864925181974;IKZF1:-0.867391844615;NFATC1..3:-0.872452656603;MEF2{A,B,C,D}:-0.880377155226;ZFP161:-0.891716875583;SP1:-0.907800360631;TFAP2B:-0.912428106271;MTF1:-0.912879886002;HSF1,2:-0.930354776638;SOX5:-0.944300634524;SOX2:-0.953046194836;GZF1:-0.990392576645;PAX5:-1.00789140823;TBX4,5:-1.01871765099;NR3C1:-1.04817303855;PAX8:-1.06085025586;TLX1..3_NFIC{dimer}:-1.06140296436;TEF:-1.06179344186;GTF2I:-1.06458782403;RFX1:-1.06896926693;POU2F1..3:-1.0707440064;TP53:-1.08033914846;POU6F1:-1.08589939456;ZEB1:-1.13558003705;YY1:-1.1414846294;FOX{I1,J2}:-1.14283508211;TFDP1:-1.15503682936;MAZ:-1.15894183218;AR:-1.17281798646;NKX2-3_NKX2-5:-1.23324737798;XCPE1{core}:-1.27570851581;ONECUT1,2:-1.28852761836;BREu{core}:-1.29051103388;HIC1:-1.30425985679;PAX6:-1.30675915096;MYBL2:-1.34317781;SNAI1..3:-1.34705273082;SOX{8,9,10}:-1.397117656;TEAD1:-1.40185947604;NR5A1,2:-1.43077440916;FOXL1:-1.43104143452;E2F1..5:-1.46577502912;ZNF384:-1.47753679867;HOX{A4,D4}:-1.50238312004;RBPJ:-1.50839407571;HAND1,2:-1.51383219132;RORA:-1.52908611207;HOX{A6,A7,B6,B7}:-1.53411854826;FOXQ1:-1.55919586904;HOXA9_MEIS1:-1.64357206776;NKX2-1,4:-1.64582094208;ADNP_IRX_SIX_ZHX:-1.76593990054;NRF1:-1.87786743805;LHX3,4:-1.90864095493;SOX17:-2.01079797026;GFI1B:-2.0438560617;ZNF143:-2.05401752178;NFY{A,B,C}:-2.11162579251;POU3F1..4:-2.1821588068;CDC5L:-2.21847190901;PBX1:-2.22285018429;bHLH_family:-2.23600220868;GFI1:-2.3163434069;LEF1_TCF7_TCF7L1,2:-2.38551759807 | |top_motifs=EP300:2.50671416967;SREBF1,2:2.48136491327;SPI1:2.45408784517;SPIB:2.39664108299;NFE2L2:2.15982073987;FOXD3:2.12517530572;ETS1,2:1.97546976068;NFE2:1.90005914148;DMAP1_NCOR{1,2}_SMARC:1.85449667384;NANOG{mouse}:1.84256636276;PAX2:1.83243528624;HMX1:1.79773256069;CEBPA,B_DDIT3:1.752360965;NR1H4:1.72607833713;ELF1,2,4:1.62461788426;BACH2:1.60772296528;FOS_FOS{B,L1}_JUN{B,D}:1.53408845124;FOXP3:1.53212543748;FOSL2:1.5271933535;FOXN1:1.48698777495;HLF:1.37501689349;RUNX1..3:1.33863382713;NFIL3:1.3210882402;NFE2L1:1.2207289177;IRF1,2:1.17005489482;TLX2:1.16652772664;PITX1..3:1.04277766025;TFCP2:1.03908707452;RXRA_VDR{dimer}:1.01887283764;FOXO1,3,4:1.00901867322;SPZ1:1.00254630869;ATF5_CREB3:0.92160070006;SMAD1..7,9:0.869370599322;BPTF:0.854203444392;ESR1:0.789000425095;IRF7:0.751792625137;PDX1:0.736487361994;TGIF1:0.732231207184;FOX{F1,F2,J1}:0.730020355782;NFKB1_REL_RELA:0.702265295767;HBP1_HMGB_SSRP1_UBTF:0.680888539964;GLI1..3:0.673262561298;HES1:0.664360043875;GATA4:0.658961349267;PPARG:0.607249418755;ATF4:0.581445019921;PAX4:0.574414416791;ZBTB16:0.529009196316;FOX{D1,D2}:0.525052012378;IKZF2:0.508087969584;MAFB:0.505611812448;NR6A1:0.503322810216;FOXP1:0.501427436493;HIF1A:0.474140723651;CREB1:0.469041615439;TOPORS:0.46507152616;HMGA1,2:0.424455162774;RFX2..5_RFXANK_RFXAP:0.375123802257;ESRRA:0.346217350821;NFIX:0.338359134275;PAX1,9:0.233405238109;ALX1:0.22010325853;CDX1,2,4:0.190836532095;RREB1:0.139470891133;RXR{A,B,G}:0.13639231174;EN1,2:0.0994595022178;PRDM1:0.0661536164981;ZNF148:0.0641415000808;STAT2,4,6:0.0515643009562;ATF6:0.0489905873825;NANOG:0.0286087440658;AIRE:0.0214251954338;ATF2:-0.00171099612849;NKX2-2,8:-0.00379778786962;NKX3-2:-0.0176729042971;MYB:-0.0357995342876;ALX4:-0.0403155623475;JUN:-0.0445440988617;NKX6-1,2:-0.100796162989;TFAP4:-0.113178793488;OCT4_SOX2{dimer}:-0.116088363421;AHR_ARNT_ARNT2:-0.163319660205;NKX3-1:-0.184585761157;ZBTB6:-0.18699062322;PATZ1:-0.203824384073;MYFfamily:-0.204590809917;MZF1:-0.268590065263;HNF4A_NR2F1,2:-0.277670601196;POU5F1:-0.279125169337;CUX2:-0.302033332196;TAL1_TCF{3,4,12}:-0.338607714229;DBP:-0.34895387442;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.380551727709;EBF1:-0.391259532569;REST:-0.426587422532;TFAP2{A,C}:-0.435934544498;FOXM1:-0.447070022857;XBP1:-0.460313066405;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.461798068301;HOX{A5,B5}:-0.471417489844;ZIC1..3:-0.518870960142;ZNF238:-0.530808412706;NHLH1,2:-0.573412899167;STAT5{A,B}:-0.583040706753;TBP:-0.585001228572;ARID5B:-0.586526650406;SRF:-0.587145064204;EVI1:-0.603417412746;EGR1..3:-0.606262131087;GATA6:-0.612403680497;MED-1{core}:-0.637000393906;PAX3,7:-0.645722885261;HNF1A:-0.656143812938;STAT1,3:-0.668301970366;UFEwm:-0.67924601845;FOXA2:-0.728816408003;POU1F1:-0.750540592072;GCM1,2:-0.756566132213;ELK1,4_GABP{A,B1}:-0.771660877694;VSX1,2:-0.777856409002;PRRX1,2:-0.794743523771;KLF4:-0.816724885313;LMO2:-0.824915033012;GTF2A1,2:-0.826204975086;MTE{core}:-0.841716724341;T:-0.844104848363;MYOD1:-0.862604106484;ZNF423:-0.863847922358;CRX:-0.864925181974;IKZF1:-0.867391844615;NFATC1..3:-0.872452656603;MEF2{A,B,C,D}:-0.880377155226;ZFP161:-0.891716875583;SP1:-0.907800360631;TFAP2B:-0.912428106271;MTF1:-0.912879886002;HSF1,2:-0.930354776638;SOX5:-0.944300634524;SOX2:-0.953046194836;GZF1:-0.990392576645;PAX5:-1.00789140823;TBX4,5:-1.01871765099;NR3C1:-1.04817303855;PAX8:-1.06085025586;TLX1..3_NFIC{dimer}:-1.06140296436;TEF:-1.06179344186;GTF2I:-1.06458782403;RFX1:-1.06896926693;POU2F1..3:-1.0707440064;TP53:-1.08033914846;POU6F1:-1.08589939456;ZEB1:-1.13558003705;YY1:-1.1414846294;FOX{I1,J2}:-1.14283508211;TFDP1:-1.15503682936;MAZ:-1.15894183218;AR:-1.17281798646;NKX2-3_NKX2-5:-1.23324737798;XCPE1{core}:-1.27570851581;ONECUT1,2:-1.28852761836;BREu{core}:-1.29051103388;HIC1:-1.30425985679;PAX6:-1.30675915096;MYBL2:-1.34317781;SNAI1..3:-1.34705273082;SOX{8,9,10}:-1.397117656;TEAD1:-1.40185947604;NR5A1,2:-1.43077440916;FOXL1:-1.43104143452;E2F1..5:-1.46577502912;ZNF384:-1.47753679867;HOX{A4,D4}:-1.50238312004;RBPJ:-1.50839407571;HAND1,2:-1.51383219132;RORA:-1.52908611207;HOX{A6,A7,B6,B7}:-1.53411854826;FOXQ1:-1.55919586904;HOXA9_MEIS1:-1.64357206776;NKX2-1,4:-1.64582094208;ADNP_IRX_SIX_ZHX:-1.76593990054;NRF1:-1.87786743805;LHX3,4:-1.90864095493;SOX17:-2.01079797026;GFI1B:-2.0438560617;ZNF143:-2.05401752178;NFY{A,B,C}:-2.11162579251;POU3F1..4:-2.1821588068;CDC5L:-2.21847190901;PBX1:-2.22285018429;bHLH_family:-2.23600220868;GFI1:-2.3163434069;LEF1_TCF7_TCF7L1,2:-2.38551759807 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11863-125A9;search_select_hide=table117:FF:11863-125A9 | |||
}} | }} | ||
Latest revision as of 18:24, 4 June 2020
| Name: | CD14+ monocytes - mock treated, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13468 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13468
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13468
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.109 |
| 10 | 10 | 0.0192 |
| 100 | 100 | 0.753 |
| 101 | 101 | 0.6 |
| 102 | 102 | 0.47 |
| 103 | 103 | 0.24 |
| 104 | 104 | 0.679 |
| 105 | 105 | 0.392 |
| 106 | 106 | 0.00132 |
| 107 | 107 | 0.147 |
| 108 | 108 | 0.899 |
| 109 | 109 | 0.173 |
| 11 | 11 | 0.128 |
| 110 | 110 | 0.299 |
| 111 | 111 | 0.0273 |
| 112 | 112 | 0.22 |
| 113 | 113 | 0.57 |
| 114 | 114 | 0.0125 |
| 115 | 115 | 0.381 |
| 116 | 116 | 0.629 |
| 117 | 117 | 0.0283 |
| 118 | 118 | 0.184 |
| 119 | 119 | 0.132 |
| 12 | 12 | 0.429 |
| 120 | 120 | 0.888 |
| 121 | 121 | 0.703 |
| 122 | 122 | 0.814 |
| 123 | 123 | 0.0154 |
| 124 | 124 | 0.599 |
| 125 | 125 | 0.395 |
| 126 | 126 | 0.281 |
| 127 | 127 | 0.233 |
| 128 | 128 | 0.0194 |
| 129 | 129 | 0.518 |
| 13 | 13 | 0.2 |
| 130 | 130 | 0.123 |
| 131 | 131 | 0.666 |
| 132 | 132 | 0.144 |
| 133 | 133 | 0.992 |
| 134 | 134 | 0.521 |
| 135 | 135 | 0.337 |
| 136 | 136 | 0.996 |
| 137 | 137 | 0.0047 |
| 138 | 138 | 0.139 |
| 139 | 139 | 0.0248 |
| 14 | 14 | 0.383 |
| 140 | 140 | 0.0913 |
| 141 | 141 | 0.436 |
| 142 | 142 | 0.901 |
| 143 | 143 | 0.0339 |
| 144 | 144 | 0.772 |
| 145 | 145 | 0.353 |
| 146 | 146 | 0.47 |
| 147 | 147 | 0.327 |
| 148 | 148 | 0.018 |
| 149 | 149 | 0.499 |
| 15 | 15 | 0.13 |
| 150 | 150 | 0.468 |
| 151 | 151 | 0.284 |
| 152 | 152 | 0.0856 |
| 153 | 153 | 0.309 |
| 154 | 154 | 0.468 |
| 155 | 155 | 0.283 |
| 156 | 156 | 0.791 |
| 157 | 157 | 0.37 |
| 158 | 158 | 0.114 |
| 159 | 159 | 0.932 |
| 16 | 16 | 0.312 |
| 160 | 160 | 0.45 |
| 161 | 161 | 0.686 |
| 162 | 162 | 0.576 |
| 163 | 163 | 0.531 |
| 164 | 164 | 0.0991 |
| 165 | 165 | 0.139 |
| 166 | 166 | 0.472 |
| 167 | 167 | 0.214 |
| 168 | 168 | 0.562 |
| 169 | 169 | 0.0075 |
| 17 | 17 | 0.167 |
| 18 | 18 | 0.184 |
| 19 | 19 | 0.196 |
| 2 | 2 | 0.862 |
| 20 | 20 | 0.391 |
| 21 | 21 | 0.204 |
| 22 | 22 | 0.185 |
| 23 | 23 | 0.0768 |
| 24 | 24 | 0.27 |
| 25 | 25 | 0.38 |
| 26 | 26 | 0.0232 |
| 27 | 27 | 0.748 |
| 28 | 28 | 0.465 |
| 29 | 29 | 0.246 |
| 3 | 3 | 0.0463 |
| 30 | 30 | 0.568 |
| 31 | 31 | 0.67 |
| 32 | 32 | 0.761 |
| 33 | 33 | 0.483 |
| 34 | 34 | 0.345 |
| 35 | 35 | 0.141 |
| 36 | 36 | 0.196 |
| 37 | 37 | 0.0699 |
| 38 | 38 | 0.316 |
| 39 | 39 | 0.661 |
| 4 | 4 | 0.923 |
| 40 | 40 | 0.184 |
| 41 | 41 | 0.0238 |
| 42 | 42 | 0.351 |
| 43 | 43 | 0.0481 |
| 44 | 44 | 0.691 |
| 45 | 45 | 0.713 |
| 46 | 46 | 0.0978 |
| 47 | 47 | 0.389 |
| 48 | 48 | 0.334 |
| 49 | 49 | 0.101 |
| 5 | 5 | 0.203 |
| 50 | 50 | 0.926 |
| 51 | 51 | 0.312 |
| 52 | 52 | 0.317 |
| 53 | 53 | 0.223 |
| 54 | 54 | 0.255 |
| 55 | 55 | 0.291 |
| 56 | 56 | 0.599 |
| 57 | 57 | 0.68 |
| 58 | 58 | 0.101 |
| 59 | 59 | 0.114 |
| 6 | 6 | 0.515 |
| 60 | 60 | 0.0443 |
| 61 | 61 | 0.391 |
| 62 | 62 | 0.0369 |
| 63 | 63 | 0.38 |
| 64 | 64 | 0.414 |
| 65 | 65 | 0.209 |
| 66 | 66 | 0.239 |
| 67 | 67 | 0.59 |
| 68 | 68 | 0.892 |
| 69 | 69 | 0.734 |
| 7 | 7 | 0.309 |
| 70 | 70 | 0.0107 |
| 71 | 71 | 0.0298 |
| 72 | 72 | 0.252 |
| 73 | 73 | 0.0806 |
| 74 | 74 | 0.0922 |
| 75 | 75 | 0.0598 |
| 76 | 76 | 0.259 |
| 77 | 77 | 0.319 |
| 78 | 78 | 0.0906 |
| 79 | 79 | 0.0398 |
| 8 | 8 | 0.258 |
| 80 | 80 | 0.328 |
| 81 | 81 | 0.324 |
| 82 | 82 | 0.0751 |
| 83 | 83 | 0.483 |
| 84 | 84 | 0.532 |
| 85 | 85 | 0.0122 |
| 86 | 86 | 0.0516 |
| 87 | 87 | 0.436 |
| 88 | 88 | 0.449 |
| 89 | 89 | 0.311 |
| 9 | 9 | 0.347 |
| 90 | 90 | 0.0538 |
| 91 | 91 | 0.316 |
| 92 | 92 | 0.158 |
| 93 | 93 | 0.429 |
| 94 | 94 | 0.0288 |
| 95 | 95 | 0.256 |
| 96 | 96 | 0.327 |
| 97 | 97 | 0.975 |
| 98 | 98 | 0.149 |
| 99 | 99 | 0.185 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13468
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011101 human CD14-positive monocytes - mock treated sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000343 (control treatment sample)
0000350 (experimentally modified sample)
0011101 (human CD14-positive monocytes - mock treated sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)
