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{{f5samples
{{f5samples
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|fonse_treatment_closure=FF:0000625,FF:0000632,FF:0011106,FF:11874-125C2
|fonse_treatment_closure=FF:0000625,FF:0000632,FF:0011106,FF:11874-125C2
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Group%2520A%2520streptococci%252c%2520donor2.CNhs13532.11874-125C2.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Group%2520A%2520streptococci%252c%2520donor2.CNhs13532.11874-125C2.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Group%2520A%2520streptococci%252c%2520donor2.CNhs13532.11874-125C2.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Group%2520A%2520streptococci%252c%2520donor2.CNhs13532.11874-125C2.hg38.nobarcode.ctss.bed.gz
|id=FF:11874-125C2
|id=FF:11874-125C2
|is_a=EFO:0002091;;FF:0000002;;FF:0000210;;FF:0011106
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|library_id=CNhs13532
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|microRNAs=
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11874
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11874
|name=CD14+ monocytes - treated with Group A streptococci, donor2
|name=CD14+ monocytes - treated with Group A streptococci, donor2
|namespace=
|namespace=
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|rna_box=125
|rna_box=125
|rna_catalog_number=
|rna_catalog_number=
Line 57: Line 79:
|rna_weight_ug=1.481715
|rna_weight_ug=1.481715
|sample_age=51
|sample_age=51
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_line=
Line 69: Line 92:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.02305990964884e-281!GO:0005737;cytoplasm;6.68865552850883e-123!GO:0043227;membrane-bound organelle;1.75247151527798e-111!GO:0043231;intracellular membrane-bound organelle;3.75660015591485e-111!GO:0043226;organelle;4.49151797207148e-102!GO:0043229;intracellular organelle;2.56249070625004e-101!GO:0044444;cytoplasmic part;9.71681299821384e-79!GO:0005515;protein binding;9.25319366696584e-72!GO:0044422;organelle part;3.1231204927884e-65!GO:0044446;intracellular organelle part;9.44607432600509e-64!GO:0044237;cellular metabolic process;9.15562017522092e-62!GO:0044238;primary metabolic process;2.36979644478515e-61!GO:0032991;macromolecular complex;2.62854751928349e-58!GO:0043170;macromolecule metabolic process;2.9011147248796e-58!GO:0003723;RNA binding;6.85900617784769e-57!GO:0030529;ribonucleoprotein complex;1.74631505522148e-50!GO:0044428;nuclear part;3.25612003700952e-46!GO:0005634;nucleus;6.34346167678721e-46!GO:0019538;protein metabolic process;2.79626650168862e-45!GO:0006412;translation;8.04512009448591e-42!GO:0033036;macromolecule localization;8.04512009448591e-42!GO:0044267;cellular protein metabolic process;9.74162498801203e-42!GO:0044260;cellular macromolecule metabolic process;4.37470058236945e-41!GO:0045184;establishment of protein localization;4.4152870376684e-41!GO:0015031;protein transport;4.72096022042451e-41!GO:0008104;protein localization;6.25983731992019e-39!GO:0043233;organelle lumen;1.1881081247889e-36!GO:0031974;membrane-enclosed lumen;1.1881081247889e-36!GO:0005829;cytosol;2.06624291955092e-35!GO:0006915;apoptosis;1.16721596561364e-34!GO:0012501;programmed cell death;1.75927861831519e-34!GO:0008219;cell death;8.8305883924367e-33!GO:0016265;death;8.8305883924367e-33!GO:0016071;mRNA metabolic process;5.96064948942666e-32!GO:0010467;gene expression;1.15547276458786e-31!GO:0043283;biopolymer metabolic process;1.88668415278009e-31!GO:0009059;macromolecule biosynthetic process;6.98165875715578e-31!GO:0031090;organelle membrane;8.11434616118629e-31!GO:0006396;RNA processing;1.02387546665259e-30!GO:0044249;cellular biosynthetic process;2.15111229448246e-30!GO:0009058;biosynthetic process;6.85188652685813e-30!GO:0043234;protein complex;1.14379691146288e-29!GO:0031981;nuclear lumen;6.07177292640291e-29!GO:0016043;cellular component organization and biogenesis;2.02241852900599e-28!GO:0046907;intracellular transport;3.37351056714523e-28!GO:0008380;RNA splicing;3.6910973679251e-28!GO:0006886;intracellular protein transport;8.29401316824605e-28!GO:0006397;mRNA processing;2.41994496620475e-27!GO:0005840;ribosome;3.14828633718587e-26!GO:0042981;regulation of apoptosis;2.60254831374863e-24!GO:0005739;mitochondrion;3.74749114786248e-24!GO:0003735;structural constituent of ribosome;8.24020967443886e-24!GO:0043067;regulation of programmed cell death;8.24020967443886e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.54897660010084e-23!GO:0031967;organelle envelope;3.47593446225764e-23!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.76083419213392e-23!GO:0031975;envelope;6.28665862236858e-23!GO:0033279;ribosomal subunit;6.79968880334462e-23!GO:0051649;establishment of cellular localization;2.8544965998788e-22!GO:0044445;cytosolic part;5.96662781247092e-22!GO:0051641;cellular localization;1.28284716088808e-21!GO:0000166;nucleotide binding;2.67348951722906e-21!GO:0065003;macromolecular complex assembly;5.16305528134749e-21!GO:0005681;spliceosome;5.16305528134749e-21!GO:0002376;immune system process;6.00996095506623e-21!GO:0008134;transcription factor binding;1.123321986681e-20!GO:0005654;nucleoplasm;2.19771856813812e-20!GO:0007243;protein kinase cascade;2.56808428487028e-19!GO:0044429;mitochondrial part;8.50296261973004e-18!GO:0048523;negative regulation of cellular process;1.25667928956144e-17!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.29030624126799e-17!GO:0016192;vesicle-mediated transport;1.34330623208033e-17!GO:0022607;cellular component assembly;1.8496930993e-17!GO:0048770;pigment granule;4.13867367513105e-17!GO:0042470;melanosome;4.13867367513105e-17!GO:0006955;immune response;4.13867367513105e-17!GO:0017111;nucleoside-triphosphatase activity;4.79469492871533e-17!GO:0044451;nucleoplasm part;6.40763886156424e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.78062759581914e-17!GO:0016462;pyrophosphatase activity;6.99592963470936e-17!GO:0007242;intracellular signaling cascade;7.5143072615783e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;8.02726066632985e-17!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.12145128378204e-16!GO:0006512;ubiquitin cycle;4.23909651002397e-16!GO:0048519;negative regulation of biological process;4.26992963302846e-16!GO:0044265;cellular macromolecule catabolic process;4.56811238712983e-16!GO:0032553;ribonucleotide binding;6.70899915558932e-16!GO:0032555;purine ribonucleotide binding;6.70899915558932e-16!GO:0006119;oxidative phosphorylation;8.77205219431435e-16!GO:0043412;biopolymer modification;3.67961971518149e-15!GO:0022618;protein-RNA complex assembly;4.12568158946579e-15!GO:0017076;purine nucleotide binding;4.12568158946579e-15!GO:0043285;biopolymer catabolic process;8.31524436362565e-15!GO:0050794;regulation of cellular process;8.31524436362565e-15!GO:0005773;vacuole;1.0082862729691e-14!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.59915814881031e-14!GO:0006605;protein targeting;2.72243089900201e-14!GO:0043069;negative regulation of programmed cell death;2.77646729200671e-14!GO:0043066;negative regulation of apoptosis;2.89561440630251e-14!GO:0006464;protein modification process;3.11299113042565e-14!GO:0043687;post-translational protein modification;3.8922839142441e-14!GO:0005740;mitochondrial envelope;4.31441216359222e-14!GO:0003676;nucleic acid binding;5.28186179610888e-14!GO:0019941;modification-dependent protein catabolic process;6.04238414347755e-14!GO:0043632;modification-dependent macromolecule catabolic process;6.04238414347755e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;7.98845951700251e-14!GO:0044257;cellular protein catabolic process;8.30086576329807e-14!GO:0065009;regulation of a molecular function;1.03539200168264e-13!GO:0031966;mitochondrial membrane;1.03539200168264e-13!GO:0051246;regulation of protein metabolic process;1.16407363402806e-13!GO:0006511;ubiquitin-dependent protein catabolic process;1.29169214250241e-13!GO:0006950;response to stress;1.38360824430401e-13!GO:0016604;nuclear body;1.54783376568297e-13!GO:0019866;organelle inner membrane;2.26633267148036e-13!GO:0006913;nucleocytoplasmic transport;2.26633267148036e-13!GO:0009057;macromolecule catabolic process;4.10335387196712e-13!GO:0003712;transcription cofactor activity;4.18256020365568e-13!GO:0016070;RNA metabolic process;4.28733128816768e-13!GO:0051169;nuclear transport;4.50004731424991e-13!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.96209016736968e-13!GO:0048522;positive regulation of cellular process;6.78339236455687e-13!GO:0000323;lytic vacuole;6.80357670180531e-13!GO:0005764;lysosome;6.80357670180531e-13!GO:0009615;response to virus;7.99247037886107e-13!GO:0016874;ligase activity;1.08883373460567e-12!GO:0005768;endosome;1.13396638243241e-12!GO:0006996;organelle organization and biogenesis;1.15859024274003e-12!GO:0008135;translation factor activity, nucleic acid binding;2.28627431518074e-12!GO:0044248;cellular catabolic process;2.49303061949003e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.43713259939157e-12!GO:0050789;regulation of biological process;3.61077878668556e-12!GO:0016607;nuclear speck;3.62953128077183e-12!GO:0006916;anti-apoptosis;3.73279992868634e-12!GO:0015934;large ribosomal subunit;4.89719164902378e-12!GO:0048518;positive regulation of biological process;5.4135804894875e-12!GO:0030163;protein catabolic process;6.74488038471497e-12!GO:0015935;small ribosomal subunit;7.07815853939537e-12!GO:0005794;Golgi apparatus;9.09027652223484e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.63447997435759e-12!GO:0000502;proteasome complex (sensu Eukaryota);1.20164736876714e-11!GO:0006793;phosphorus metabolic process;1.26784965291899e-11!GO:0006796;phosphate metabolic process;1.26784965291899e-11!GO:0012505;endomembrane system;1.54551679916952e-11!GO:0006366;transcription from RNA polymerase II promoter;1.82863767456658e-11!GO:0006457;protein folding;2.11241678517688e-11!GO:0065007;biological regulation;2.5565307879604e-11!GO:0003743;translation initiation factor activity;6.91764968381253e-11!GO:0005743;mitochondrial inner membrane;7.25741217940935e-11!GO:0006417;regulation of translation;8.28381156707383e-11!GO:0005524;ATP binding;1.13401463969171e-10!GO:0006413;translational initiation;1.24611087141678e-10!GO:0009607;response to biotic stimulus;1.44540419698329e-10!GO:0006259;DNA metabolic process;1.53283392358068e-10!GO:0032559;adenyl ribonucleotide binding;1.58927422392996e-10!GO:0016310;phosphorylation;2.11880216569677e-10!GO:0043065;positive regulation of apoptosis;2.18258955356404e-10!GO:0009967;positive regulation of signal transduction;3.77460102283279e-10!GO:0050790;regulation of catalytic activity;3.83066638015583e-10!GO:0043068;positive regulation of programmed cell death;3.98817890949821e-10!GO:0044455;mitochondrial membrane part;4.22206545720027e-10!GO:0016787;hydrolase activity;4.89924920776438e-10!GO:0006446;regulation of translational initiation;5.29764236384087e-10!GO:0009889;regulation of biosynthetic process;5.84713943316956e-10!GO:0030554;adenyl nucleotide binding;8.05597933158222e-10!GO:0031324;negative regulation of cellular metabolic process;9.56655712221103e-10!GO:0051186;cofactor metabolic process;9.69872203155724e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.54440402337479e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;1.6720775196638e-09!GO:0000375;RNA splicing, via transesterification reactions;1.6720775196638e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.6720775196638e-09!GO:0005635;nuclear envelope;2.11264092623632e-09!GO:0031326;regulation of cellular biosynthetic process;2.59836744993439e-09!GO:0048468;cell development;2.74000613091254e-09!GO:0019829;cation-transporting ATPase activity;3.02020572968449e-09!GO:0051082;unfolded protein binding;3.2511095560026e-09!GO:0005730;nucleolus;3.39777559647343e-09!GO:0006732;coenzyme metabolic process;3.93927543458201e-09!GO:0008639;small protein conjugating enzyme activity;5.05991734279135e-09!GO:0005770;late endosome;5.55027698397296e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.4515870636666e-09!GO:0005783;endoplasmic reticulum;6.67352975980022e-09!GO:0004842;ubiquitin-protein ligase activity;7.8083641504146e-09!GO:0017038;protein import;7.8083641504146e-09!GO:0015986;ATP synthesis coupled proton transport;8.02631589823433e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.02631589823433e-09!GO:0019787;small conjugating protein ligase activity;8.668795100968e-09!GO:0016887;ATPase activity;8.92857493415304e-09!GO:0048193;Golgi vesicle transport;1.18156663946414e-08!GO:0003924;GTPase activity;1.303984501422e-08!GO:0042623;ATPase activity, coupled;1.49678014699984e-08!GO:0051170;nuclear import;1.71379857377893e-08!GO:0006917;induction of apoptosis;1.88792022205912e-08!GO:0016564;transcription repressor activity;2.02433892972809e-08!GO:0006164;purine nucleotide biosynthetic process;2.05941620903533e-08!GO:0006163;purine nucleotide metabolic process;2.44975764374569e-08!GO:0009152;purine ribonucleotide biosynthetic process;2.46166566377283e-08!GO:0005746;mitochondrial respiratory chain;2.51045936715663e-08!GO:0009892;negative regulation of metabolic process;3.00466077355984e-08!GO:0009150;purine ribonucleotide metabolic process;3.19025736417713e-08!GO:0012502;induction of programmed cell death;3.27335694345022e-08!GO:0005525;GTP binding;3.30034131202312e-08!GO:0006606;protein import into nucleus;3.91935487183392e-08!GO:0019899;enzyme binding;4.04081862749408e-08!GO:0009056;catabolic process;4.19531914755461e-08!GO:0031965;nuclear membrane;4.57215842406696e-08!GO:0003713;transcription coactivator activity;4.80508492660289e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.54695538994334e-08!GO:0009259;ribonucleotide metabolic process;5.61705341729586e-08!GO:0007264;small GTPase mediated signal transduction;6.12215229601181e-08!GO:0051726;regulation of cell cycle;6.56718039488622e-08!GO:0005774;vacuolar membrane;6.8758649113462e-08!GO:0007049;cell cycle;7.96954738544317e-08!GO:0000074;regulation of progression through cell cycle;8.01092394828456e-08!GO:0006754;ATP biosynthetic process;9.04506550441401e-08!GO:0006753;nucleoside phosphate metabolic process;9.04506550441401e-08!GO:0009260;ribonucleotide biosynthetic process;9.32247409624133e-08!GO:0050136;NADH dehydrogenase (quinone) activity;9.87283931831023e-08!GO:0003954;NADH dehydrogenase activity;9.87283931831023e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.87283931831023e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.12840323835442e-07!GO:0008047;enzyme activator activity;1.12840323835442e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.21406204431973e-07!GO:0009966;regulation of signal transduction;1.28018494135766e-07!GO:0044453;nuclear membrane part;1.40871711590473e-07!GO:0045321;leukocyte activation;1.64649484491915e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.85787386298018e-07!GO:0006461;protein complex assembly;2.53748627739925e-07!GO:0016881;acid-amino acid ligase activity;2.58385080070187e-07!GO:0045786;negative regulation of progression through cell cycle;3.26263428352316e-07!GO:0019222;regulation of metabolic process;3.64925043523272e-07!GO:0009108;coenzyme biosynthetic process;3.69449032373511e-07!GO:0044437;vacuolar part;3.71192587402755e-07!GO:0015078;hydrogen ion transmembrane transporter activity;3.71316009842575e-07!GO:0016481;negative regulation of transcription;4.15839040182652e-07!GO:0051188;cofactor biosynthetic process;4.24187650729365e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.40121414820204e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.40121414820204e-07!GO:0009142;nucleoside triphosphate biosynthetic process;5.10250758809676e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.10250758809676e-07!GO:0008565;protein transporter activity;5.20927890763567e-07!GO:0046034;ATP metabolic process;6.20024351359308e-07!GO:0009055;electron carrier activity;6.20156735890581e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.19684286099559e-07!GO:0042775;organelle ATP synthesis coupled electron transport;8.84171594132567e-07!GO:0042773;ATP synthesis coupled electron transport;8.84171594132567e-07!GO:0001816;cytokine production;9.20947351472032e-07!GO:0044440;endosomal part;9.20947351472032e-07!GO:0010008;endosome membrane;9.20947351472032e-07!GO:0032561;guanyl ribonucleotide binding;9.20947351472032e-07!GO:0019001;guanyl nucleotide binding;9.20947351472032e-07!GO:0005765;lysosomal membrane;1.01742238830757e-06!GO:0008026;ATP-dependent helicase activity;1.03273511654118e-06!GO:0050657;nucleic acid transport;1.24326150417864e-06!GO:0051236;establishment of RNA localization;1.24326150417864e-06!GO:0050658;RNA transport;1.24326150417864e-06!GO:0006752;group transfer coenzyme metabolic process;1.26299108988792e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.36788174633171e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.36788174633171e-06!GO:0016044;membrane organization and biogenesis;1.38951154482379e-06!GO:0016563;transcription activator activity;1.39137954427074e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.50728503008951e-06!GO:0030964;NADH dehydrogenase complex (quinone);1.62774188517158e-06!GO:0045271;respiratory chain complex I;1.62774188517158e-06!GO:0005747;mitochondrial respiratory chain complex I;1.62774188517158e-06!GO:0004386;helicase activity;1.67075009478074e-06!GO:0006403;RNA localization;1.74385142522306e-06!GO:0031982;vesicle;1.79953586377143e-06!GO:0044432;endoplasmic reticulum part;1.83597426878946e-06!GO:0043228;non-membrane-bound organelle;2.32508391189568e-06!GO:0043232;intracellular non-membrane-bound organelle;2.32508391189568e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.36451818203575e-06!GO:0006954;inflammatory response;3.04477754477858e-06!GO:0051707;response to other organism;3.20987800044869e-06!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.21766314120046e-06!GO:0016197;endosome transport;3.60825612046427e-06!GO:0009141;nucleoside triphosphate metabolic process;3.76224255391977e-06!GO:0030097;hemopoiesis;4.29617647868209e-06!GO:0046649;lymphocyte activation;4.34152313488811e-06!GO:0006952;defense response;4.70611908670575e-06!GO:0030099;myeloid cell differentiation;4.9531916230933e-06!GO:0005643;nuclear pore;5.00419542084481e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.16933211129166e-06!GO:0006974;response to DNA damage stimulus;5.30901172930992e-06!GO:0003714;transcription corepressor activity;5.72478491681958e-06!GO:0032446;protein modification by small protein conjugation;6.46187026500775e-06!GO:0001775;cell activation;7.57717928516645e-06!GO:0005793;ER-Golgi intermediate compartment;8.25659507850431e-06!GO:0030695;GTPase regulator activity;8.64948632686429e-06!GO:0016568;chromatin modification;1.01764774072895e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.02003338065051e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.02898537551865e-05!GO:0031252;leading edge;1.0448039884812e-05!GO:0031988;membrane-bound vesicle;1.09235996329735e-05!GO:0016567;protein ubiquitination;1.10651171210004e-05!GO:0051338;regulation of transferase activity;1.11450461639505e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.2069405100937e-05!GO:0015399;primary active transmembrane transporter activity;1.2069405100937e-05!GO:0031410;cytoplasmic vesicle;1.20805724206651e-05!GO:0043566;structure-specific DNA binding;1.27674427568009e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.28909676856988e-05!GO:0031980;mitochondrial lumen;1.29097837941739e-05!GO:0005759;mitochondrial matrix;1.29097837941739e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.31969310358897e-05!GO:0008632;apoptotic program;1.42746444080662e-05!GO:0051028;mRNA transport;1.50572554048798e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;1.84451587180517e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.17443597994434e-05!GO:0009893;positive regulation of metabolic process;2.55161551502026e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.59600760815819e-05!GO:0043549;regulation of kinase activity;2.6313274242881e-05!GO:0006401;RNA catabolic process;2.80963578082367e-05!GO:0005789;endoplasmic reticulum membrane;2.88306420720983e-05!GO:0002521;leukocyte differentiation;3.16534722830998e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.22574710982616e-05!GO:0005096;GTPase activator activity;3.34052931564831e-05!GO:0031323;regulation of cellular metabolic process;3.53014847164947e-05!GO:0003724;RNA helicase activity;3.63562669437885e-05!GO:0003697;single-stranded DNA binding;3.70825352203493e-05!GO:0006897;endocytosis;4.02212123533056e-05!GO:0010324;membrane invagination;4.02212123533056e-05!GO:0051336;regulation of hydrolase activity;4.02212123533056e-05!GO:0016023;cytoplasmic membrane-bound vesicle;4.12458793547874e-05!GO:0005769;early endosome;4.14032629533286e-05!GO:0006281;DNA repair;4.22833441565297e-05!GO:0030120;vesicle coat;4.2456533021315e-05!GO:0030662;coated vesicle membrane;4.2456533021315e-05!GO:0045859;regulation of protein kinase activity;4.30952832059714e-05!GO:0006323;DNA packaging;4.34387981953603e-05!GO:0046930;pore complex;5.06399322892663e-05!GO:0051789;response to protein stimulus;5.21443978919902e-05!GO:0006986;response to unfolded protein;5.21443978919902e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.29777324197833e-05!GO:0031902;late endosome membrane;5.38388293516385e-05!GO:0004298;threonine endopeptidase activity;5.60131272971618e-05!GO:0022402;cell cycle process;5.91376157794603e-05!GO:0048475;coated membrane;6.9274225330495e-05!GO:0030117;membrane coat;6.9274225330495e-05!GO:0042110;T cell activation;7.43945644663152e-05!GO:0002520;immune system development;8.31816265897429e-05!GO:0046822;regulation of nucleocytoplasmic transport;9.5319879950146e-05!GO:0046519;sphingoid metabolic process;0.0001148054571969!GO:0007050;cell cycle arrest;0.00011494082279378!GO:0065002;intracellular protein transport across a membrane;0.000115308379633126!GO:0006613;cotranslational protein targeting to membrane;0.000116262145742243!GO:0022415;viral reproductive process;0.000126182851126127!GO:0043085;positive regulation of catalytic activity;0.000126867978369448!GO:0046983;protein dimerization activity;0.00012864580257199!GO:0005057;receptor signaling protein activity;0.000136324147783789!GO:0048534;hemopoietic or lymphoid organ development;0.000141409773400296!GO:0045259;proton-transporting ATP synthase complex;0.000148669361642938!GO:0042254;ribosome biogenesis and assembly;0.000149407127055012!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000153222069333273!GO:0006402;mRNA catabolic process;0.000155815517659062!GO:0043492;ATPase activity, coupled to movement of substances;0.000158555063884025!GO:0051223;regulation of protein transport;0.000163169932737843!GO:0051168;nuclear export;0.000170858480532073!GO:0030532;small nuclear ribonucleoprotein complex;0.00017212517807513!GO:0032940;secretion by cell;0.000183171808484789!GO:0001726;ruffle;0.000186551600622788!GO:0006672;ceramide metabolic process;0.000187914054928413!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000194102686689768!GO:0016740;transferase activity;0.000196515133427681!GO:0005083;small GTPase regulator activity;0.000199786808776294!GO:0022890;inorganic cation transmembrane transporter activity;0.000201752555109415!GO:0000245;spliceosome assembly;0.000201752555109415!GO:0009060;aerobic respiration;0.00021099040703049!GO:0006919;caspase activation;0.000224223807290358!GO:0008234;cysteine-type peptidase activity;0.00022620911702906!GO:0002757;immune response-activating signal transduction;0.000233422564179382!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00024284406104227!GO:0006818;hydrogen transport;0.000280165360338552!GO:0007265;Ras protein signal transduction;0.000291624945512076!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000293926596728226!GO:0009611;response to wounding;0.000296540396732643!GO:0004674;protein serine/threonine kinase activity;0.000300323846657739!GO:0031325;positive regulation of cellular metabolic process;0.000345982135136511!GO:0009117;nucleotide metabolic process;0.000348306336822531!GO:0005885;Arp2/3 protein complex;0.000358722802757735!GO:0043280;positive regulation of caspase activity;0.000363050572002126!GO:0015992;proton transport;0.000369195686570001!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000390294097566201!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000392013777027853!GO:0051427;hormone receptor binding;0.000392136647578705!GO:0045892;negative regulation of transcription, DNA-dependent;0.000395626985919055!GO:0045637;regulation of myeloid cell differentiation;0.000403369370759425!GO:0060090;molecular adaptor activity;0.000404445302962716!GO:0001817;regulation of cytokine production;0.000425730166441223!GO:0043281;regulation of caspase activity;0.000427932366757485!GO:0007005;mitochondrion organization and biogenesis;0.000427932366757485!GO:0002764;immune response-regulating signal transduction;0.000441305318799899!GO:0005798;Golgi-associated vesicle;0.000444643411657456!GO:0051090;regulation of transcription factor activity;0.00044921849466586!GO:0007034;vacuolar transport;0.000452813340390852!GO:0030036;actin cytoskeleton organization and biogenesis;0.000469598528893903!GO:0007041;lysosomal transport;0.000477205354153435!GO:0008186;RNA-dependent ATPase activity;0.000478944571957141!GO:0045333;cellular respiration;0.000500524824501772!GO:0044431;Golgi apparatus part;0.000528866373666413!GO:0035257;nuclear hormone receptor binding;0.000614503808773756!GO:0033157;regulation of intracellular protein transport;0.000626796101353022!GO:0042306;regulation of protein import into nucleus;0.000626796101353022!GO:0051276;chromosome organization and biogenesis;0.000659631777613636!GO:0010468;regulation of gene expression;0.00069633825759965!GO:0002274;myeloid leukocyte activation;0.000718751892215075!GO:0045941;positive regulation of transcription;0.000742593364901887!GO:0006643;membrane lipid metabolic process;0.000761927233379159!GO:0002252;immune effector process;0.000768501618419351!GO:0001819;positive regulation of cytokine production;0.000777433610620898!GO:0008654;phospholipid biosynthetic process;0.00079222221379949!GO:0007040;lysosome organization and biogenesis;0.000824554557068008!GO:0045893;positive regulation of transcription, DNA-dependent;0.000824554557068008!GO:0009719;response to endogenous stimulus;0.000881283623638848!GO:0005761;mitochondrial ribosome;0.00094837732686637!GO:0000313;organellar ribosome;0.00094837732686637!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00105425853960695!GO:0006612;protein targeting to membrane;0.00110219444713038!GO:0042802;identical protein binding;0.00113332774497665!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00119107540882025!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00126427492260214!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0012957620363425!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00132775350812194!GO:0004004;ATP-dependent RNA helicase activity;0.0013631852005294!GO:0018193;peptidyl-amino acid modification;0.00152502873313592!GO:0007033;vacuole organization and biogenesis;0.00152584040003126!GO:0003729;mRNA binding;0.00153874595952255!GO:0016779;nucleotidyltransferase activity;0.00166503038845832!GO:0005637;nuclear inner membrane;0.00170957404324451!GO:0016301;kinase activity;0.00170957404324451!GO:0002250;adaptive immune response;0.00177963099334637!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.00177963099334637!GO:0042990;regulation of transcription factor import into nucleus;0.00181079901232093!GO:0042991;transcription factor import into nucleus;0.00181079901232093!GO:0005667;transcription factor complex;0.00181117015967225!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00190183962429735!GO:0051023;regulation of immunoglobulin secretion;0.00191095426622495!GO:0045994;positive regulation of translational initiation by iron;0.00191095426622495!GO:0000151;ubiquitin ligase complex;0.00204297742091026!GO:0016251;general RNA polymerase II transcription factor activity;0.00205069240517656!GO:0009165;nucleotide biosynthetic process;0.00210766722106793!GO:0030149;sphingolipid catabolic process;0.00213826129885719!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00226569956315526!GO:0004812;aminoacyl-tRNA ligase activity;0.00226569956315526!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00226569956315526!GO:0031072;heat shock protein binding;0.00265502286645868!GO:0007259;JAK-STAT cascade;0.00283588373901281!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00291189601838906!GO:0043433;negative regulation of transcription factor activity;0.00303485862668731!GO:0019904;protein domain specific binding;0.00308865611278917!GO:0043038;amino acid activation;0.00319108818774869!GO:0006418;tRNA aminoacylation for protein translation;0.00319108818774869!GO:0043039;tRNA aminoacylation;0.00319108818774869!GO:0042108;positive regulation of cytokine biosynthetic process;0.00322109338247313!GO:0033116;ER-Golgi intermediate compartment membrane;0.00324964380795716!GO:0030029;actin filament-based process;0.00333329744491639!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00354367637247103!GO:0016072;rRNA metabolic process;0.00368315303591474!GO:0005070;SH3/SH2 adaptor activity;0.00372898591325539!GO:0043623;cellular protein complex assembly;0.0037632681293558!GO:0002573;myeloid leukocyte differentiation;0.0037632681293558!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0037933717716103!GO:0051247;positive regulation of protein metabolic process;0.00381226123389889!GO:0051059;NF-kappaB binding;0.00386513842798791!GO:0051345;positive regulation of hydrolase activity;0.00387662807573914!GO:0019058;viral infectious cycle;0.00396582603190732!GO:0006399;tRNA metabolic process;0.00396582603190732!GO:0005741;mitochondrial outer membrane;0.00397551044546284!GO:0019220;regulation of phosphate metabolic process;0.00413866427553457!GO:0051174;regulation of phosphorus metabolic process;0.00413866427553457!GO:0006364;rRNA processing;0.00420492303992235!GO:0005099;Ras GTPase activator activity;0.00424374142233087!GO:0003690;double-stranded DNA binding;0.00424374142233087!GO:0065004;protein-DNA complex assembly;0.00424865967327793!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00430085520343659!GO:0050900;leukocyte migration;0.00433648751058179!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00435366395486454!GO:0004197;cysteine-type endopeptidase activity;0.00443324389058806!GO:0042221;response to chemical stimulus;0.00449723927933841!GO:0050851;antigen receptor-mediated signaling pathway;0.00456302917102276!GO:0031901;early endosome membrane;0.00462659171270823!GO:0030218;erythrocyte differentiation;0.00485037052588199!GO:0006099;tricarboxylic acid cycle;0.00487015184138037!GO:0046356;acetyl-CoA catabolic process;0.00487015184138037!GO:0019079;viral genome replication;0.00495520079388292!GO:0003725;double-stranded RNA binding;0.00495520079388292!GO:0051187;cofactor catabolic process;0.00496586300341535!GO:0002443;leukocyte mediated immunity;0.00515534094407972!GO:0006350;transcription;0.0052194151303411!GO:0002697;regulation of immune effector process;0.00524531966727199!GO:0006891;intra-Golgi vesicle-mediated transport;0.00532059358850901!GO:0045454;cell redox homeostasis;0.00533912756654373!GO:0002684;positive regulation of immune system process;0.00559168425475562!GO:0046966;thyroid hormone receptor binding;0.005831589720816!GO:0043021;ribonucleoprotein binding;0.00585975055394634!GO:0005813;centrosome;0.00588252662586472!GO:0003702;RNA polymerase II transcription factor activity;0.00593552296459458!GO:0042107;cytokine metabolic process;0.00617922450758211!GO:0032386;regulation of intracellular transport;0.00626573979938929!GO:0033673;negative regulation of kinase activity;0.0064794556029865!GO:0006469;negative regulation of protein kinase activity;0.0064794556029865!GO:0006607;NLS-bearing substrate import into nucleus;0.00651794713621894!GO:0008383;manganese superoxide dismutase activity;0.00652421669587319!GO:0001315;age-dependent response to reactive oxygen species;0.00652421669587319!GO:0019377;glycolipid catabolic process;0.00652646781902951!GO:0045045;secretory pathway;0.00661918911555606!GO:0016363;nuclear matrix;0.0066600454874101!GO:0042613;MHC class II protein complex;0.00666724234426234!GO:0051092;activation of NF-kappaB transcription factor;0.00668429080995214!GO:0006468;protein amino acid phosphorylation;0.00714178482518934!GO:0048487;beta-tubulin binding;0.00719354083789152!GO:0006665;sphingolipid metabolic process;0.00734714519268074!GO:0009891;positive regulation of biosynthetic process;0.00734714519268074!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00745812224358473!GO:0050778;positive regulation of immune response;0.00750184685716566!GO:0042113;B cell activation;0.00754490669163034!GO:0002682;regulation of immune system process;0.00790549459272758!GO:0051348;negative regulation of transferase activity;0.00804827041850826!GO:0019882;antigen processing and presentation;0.0082119589320495!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00828346485106984!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00828346485106984!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00828346485106984!GO:0000139;Golgi membrane;0.00828346485106984!GO:0000165;MAPKKK cascade;0.00836380693336117!GO:0005484;SNAP receptor activity;0.00836675160141682!GO:0006611;protein export from nucleus;0.00836710160224849!GO:0051098;regulation of binding;0.00846397296353349!GO:0000082;G1/S transition of mitotic cell cycle;0.00866211188272669!GO:0045646;regulation of erythrocyte differentiation;0.00881680275632461!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.00900856528361853!GO:0002819;regulation of adaptive immune response;0.00900856528361853!GO:0043087;regulation of GTPase activity;0.00936710881848436!GO:0030134;ER to Golgi transport vesicle;0.00938507892166199!GO:0005048;signal sequence binding;0.00938507892166199!GO:0019867;outer membrane;0.00962499551898926!GO:0033549;MAP kinase phosphatase activity;0.00982489878457859!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.00982489878457859!GO:0046467;membrane lipid biosynthetic process;0.00982489878457859!GO:0030127;COPII vesicle coat;0.00985461595048511!GO:0012507;ER to Golgi transport vesicle membrane;0.00985461595048511!GO:0002237;response to molecule of bacterial origin;0.00991731977297055!GO:0002440;production of molecular mediator of immune response;0.00991822952387472!GO:0042089;cytokine biosynthetic process;0.0100541497390889!GO:0031968;organelle outer membrane;0.0100909618569691!GO:0044262;cellular carbohydrate metabolic process;0.0101553720644164!GO:0048872;homeostasis of number of cells;0.0103556181069461!GO:0033367;protein localization in mast cell secretory granule;0.0103556181069461!GO:0033365;protein localization in organelle;0.0103556181069461!GO:0033371;T cell secretory granule organization and biogenesis;0.0103556181069461!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0103556181069461!GO:0033375;protease localization in T cell secretory granule;0.0103556181069461!GO:0042629;mast cell granule;0.0103556181069461!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0103556181069461!GO:0033364;mast cell secretory granule organization and biogenesis;0.0103556181069461!GO:0033380;granzyme B localization in T cell secretory granule;0.0103556181069461!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0103556181069461!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0103556181069461!GO:0033368;protease localization in mast cell secretory granule;0.0103556181069461!GO:0033366;protein localization in secretory granule;0.0103556181069461!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0103556181069461!GO:0033374;protein localization in T cell secretory granule;0.0103556181069461!GO:0004185;serine carboxypeptidase activity;0.0103760089279316!GO:0032943;mononuclear cell proliferation;0.0109751103933581!GO:0046651;lymphocyte proliferation;0.0109751103933581!GO:0006935;chemotaxis;0.011338468567675!GO:0042330;taxis;0.011338468567675!GO:0045727;positive regulation of translation;0.0115159310796387!GO:0009109;coenzyme catabolic process;0.0116072668919789!GO:0046479;glycosphingolipid catabolic process;0.0116950038411204!GO:0030658;transport vesicle membrane;0.0116950038411204!GO:0030098;lymphocyte differentiation;0.0117398781716301!GO:0051049;regulation of transport;0.0117725484319675!GO:0006084;acetyl-CoA metabolic process;0.0117725484319675!GO:0051251;positive regulation of lymphocyte activation;0.0117980492390763!GO:0006333;chromatin assembly or disassembly;0.0118590776800962!GO:0048471;perinuclear region of cytoplasm;0.0122453471415498!GO:0006352;transcription initiation;0.0127030100663291!GO:0004860;protein kinase inhibitor activity;0.0128461796509335!GO:0045639;positive regulation of myeloid cell differentiation;0.0128638216591035!GO:0005152;interleukin-1 receptor antagonist activity;0.0128638216591035!GO:0030353;fibroblast growth factor receptor antagonist activity;0.0128638216591035!GO:0042035;regulation of cytokine biosynthetic process;0.0131780174060506!GO:0030217;T cell differentiation;0.0131780174060506!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0136676118495113!GO:0002444;myeloid leukocyte mediated immunity;0.0137459938189114!GO:0043621;protein self-association;0.0143873751918067!GO:0005815;microtubule organizing center;0.0144549831553975!GO:0000209;protein polyubiquitination;0.0146141764946649!GO:0048500;signal recognition particle;0.0147536824569751!GO:0008139;nuclear localization sequence binding;0.0152482244187031!GO:0042325;regulation of phosphorylation;0.0153002380706083!GO:0019210;kinase inhibitor activity;0.015465199231947!GO:0031625;ubiquitin protein ligase binding;0.0157874082021104!GO:0016791;phosphoric monoester hydrolase activity;0.0157874082021104!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0161321469806153!GO:0006458;'de novo' protein folding;0.0164730096346478!GO:0051084;'de novo' posttranslational protein folding;0.0164730096346478!GO:0050776;regulation of immune response;0.016674220042331!GO:0030503;regulation of cell redox homeostasis;0.0171103763145842!GO:0051091;positive regulation of transcription factor activity;0.0175531645969259!GO:0007165;signal transduction;0.0176950417742417!GO:0030176;integral to endoplasmic reticulum membrane;0.0180835656386014!GO:0002699;positive regulation of immune effector process;0.0181971310020706!GO:0051347;positive regulation of transferase activity;0.0185419679270438!GO:0006091;generation of precursor metabolites and energy;0.0189128982521705!GO:0048146;positive regulation of fibroblast proliferation;0.0191388021120274!GO:0045576;mast cell activation;0.0191566129019079!GO:0002263;cell activation during immune response;0.0191566129019079!GO:0042093;T-helper cell differentiation;0.0191566129019079!GO:0002366;leukocyte activation during immune response;0.0191566129019079!GO:0002293;alpha-beta T cell differentiation during immune response;0.0191566129019079!GO:0002294;CD4-positive, alpha-beta T cell differentiation during immune response;0.0191566129019079!GO:0002285;lymphocyte activation during immune response;0.0191566129019079!GO:0002292;T cell differentiation during immune response;0.0191566129019079!GO:0002286;T cell activation during immune response;0.0191566129019079!GO:0008624;induction of apoptosis by extracellular signals;0.0197100198767713!GO:0006650;glycerophospholipid metabolic process;0.0199076687025718!GO:0008283;cell proliferation;0.0200554889218109!GO:0046466;membrane lipid catabolic process;0.0201212723381833!GO:0001776;leukocyte homeostasis;0.0202837412043006!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0203992534227587!GO:0008333;endosome to lysosome transport;0.0205780975122401!GO:0008286;insulin receptor signaling pathway;0.0206248242870164!GO:0030521;androgen receptor signaling pathway;0.0206364410733345!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0207928630507346!GO:0045047;protein targeting to ER;0.0207928630507346!GO:0051051;negative regulation of transport;0.0209146073267511!GO:0051050;positive regulation of transport;0.0209666791116943!GO:0000339;RNA cap binding;0.0211995632433941!GO:0051252;regulation of RNA metabolic process;0.021268989298574!GO:0002824;positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0212901782667412!GO:0002821;positive regulation of adaptive immune response;0.0212901782667412!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0213752103208767!GO:0042611;MHC protein complex;0.0213790068000988!GO:0017091;AU-rich element binding;0.0219890904319464!GO:0050779;RNA destabilization;0.0219890904319464!GO:0000289;poly(A) tail shortening;0.0219890904319464!GO:0043300;regulation of leukocyte degranulation;0.0220688922247255!GO:0042348;NF-kappaB import into nucleus;0.0221602960253937!GO:0042345;regulation of NF-kappaB import into nucleus;0.0221602960253937!GO:0030663;COPI coated vesicle membrane;0.0221602960253937!GO:0030126;COPI vesicle coat;0.0221602960253937!GO:0032763;regulation of mast cell cytokine production;0.0221602960253937!GO:0032762;mast cell cytokine production;0.0221602960253937!GO:0030258;lipid modification;0.0221602960253937!GO:0008637;apoptotic mitochondrial changes;0.0224419493146692!GO:0000287;magnesium ion binding;0.0227248948381887!GO:0030041;actin filament polymerization;0.0227327764556283!GO:0048144;fibroblast proliferation;0.0229062926352969!GO:0048145;regulation of fibroblast proliferation;0.0229062926352969!GO:0015923;mannosidase activity;0.0232545476619392!GO:0043022;ribosome binding;0.0235895694808772!GO:0006749;glutathione metabolic process;0.0238960422831656!GO:0046631;alpha-beta T cell activation;0.0240652501782743!GO:0035035;histone acetyltransferase binding;0.0247422509936988!GO:0006414;translational elongation;0.0250800027561466!GO:0006354;RNA elongation;0.0251433013249138!GO:0030100;regulation of endocytosis;0.0252702113138431!GO:0030660;Golgi-associated vesicle membrane;0.0253610752894568!GO:0042088;T-helper 1 type immune response;0.0258139783142311!GO:0050811;GABA receptor binding;0.0259215588892216!GO:0030377;U-plasminogen activator receptor activity;0.0260357847951964!GO:0030027;lamellipodium;0.0262450980108002!GO:0050865;regulation of cell activation;0.0263469600339282!GO:0030133;transport vesicle;0.0267802881990732!GO:0030384;phosphoinositide metabolic process;0.0270054445209424!GO:0045746;negative regulation of Notch signaling pathway;0.0271109427186159!GO:0042092;T-helper 2 type immune response;0.0271157074041426!GO:0002449;lymphocyte mediated immunity;0.0272244764701669!GO:0045089;positive regulation of innate immune response;0.0272286882810254!GO:0045088;regulation of innate immune response;0.0272286882810254!GO:0050870;positive regulation of T cell activation;0.0273522246900242!GO:0030518;steroid hormone receptor signaling pathway;0.0273584328121414!GO:0019371;cyclooxygenase pathway;0.0280313011749077!GO:0030137;COPI-coated vesicle;0.0280313011749077!GO:0031327;negative regulation of cellular biosynthetic process;0.0281895512242745!GO:0002467;germinal center formation;0.0285779442543328!GO:0051101;regulation of DNA binding;0.0286285833581043!GO:0009890;negative regulation of biosynthetic process;0.0286374373840424!GO:0043299;leukocyte degranulation;0.0290278230919058!GO:0030155;regulation of cell adhesion;0.029339306961036!GO:0009306;protein secretion;0.0294888855022923!GO:0001562;response to protozoan;0.0297750789179973!GO:0005149;interleukin-1 receptor binding;0.0299749383733314!GO:0006644;phospholipid metabolic process;0.0302158059241507!GO:0019901;protein kinase binding;0.0304737144838427!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.030940672244649!GO:0017166;vinculin binding;0.0309892256927819!GO:0006984;ER-nuclear signaling pathway;0.0310250065994158!GO:0051235;maintenance of localization;0.0310825749596272!GO:0051052;regulation of DNA metabolic process;0.031740919679146!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0317605106359961!GO:0030595;leukocyte chemotaxis;0.0319186390659626!GO:0008312;7S RNA binding;0.0325441278801402!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0325441278801402!GO:0045792;negative regulation of cell size;0.0325891339647363!GO:0019843;rRNA binding;0.0327929295288496!GO:0002224;toll-like receptor signaling pathway;0.0327929295288496!GO:0002221;pattern recognition receptor signaling pathway;0.0327929295288496!GO:0003727;single-stranded RNA binding;0.0328329079224824!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0328838036147702!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.03345223169914!GO:0044255;cellular lipid metabolic process;0.0334649919821342!GO:0003746;translation elongation factor activity;0.0337244963373662!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0338798620969461!GO:0001516;prostaglandin biosynthetic process;0.0338798620969461!GO:0046457;prostanoid biosynthetic process;0.0338798620969461!GO:0002718;regulation of cytokine production during immune response;0.0339301792457878!GO:0002367;cytokine production during immune response;0.0339301792457878!GO:0002700;regulation of production of molecular mediator of immune response;0.0339301792457878!GO:0042832;defense response to protozoan;0.0345639560124198!GO:0043488;regulation of mRNA stability;0.0345639560124198!GO:0043487;regulation of RNA stability;0.0345639560124198!GO:0032760;positive regulation of tumor necrosis factor production;0.0345639560124198!GO:0015631;tubulin binding;0.0353104338855578!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0356084936963928!GO:0004177;aminopeptidase activity;0.0358141396833852!GO:0005905;coated pit;0.0360013157833381!GO:0008361;regulation of cell size;0.0360592121096839!GO:0051249;regulation of lymphocyte activation;0.0361358305835873!GO:0042098;T cell proliferation;0.036840294547905!GO:0042992;negative regulation of transcription factor import into nucleus;0.036840294547905!GO:0042308;negative regulation of protein import into nucleus;0.036840294547905!GO:0030867;rough endoplasmic reticulum membrane;0.036867670328306!GO:0033674;positive regulation of kinase activity;0.0374533421293293!GO:0000785;chromatin;0.0374833489665449!GO:0000738;DNA catabolic process, exonucleolytic;0.0376207045172375!GO:0006376;mRNA splice site selection;0.0378369796201106!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0378369796201106!GO:0006516;glycoprotein catabolic process;0.0378588442987721!GO:0000049;tRNA binding;0.0379484576712087!GO:0031328;positive regulation of cellular biosynthetic process;0.0379484576712087!GO:0030308;negative regulation of cell growth;0.0385691637391437!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0390596409333454!GO:0019752;carboxylic acid metabolic process;0.0393323476722539!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0393323476722539!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0393323476722539!GO:0002705;positive regulation of leukocyte mediated immunity;0.0395360834881908!GO:0002708;positive regulation of lymphocyte mediated immunity;0.0395360834881908!GO:0050727;regulation of inflammatory response;0.0398918552853007!GO:0031347;regulation of defense response;0.0398918552853007!GO:0015036;disulfide oxidoreductase activity;0.0399897921665249!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0400764694574791!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0400764694574791!GO:0051085;chaperone cofactor-dependent protein folding;0.0400764694574791!GO:0006260;DNA replication;0.0408411778491267!GO:0006689;ganglioside catabolic process;0.0410985088793528!GO:0019883;antigen processing and presentation of endogenous antigen;0.0411741747014362!GO:0019783;small conjugating protein-specific protease activity;0.0412557283470322!GO:0051329;interphase of mitotic cell cycle;0.0417056605153819!GO:0008629;induction of apoptosis by intracellular signals;0.0417056605153819!GO:0045603;positive regulation of endothelial cell differentiation;0.0418196496968463!GO:0030031;cell projection biogenesis;0.0424563104306943!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0435544609133003!GO:0030118;clathrin coat;0.0436142014695503!GO:0006465;signal peptide processing;0.0436142014695503!GO:0005869;dynactin complex;0.0436975726353213!GO:0043304;regulation of mast cell degranulation;0.0437725217498942!GO:0005350;pyrimidine transmembrane transporter activity;0.0445228626512924!GO:0015855;pyrimidine transport;0.0445228626512924!GO:0015288;porin activity;0.0445228626512924!GO:0048002;antigen processing and presentation of peptide antigen;0.0448006415293681!GO:0045936;negative regulation of phosphate metabolic process;0.0448868384230045!GO:0008538;proteasome activator activity;0.0453099713355204!GO:0016311;dephosphorylation;0.0457644939132401!GO:0019318;hexose metabolic process;0.0463814253196095!GO:0042347;negative regulation of NF-kappaB import into nucleus;0.0463814253196095!GO:0050792;regulation of viral reproduction;0.0465036391293927!GO:0033033;negative regulation of myeloid cell apoptosis;0.0465036391293927!GO:0001803;regulation of type III hypersensitivity;0.0465036391293927!GO:0032733;positive regulation of interleukin-10 production;0.0465036391293927!GO:0033025;regulation of mast cell apoptosis;0.0465036391293927!GO:0001805;positive regulation of type III hypersensitivity;0.0465036391293927!GO:0033023;mast cell homeostasis;0.0465036391293927!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0465036391293927!GO:0033032;regulation of myeloid cell apoptosis;0.0465036391293927!GO:0001802;type III hypersensitivity;0.0465036391293927!GO:0033028;myeloid cell apoptosis;0.0465036391293927!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0465036391293927!GO:0033026;negative regulation of mast cell apoptosis;0.0465036391293927!GO:0033024;mast cell apoptosis;0.0465036391293927!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0465036391293927!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0465036391293927!GO:0009126;purine nucleoside monophosphate metabolic process;0.0465036391293927!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0465036391293927!GO:0019955;cytokine binding;0.0467298964428309!GO:0000278;mitotic cell cycle;0.047195736011729!GO:0032507;maintenance of cellular protein localization;0.0472501432939486!GO:0043407;negative regulation of MAP kinase activity;0.0473786349711717!GO:0006082;organic acid metabolic process;0.0474256218720192!GO:0046632;alpha-beta T cell differentiation;0.0481527969293907!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0483263992668462!GO:0032318;regulation of Ras GTPase activity;0.0483823901251157!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0495044288338125!GO:0003711;transcription elongation regulator activity;0.0495786312617239!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0497052112201519
|sample_id=11874
|sample_id=11874
|sample_note=
|sample_note=
Line 76: Line 100:
|sample_tissue=
|sample_tissue=
|top_motifs=FOSL2:6.31506769825;FOS_FOS{B,L1}_JUN{B,D}:6.23671228828;BACH2:6.03785764514;HLF:6.03256806669;NFE2:5.98013821252;NFE2L2:5.18704263302;CEBPA,B_DDIT3:5.15980523859;NFIL3:4.87889487941;IRF7:4.53589225287;PAX2:4.52180646781;NFKB1_REL_RELA:4.43667352622;FOXP3:4.21227461613;IRF1,2:4.00902434751;SPIB:3.87414304882;NANOG{mouse}:3.6657934836;SREBF1,2:3.60895037227;NFATC1..3:3.5950497125;STAT5{A,B}:3.43353684335;PAX8:3.39392702689;DMAP1_NCOR{1,2}_SMARC:3.36027184783;HSF1,2:3.35043292005;SPI1:3.32701258979;ATF5_CREB3:3.27534841003;ETS1,2:3.18767955196;NR1H4:3.15703611906;JUN:3.07876525552;NFE2L1:2.92270937996;RUNX1..3:2.91483007501;ATF6:2.90024935751;ATF4:2.83531406022;CREB1:2.64421007818;ATF2:2.63534023;MAFB:2.5555259732;PAX3,7:2.41559440896;HOX{A5,B5}:1.85281450224;FOXN1:1.75669671792;STAT2,4,6:1.7123703874;TGIF1:1.68542136838;XBP1:1.65352515581;HMGA1,2:1.41564337087;HOXA9_MEIS1:1.326183772;FOXO1,3,4:1.28841265734;ELF1,2,4:1.24728842449;IKZF1:1.0170509353;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.94818976141;ALX4:0.855805972052;PDX1:0.842239589452;PRDM1:0.7275939955;RXRA_VDR{dimer}:0.718746659506;EP300:0.679544487717;CDX1,2,4:0.663029893149;NANOG:0.645187423905;NR3C1:0.641343113312;PPARG:0.504931396943;SMAD1..7,9:0.498103401154;RORA:0.494634744302;GLI1..3:0.456714925806;PAX1,9:0.426279418951;SRF:0.421601943509;HMX1:0.389911467517;HIF1A:0.362097414237;TBP:0.271724469351;OCT4_SOX2{dimer}:0.210898072977;ESR1:0.132971227589;SOX2:0.0924936443119;VSX1,2:0.0750792642253;POU2F1..3:0.0443477111343;BPTF:0.0400568641508;RBPJ:-0.0268723809789;EN1,2:-0.0412342637543;MEF2{A,B,C,D}:-0.106359124917;POU5F1:-0.151128854249;AHR_ARNT_ARNT2:-0.158604352014;POU3F1..4:-0.162688790424;EGR1..3:-0.204767932943;ZBTB16:-0.220039042405;HBP1_HMGB_SSRP1_UBTF:-0.332379566432;TLX2:-0.365064880641;STAT1,3:-0.369194791006;HES1:-0.462467161686;GATA4:-0.524155177544;FOXM1:-0.561263367277;IKZF2:-0.579146308754;PAX4:-0.625331948077;FOX{D1,D2}:-0.630094122328;MYB:-0.636714699845;RFX2..5_RFXANK_RFXAP:-0.648708143855;SPZ1:-0.712300493575;TFCP2:-0.738095057206;NFIX:-0.787536747546;DBP:-0.823742167552;NHLH1,2:-0.912400097489;MZF1:-0.931909419237;NR6A1:-1.03369935956;PRRX1,2:-1.05646865228;NKX2-1,4:-1.08507254384;FOXD3:-1.14289510963;TBX4,5:-1.19817261268;PITX1..3:-1.1982002629;MED-1{core}:-1.20195893991;ESRRA:-1.27927258424;PAX6:-1.28513020115;MYFfamily:-1.3000191974;TAL1_TCF{3,4,12}:-1.31940014821;CRX:-1.32027635951;HNF1A:-1.33229826601;MTE{core}:-1.36263901891;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.40676387154;NKX2-3_NKX2-5:-1.40834971605;SOX5:-1.41425436595;ZNF238:-1.44886234836;T:-1.45329180286;GCM1,2:-1.46455822991;TEF:-1.46813941758;ALX1:-1.48469776899;ADNP_IRX_SIX_ZHX:-1.48498369066;HOX{A4,D4}:-1.48584108283;HNF4A_NR2F1,2:-1.49631790153;TFDP1:-1.53823011647;FOX{F1,F2,J1}:-1.54381023137;TFAP4:-1.54784755784;REST:-1.5728431315;GZF1:-1.57590878273;NKX3-1:-1.59317234129;GTF2A1,2:-1.6245653357;GATA6:-1.65203874858;CUX2:-1.6577985666;E2F1..5:-1.6663811766;ZFP161:-1.67984794431;TEAD1:-1.70503597758;ZNF384:-1.70566951155;FOXL1:-1.74154465072;ZBTB6:-1.78012242227;BREu{core}:-1.80076099703;NKX3-2:-1.80928389318;NKX2-2,8:-1.88690576979;PATZ1:-1.89424085566;RXR{A,B,G}:-1.89630664438;GTF2I:-1.95844827041;TFAP2B:-1.99413177207;FOXA2:-2.0171133776;TP53:-2.02813353286;MYBL2:-2.03848130661;SP1:-2.07391243882;POU1F1:-2.125847067;RFX1:-2.13901092596;SOX{8,9,10}:-2.13986434489;MTF1:-2.15499117195;POU6F1:-2.15749549817;CDC5L:-2.22973660008;GFI1B:-2.26577310217;ELK1,4_GABP{A,B1}:-2.26897887925;MAZ:-2.28755325312;TLX1..3_NFIC{dimer}:-2.30628037244;NKX6-1,2:-2.33140169985;FOX{I1,J2}:-2.40790272813;FOXP1:-2.42230823433;HIC1:-2.46712411382;SOX17:-2.47024469362;ARID5B:-2.49065019152;ZEB1:-2.49476378101;TFAP2{A,C}:-2.51197049418;SNAI1..3:-2.5526882499;ZNF148:-2.57820821175;RREB1:-2.60431292381;PBX1:-2.63849352645;ZIC1..3:-2.70281707969;KLF4:-2.72583348567;ONECUT1,2:-2.73350362153;NFY{A,B,C}:-2.7624205791;EVI1:-2.81373853684;bHLH_family:-2.83103077846;XCPE1{core}:-2.88096386273;HOX{A6,A7,B6,B7}:-2.89209315476;NR5A1,2:-3.00693624655;EBF1:-3.05326888635;AIRE:-3.07460756047;GFI1:-3.1715865748;UFEwm:-3.19972867824;NRF1:-3.29657946488;LMO2:-3.30396251301;MYOD1:-3.33344467894;AR:-3.33827528279;ZNF423:-3.44311928295;LHX3,4:-3.48103200873;PAX5:-3.52837143127;LEF1_TCF7_TCF7L1,2:-3.72721375392;HAND1,2:-3.80077881271;FOXQ1:-3.80780873307;YY1:-3.92075328151;ZNF143:-4.15136634084;TOPORS:-5.41544898734
|top_motifs=FOSL2:6.31506769825;FOS_FOS{B,L1}_JUN{B,D}:6.23671228828;BACH2:6.03785764514;HLF:6.03256806669;NFE2:5.98013821252;NFE2L2:5.18704263302;CEBPA,B_DDIT3:5.15980523859;NFIL3:4.87889487941;IRF7:4.53589225287;PAX2:4.52180646781;NFKB1_REL_RELA:4.43667352622;FOXP3:4.21227461613;IRF1,2:4.00902434751;SPIB:3.87414304882;NANOG{mouse}:3.6657934836;SREBF1,2:3.60895037227;NFATC1..3:3.5950497125;STAT5{A,B}:3.43353684335;PAX8:3.39392702689;DMAP1_NCOR{1,2}_SMARC:3.36027184783;HSF1,2:3.35043292005;SPI1:3.32701258979;ATF5_CREB3:3.27534841003;ETS1,2:3.18767955196;NR1H4:3.15703611906;JUN:3.07876525552;NFE2L1:2.92270937996;RUNX1..3:2.91483007501;ATF6:2.90024935751;ATF4:2.83531406022;CREB1:2.64421007818;ATF2:2.63534023;MAFB:2.5555259732;PAX3,7:2.41559440896;HOX{A5,B5}:1.85281450224;FOXN1:1.75669671792;STAT2,4,6:1.7123703874;TGIF1:1.68542136838;XBP1:1.65352515581;HMGA1,2:1.41564337087;HOXA9_MEIS1:1.326183772;FOXO1,3,4:1.28841265734;ELF1,2,4:1.24728842449;IKZF1:1.0170509353;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.94818976141;ALX4:0.855805972052;PDX1:0.842239589452;PRDM1:0.7275939955;RXRA_VDR{dimer}:0.718746659506;EP300:0.679544487717;CDX1,2,4:0.663029893149;NANOG:0.645187423905;NR3C1:0.641343113312;PPARG:0.504931396943;SMAD1..7,9:0.498103401154;RORA:0.494634744302;GLI1..3:0.456714925806;PAX1,9:0.426279418951;SRF:0.421601943509;HMX1:0.389911467517;HIF1A:0.362097414237;TBP:0.271724469351;OCT4_SOX2{dimer}:0.210898072977;ESR1:0.132971227589;SOX2:0.0924936443119;VSX1,2:0.0750792642253;POU2F1..3:0.0443477111343;BPTF:0.0400568641508;RBPJ:-0.0268723809789;EN1,2:-0.0412342637543;MEF2{A,B,C,D}:-0.106359124917;POU5F1:-0.151128854249;AHR_ARNT_ARNT2:-0.158604352014;POU3F1..4:-0.162688790424;EGR1..3:-0.204767932943;ZBTB16:-0.220039042405;HBP1_HMGB_SSRP1_UBTF:-0.332379566432;TLX2:-0.365064880641;STAT1,3:-0.369194791006;HES1:-0.462467161686;GATA4:-0.524155177544;FOXM1:-0.561263367277;IKZF2:-0.579146308754;PAX4:-0.625331948077;FOX{D1,D2}:-0.630094122328;MYB:-0.636714699845;RFX2..5_RFXANK_RFXAP:-0.648708143855;SPZ1:-0.712300493575;TFCP2:-0.738095057206;NFIX:-0.787536747546;DBP:-0.823742167552;NHLH1,2:-0.912400097489;MZF1:-0.931909419237;NR6A1:-1.03369935956;PRRX1,2:-1.05646865228;NKX2-1,4:-1.08507254384;FOXD3:-1.14289510963;TBX4,5:-1.19817261268;PITX1..3:-1.1982002629;MED-1{core}:-1.20195893991;ESRRA:-1.27927258424;PAX6:-1.28513020115;MYFfamily:-1.3000191974;TAL1_TCF{3,4,12}:-1.31940014821;CRX:-1.32027635951;HNF1A:-1.33229826601;MTE{core}:-1.36263901891;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.40676387154;NKX2-3_NKX2-5:-1.40834971605;SOX5:-1.41425436595;ZNF238:-1.44886234836;T:-1.45329180286;GCM1,2:-1.46455822991;TEF:-1.46813941758;ALX1:-1.48469776899;ADNP_IRX_SIX_ZHX:-1.48498369066;HOX{A4,D4}:-1.48584108283;HNF4A_NR2F1,2:-1.49631790153;TFDP1:-1.53823011647;FOX{F1,F2,J1}:-1.54381023137;TFAP4:-1.54784755784;REST:-1.5728431315;GZF1:-1.57590878273;NKX3-1:-1.59317234129;GTF2A1,2:-1.6245653357;GATA6:-1.65203874858;CUX2:-1.6577985666;E2F1..5:-1.6663811766;ZFP161:-1.67984794431;TEAD1:-1.70503597758;ZNF384:-1.70566951155;FOXL1:-1.74154465072;ZBTB6:-1.78012242227;BREu{core}:-1.80076099703;NKX3-2:-1.80928389318;NKX2-2,8:-1.88690576979;PATZ1:-1.89424085566;RXR{A,B,G}:-1.89630664438;GTF2I:-1.95844827041;TFAP2B:-1.99413177207;FOXA2:-2.0171133776;TP53:-2.02813353286;MYBL2:-2.03848130661;SP1:-2.07391243882;POU1F1:-2.125847067;RFX1:-2.13901092596;SOX{8,9,10}:-2.13986434489;MTF1:-2.15499117195;POU6F1:-2.15749549817;CDC5L:-2.22973660008;GFI1B:-2.26577310217;ELK1,4_GABP{A,B1}:-2.26897887925;MAZ:-2.28755325312;TLX1..3_NFIC{dimer}:-2.30628037244;NKX6-1,2:-2.33140169985;FOX{I1,J2}:-2.40790272813;FOXP1:-2.42230823433;HIC1:-2.46712411382;SOX17:-2.47024469362;ARID5B:-2.49065019152;ZEB1:-2.49476378101;TFAP2{A,C}:-2.51197049418;SNAI1..3:-2.5526882499;ZNF148:-2.57820821175;RREB1:-2.60431292381;PBX1:-2.63849352645;ZIC1..3:-2.70281707969;KLF4:-2.72583348567;ONECUT1,2:-2.73350362153;NFY{A,B,C}:-2.7624205791;EVI1:-2.81373853684;bHLH_family:-2.83103077846;XCPE1{core}:-2.88096386273;HOX{A6,A7,B6,B7}:-2.89209315476;NR5A1,2:-3.00693624655;EBF1:-3.05326888635;AIRE:-3.07460756047;GFI1:-3.1715865748;UFEwm:-3.19972867824;NRF1:-3.29657946488;LMO2:-3.30396251301;MYOD1:-3.33344467894;AR:-3.33827528279;ZNF423:-3.44311928295;LHX3,4:-3.48103200873;PAX5:-3.52837143127;LEF1_TCF7_TCF7L1,2:-3.72721375392;HAND1,2:-3.80077881271;FOXQ1:-3.80780873307;YY1:-3.92075328151;ZNF143:-4.15136634084;TOPORS:-5.41544898734
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11874-125C2;search_select_hide=table117:FF:11874-125C2
}}
}}

Latest revision as of 18:25, 4 June 2020

Name:CD14+ monocytes - treated with Group A streptococci, donor2
Species:Human (Homo sapiens)
Library ID:CNhs13532
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexmale
age51
cell typemonocyte
cell lineNA
companyNA
collaborationChristine Wells (University of Queensland)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberD4-5
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005380
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13532 CAGE DRX008148 DRR009020
Accession ID Hg19

Library idBAMCTSS
CNhs13532 DRZ000445 DRZ001830
Accession ID Hg38

Library idBAMCTSS
CNhs13532 DRZ011795 DRZ013180
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral1.013
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.169
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.552
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.436
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.121
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.121
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.686
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.121
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.81
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0.552
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0.121
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.456
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.507
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0612
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.714
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.14
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.416
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.173
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.359
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0.359
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.88
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0.293
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.838
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.552
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.746
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.94
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.552
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.293
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.594
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.121
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.416
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0.552
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.432
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.693
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.9
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.359
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.74
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.122
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.254
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.532
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.00895
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.215
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.374
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0.511
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.851
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0.359
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.15
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.215
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.215
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.215
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13532

Jaspar motifP-value
MA0002.24.47736e-9
MA0003.10.805
MA0004.10.297
MA0006.10.839
MA0007.10.785
MA0009.10.588
MA0014.10.707
MA0017.10.18
MA0018.20.0535
MA0019.10.796
MA0024.10.00469
MA0025.15.91862e-4
MA0027.10.979
MA0028.10.117
MA0029.10.231
MA0030.10.232
MA0031.10.354
MA0035.20.347
MA0038.10.722
MA0039.20.64
MA0040.10.747
MA0041.10.604
MA0042.10.797
MA0043.11.93608e-8
MA0046.10.0203
MA0047.20.324
MA0048.10.75
MA0050.13.54954e-11
MA0051.12.42576e-5
MA0052.10.0347
MA0055.10.611
MA0057.10.401
MA0058.10.11
MA0059.10.146
MA0060.11.19301e-8
MA0061.13.60428e-16
MA0062.20.659
MA0065.20.0396
MA0066.10.0296
MA0067.12.17271e-6
MA0068.10.71
MA0069.10.817
MA0070.10.0313
MA0071.10.428
MA0072.10.553
MA0073.10.386
MA0074.10.149
MA0076.10.168
MA0077.10.266
MA0078.10.372
MA0079.20.129
MA0080.22.94564e-11
MA0081.13.70671e-4
MA0083.10.811
MA0084.10.597
MA0087.10.702
MA0088.10.488
MA0090.10.566
MA0091.10.668
MA0092.10.302
MA0093.10.327
MA0099.22.84712e-44
MA0100.10.858
MA0101.13.15037e-17
MA0102.26.92804e-9
MA0103.10.0268
MA0104.20.288
MA0105.13.09649e-21
MA0106.10.814
MA0107.17.19224e-22
MA0108.20.448
MA0111.10.47
MA0112.22.90208e-4
MA0113.11
MA0114.10.256
MA0115.10.765
MA0116.12.24332e-4
MA0117.10.0398
MA0119.10.232
MA0122.10.607
MA0124.10.245
MA0125.10.29
MA0131.10.358
MA0135.10.276
MA0136.16.03247e-12
MA0137.20.13
MA0138.20.292
MA0139.10.654
MA0140.10.384
MA0141.10.199
MA0142.10.608
MA0143.10.966
MA0144.10.0817
MA0145.10.598
MA0146.10.814
MA0147.10.388
MA0148.10.729
MA0149.10.182
MA0150.15.63344e-22
MA0152.10.731
MA0153.10.00428
MA0154.19.93587e-5
MA0155.10.924
MA0156.11.82119e-8
MA0157.10.863
MA0159.10.027
MA0160.10.0733
MA0162.10.83
MA0163.13.29622e-7
MA0164.10.643
MA0258.10.0283
MA0259.10.774



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13532

Novel motifP-value
10.119
100.0279
1000.797
1010.764
1020.965
1030.244
1040.568
1050.109
1060.0012
1070.206
1080.556
1090.417
110.209
1100.212
1110.159
1120.298
1130.486
1140.0345
1150.253
1160.969
1170.119
1180.198
1190.184
120.314
1200.794
1210.524
1220.592
1230.73
1240.557
1250.344
1260.234
1270.467
1280.0523
1290.37
130.118
1300.401
1310.849
1320.0423
1330.582
1340.508
1350.802
1360.842
1370.0278
1380.384
1390.117
140.509
1400.545
1410.272
1420.0326
1430.0238
1440.445
1450.414
1460.853
1470.738
1480.0131
1490.944
150.165
1500.373
1510.523
1520.395
1530.558
1540.801
1550.919
1560.935
1570.556
1580.0412
1590.139
160.406
1600.451
1610.486
1620.161
1630.13
1640.16
1650.308
1660.736
1670.33
1680.144
1690.0243
170.273
180.0874
190.526
20.486
200.232
210.828
220.326
230.034
240.408
250.487
260.0939
270.507
280.396
290.296
30.167
300.49
310.767
320.388
330.272
340.754
350.137
360.0697
370.0798
380.37
390.826
40.869
400.26
410.0176
420.354
430.0214
440.579
450.768
460.22
470.662
480.601
490.129
50.296
500.964
510.497
520.455
530.72
540.483
550.534
560.687
570.87
580.163
590.243
60.896
600.0604
610.681
620.0927
630.619
640.491
650.234
660.236
670.491
680.671
690.384
70.249
700.0653
710.0299
720.116
730.239
740.0517
750.195
760.17
770.634
780.138
790.663
80.433
800.144
810.333
820.232
830.0154
840.14
850.0303
860.0656
870.504
880.714
890.209
90.337
900.117
910.441
920.298
930.411
940.0957
950.522
960.381
970.522
980.179
990.052



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13532


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000632 (group A streptococci treatment sample)
0011106 (human CD14-positive monocytes - treated with Group A streptococci sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

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