FF:11883-125D2: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00004822 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008134;DRR009006;DRZ000431;DRZ001816;DRZ011781;DRZ013166 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000343,FF:0000350,FF:0011101 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure=FF:0000343,FF:0011101,FF:11883-125D2 | |fonse_treatment_closure=FF:0000343,FF:0011101,FF:11883-125D2 | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor3.CNhs13491.11883-125D2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor3.CNhs13491.11883-125D2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor3.CNhs13491.11883-125D2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor3.CNhs13491.11883-125D2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520mock%2520treated%252c%2520donor3.CNhs13491.11883-125D2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11883-125D2 | |id=FF:11883-125D2 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0011101 | ||
|is_obsolete= | |||
|library_id=CNhs13491 | |||
|library_id_phase_based=2:CNhs13491 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11883 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11883 | |||
|name=CD14+ monocytes - mock treated, donor3 | |name=CD14+ monocytes - mock treated, donor3 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13491,LSID1025,release012,COMPLETED | |profile_hcage=CNhs13491,LSID1025,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=125 | |rna_box=125 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=2.884275 | |rna_weight_ug=2.884275 | ||
|sample_age=21 | |sample_age=21 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.35648600380514e-249!GO:0043227;membrane-bound organelle;2.42982169459937e-131!GO:0043231;intracellular membrane-bound organelle;5.62013833251903e-131!GO:0005737;cytoplasm;4.27273491468583e-128!GO:0043226;organelle;1.05104454038896e-123!GO:0043229;intracellular organelle;8.05890657204491e-123!GO:0044444;cytoplasmic part;9.67184918415596e-83!GO:0044422;organelle part;2.80526728624362e-73!GO:0044237;cellular metabolic process;1.04163350744728e-72!GO:0043170;macromolecule metabolic process;2.01166507989841e-72!GO:0044446;intracellular organelle part;8.89333234374572e-72!GO:0044238;primary metabolic process;9.71785155156081e-72!GO:0005515;protein binding;8.43085191811929e-67!GO:0032991;macromolecular complex;2.16614683447769e-61!GO:0005634;nucleus;1.44695199836463e-57!GO:0003723;RNA binding;6.05337980958477e-57!GO:0030529;ribonucleoprotein complex;2.3152675860651e-53!GO:0044428;nuclear part;1.78467486298105e-51!GO:0019538;protein metabolic process;4.3911750473394e-49!GO:0044267;cellular protein metabolic process;1.43674424392607e-45!GO:0044260;cellular macromolecule metabolic process;1.5783030893757e-45!GO:0033036;macromolecule localization;8.47003003866514e-44!GO:0015031;protein transport;7.60238228612495e-43!GO:0045184;establishment of protein localization;1.1920052878922e-42!GO:0043233;organelle lumen;2.02059554848054e-42!GO:0031974;membrane-enclosed lumen;2.02059554848054e-42!GO:0043283;biopolymer metabolic process;2.08396820658428e-42!GO:0010467;gene expression;2.3513076618137e-41!GO:0006412;translation;2.94895993854244e-41!GO:0008104;protein localization;1.22659938501861e-40!GO:0006396;RNA processing;4.99351935250513e-35!GO:0016071;mRNA metabolic process;8.89116388007228e-35!GO:0031981;nuclear lumen;1.59844368301908e-33!GO:0005829;cytosol;1.9512074708097e-33!GO:0031090;organelle membrane;9.73549456191466e-33!GO:0009059;macromolecule biosynthetic process;1.80112036054773e-31!GO:0043234;protein complex;8.80453158262979e-31!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.13441980190467e-30!GO:0008380;RNA splicing;3.07707200539939e-30!GO:0005739;mitochondrion;6.44645837416195e-30!GO:0046907;intracellular transport;9.724635441707e-30!GO:0006397;mRNA processing;1.70241802002782e-29!GO:0006886;intracellular protein transport;4.88603835897274e-29!GO:0016043;cellular component organization and biogenesis;9.55896980271744e-29!GO:0005840;ribosome;1.01917286446304e-27!GO:0006915;apoptosis;1.53795148509304e-27!GO:0012501;programmed cell death;1.7728235857671e-27!GO:0044249;cellular biosynthetic process;4.64468977863469e-27!GO:0009058;biosynthetic process;8.12409976936456e-27!GO:0008219;cell death;4.87711601101369e-26!GO:0016265;death;4.87711601101369e-26!GO:0003735;structural constituent of ribosome;2.7374185798463e-25!GO:0031967;organelle envelope;4.02892730552657e-25!GO:0031975;envelope;7.44004781652493e-25!GO:0005654;nucleoplasm;9.87726291716271e-24!GO:0033279;ribosomal subunit;2.85836715722007e-23!GO:0051649;establishment of cellular localization;5.36676117626938e-23!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.26429321730444e-22!GO:0051641;cellular localization;3.11465153471506e-22!GO:0005681;spliceosome;1.12945195733432e-21!GO:0065003;macromolecular complex assembly;1.51562461579323e-21!GO:0044429;mitochondrial part;3.82790419441133e-21!GO:0044445;cytosolic part;1.52425407868214e-20!GO:0044451;nucleoplasm part;2.05316691861282e-20!GO:0000166;nucleotide binding;3.52764544853721e-20!GO:0016070;RNA metabolic process;3.94194170395021e-20!GO:0008134;transcription factor binding;4.73848061947145e-20!GO:0003676;nucleic acid binding;5.27210688174194e-20!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.61975099632364e-19!GO:0043412;biopolymer modification;1.05977682132423e-18!GO:0006512;ubiquitin cycle;2.36388675960599e-18!GO:0022607;cellular component assembly;3.0862373786569e-18!GO:0016192;vesicle-mediated transport;4.40133888741178e-18!GO:0044265;cellular macromolecule catabolic process;5.1997138358005e-18!GO:0042981;regulation of apoptosis;2.12589419346971e-17!GO:0043067;regulation of programmed cell death;4.46961580328287e-17!GO:0006464;protein modification process;4.68602259092769e-17!GO:0006119;oxidative phosphorylation;2.25403089122726e-16!GO:0007243;protein kinase cascade;2.38308111005636e-16!GO:0005740;mitochondrial envelope;2.49837096149815e-16!GO:0022618;protein-RNA complex assembly;3.20126299071114e-16!GO:0048770;pigment granule;3.57123164936338e-16!GO:0042470;melanosome;3.57123164936338e-16!GO:0043687;post-translational protein modification;4.16829361623341e-16!GO:0050794;regulation of cellular process;5.55004737156752e-16!GO:0031966;mitochondrial membrane;1.16656088841559e-15!GO:0016604;nuclear body;1.75171305310203e-15!GO:0019866;organelle inner membrane;3.88648989851487e-15!GO:0043285;biopolymer catabolic process;4.14238892477674e-15!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.56683773205554e-15!GO:0019941;modification-dependent protein catabolic process;7.04193722852217e-15!GO:0043632;modification-dependent macromolecule catabolic process;7.04193722852217e-15!GO:0006605;protein targeting;7.11154957923095e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;7.93960413382626e-15!GO:0006511;ubiquitin-dependent protein catabolic process;8.79668729505536e-15!GO:0044257;cellular protein catabolic process;8.79668729505536e-15!GO:0006996;organelle organization and biogenesis;9.82698196840809e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.30812983549227e-14!GO:0017111;nucleoside-triphosphatase activity;1.36333571115969e-14!GO:0016462;pyrophosphatase activity;1.36333571115969e-14!GO:0032553;ribonucleotide binding;1.63874771435133e-14!GO:0032555;purine ribonucleotide binding;1.63874771435133e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;1.79547452877753e-14!GO:0009057;macromolecule catabolic process;3.41627385750728e-14!GO:0048523;negative regulation of cellular process;3.86406897347104e-14!GO:0005773;vacuole;4.57684585209999e-14!GO:0016874;ligase activity;7.02982855860162e-14!GO:0017076;purine nucleotide binding;7.25548741041018e-14!GO:0006913;nucleocytoplasmic transport;9.29084205284034e-14!GO:0007242;intracellular signaling cascade;9.49566035285929e-14!GO:0044248;cellular catabolic process;1.42788932859937e-13!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.69522920694068e-13!GO:0051169;nuclear transport;1.79335915851489e-13!GO:0016607;nuclear speck;1.87633324009512e-13!GO:0005794;Golgi apparatus;2.81518896490376e-13!GO:0008135;translation factor activity, nucleic acid binding;6.6819132962451e-13!GO:0003712;transcription cofactor activity;7.97519287870566e-13!GO:0000323;lytic vacuole;8.45215442234933e-13!GO:0005764;lysosome;8.45215442234933e-13!GO:0015934;large ribosomal subunit;1.18165638890461e-12!GO:0005743;mitochondrial inner membrane;1.34323847332601e-12!GO:0048519;negative regulation of biological process;2.08120552109883e-12!GO:0050789;regulation of biological process;2.39936792407562e-12!GO:0006793;phosphorus metabolic process;3.27908019761678e-12!GO:0006796;phosphate metabolic process;3.27908019761678e-12!GO:0006457;protein folding;3.93427629240637e-12!GO:0000502;proteasome complex (sensu Eukaryota);4.30610434822259e-12!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.01059067170983e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.03172497255171e-12!GO:0044455;mitochondrial membrane part;1.07273386344329e-11!GO:0012505;endomembrane system;1.0732601548908e-11!GO:0003743;translation initiation factor activity;1.44398807865707e-11!GO:0030163;protein catabolic process;1.49011985512667e-11!GO:0015935;small ribosomal subunit;1.89386536682879e-11!GO:0043069;negative regulation of programmed cell death;2.71625010928723e-11!GO:0043066;negative regulation of apoptosis;3.25448606352218e-11!GO:0051246;regulation of protein metabolic process;3.28979646355662e-11!GO:0006413;translational initiation;4.01682127066684e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.83520995510801e-11!GO:0006259;DNA metabolic process;6.15754189758895e-11!GO:0005768;endosome;6.22734389618126e-11!GO:0006446;regulation of translational initiation;8.75225200319284e-11!GO:0016310;phosphorylation;9.35841668493916e-11!GO:0005524;ATP binding;1.11794341930462e-10!GO:0032559;adenyl ribonucleotide binding;1.24429986498512e-10!GO:0065009;regulation of a molecular function;1.3925917704511e-10!GO:0006366;transcription from RNA polymerase II promoter;1.93553858433233e-10!GO:0048193;Golgi vesicle transport;2.78666677856055e-10!GO:0005730;nucleolus;2.78666677856055e-10!GO:0051082;unfolded protein binding;3.96539470502532e-10!GO:0019222;regulation of metabolic process;4.04140418867684e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;4.52293999101589e-10!GO:0000375;RNA splicing, via transesterification reactions;4.52293999101589e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.52293999101589e-10!GO:0065007;biological regulation;4.54460094038788e-10!GO:0030554;adenyl nucleotide binding;5.4178669551037e-10!GO:0008639;small protein conjugating enzyme activity;8.11604032358396e-10!GO:0017038;protein import;1.84054933436522e-09!GO:0004842;ubiquitin-protein ligase activity;1.94268104440171e-09!GO:0005746;mitochondrial respiratory chain;1.95413317879966e-09!GO:0019787;small conjugating protein ligase activity;2.36243349062594e-09!GO:0051186;cofactor metabolic process;2.6078122226184e-09!GO:0016787;hydrolase activity;2.67852753186937e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.80458179284958e-09!GO:0006916;anti-apoptosis;3.37839595152926e-09!GO:0006950;response to stress;5.21508768596761e-09!GO:0019829;cation-transporting ATPase activity;6.21077938823818e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.39917923219999e-09!GO:0050136;NADH dehydrogenase (quinone) activity;7.06431676569389e-09!GO:0003954;NADH dehydrogenase activity;7.06431676569389e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.06431676569389e-09!GO:0031324;negative regulation of cellular metabolic process;7.67288918075576e-09!GO:0005635;nuclear envelope;7.9816087640766e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.63700013579711e-09!GO:0009967;positive regulation of signal transduction;1.09127011659546e-08!GO:0051170;nuclear import;1.352206910262e-08!GO:0044453;nuclear membrane part;1.45557728473288e-08!GO:0043228;non-membrane-bound organelle;1.51783051743541e-08!GO:0043232;intracellular non-membrane-bound organelle;1.51783051743541e-08!GO:0008565;protein transporter activity;1.86624265262587e-08!GO:0005770;late endosome;2.24869196746721e-08!GO:0015986;ATP synthesis coupled proton transport;2.38747710683182e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.38747710683182e-08!GO:0009056;catabolic process;2.42270239741583e-08!GO:0003713;transcription coactivator activity;2.44101568082571e-08!GO:0006606;protein import into nucleus;2.55228710852689e-08!GO:0008047;enzyme activator activity;2.89557381500445e-08!GO:0005783;endoplasmic reticulum;3.6319198397558e-08!GO:0006417;regulation of translation;3.94757147450817e-08!GO:0006732;coenzyme metabolic process;4.16136710232184e-08!GO:0042623;ATPase activity, coupled;4.37601819289468e-08!GO:0009152;purine ribonucleotide biosynthetic process;4.46245075483283e-08!GO:0009150;purine ribonucleotide metabolic process;4.72809330912777e-08!GO:0016887;ATPase activity;5.034752993554e-08!GO:0016564;transcription repressor activity;6.04089198499938e-08!GO:0016881;acid-amino acid ligase activity;6.06635806936671e-08!GO:0031323;regulation of cellular metabolic process;6.58813975869316e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.44162450666052e-08!GO:0048522;positive regulation of cellular process;7.45312246973892e-08!GO:0031965;nuclear membrane;7.76221339051236e-08!GO:0006163;purine nucleotide metabolic process;8.32178453930808e-08!GO:0006164;purine nucleotide biosynthetic process;8.90784903517597e-08!GO:0016481;negative regulation of transcription;1.02392256992927e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.05188617084332e-07!GO:0007264;small GTPase mediated signal transduction;1.15185592969262e-07!GO:0009259;ribonucleotide metabolic process;1.29791343464103e-07!GO:0042775;organelle ATP synthesis coupled electron transport;1.35053098749223e-07!GO:0042773;ATP synthesis coupled electron transport;1.35053098749223e-07!GO:0016568;chromatin modification;1.41442408594794e-07!GO:0019899;enzyme binding;1.42631270972998e-07!GO:0005774;vacuolar membrane;1.7086426042025e-07!GO:0009615;response to virus;1.71004755864883e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.82049673358161e-07!GO:0009892;negative regulation of metabolic process;1.95897839416078e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.07229222312504e-07!GO:0030964;NADH dehydrogenase complex (quinone);2.16955697041682e-07!GO:0045271;respiratory chain complex I;2.16955697041682e-07!GO:0005747;mitochondrial respiratory chain complex I;2.16955697041682e-07!GO:0050790;regulation of catalytic activity;2.18311520792908e-07!GO:0006754;ATP biosynthetic process;2.20847356463698e-07!GO:0006753;nucleoside phosphate metabolic process;2.20847356463698e-07!GO:0050657;nucleic acid transport;2.22459946432862e-07!GO:0051236;establishment of RNA localization;2.22459946432862e-07!GO:0050658;RNA transport;2.22459946432862e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.28107828585521e-07!GO:0009260;ribonucleotide biosynthetic process;2.31541399359039e-07!GO:0048518;positive regulation of biological process;2.48758458806287e-07!GO:0002376;immune system process;2.48758458806287e-07!GO:0006403;RNA localization;2.94878105918153e-07!GO:0009966;regulation of signal transduction;2.96615948507333e-07!GO:0043065;positive regulation of apoptosis;3.43422131444542e-07!GO:0006461;protein complex assembly;3.57319722843381e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.33617142423669e-07!GO:0005643;nuclear pore;4.34301816554704e-07!GO:0043068;positive regulation of programmed cell death;5.22607807973675e-07!GO:0005793;ER-Golgi intermediate compartment;5.30370861148704e-07!GO:0044440;endosomal part;5.62036922503632e-07!GO:0010008;endosome membrane;5.62036922503632e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.15748513639904e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.15748513639904e-07!GO:0044437;vacuolar part;8.18538313338745e-07!GO:0016563;transcription activator activity;8.34438165683667e-07!GO:0045786;negative regulation of progression through cell cycle;9.32197110901586e-07!GO:0009142;nucleoside triphosphate biosynthetic process;9.95471760769365e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.95471760769365e-07!GO:0005765;lysosomal membrane;1.06136326224357e-06!GO:0046034;ATP metabolic process;1.06843691372857e-06!GO:0031326;regulation of cellular biosynthetic process;1.07665163065446e-06!GO:0009889;regulation of biosynthetic process;1.07665163065446e-06!GO:0051726;regulation of cell cycle;1.08188519342479e-06!GO:0031980;mitochondrial lumen;1.09203348745105e-06!GO:0005759;mitochondrial matrix;1.09203348745105e-06!GO:0007049;cell cycle;1.11510914308253e-06!GO:0032446;protein modification by small protein conjugation;1.11845513168566e-06!GO:0003924;GTPase activity;1.2327639828391e-06!GO:0030695;GTPase regulator activity;1.43296314940343e-06!GO:0010468;regulation of gene expression;1.44727405773803e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;1.47109310382619e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.53932876284482e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.53932876284482e-06!GO:0000074;regulation of progression through cell cycle;1.53994231184251e-06!GO:0008026;ATP-dependent helicase activity;2.08259994963714e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.0937289191652e-06!GO:0009199;ribonucleoside triphosphate metabolic process;2.26320624804846e-06!GO:0044432;endoplasmic reticulum part;2.27558800942863e-06!GO:0016567;protein ubiquitination;2.38648232993343e-06!GO:0005525;GTP binding;2.6401306263924e-06!GO:0051028;mRNA transport;3.10994844599288e-06!GO:0005096;GTPase activator activity;3.10994844599288e-06!GO:0009607;response to biotic stimulus;3.32136941256564e-06!GO:0006917;induction of apoptosis;3.47990978332144e-06!GO:0048468;cell development;3.84384441082634e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.87930181526375e-06!GO:0051188;cofactor biosynthetic process;3.88685749806738e-06!GO:0006323;DNA packaging;4.09417117060833e-06!GO:0004386;helicase activity;4.20746276701656e-06!GO:0006974;response to DNA damage stimulus;4.22230834892759e-06!GO:0046930;pore complex;4.76640048142326e-06!GO:0009141;nucleoside triphosphate metabolic process;5.36595801808895e-06!GO:0012502;induction of programmed cell death;5.40214921069067e-06!GO:0016044;membrane organization and biogenesis;5.55610657085618e-06!GO:0009055;electron carrier activity;5.55610657085618e-06!GO:0031252;leading edge;5.5678693604223e-06!GO:0009108;coenzyme biosynthetic process;6.36835224125665e-06!GO:0006888;ER to Golgi vesicle-mediated transport;6.44196498542179e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.51381056654698e-06!GO:0005839;proteasome core complex (sensu Eukaryota);6.7495622814543e-06!GO:0048475;coated membrane;6.93664994356983e-06!GO:0030117;membrane coat;6.93664994356983e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;8.31948240841745e-06!GO:0005769;early endosome;8.42312037011345e-06!GO:0006752;group transfer coenzyme metabolic process;8.42312037011345e-06!GO:0003714;transcription corepressor activity;9.74914523452612e-06!GO:0006350;transcription;1.27198211383864e-05!GO:0016197;endosome transport;1.31472678504976e-05!GO:0006401;RNA catabolic process;1.34198249801265e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.3829620098423e-05!GO:0031982;vesicle;1.69951556959971e-05!GO:0065002;intracellular protein transport across a membrane;1.92851004551024e-05!GO:0043566;structure-specific DNA binding;2.1075964492798e-05!GO:0030120;vesicle coat;2.28811037075743e-05!GO:0030662;coated vesicle membrane;2.28811037075743e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.35115667861256e-05!GO:0003724;RNA helicase activity;2.4591609896131e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.59403854669041e-05!GO:0015399;primary active transmembrane transporter activity;2.59403854669041e-05!GO:0006955;immune response;2.6450564976285e-05!GO:0005789;endoplasmic reticulum membrane;2.68736294020381e-05!GO:0004298;threonine endopeptidase activity;3.29259717586451e-05!GO:0051168;nuclear export;3.95630468014391e-05!GO:0032561;guanyl ribonucleotide binding;4.14043296991139e-05!GO:0019001;guanyl nucleotide binding;4.14043296991139e-05!GO:0031902;late endosome membrane;4.15264616464492e-05!GO:0004674;protein serine/threonine kinase activity;6.04706768588808e-05!GO:0000151;ubiquitin ligase complex;6.10429889087737e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;6.44225337489057e-05!GO:0051336;regulation of hydrolase activity;6.54508228751781e-05!GO:0045259;proton-transporting ATP synthase complex;6.83326046865342e-05!GO:0006402;mRNA catabolic process;6.8408637790248e-05!GO:0000245;spliceosome assembly;7.03884614799648e-05!GO:0042254;ribosome biogenesis and assembly;7.1772204950282e-05!GO:0051276;chromosome organization and biogenesis;7.28872285821525e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.66494951981833e-05!GO:0051427;hormone receptor binding;8.08150201719419e-05!GO:0005083;small GTPase regulator activity;8.10106880689343e-05!GO:0003697;single-stranded DNA binding;8.43358598644619e-05!GO:0006281;DNA repair;8.52342013320398e-05!GO:0044431;Golgi apparatus part;9.24992606685256e-05!GO:0045892;negative regulation of transcription, DNA-dependent;9.39789500875354e-05!GO:0005057;receptor signaling protein activity;9.74352783070005e-05!GO:0008234;cysteine-type peptidase activity;0.000101876592777776!GO:0031410;cytoplasmic vesicle;0.000105889131860198!GO:0016740;transferase activity;0.000112939719915325!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000114265557439969!GO:0008632;apoptotic program;0.000114818790890469!GO:0006613;cotranslational protein targeting to membrane;0.000115864888206334!GO:0007265;Ras protein signal transduction;0.000117808997072661!GO:0046822;regulation of nucleocytoplasmic transport;0.000117886369027731!GO:0030532;small nuclear ribonucleoprotein complex;0.000137233953915723!GO:0035257;nuclear hormone receptor binding;0.000139367713158945!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00014162479216807!GO:0032940;secretion by cell;0.000148655179346533!GO:0006897;endocytosis;0.000154137694123112!GO:0010324;membrane invagination;0.000154137694123112!GO:0009060;aerobic respiration;0.000157196941550711!GO:0005761;mitochondrial ribosome;0.000170266505697967!GO:0000313;organellar ribosome;0.000170266505697967!GO:0030036;actin cytoskeleton organization and biogenesis;0.000171320807307504!GO:0005885;Arp2/3 protein complex;0.000200859921782676!GO:0043492;ATPase activity, coupled to movement of substances;0.000203648321374113!GO:0051789;response to protein stimulus;0.000222755191579118!GO:0006986;response to unfolded protein;0.000222755191579118!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000236518322075176!GO:0005798;Golgi-associated vesicle;0.000251360429353234!GO:0031988;membrane-bound vesicle;0.000267173915649829!GO:0006399;tRNA metabolic process;0.000267930593232496!GO:0006818;hydrogen transport;0.000282209729025883!GO:0008186;RNA-dependent ATPase activity;0.000289200068315046!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000312799902262456!GO:0004812;aminoacyl-tRNA ligase activity;0.000312799902262456!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000312799902262456!GO:0003729;mRNA binding;0.00033366980957761!GO:0007034;vacuolar transport;0.000338989989441351!GO:0005667;transcription factor complex;0.000351838051687012!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000353293116526673!GO:0022402;cell cycle process;0.000373553473455205!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000373909651070278!GO:0007040;lysosome organization and biogenesis;0.000397919654045938!GO:0001726;ruffle;0.000412582178049469!GO:0009893;positive regulation of metabolic process;0.000438128871451593!GO:0007005;mitochondrion organization and biogenesis;0.000455145050802651!GO:0015992;proton transport;0.000488667089356807!GO:0001816;cytokine production;0.00052279284661619!GO:0051223;regulation of protein transport;0.000612617275115608!GO:0045333;cellular respiration;0.000632401320456412!GO:0043038;amino acid activation;0.000632401320456412!GO:0006418;tRNA aminoacylation for protein translation;0.000632401320456412!GO:0043039;tRNA aminoacylation;0.000632401320456412!GO:0045449;regulation of transcription;0.000643256030075431!GO:0007050;cell cycle arrest;0.000654624455531876!GO:0008270;zinc ion binding;0.000656058067350907!GO:0009719;response to endogenous stimulus;0.00077657587094069!GO:0016023;cytoplasmic membrane-bound vesicle;0.000806765115348042!GO:0009117;nucleotide metabolic process;0.000832117373857963!GO:0046519;sphingoid metabolic process;0.000844571732022915!GO:0004004;ATP-dependent RNA helicase activity;0.000868083725255239!GO:0006351;transcription, DNA-dependent;0.000872324539421827!GO:0022890;inorganic cation transmembrane transporter activity;0.000872324539421827!GO:0006612;protein targeting to membrane;0.000878837494583107!GO:0032774;RNA biosynthetic process;0.000884536206878945!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.000901758948597775!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000946663000801273!GO:0007041;lysosomal transport;0.000985837113006306!GO:0007033;vacuole organization and biogenesis;0.00101815811646775!GO:0044262;cellular carbohydrate metabolic process;0.00108404261877909!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00113805554347984!GO:0005637;nuclear inner membrane;0.00114396371818193!GO:0033157;regulation of intracellular protein transport;0.00119332211223025!GO:0042306;regulation of protein import into nucleus;0.00119332211223025!GO:0008654;phospholipid biosynthetic process;0.00131549904979294!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00132140829867907!GO:0043087;regulation of GTPase activity;0.00134016133011827!GO:0005099;Ras GTPase activator activity;0.00144588428785795!GO:0016301;kinase activity;0.0014523262633135!GO:0043623;cellular protein complex assembly;0.00146001726928676!GO:0006672;ceramide metabolic process;0.00152318327973724!GO:0016251;general RNA polymerase II transcription factor activity;0.00161722223853309!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00168907766851401!GO:0030149;sphingolipid catabolic process;0.0017929201447169!GO:0051090;regulation of transcription factor activity;0.00188529652606476!GO:0051338;regulation of transferase activity;0.00193925756769018!GO:0046983;protein dimerization activity;0.00195044881572984!GO:0016072;rRNA metabolic process;0.00203022675139326!GO:0016779;nucleotidyltransferase activity;0.00206813810991861!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00209551529351397!GO:0030029;actin filament-based process;0.00213410810099895!GO:0046914;transition metal ion binding;0.00218154753079294!GO:0031901;early endosome membrane;0.00233748751292276!GO:0000139;Golgi membrane;0.00234451438176491!GO:0060090;molecular adaptor activity;0.00234992071661166!GO:0019904;protein domain specific binding;0.00237468296486943!GO:0045941;positive regulation of transcription;0.00249457641789848!GO:0002757;immune response-activating signal transduction;0.00254272508912115!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00260663060846601!GO:0006352;transcription initiation;0.00267764661223273!GO:0006364;rRNA processing;0.00279273278244563!GO:0033116;ER-Golgi intermediate compartment membrane;0.00281139414819127!GO:0006919;caspase activation;0.00300008430680856!GO:0030099;myeloid cell differentiation;0.00302737591329742!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.003057488721207!GO:0005741;mitochondrial outer membrane;0.00316939131949955!GO:0045893;positive regulation of transcription, DNA-dependent;0.0031770422359816!GO:0048487;beta-tubulin binding;0.00318739572905665!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00321673107249976!GO:0031325;positive regulation of cellular metabolic process;0.00327999204939049!GO:0006468;protein amino acid phosphorylation;0.00328274885427777!GO:0042990;regulation of transcription factor import into nucleus;0.00336077690206969!GO:0042991;transcription factor import into nucleus;0.00336077690206969!GO:0051252;regulation of RNA metabolic process;0.00353491092955463!GO:0045045;secretory pathway;0.00365193697569511!GO:0043549;regulation of kinase activity;0.0037138136789055!GO:0016363;nuclear matrix;0.00384454715122066!GO:0051187;cofactor catabolic process;0.00400149018919091!GO:0006643;membrane lipid metabolic process;0.00414039035379998!GO:0043021;ribonucleoprotein binding;0.00414039035379998!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00420117941825389!GO:0046966;thyroid hormone receptor binding;0.00445620040365936!GO:0031072;heat shock protein binding;0.00464418411681148!GO:0003690;double-stranded DNA binding;0.00467478210618095!GO:0006607;NLS-bearing substrate import into nucleus;0.00477869713651224!GO:0006099;tricarboxylic acid cycle;0.00477869713651224!GO:0046356;acetyl-CoA catabolic process;0.00477869713651224!GO:0043281;regulation of caspase activity;0.00478015706535806!GO:0018193;peptidyl-amino acid modification;0.00494127902462554!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00503582723228044!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00503582723228044!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00503582723228044!GO:0002274;myeloid leukocyte activation;0.00503582723228044!GO:0065004;protein-DNA complex assembly;0.00503601758219961!GO:0043085;positive regulation of catalytic activity;0.00508259382755796!GO:0002764;immune response-regulating signal transduction;0.00523965223037271!GO:0043280;positive regulation of caspase activity;0.00528842290928248!GO:0045859;regulation of protein kinase activity;0.00555599944061166!GO:0000287;magnesium ion binding;0.00562336224705943!GO:0005813;centrosome;0.00571505768514645!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00594512345682631!GO:0030041;actin filament polymerization;0.00624248339547061!GO:0051707;response to other organism;0.00659005483388648!GO:0045454;cell redox homeostasis;0.00695873207296858!GO:0007259;JAK-STAT cascade;0.00696022349573264!GO:0019867;outer membrane;0.00701215678045853!GO:0030027;lamellipodium;0.0070673703052526!GO:0006954;inflammatory response;0.00716838742725563!GO:0006611;protein export from nucleus;0.00717152698353309!GO:0006891;intra-Golgi vesicle-mediated transport;0.00722803012939909!GO:0004197;cysteine-type endopeptidase activity;0.00729453584114996!GO:0009165;nucleotide biosynthetic process;0.00730461432342133!GO:0006084;acetyl-CoA metabolic process;0.00730461432342133!GO:0032386;regulation of intracellular transport;0.00769128861724376!GO:0032318;regulation of Ras GTPase activity;0.00773704330901204!GO:0022415;viral reproductive process;0.00786373942531607!GO:0016791;phosphoric monoester hydrolase activity;0.00786373942531607!GO:0006355;regulation of transcription, DNA-dependent;0.00825782708338239!GO:0031968;organelle outer membrane;0.00858627076613444!GO:0031625;ubiquitin protein ligase binding;0.00872769671895435!GO:0006458;'de novo' protein folding;0.00906281062302352!GO:0051084;'de novo' posttranslational protein folding;0.00906281062302352!GO:0004185;serine carboxypeptidase activity;0.00968418816790735!GO:0005484;SNAP receptor activity;0.00982602131350473!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0105278680525821!GO:0006333;chromatin assembly or disassembly;0.0107319940735016!GO:0051056;regulation of small GTPase mediated signal transduction;0.0108599794595969!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0109478534086393!GO:0030134;ER to Golgi transport vesicle;0.0109478534086393!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0111162914809829!GO:0003725;double-stranded RNA binding;0.0111168610796407!GO:0019377;glycolipid catabolic process;0.0116478486332156!GO:0030118;clathrin coat;0.0116478486332156!GO:0030658;transport vesicle membrane;0.0117534070276153!GO:0030127;COPII vesicle coat;0.0122396106716395!GO:0012507;ER to Golgi transport vesicle membrane;0.0122396106716395!GO:0043488;regulation of mRNA stability;0.0124817730404592!GO:0043487;regulation of RNA stability;0.0124817730404592!GO:0030867;rough endoplasmic reticulum membrane;0.0127055282492483!GO:0001819;positive regulation of cytokine production;0.0133527842170892!GO:0005048;signal sequence binding;0.0135037730757167!GO:0003702;RNA polymerase II transcription factor activity;0.0135037730757167!GO:0051092;activation of NF-kappaB transcription factor;0.0147580925861469!GO:0009109;coenzyme catabolic process;0.0147580925861469!GO:0033367;protein localization in mast cell secretory granule;0.0147580925861469!GO:0033365;protein localization in organelle;0.0147580925861469!GO:0033371;T cell secretory granule organization and biogenesis;0.0147580925861469!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0147580925861469!GO:0033375;protease localization in T cell secretory granule;0.0147580925861469!GO:0042629;mast cell granule;0.0147580925861469!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0147580925861469!GO:0033364;mast cell secretory granule organization and biogenesis;0.0147580925861469!GO:0033380;granzyme B localization in T cell secretory granule;0.0147580925861469!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0147580925861469!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0147580925861469!GO:0033368;protease localization in mast cell secretory granule;0.0147580925861469!GO:0033366;protein localization in secretory granule;0.0147580925861469!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0147580925861469!GO:0033374;protein localization in T cell secretory granule;0.0147580925861469!GO:0048500;signal recognition particle;0.015012495901252!GO:0017166;vinculin binding;0.0150954951916987!GO:0019318;hexose metabolic process;0.0150954951916987!GO:0008624;induction of apoptosis by extracellular signals;0.0150954951916987!GO:0004177;aminopeptidase activity;0.0150954951916987!GO:0001817;regulation of cytokine production;0.0153862682953201!GO:0030518;steroid hormone receptor signaling pathway;0.015490822804819!GO:0008286;insulin receptor signaling pathway;0.015608482629655!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0158451038621121!GO:0008139;nuclear localization sequence binding;0.0159783120583138!GO:0030176;integral to endoplasmic reticulum membrane;0.0160031309063985!GO:0006405;RNA export from nucleus;0.0166940892050731!GO:0045637;regulation of myeloid cell differentiation;0.0168624840737409!GO:0030663;COPI coated vesicle membrane;0.0172853995331687!GO:0030126;COPI vesicle coat;0.0172853995331687!GO:0004722;protein serine/threonine phosphatase activity;0.0172897437041995!GO:0000118;histone deacetylase complex;0.0172897437041995!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0172897437041995!GO:0030097;hemopoiesis;0.017379711473334!GO:0005070;SH3/SH2 adaptor activity;0.0177535057156694!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0177604613594708!GO:0030137;COPI-coated vesicle;0.0181085816599412!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0184285420026522!GO:0008287;protein serine/threonine phosphatase complex;0.0184990319001815!GO:0006650;glycerophospholipid metabolic process;0.0195579805057371!GO:0005815;microtubule organizing center;0.0197065017463052!GO:0005694;chromosome;0.019761881472247!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0197757709919311!GO:0046578;regulation of Ras protein signal transduction;0.0199915323022752!GO:0015631;tubulin binding;0.0199915323022752!GO:0003711;transcription elongation regulator activity;0.0200930313891439!GO:0043433;negative regulation of transcription factor activity;0.0200930313891439!GO:0042802;identical protein binding;0.020231829159695!GO:0030660;Golgi-associated vesicle membrane;0.0205696052815176!GO:0030258;lipid modification;0.0207551946585786!GO:0046479;glycosphingolipid catabolic process;0.0212332441957638!GO:0005996;monosaccharide metabolic process;0.0213105951984654!GO:0043300;regulation of leukocyte degranulation;0.0221563252530796!GO:0000209;protein polyubiquitination;0.0221563252530796!GO:0002444;myeloid leukocyte mediated immunity;0.0221966461568108!GO:0006414;translational elongation;0.0227444960544161!GO:0046466;membrane lipid catabolic process;0.0230311357062128!GO:0045920;negative regulation of exocytosis;0.0231117298990602!GO:0043301;negative regulation of leukocyte degranulation;0.0231117298990602!GO:0043305;negative regulation of mast cell degranulation;0.0231117298990602!GO:0019783;small conjugating protein-specific protease activity;0.0231701509290015!GO:0006516;glycoprotein catabolic process;0.0233748089205264!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0234112281622122!GO:0045047;protein targeting to ER;0.0234112281622122!GO:0030521;androgen receptor signaling pathway;0.0234792676085266!GO:0043621;protein self-association;0.0234792676085266!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0234792676085266!GO:0002819;regulation of adaptive immune response;0.0234792676085266!GO:0008656;caspase activator activity;0.0238170749831429!GO:0051345;positive regulation of hydrolase activity;0.0241253290803308!GO:0050811;GABA receptor binding;0.024499953065706!GO:0030384;phosphoinositide metabolic process;0.0247110964386296!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0249336074037089!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0249336074037089!GO:0008637;apoptotic mitochondrial changes;0.0253528710377666!GO:0006383;transcription from RNA polymerase III promoter;0.0254966208550649!GO:0048471;perinuclear region of cytoplasm;0.0258817372627281!GO:0051085;chaperone cofactor-dependent protein folding;0.0267674593773544!GO:0019843;rRNA binding;0.0267674593773544!GO:0006665;sphingolipid metabolic process;0.0267935912072868!GO:0004843;ubiquitin-specific protease activity;0.0267966329425195!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0273009920393395!GO:0045576;mast cell activation;0.0273265924428798!GO:0046467;membrane lipid biosynthetic process;0.0284980017162065!GO:0051101;regulation of DNA binding;0.0289188582862091!GO:0051098;regulation of binding;0.0292791551163598!GO:0030119;AP-type membrane coat adaptor complex;0.0293469642236854!GO:0006914;autophagy;0.029409396984409!GO:0006091;generation of precursor metabolites and energy;0.0303589651277703!GO:0016311;dephosphorylation;0.0304530128418372!GO:0045113;regulation of integrin biosynthetic process;0.030495975551457!GO:0045112;integrin biosynthetic process;0.030495975551457!GO:0051091;positive regulation of transcription factor activity;0.0305291366178212!GO:0032763;regulation of mast cell cytokine production;0.030546713248073!GO:0032762;mast cell cytokine production;0.030546713248073!GO:0000785;chromatin;0.0309406712695917!GO:0030218;erythrocyte differentiation;0.0310452942065805!GO:0043299;leukocyte degranulation;0.0310953496586425!GO:0008312;7S RNA binding;0.0319113802333644!GO:0015923;mannosidase activity;0.0319905597257706!GO:0050851;antigen receptor-mediated signaling pathway;0.032047755116088!GO:0006260;DNA replication;0.0321371985881988!GO:0033033;negative regulation of myeloid cell apoptosis;0.0321371985881988!GO:0001803;regulation of type III hypersensitivity;0.0321371985881988!GO:0032733;positive regulation of interleukin-10 production;0.0321371985881988!GO:0033025;regulation of mast cell apoptosis;0.0321371985881988!GO:0001805;positive regulation of type III hypersensitivity;0.0321371985881988!GO:0033023;mast cell homeostasis;0.0321371985881988!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0321371985881988!GO:0033032;regulation of myeloid cell apoptosis;0.0321371985881988!GO:0001802;type III hypersensitivity;0.0321371985881988!GO:0033028;myeloid cell apoptosis;0.0321371985881988!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0321371985881988!GO:0033026;negative regulation of mast cell apoptosis;0.0321371985881988!GO:0033024;mast cell apoptosis;0.0321371985881988!GO:0005669;transcription factor TFIID complex;0.032375100716036!GO:0008625;induction of apoptosis via death domain receptors;0.032808113710242!GO:0008017;microtubule binding;0.0336705922984402!GO:0051049;regulation of transport;0.033692903905281!GO:0002467;germinal center formation;0.0339962140765793!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0340337529780296!GO:0000082;G1/S transition of mitotic cell cycle;0.034158549230425!GO:0045309;protein phosphorylated amino acid binding;0.0341793109777073!GO:0030133;transport vesicle;0.0345209954850419!GO:0006509;membrane protein ectodomain proteolysis;0.0347448591512815!GO:0033619;membrane protein proteolysis;0.0347448591512815!GO:0000339;RNA cap binding;0.0348455873209648!GO:0035035;histone acetyltransferase binding;0.0348559896850347!GO:0032640;tumor necrosis factor production;0.0349532483362138!GO:0006376;mRNA splice site selection;0.0359284138235395!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0359284138235395!GO:0043022;ribosome binding;0.0360852049186019!GO:0019883;antigen processing and presentation of endogenous antigen;0.0366863924536441!GO:0043506;regulation of JNK activity;0.0369292470505781!GO:0016788;hydrolase activity, acting on ester bonds;0.0369382998289455!GO:0008383;manganese superoxide dismutase activity;0.0369382998289455!GO:0001315;age-dependent response to reactive oxygen species;0.0369382998289455!GO:0040029;regulation of gene expression, epigenetic;0.036939652756732!GO:0002224;toll-like receptor signaling pathway;0.036939652756732!GO:0002221;pattern recognition receptor signaling pathway;0.036939652756732!GO:0051087;chaperone binding;0.0373891912843501!GO:0015036;disulfide oxidoreductase activity;0.038657723698282!GO:0032760;positive regulation of tumor necrosis factor production;0.0387931051760617!GO:0017091;AU-rich element binding;0.0387931051760617!GO:0050779;RNA destabilization;0.0387931051760617!GO:0000289;poly(A) tail shortening;0.0387931051760617!GO:0002237;response to molecule of bacterial origin;0.0395749814905095!GO:0048002;antigen processing and presentation of peptide antigen;0.0395749814905095!GO:0030131;clathrin adaptor complex;0.0396252698179263!GO:0008538;proteasome activator activity;0.0399997677099168!GO:0030503;regulation of cell redox homeostasis;0.0400632862953801!GO:0006354;RNA elongation;0.0409507480810657!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0410022143700761!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0410022143700761!GO:0051235;maintenance of localization;0.0411628919906658!GO:0003899;DNA-directed RNA polymerase activity;0.0417243291522461!GO:0006689;ganglioside catabolic process;0.041812534418653!GO:0046426;negative regulation of JAK-STAT cascade;0.0421585763521073!GO:0045792;negative regulation of cell size;0.0421692197303922!GO:0004402;histone acetyltransferase activity;0.0426675464855646!GO:0004468;lysine N-acetyltransferase activity;0.0426675464855646!GO:0000119;mediator complex;0.0430617843192984!GO:0003727;single-stranded RNA binding;0.0430617843192984!GO:0004221;ubiquitin thiolesterase activity;0.0432060609687967!GO:0030833;regulation of actin filament polymerization;0.0432331950621375!GO:0003746;translation elongation factor activity;0.0438607829206112!GO:0035258;steroid hormone receptor binding;0.0450567415098366!GO:0045603;positive regulation of endothelial cell differentiation;0.045241798140358!GO:0051219;phosphoprotein binding;0.0454103268614478!GO:0002824;positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0456523385475965!GO:0002821;positive regulation of adaptive immune response;0.0456523385475965!GO:0042613;MHC class II protein complex;0.0460013740448904!GO:0008333;endosome to lysosome transport;0.0461040658933751!GO:0005684;U2-dependent spliceosome;0.0467171069479847!GO:0004563;beta-N-acetylhexosaminidase activity;0.0471944959817184!GO:0005869;dynactin complex;0.0479812858759742!GO:0033673;negative regulation of kinase activity;0.0481156370220098!GO:0006469;negative regulation of protein kinase activity;0.0481156370220098!GO:0005975;carbohydrate metabolic process;0.0482790275117123!GO:0000049;tRNA binding;0.0482790275117123 | |||
|sample_id=11883 | |sample_id=11883 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=EP300:2.56746856377;SPI1:2.55040398014;SPIB:2.44693035913;NANOG{mouse}:2.40893285849;SREBF1,2:2.33948599128;ETS1,2:2.17303354683;CEBPA,B_DDIT3:1.98080844226;NFE2:1.93159414035;PAX2:1.91687590741;PPARG:1.84973182579;ELF1,2,4:1.78672125654;DMAP1_NCOR{1,2}_SMARC:1.77625634308;FOSL2:1.70282136794;NFIL3:1.70115662717;BACH2:1.63945728758;NFE2L2:1.56420457396;HLF:1.54010464103;FOXN1:1.52352640467;RUNX1..3:1.50187251665;FOS_FOS{B,L1}_JUN{B,D}:1.49660938565;FOXP3:1.41722628261;TLX2:1.33497181608;NR1H4:1.29669708275;HIF1A:1.27983336915;HMX1:1.27206568679;ATF5_CREB3:1.23927216399;NFKB1_REL_RELA:1.22222521626;IRF1,2:1.11846165131;TFCP2:1.09941854249;TGIF1:1.05351995016;FOXD3:1.02207681543;ATF4:1.01693698916;GLI1..3:1.01355224101;HES1:0.929835041179;IRF7:0.861450306369;SMAD1..7,9:0.857991429733;MAFB:0.851625906911;FOX{F1,F2,J1}:0.846661230877;SPZ1:0.786151820238;PDX1:0.718423831408;FOX{D1,D2}:0.700164347092;NFE2L1:0.678018836104;RXRA_VDR{dimer}:0.665600299557;CREB1:0.644343607349;RFX2..5_RFXANK_RFXAP:0.622756166788;HBP1_HMGB_SSRP1_UBTF:0.606004404627;ATF6:0.600623792989;HSF1,2:0.576450512032;ESR1:0.523373531422;GATA4:0.488925304721;NR6A1:0.398432616837;BPTF:0.340423253775;FOXO1,3,4:0.318316184712;ATF2:0.31774453197;JUN:0.317706165935;NANOG:0.314999510113;ZNF148:0.288776513938;STAT2,4,6:0.282358529917;ZBTB16:0.257973171202;ESRRA:0.250128475438;ALX4:0.240906049151;IKZF2:0.224272710928;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.221277058793;PITX1..3:0.138635905836;AHR_ARNT_ARNT2:0.124166826557;FOXP1:0.11492130221;NFIX:0.110777095867;EN1,2:0.0586303807515;CDX1,2,4:0.0498808289336;HMGA1,2:0.024794253783;VSX1,2:0.0179951972995;ALX1:-0.00328054345685;PRDM1:-0.007672030959;OCT4_SOX2{dimer}:-0.0136825918679;RBPJ:-0.0175892284898;MYB:-0.0543107819716;EGR1..3:-0.111456629036;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.145259612281;POU5F1:-0.179069508814;MYFfamily:-0.196916864653;RREB1:-0.203409418566;TFAP2{A,C}:-0.211513096494;PAX1,9:-0.21661023238;PATZ1:-0.222680080592;POU1F1:-0.250255906505;MZF1:-0.266940668099;HOX{A5,B5}:-0.27160744629;TFAP4:-0.311718282145;PAX3,7:-0.318373363364;XBP1:-0.333491329286;REST:-0.346194944939;TBP:-0.350007569211;EBF1:-0.35067184061;TEF:-0.372838916638;ZIC1..3:-0.375322124807;RXR{A,B,G}:-0.386512006189;STAT1,3:-0.387315930252;HNF4A_NR2F1,2:-0.397583709622;SRF:-0.46396335632;ZBTB6:-0.484666130969;TOPORS:-0.486058663189;GCM1,2:-0.497316522596;PRRX1,2:-0.525983081455;ZNF238:-0.555563253756;RFX1:-0.556919968463;NKX3-1:-0.562511980146;MEF2{A,B,C,D}:-0.565648443234;AR:-0.568064386797;GATA6:-0.573067801672;ELK1,4_GABP{A,B1}:-0.574610732248;SP1:-0.594099687562;MED-1{core}:-0.610962389716;POU2F1..3:-0.632655866357;NHLH1,2:-0.637276051519;TFAP2B:-0.64385494684;IKZF1:-0.655110887202;MYOD1:-0.656230594168;NKX2-2,8:-0.663013683737;HNF1A:-0.664242046157;NFATC1..3:-0.682055464918;ZNF423:-0.704406078489;TAL1_TCF{3,4,12}:-0.712749598945;NKX6-1,2:-0.722459693002;CUX2:-0.741043144536;SOX2:-0.74805777278;MTF1:-0.757212702529;DBP:-0.762045719892;GTF2A1,2:-0.788974792311;MTE{core}:-0.805298813448;TLX1..3_NFIC{dimer}:-0.815561183376;FOXA2:-0.816809218914;MAZ:-0.860878399382;ZFP161:-0.863190564784;PAX8:-0.87869219652;NKX2-3_NKX2-5:-0.903199917894;TBX4,5:-0.910981439738;STAT5{A,B}:-0.941351082176;LMO2:-0.963756816103;GTF2I:-1.01649406326;NKX3-2:-1.02172564962;PAX4:-1.02305371751;MYBL2:-1.02909775205;SOX5:-1.04748116508;PAX5:-1.0512901817;GZF1:-1.07912813644;HOX{A6,A7,B6,B7}:-1.0854067256;RORA:-1.09708630043;TFDP1:-1.09981005014;ZEB1:-1.11231752626;FOX{I1,J2}:-1.12168136692;XCPE1{core}:-1.12400160017;NR5A1,2:-1.14035999644;CRX:-1.14075399425;POU6F1:-1.14343501208;FOXQ1:-1.14815056791;PAX6:-1.15450695245;BREu{core}:-1.16813992129;TP53:-1.19731986501;KLF4:-1.20289695025;UFEwm:-1.2137102184;FOXM1:-1.22061794003;AIRE:-1.26084283542;HOX{A4,D4}:-1.2639813296;HIC1:-1.27023641576;FOXL1:-1.28010934374;EVI1:-1.28675693515;YY1:-1.34348670225;TEAD1:-1.37170780958;SNAI1..3:-1.37619697721;ARID5B:-1.38664180537;HOXA9_MEIS1:-1.42581857911;SOX{8,9,10}:-1.4315860476;E2F1..5:-1.49816162582;ONECUT1,2:-1.52280009256;ZNF384:-1.5413089705;T:-1.54316453614;HAND1,2:-1.57979911517;NR3C1:-1.68966041907;NRF1:-1.69692038579;bHLH_family:-1.73864310142;ZNF143:-1.88690893059;LHX3,4:-1.93364073162;GFI1B:-1.94593011659;NFY{A,B,C}:-1.9535681621;NKX2-1,4:-1.95820220058;ADNP_IRX_SIX_ZHX:-2.04891621721;SOX17:-2.06150609804;POU3F1..4:-2.22499917251;GFI1:-2.35185872138;PBX1:-2.36619054836;CDC5L:-2.58241859982;LEF1_TCF7_TCF7L1,2:-2.62068896336 | |top_motifs=EP300:2.56746856377;SPI1:2.55040398014;SPIB:2.44693035913;NANOG{mouse}:2.40893285849;SREBF1,2:2.33948599128;ETS1,2:2.17303354683;CEBPA,B_DDIT3:1.98080844226;NFE2:1.93159414035;PAX2:1.91687590741;PPARG:1.84973182579;ELF1,2,4:1.78672125654;DMAP1_NCOR{1,2}_SMARC:1.77625634308;FOSL2:1.70282136794;NFIL3:1.70115662717;BACH2:1.63945728758;NFE2L2:1.56420457396;HLF:1.54010464103;FOXN1:1.52352640467;RUNX1..3:1.50187251665;FOS_FOS{B,L1}_JUN{B,D}:1.49660938565;FOXP3:1.41722628261;TLX2:1.33497181608;NR1H4:1.29669708275;HIF1A:1.27983336915;HMX1:1.27206568679;ATF5_CREB3:1.23927216399;NFKB1_REL_RELA:1.22222521626;IRF1,2:1.11846165131;TFCP2:1.09941854249;TGIF1:1.05351995016;FOXD3:1.02207681543;ATF4:1.01693698916;GLI1..3:1.01355224101;HES1:0.929835041179;IRF7:0.861450306369;SMAD1..7,9:0.857991429733;MAFB:0.851625906911;FOX{F1,F2,J1}:0.846661230877;SPZ1:0.786151820238;PDX1:0.718423831408;FOX{D1,D2}:0.700164347092;NFE2L1:0.678018836104;RXRA_VDR{dimer}:0.665600299557;CREB1:0.644343607349;RFX2..5_RFXANK_RFXAP:0.622756166788;HBP1_HMGB_SSRP1_UBTF:0.606004404627;ATF6:0.600623792989;HSF1,2:0.576450512032;ESR1:0.523373531422;GATA4:0.488925304721;NR6A1:0.398432616837;BPTF:0.340423253775;FOXO1,3,4:0.318316184712;ATF2:0.31774453197;JUN:0.317706165935;NANOG:0.314999510113;ZNF148:0.288776513938;STAT2,4,6:0.282358529917;ZBTB16:0.257973171202;ESRRA:0.250128475438;ALX4:0.240906049151;IKZF2:0.224272710928;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.221277058793;PITX1..3:0.138635905836;AHR_ARNT_ARNT2:0.124166826557;FOXP1:0.11492130221;NFIX:0.110777095867;EN1,2:0.0586303807515;CDX1,2,4:0.0498808289336;HMGA1,2:0.024794253783;VSX1,2:0.0179951972995;ALX1:-0.00328054345685;PRDM1:-0.007672030959;OCT4_SOX2{dimer}:-0.0136825918679;RBPJ:-0.0175892284898;MYB:-0.0543107819716;EGR1..3:-0.111456629036;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.145259612281;POU5F1:-0.179069508814;MYFfamily:-0.196916864653;RREB1:-0.203409418566;TFAP2{A,C}:-0.211513096494;PAX1,9:-0.21661023238;PATZ1:-0.222680080592;POU1F1:-0.250255906505;MZF1:-0.266940668099;HOX{A5,B5}:-0.27160744629;TFAP4:-0.311718282145;PAX3,7:-0.318373363364;XBP1:-0.333491329286;REST:-0.346194944939;TBP:-0.350007569211;EBF1:-0.35067184061;TEF:-0.372838916638;ZIC1..3:-0.375322124807;RXR{A,B,G}:-0.386512006189;STAT1,3:-0.387315930252;HNF4A_NR2F1,2:-0.397583709622;SRF:-0.46396335632;ZBTB6:-0.484666130969;TOPORS:-0.486058663189;GCM1,2:-0.497316522596;PRRX1,2:-0.525983081455;ZNF238:-0.555563253756;RFX1:-0.556919968463;NKX3-1:-0.562511980146;MEF2{A,B,C,D}:-0.565648443234;AR:-0.568064386797;GATA6:-0.573067801672;ELK1,4_GABP{A,B1}:-0.574610732248;SP1:-0.594099687562;MED-1{core}:-0.610962389716;POU2F1..3:-0.632655866357;NHLH1,2:-0.637276051519;TFAP2B:-0.64385494684;IKZF1:-0.655110887202;MYOD1:-0.656230594168;NKX2-2,8:-0.663013683737;HNF1A:-0.664242046157;NFATC1..3:-0.682055464918;ZNF423:-0.704406078489;TAL1_TCF{3,4,12}:-0.712749598945;NKX6-1,2:-0.722459693002;CUX2:-0.741043144536;SOX2:-0.74805777278;MTF1:-0.757212702529;DBP:-0.762045719892;GTF2A1,2:-0.788974792311;MTE{core}:-0.805298813448;TLX1..3_NFIC{dimer}:-0.815561183376;FOXA2:-0.816809218914;MAZ:-0.860878399382;ZFP161:-0.863190564784;PAX8:-0.87869219652;NKX2-3_NKX2-5:-0.903199917894;TBX4,5:-0.910981439738;STAT5{A,B}:-0.941351082176;LMO2:-0.963756816103;GTF2I:-1.01649406326;NKX3-2:-1.02172564962;PAX4:-1.02305371751;MYBL2:-1.02909775205;SOX5:-1.04748116508;PAX5:-1.0512901817;GZF1:-1.07912813644;HOX{A6,A7,B6,B7}:-1.0854067256;RORA:-1.09708630043;TFDP1:-1.09981005014;ZEB1:-1.11231752626;FOX{I1,J2}:-1.12168136692;XCPE1{core}:-1.12400160017;NR5A1,2:-1.14035999644;CRX:-1.14075399425;POU6F1:-1.14343501208;FOXQ1:-1.14815056791;PAX6:-1.15450695245;BREu{core}:-1.16813992129;TP53:-1.19731986501;KLF4:-1.20289695025;UFEwm:-1.2137102184;FOXM1:-1.22061794003;AIRE:-1.26084283542;HOX{A4,D4}:-1.2639813296;HIC1:-1.27023641576;FOXL1:-1.28010934374;EVI1:-1.28675693515;YY1:-1.34348670225;TEAD1:-1.37170780958;SNAI1..3:-1.37619697721;ARID5B:-1.38664180537;HOXA9_MEIS1:-1.42581857911;SOX{8,9,10}:-1.4315860476;E2F1..5:-1.49816162582;ONECUT1,2:-1.52280009256;ZNF384:-1.5413089705;T:-1.54316453614;HAND1,2:-1.57979911517;NR3C1:-1.68966041907;NRF1:-1.69692038579;bHLH_family:-1.73864310142;ZNF143:-1.88690893059;LHX3,4:-1.93364073162;GFI1B:-1.94593011659;NFY{A,B,C}:-1.9535681621;NKX2-1,4:-1.95820220058;ADNP_IRX_SIX_ZHX:-2.04891621721;SOX17:-2.06150609804;POU3F1..4:-2.22499917251;GFI1:-2.35185872138;PBX1:-2.36619054836;CDC5L:-2.58241859982;LEF1_TCF7_TCF7L1,2:-2.62068896336 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11883-125D2;search_select_hide=table117:FF:11883-125D2 | |||
}} | }} | ||
Latest revision as of 18:26, 4 June 2020
| Name: | CD14+ monocytes - mock treated, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13491 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13491
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13491
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.156 |
| 10 | 10 | 0.0223 |
| 100 | 100 | 0.668 |
| 101 | 101 | 0.67 |
| 102 | 102 | 0.396 |
| 103 | 103 | 0.301 |
| 104 | 104 | 0.541 |
| 105 | 105 | 0.28 |
| 106 | 106 | 6.99327e-4 |
| 107 | 107 | 0.243 |
| 108 | 108 | 0.992 |
| 109 | 109 | 0.187 |
| 11 | 11 | 0.216 |
| 110 | 110 | 0.369 |
| 111 | 111 | 0.049 |
| 112 | 112 | 0.27 |
| 113 | 113 | 0.475 |
| 114 | 114 | 0.0191 |
| 115 | 115 | 0.214 |
| 116 | 116 | 0.875 |
| 117 | 117 | 0.0306 |
| 118 | 118 | 0.216 |
| 119 | 119 | 0.173 |
| 12 | 12 | 0.337 |
| 120 | 120 | 0.675 |
| 121 | 121 | 0.532 |
| 122 | 122 | 0.675 |
| 123 | 123 | 0.0411 |
| 124 | 124 | 0.673 |
| 125 | 125 | 0.816 |
| 126 | 126 | 0.159 |
| 127 | 127 | 0.228 |
| 128 | 128 | 0.0162 |
| 129 | 129 | 0.496 |
| 13 | 13 | 0.187 |
| 130 | 130 | 0.26 |
| 131 | 131 | 0.344 |
| 132 | 132 | 0.0696 |
| 133 | 133 | 0.79 |
| 134 | 134 | 0.62 |
| 135 | 135 | 0.253 |
| 136 | 136 | 0.972 |
| 137 | 137 | 0.00421 |
| 138 | 138 | 0.165 |
| 139 | 139 | 0.0475 |
| 14 | 14 | 0.414 |
| 140 | 140 | 0.19 |
| 141 | 141 | 0.333 |
| 142 | 142 | 0.729 |
| 143 | 143 | 0.0328 |
| 144 | 144 | 0.86 |
| 145 | 145 | 0.571 |
| 146 | 146 | 0.441 |
| 147 | 147 | 0.209 |
| 148 | 148 | 0.0262 |
| 149 | 149 | 0.742 |
| 15 | 15 | 0.157 |
| 150 | 150 | 0.482 |
| 151 | 151 | 0.273 |
| 152 | 152 | 0.0799 |
| 153 | 153 | 0.358 |
| 154 | 154 | 0.611 |
| 155 | 155 | 0.458 |
| 156 | 156 | 0.826 |
| 157 | 157 | 0.419 |
| 158 | 158 | 0.106 |
| 159 | 159 | 0.829 |
| 16 | 16 | 0.42 |
| 160 | 160 | 0.607 |
| 161 | 161 | 0.624 |
| 162 | 162 | 0.244 |
| 163 | 163 | 0.605 |
| 164 | 164 | 0.129 |
| 165 | 165 | 0.117 |
| 166 | 166 | 0.359 |
| 167 | 167 | 0.293 |
| 168 | 168 | 0.396 |
| 169 | 169 | 0.0106 |
| 17 | 17 | 0.205 |
| 18 | 18 | 0.25 |
| 19 | 19 | 0.267 |
| 2 | 2 | 0.896 |
| 20 | 20 | 0.441 |
| 21 | 21 | 0.349 |
| 22 | 22 | 0.154 |
| 23 | 23 | 0.0563 |
| 24 | 24 | 0.189 |
| 25 | 25 | 0.299 |
| 26 | 26 | 0.0526 |
| 27 | 27 | 0.715 |
| 28 | 28 | 0.44 |
| 29 | 29 | 0.397 |
| 3 | 3 | 0.0727 |
| 30 | 30 | 0.654 |
| 31 | 31 | 0.685 |
| 32 | 32 | 0.623 |
| 33 | 33 | 0.542 |
| 34 | 34 | 0.325 |
| 35 | 35 | 0.197 |
| 36 | 36 | 0.209 |
| 37 | 37 | 0.0565 |
| 38 | 38 | 0.311 |
| 39 | 39 | 0.811 |
| 4 | 4 | 0.618 |
| 40 | 40 | 0.18 |
| 41 | 41 | 0.0136 |
| 42 | 42 | 0.381 |
| 43 | 43 | 0.0437 |
| 44 | 44 | 0.914 |
| 45 | 45 | 0.661 |
| 46 | 46 | 0.172 |
| 47 | 47 | 0.537 |
| 48 | 48 | 0.466 |
| 49 | 49 | 0.109 |
| 5 | 5 | 0.216 |
| 50 | 50 | 0.955 |
| 51 | 51 | 0.342 |
| 52 | 52 | 0.29 |
| 53 | 53 | 0.225 |
| 54 | 54 | 0.321 |
| 55 | 55 | 0.398 |
| 56 | 56 | 0.628 |
| 57 | 57 | 0.933 |
| 58 | 58 | 0.104 |
| 59 | 59 | 0.108 |
| 6 | 6 | 0.596 |
| 60 | 60 | 0.0388 |
| 61 | 61 | 0.465 |
| 62 | 62 | 0.0357 |
| 63 | 63 | 0.493 |
| 64 | 64 | 0.525 |
| 65 | 65 | 0.211 |
| 66 | 66 | 0.348 |
| 67 | 67 | 0.461 |
| 68 | 68 | 0.878 |
| 69 | 69 | 0.838 |
| 7 | 7 | 0.227 |
| 70 | 70 | 0.0163 |
| 71 | 71 | 0.0346 |
| 72 | 72 | 0.241 |
| 73 | 73 | 0.0747 |
| 74 | 74 | 0.161 |
| 75 | 75 | 0.0558 |
| 76 | 76 | 0.28 |
| 77 | 77 | 0.413 |
| 78 | 78 | 0.0957 |
| 79 | 79 | 0.195 |
| 8 | 8 | 0.471 |
| 80 | 80 | 0.12 |
| 81 | 81 | 0.417 |
| 82 | 82 | 0.135 |
| 83 | 83 | 0.336 |
| 84 | 84 | 0.493 |
| 85 | 85 | 0.0127 |
| 86 | 86 | 0.0292 |
| 87 | 87 | 0.3 |
| 88 | 88 | 0.416 |
| 89 | 89 | 0.413 |
| 9 | 9 | 0.31 |
| 90 | 90 | 0.0705 |
| 91 | 91 | 0.343 |
| 92 | 92 | 0.188 |
| 93 | 93 | 0.161 |
| 94 | 94 | 0.036 |
| 95 | 95 | 0.376 |
| 96 | 96 | 0.433 |
| 97 | 97 | 0.926 |
| 98 | 98 | 0.167 |
| 99 | 99 | 0.114 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13491
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011101 human CD14-positive monocytes - mock treated sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000343 (control treatment sample)
0000350 (experimentally modified sample)
0011101 (human CD14-positive monocytes - mock treated sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)
