FF:11910-125G2: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@SAMD00004844 | |||
|accession_numbers=CAGE;DRX008167;DRR009039;DRZ000464;DRZ001849;DRZ011814;DRZ013199 | |||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057 | ||
Line 7: | Line 9: | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase= | |data_phase=2 | ||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.82!667.01!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.63!430.10!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!2.33!214.89!ZNF385A;;chr16:85932760..85932775,+!p1@IRF8!2.30!196.25!IRF8;;chr7:115670804..115670825,-!p1@TFEC!2.12!130.03!TFEC;;chr7:50344289..50344323,+!p1@IKZF1!1.97!92.58!IKZF1;;chr11:47400062..47400077,-!p2@SPI1!1.87!73.13!SPI1;;chr14:75745523..75745537,+!p1@FOS!1.84!7582.23!FOS;;chr12:54694758..54694805,-!p1@NFE2!1.83!79.72!NFE2;;chr2:145277640..145277771,-!p1@ZEB2!1.75!690.64!ZEB2;;chr5:88178983..88179012,-!p1@MEF2C!1.71!365.33!MEF2C;;chr20:39317868..39317884,-!p1@MAFB!1.70!545.50!MAFB;;chr11:47399996..47400014,-!p4@SPI1!1.58!36.65!SPI1;;chr10:51572408..51572454,+!p3@NCOA4!1.53!183.39!NCOA4;;chr6:144385698..144385742,-!p2@PLAGL1!1.53!39.38!PLAGL1;;chr11:47399947..47399961,-!p3@SPI1!1.53!32.95!SPI1;;chr7:28725740..28725778,+!p1@CREB5!1.51!267.29!CREB5;;chr11:47400032..47400043,-!p5@SPI1!1.49!30.22!SPI1;;chr2:68592394..68592405,+!p2@PLEK!1.46!27.81!PLEK;;chr7:28725715..28725727,+!p3@CREB5!1.41!28.93!CREB5;;chr2:157189180..157189290,-!p1@NR4A2!1.40!120.54!NR4A2;;chr11:47400045..47400060,-!p6@SPI1!1.40!24.27!SPI1;;chr19:45971246..45971265,+!p1@FOSB!1.37!403.10!FOSB;;chr4:106068026..106068084,+!p1@TET2!1.36!190.94!TET2;;chr19:42636586..42636607,-!p1@POU2F2!1.36!59.63!POU2F2;;chr21:34442439..34442455,+!p1@OLIG1!1.36!22.02!OLIG1;;chrY:21906594..21906622,-!p1@KDM5D!1.35!21.22!KDM5D;;chr11:128563948..128564003,+!p1@FLI1!1.31!226.94!FLI1;;chr2:70142232..70142251,+!p1@MXD1!1.31!106.88!MXD1;;chr2:61108695..61108753,+!p1@REL!1.30!127.13!REL;;chr13:41593425..41593480,-!p1@ELF1!1.30!118.78!ELF1;;chr7:149470641..149470694,-!p1@ZNF467!1.30!84.38!ZNF467;;chr5:88179017..88179046,-!p2@MEF2C!1.29!73.13!MEF2C;;chr7:50343634..50343717,+!p2@IKZF1!1.28!18.16!IKZF1;;chr12:54778351..54778378,-!p6@ZNF385A!1.28!18.00!ZNF385A;;chr10:31288398..31288455,-!p2@ZNF438!1.25!19.45!ZNF438;;chr19:33793430..33793447,-!p1@CEBPA!1.24!67.99!CEBPA;;chr12:54694807..54694832,-!p3@NFE2!1.23!16.07!NFE2;;chr9:110252035..110252057,-!p1@KLF4!1.19!226.94!KLF4;;chr21:36421535..36421610,-!p2@RUNX1!1.18!50.15!RUNX1;;chr19:12902289..12902307,+!p1@JUNB!1.16!3029.36!JUNB;;chr9:117150254..117150271,-!p1@AKNA!1.16!37.13!AKNA;;chr2:28618532..28618610,+!p4@FOSL2!1.16!22.98!FOSL2;;chr7:128577972..128578047,+!p1@IRF5!1.16!21.22!IRF5;;chr20:56195474..56195506,-!p1@ZBP1!1.16!13.50!ZBP1;;chr7:137620684..137620711,-!p4@CREB3L2!1.16!13.34!CREB3L2;;chr10:94449703..94449718,+!p1@HHEX!1.15!50.31!HHEX;;chr2:208031943..208031978,-!p5@KLF7!1.15!17.52!KLF7;;chr4:185395633..185395651,-!p2@IRF2!1.14!20.57!IRF2;;chr1:158979872..158979898,+!p3@IFI16!1.12!37.29!IFI16;;chr2:145277882..145277967,-!p3@ZEB2!1.11!20.41!ZEB2;;chr6:15246200..15246214,+!p2@JARID2!1.10!32.31!JARID2;;chr10:51572339..51572376,+!p4@NCOA4!1.10!26.36!NCOA4;;chr9:110250697..110250738,-!p2@KLF4!1.10!13.50!KLF4;;chr6:15246261..15246312,+!p1@JARID2!1.09!272.75!JARID2;;chr3:101546827..101546847,+!p2@NFKBIZ!1.09!16.07!NFKBIZ;;chr8:71316428..71316459,-!p2@NCOA2!1.08!18.48!NCOA2;;chr6:391743..391759,+!p1@IRF4!1.08!11.09!IRF4;;chr19:45251395..45251432,+!p8@BCL3!1.08!11.09!BCL3;;chr2:231090433..231090469,+!p1@SP140!1.08!11.09!SP140;;chr2:238600933..238600985,+!p3@LRRFIP1!1.07!58.66!LRRFIP1;;chr6:106534192..106534224,+!p1@PRDM1!1.07!30.70!PRDM1;;chr14:35872962..35873025,-!p3@NFKBIA!1.05!26.04!NFKBIA;;chr1:40367530..40367597,-!p1@MYCL1!1.05!18.64!MYCL1;;chr4:185395590..185395627,-!p3@IRF2!1.05!12.86!IRF2;;chr17:38497662..38497713,+!p4@RARA!1.05!12.05!RARA;;chr1:156470515..156470542,-!p2@MEF2D!1.04!53.20!MEF2D;;chr1:158979851..158979865,+!p5@IFI16!1.03!21.86!IFI16;;chr5:88179195..88179224,-!p3@MEF2C!1.03!15.43!MEF2C;;chr12:72056800..72056834,+!p1@THAP2!1.03!13.34!THAP2;;chr19:13213662..13213686,-!p1@LYL1!1.01!13.82!LYL1;;chr19:50432132..50432217,+!p2@ATF5!1.01!11.09!ATF5;;chr3:101568349..101568365,+!p1@NFKBIZ!1.00!475.10!NFKBIZ;;chr2:231084659..231084721,-!p1@SP110!1.00!215.05!SP110;;chr10:3827371..3827386,-!p2@KLF6!1.00!77.31!KLF6;;chr6:44233252..44233296,-!p1@NFKBIE!0.99!88.08!NFKBIE;;chr14:35873947..35873965,-!p1@NFKBIA!0.98!550.00!NFKBIA;;chr5:131826457..131826514,-!p1@IRF1!0.98!341.54!IRF1;;chr14:75988771..75988826,+!p1@BATF!0.98!11.57!BATF;;chr4:38665769..38665801,+!p2@KLF3!0.96!75.54!KLF3;;chr8:103667935..103667960,-!p1@KLF10!0.95!364.04!KLF10;;chr16:31885093..31885165,+!p1@ZNF267!0.95!125.69!ZNF267;;chr12:54694738..54694749,-!p5@NFE2!0.95!7.88!NFE2;;chr13:41593392..41593403,-!p7@ELF1!0.95!7.88!ELF1;;chr14:45722360..45722415,-!p1@MIS18BP1!0.94!125.69!MIS18BP1;;chr12:11802753..11802834,+!p2@ETV6!0.94!39.54!ETV6;;chr20:48807430..48807439,+!p8@CEBPB!0.94!11.89!CEBPB;;chr16:88752889..88752921,-!p1@SNAI3!0.94!9.16!SNAI3;;chr3:187463248..187463264,-!p1@BCL6!0.93!166.99!BCL6;;chr20:48807456..48807475,+!p3@CEBPB!0.93!14.95!CEBPB;;chr9:110252074..110252079,-!p3@KLF4!0.93!12.70!KLF4;;chr7:137620650..137620677,-!p3@CREB3L2!0.93!7.55!CREB3L2;;chr21:30672433..3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| |expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.82!667.01!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.63!430.10!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!2.33!214.89!ZNF385A;;chr16:85932760..85932775,+!p1@IRF8!2.30!196.25!IRF8;;chr7:115670804..115670825,-!p1@TFEC!2.12!130.03!TFEC;;chr7:50344289..50344323,+!p1@IKZF1!1.97!92.58!IKZF1;;chr11:47400062..47400077,-!p2@SPI1!1.87!73.13!SPI1;;chr14:75745523..75745537,+!p1@FOS!1.84!7582.23!FOS;;chr12:54694758..54694805,-!p1@NFE2!1.83!79.72!NFE2;;chr2:145277640..145277771,-!p1@ZEB2!1.75!690.64!ZEB2;;chr5:88178983..88179012,-!p1@MEF2C!1.71!365.33!MEF2C;;chr20:39317868..39317884,-!p1@MAFB!1.70!545.50!MAFB;;chr11:47399996..47400014,-!p4@SPI1!1.58!36.65!SPI1;;chr10:51572408..51572454,+!p3@NCOA4!1.53!183.39!NCOA4;;chr6:144385698..144385742,-!p2@PLAGL1!1.53!39.38!PLAGL1;;chr11:47399947..47399961,-!p3@SPI1!1.53!32.95!SPI1;;chr7:28725740..28725778,+!p1@CREB5!1.51!267.29!CREB5;;chr11:47400032..47400043,-!p5@SPI1!1.49!30.22!SPI1;;chr2:68592394..68592405,+!p2@PLEK!1.46!27.81!PLEK;;chr7:28725715..28725727,+!p3@CREB5!1.41!28.93!CREB5;;chr2:157189180..157189290,-!p1@NR4A2!1.40!120.54!NR4A2;;chr11:47400045..47400060,-!p6@SPI1!1.40!24.27!SPI1;;chr19:45971246..45971265,+!p1@FOSB!1.37!403.10!FOSB;;chr4:106068026..106068084,+!p1@TET2!1.36!190.94!TET2;;chr19:42636586..42636607,-!p1@POU2F2!1.36!59.63!POU2F2;;chr21:34442439..34442455,+!p1@OLIG1!1.36!22.02!OLIG1;;chrY:21906594..21906622,-!p1@KDM5D!1.35!21.22!KDM5D;;chr11:128563948..128564003,+!p1@FLI1!1.31!226.94!FLI1;;chr2:70142232..70142251,+!p1@MXD1!1.31!106.88!MXD1;;chr2:61108695..61108753,+!p1@REL!1.30!127.13!REL;;chr13:41593425..41593480,-!p1@ELF1!1.30!118.78!ELF1;;chr7:149470641..149470694,-!p1@ZNF467!1.30!84.38!ZNF467;;chr5:88179017..88179046,-!p2@MEF2C!1.29!73.13!MEF2C;;chr7:50343634..50343717,+!p2@IKZF1!1.28!18.16!IKZF1;;chr12:54778351..54778378,-!p6@ZNF385A!1.28!18.00!ZNF385A;;chr10:31288398..31288455,-!p2@ZNF438!1.25!19.45!ZNF438;;chr19:33793430..33793447,-!p1@CEBPA!1.24!67.99!CEBPA;;chr12:54694807..54694832,-!p3@NFE2!1.23!16.07!NFE2;;chr9:110252035..110252057,-!p1@KLF4!1.19!226.94!KLF4;;chr21:36421535..36421610,-!p2@RUNX1!1.18!50.15!RUNX1;;chr19:12902289..12902307,+!p1@JUNB!1.16!3029.36!JUNB;;chr9:117150254..117150271,-!p1@AKNA!1.16!37.13!AKNA;;chr2:28618532..28618610,+!p4@FOSL2!1.16!22.98!FOSL2;;chr7:128577972..128578047,+!p1@IRF5!1.16!21.22!IRF5;;chr20:56195474..56195506,-!p1@ZBP1!1.16!13.50!ZBP1;;chr7:137620684..137620711,-!p4@CREB3L2!1.16!13.34!CREB3L2;;chr10:94449703..94449718,+!p1@HHEX!1.15!50.31!HHEX;;chr2:208031943..208031978,-!p5@KLF7!1.15!17.52!KLF7;;chr4:185395633..185395651,-!p2@IRF2!1.14!20.57!IRF2;;chr1:158979872..158979898,+!p3@IFI16!1.12!37.29!IFI16;;chr2:145277882..145277967,-!p3@ZEB2!1.11!20.41!ZEB2;;chr6:15246200..15246214,+!p2@JARID2!1.10!32.31!JARID2;;chr10:51572339..51572376,+!p4@NCOA4!1.10!26.36!NCOA4;;chr9:110250697..110250738,-!p2@KLF4!1.10!13.50!KLF4;;chr6:15246261..15246312,+!p1@JARID2!1.09!272.75!JARID2;;chr3:101546827..101546847,+!p2@NFKBIZ!1.09!16.07!NFKBIZ;;chr8:71316428..71316459,-!p2@NCOA2!1.08!18.48!NCOA2;;chr6:391743..391759,+!p1@IRF4!1.08!11.09!IRF4;;chr19:45251395..45251432,+!p8@BCL3!1.08!11.09!BCL3;;chr2:231090433..231090469,+!p1@SP140!1.08!11.09!SP140;;chr2:238600933..238600985,+!p3@LRRFIP1!1.07!58.66!LRRFIP1;;chr6:106534192..106534224,+!p1@PRDM1!1.07!30.70!PRDM1;;chr14:35872962..35873025,-!p3@NFKBIA!1.05!26.04!NFKBIA;;chr1:40367530..40367597,-!p1@MYCL1!1.05!18.64!MYCL1;;chr4:185395590..185395627,-!p3@IRF2!1.05!12.86!IRF2;;chr17:38497662..38497713,+!p4@RARA!1.05!12.05!RARA;;chr1:156470515..156470542,-!p2@MEF2D!1.04!53.20!MEF2D;;chr1:158979851..158979865,+!p5@IFI16!1.03!21.86!IFI16;;chr5:88179195..88179224,-!p3@MEF2C!1.03!15.43!MEF2C;;chr12:72056800..72056834,+!p1@THAP2!1.03!13.34!THAP2;;chr19:13213662..13213686,-!p1@LYL1!1.01!13.82!LYL1;;chr19:50432132..50432217,+!p2@ATF5!1.01!11.09!ATF5;;chr3:101568349..101568365,+!p1@NFKBIZ!1.00!475.10!NFKBIZ;;chr2:231084659..231084721,-!p1@SP110!1.00!215.05!SP110;;chr10:3827371..3827386,-!p2@KLF6!1.00!77.31!KLF6;;chr6:44233252..44233296,-!p1@NFKBIE!0.99!88.08!NFKBIE;;chr14:35873947..35873965,-!p1@NFKBIA!0.98!550.00!NFKBIA;;chr5:131826457..131826514,-!p1@IRF1!0.98!341.54!IRF1;;chr14:75988771..75988826,+!p1@BATF!0.98!11.57!BATF;;chr4:38665769..38665801,+!p2@KLF3!0.96!75.54!KLF3;;chr8:103667935..103667960,-!p1@KLF10!0.95!364.04!KLF10;;chr16:31885093..31885165,+!p1@ZNF267!0.95!125.69!ZNF267;;chr12:54694738..54694749,-!p5@NFE2!0.95!7.88!NFE2;;chr13:41593392..41593403,-!p7@ELF1!0.95!7.88!ELF1;;chr14:45722360..45722415,-!p1@MIS18BP1!0.94!125.69!MIS18BP1;;chr12:11802753..11802834,+!p2@ETV6!0.94!39.54!ETV6;;chr20:48807430..48807439,+!p8@CEBPB!0.94!11.89!CEBPB;;chr16:88752889..88752921,-!p1@SNAI3!0.94!9.16!SNAI3;;chr3:187463248..187463264,-!p1@BCL6!0.93!166.99!BCL6;;chr20:48807456..48807475,+!p3@CEBPB!0.93!14.95!CEBPB;;chr9:110252074..110252079,-!p3@KLF4!0.93!12.70!KLF4;;chr7:137620650..137620677,-!p3@CREB3L2!0.93!7.55!CREB3L2;;chr21:30672433..30672464,+!p6@BACH1!0.93!7.55!BACH1;;chr21:30671235..30671253,+!p1@BACH1!0.92!96.44!BACH1;;chr2:61108650..61108687,+!p2@REL!0.92!37.13!REL;;chrX:106960180..106960197,-!p2@TSC22D3!0.92!29.09!TSC22D3;;chr16:3313791..3313834,+!p2@ZNF263!0.92!16.72!ZNF263;;chr2:145271342..145271377,-!p5@ZEB2!0.92!7.39!ZEB2;;chr21:34442540..34442560,+!p2@OLIG1!0.92!7.39!OLIG1;;chr8:48650715..48650735,-!p1@CEBPD!0.91!938.48!CEBPD;;chr12:54694653..54694672,-!p2@NFE2!0.91!7.07!NFE2;;chrX:129244454..129244488,-!p1@ELF4!0.90!52.24!ELF4;;chr2:60780753..60780800,-!p1@BCL11A!0.90!36.00!BCL11A;;chr14:75746722..75746777,+!p2@FOS!0.90!9.00!FOS;;chr2:28615716..28615733,+!p1@FOSL2!0.89!334.47!FOSL2;;chr1:8484007..8484061,-!p13@RERE!0.89!8.84!RERE;;chr9:117160738..117160782,-!p2@AKNA!0.87!27.97!AKNA;;chr17:38498594..38498661,+!p2@RARA!0.87!22.50!RARA;;chr14:35872453..35872485,-!p2@NFKBIA!0.87!16.55!NFKBIA;;chr19:36391434..36391450,-!p1@NFKBID!0.87!13.02!NFKBID;;chr5:142782823..142782854,-!p3@NR3C1!0.87!9.32!NR3C1;;chr14:75747250..75747267,+!p5@FOS!0.87!6.43!FOS;;chr8:116681194..116681214,-!p1@TRPS1!0.86!61.40!TRPS1;;chr19:45252008..45252024,+!p2@BCL3!0.86!21.70!BCL3;;chr6:106534230..106534254,+!p2@PRDM1!0.86!16.55!PRDM1;;chr12:72056773..72056796,+!p3@THAP2!0.86!8.36!THAP2;;chr9:88969339..88969422,-!p2@ZCCHC6!0.85!49.82!ZCCHC6;;chr2:208394817..208394834,+!p3@CREB1!0.85!26.04!CREB1;;chr9:137217986..137218049,+!p3@RXRA!0.85!18.16!RXRA;;chr10:35416142..35416169,+!p3@CREM!0.85!16.88!CREM;;chr7:50344251..50344288,+!p3@IKZF1!0.85!6.11!IKZF1;;chr3:187463179..187463201,-!p2@BCL6!0.84!25.88!BCL6;;chr17:38498402..38498445,+!p3@RARA!0.84!22.34!RARA;;chr3:187463220..187463232,-!p3@BCL6!0.84!18.80!BCL6;;chr9:3525727..3525828,-!p2@RFX3!0.84!15.75!RFX3;;chr2:8822176..8822196,+!p1@ID2!0.83!861.17!ID2;;chr2:48541789..48541874,+!p1@FOXN2!0.83!139.19!FOXN2;;chr10:104154246..104154347,+!p3@NFKB2!0.83!37.93!NFKB2;;chrX:131623044..131623089,-!p1@MBNL3!0.83!25.23!MBNL3;;chr21:30671690..30671762,+!p2@BACH1!0.83!21.06!BACH1;;chr9:110251836..110251887,-!p4@KLF4!0.83!7.88!KLF4;;chr2:238600998..238601013,+!p5@LRRFIP1!0.83!5.79!LRRFIP1;;chr6:12011943..12012015,+!p2@HIVEP1!0.82!19.13!HIVEP1;;chr10:94449675..94449694,+!p2@HHEX!0.82!16.07!HHEX;;chr8:116681150..116681164,-!p5@TRPS1!0.82!11.57!TRPS1;;chr2:61108808..61108821,+!p3@REL!0.82!7.23!REL;;chr6:15246741..15246765,+!p9@JARID2!0.82!5.63!JARID2;;chr11:47399920..47399931,-!p7@SPI1!0.82!5.63!SPI1;;chr19:16435625..16435682,+!p1@KLF2!0.81!192.39!KLF2;;chr14:62162258..62162269,+!p2@HIF1A!0.81!57.38!HIF1A;;chr2:70142189..70142223,+!p2@MXD1!0.81!41.79!MXD1;;chr7:17338324..17338341,+!p3@AHR!0.81!19.61!AHR;;chr19:45250948..45250998,+!p3@BCL3!0.81!14.47!BCL3;;chr13:41593405..41593416,-!p9@ELF1!0.81!5.46!ELF1;;chr2:174828545..174828644,-!p1@SP3!0.80!88.08!SP3;;chr2:208031542..208031595,-!p2@KLF7!0.80!40.18!KLF7;;chr5:176735063..176735088,-!p2@MXD3!0.80!5.30!MXD3;;chr21:30671211..30671234,+!p3@BACH1!0.79!27.16!BACH1;;chr20:56195525..56195556,-!p2@ZBP1!0.79!5.14!ZBP1;;chr14:75747296..75747329,+!p4@FOS!0.79!5.14!FOS;;chr5:172483347..172483407,+!p1@C5orf41!0.78!41.47!CREBRF;;chr3:39195075..39195088,-!p1@CSRNP1!0.78!34.56!CSRNP1;;chr5:88179230..88179270,-!p4@MEF2C!0.78!10.45!MEF2C;;chr3:71630690..71630750,-!p11@FOXP1!0.78!8.68!FOXP1;;chr12:53835425..53835437,+!p4@PRR13,p5@PCBP2!0.78!8.52!PCBP2;;chrY:2803415..2803468,+!p1@ZFY!0.78!4.98!ZFY;;chr8:48650697..48650708,-!p2@CEBPD!0.77!40.82!CEBPD;;chr7:150974206..150974255,-!p1@SMARCD3!0.77!33.75!SMARCD3;;chr10:43932296..43932360,+!p1@ZNF487P!0.77!10.77!ZNF487P;;chr13:72441315..72441454,-!p1@DACH1!0.77!10.45!DACH1;;chr2:185463247..185463263,+!p1@ZNF804A!0.77!9.16!ZNF804A;;chr6:15246217..15246228,+!p3@JARID2!0.77!9.00!JARID2;;chr14:75746340..75746368,+!p3@FOS!0.77!4.82!FOS;;chr14:62162285..62162296,+!p3@HIF1A!0.76!27.16!HIF1A;;chr2:157198916..157198978,-!p2@NR4A2!0.76!18.32!NR4A2;;chr9:102584262..102584276,+!p1@NR4A3!0.76!11.41!NR4A3;;chr9:94186101..94186122,-!p1@NFIL3!0.75!71.20!NFIL3;;chr10:31320777..31320834,-!p1@ZNF438!0.75!26.04!ZNF438;;chr21:30671189..30671207,+!p4@BACH1!0.75!17.52!BACH1;;chr14:65569101..65569119,-!p3@MAX!0.75!15.91!MAX;;chr10:35484053..35484076,+!p1@CREM!0.75!12.54!CREM;;chr6:135516877..135516900,+!p5@MYB!0.75!4.66!MYB;;chr14:75746781..75746799,+!p6@FOS!0.75!4.66!FOS;;chrX:106960285..106960299,-!p1@TSC22D3!0.74!134.85!TSC22D3;;chr9:88969303..88969335,-!p1@ZCCHC6!0.74!46.61!ZCCHC6;;chr4:185395191..185395226,-!p4@IRF2!0.74!6.59!IRF2;;chr1:158979686..158979745,+!p1@IFI16!0.73!160.08!IFI16;;chr8:37553261..37553282,+!p2@ZNF703!0.73!37.61!ZNF703;;chr14:64970670..64970712,-!p3@ZBTB25!0.73!10.13!ZBTB25;;chr12:54785074..54785122,-!p2@ZNF385A!0.73!7.07!ZNF385A;;chr4:38665810..38665827,+!p1@KLF3!0.72!70.24!KLF3;;chr1:158979792..158979814,+!p2@IFI16!0.72!45.97!IFI16;;chr12:53774567..53774658,+!p2@SP1!0.72!23.14!SP1;;chr4:140098339..140098392,-!p1@ELF2!0.71!38.41!ELF2;;chr16:29816957..29817031,+!p7@MAZ!0.71!20.89!MAZ;;chr3:71630980..71631110,-!p3@FOXP1!0.71!15.91!FOXP1;;chr18:3448455.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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000860;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405 | |||
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 37: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor3.CNhs13540.11910-125G2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor3.CNhs13540.11910-125G2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor3.CNhs13540.11910-125G2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor3.CNhs13540.11910-125G2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor3.CNhs13540.11910-125G2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11910-125G2 | |id=FF:11910-125G2 | ||
|is_a=EFO:0002091;;FF:0011111 | |is_a=EFO:0002091;;FF:0011111 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs13540 | |||
|library_id_phase_based=2:CNhs13540 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11910 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11910 | |||
|name=CD14+CD16- Monocytes, donor3 | |name=CD14+CD16- Monocytes, donor3 | ||
|namespace= | |namespace= | ||
Line 45: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13540,LSID1029,release012,COMPLETED | |profile_hcage=CNhs13540,LSID1029,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=125 | |rna_box=125 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
Line 60: | Line 79: | ||
|rna_weight_ug=0.3947 | |rna_weight_ug=0.3947 | ||
|sample_age=23 | |sample_age=23 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
Line 81: | Line 101: | ||
|top_motifs=NFIL3:2.68152917543;SPIB:2.47476698328;SPI1:2.2240886621;CEBPA,B_DDIT3:2.00212781963;FOXN1:1.94204515345;DMAP1_NCOR{1,2}_SMARC:1.87062343763;IRF1,2:1.79916937165;ETS1,2:1.76272738176;TLX2:1.75270932118;NANOG{mouse}:1.65692223467;ATF5_CREB3:1.64506163957;RFX2..5_RFXANK_RFXAP:1.63506262901;MAFB:1.54975757103;IRF7:1.53365702591;HLF:1.51341385495;RUNX1..3:1.51186710345;PAX2:1.47420082538;HMX1:1.45452483356;ELF1,2,4:1.3910845539;TGIF1:1.37907424846;SREBF1,2:1.34179634514;FOXA2:1.33034680374;FOXO1,3,4:1.31549431987;NFKB1_REL_RELA:1.10365411377;FOXP3:1.10213415463;RXRA_VDR{dimer}:1.02033236917;EP300:1.01066381896;HIF1A:1.00005883025;ALX1:0.898139044942;HMGA1,2:0.856389592612;CREB1:0.844437154789;ATF4:0.833559215274;NFE2L2:0.759620187082;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.740025904454;BPTF:0.708937482422;FOX{D1,D2}:0.696855694703;FOX{F1,F2,J1}:0.691641523888;HBP1_HMGB_SSRP1_UBTF:0.673667594655;NKX2-2,8:0.67318789168;NFIX:0.668158293068;FOSL2:0.628693002472;GATA4:0.589975316213;ATF2:0.584394658796;TAL1_TCF{3,4,12}:0.572215705738;CDX1,2,4:0.444011324524;FOX{I1,J2}:0.419263450271;PAX4:0.410775829365;ALX4:0.402017082905;BACH2:0.365442571452;ESRRA:0.342216067222;NFE2:0.337188163065;NANOG:0.334286611782;FOS_FOS{B,L1}_JUN{B,D}:0.314165570504;HOXA9_MEIS1:0.290694911241;STAT2,4,6:0.288091877543;JUN:0.276740316248;NR6A1:0.265289093873;GLI1..3:0.162156513237;OCT4_SOX2{dimer}:0.108788145487;POU1F1:0.0167496298802;MYB:0.0150240915901;TFCP2:-0.00244885863033;RORA:-0.00372676871181;ZBTB16:-0.0141838048957;SPZ1:-0.0160106136035;EN1,2:-0.0270321052633;NR1H4:-0.0612526008117;CUX2:-0.064120755754;ATF6:-0.0730166961701;AHR_ARNT_ARNT2:-0.0867251869738;TOPORS:-0.0984712621069;MYFfamily:-0.129853985115;HNF4A_NR2F1,2:-0.131644199641;T:-0.136348924465;SOX2:-0.142044388787;PITX1..3:-0.152301054572;NFE2L1:-0.166208578749;TFAP4:-0.171633884713;FOXD3:-0.183134048583;POU5F1:-0.189414463894;VSX1,2:-0.200764901257;GATA6:-0.213448618496;TEF:-0.215485544069;STAT1,3:-0.216688775594;PRDM1:-0.256764736229;IKZF2:-0.281598778573;BREu{core}:-0.29431780826;STAT5{A,B}:-0.327928938315;NKX3-2:-0.334074861125;ESR1:-0.351537635549;NKX6-1,2:-0.359926176273;PAX3,7:-0.366709570129;MZF1:-0.403013526887;SMAD1..7,9:-0.41229176953;PRRX1,2:-0.428896892546;HSF1,2:-0.4397034542;FOXQ1:-0.445562787901;GCM1,2:-0.446941872601;PDX1:-0.448762615356;FOXP1:-0.451906149342;NR3C1:-0.455397012694;MYOD1:-0.460038968654;AIRE:-0.4700061284;HNF1A:-0.471780324326;NHLH1,2:-0.475421002589;CRX:-0.478691458345;SRF:-0.482027552555;RXR{A,B,G}:-0.484176446025;RFX1:-0.491055290047;ELK1,4_GABP{A,B1}:-0.496667687481;HOX{A5,B5}:-0.502402684374;EBF1:-0.51065076865;RREB1:-0.511269168166;REST:-0.516992258572;MEF2{A,B,C,D}:-0.55250250714;NR5A1,2:-0.555687118304;HES1:-0.574853832626;KLF4:-0.578422076642;NFATC1..3:-0.588203990739;MTF1:-0.589416258261;ZNF148:-0.591540734948;PAX8:-0.625089006805;PPARG:-0.635498855815;PATZ1:-0.668119955179;ZNF238:-0.681106986217;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.682769521082;TFAP2{A,C}:-0.690225120023;MTE{core}:-0.697880335564;PAX1,9:-0.698680977307;NKX2-3_NKX2-5:-0.701315584875;NKX3-1:-0.727327976558;YY1:-0.742801833817;SOX5:-0.746846120377;XBP1:-0.756156291855;POU2F1..3:-0.764015024934;MED-1{core}:-0.785222976459;ZFP161:-0.810251177854;DBP:-0.82163854538;HAND1,2:-0.829967438067;SOX{8,9,10}:-0.843094602596;ZEB1:-0.851781529118;AR:-0.883871495594;ZNF423:-0.911383133382;PAX5:-0.97467149916;SP1:-0.980757199096;E2F1..5:-0.987640081189;RBPJ:-1.01673580987;ARID5B:-1.01674574961;MAZ:-1.01771610375;ZIC1..3:-1.03077372903;GZF1:-1.03520383391;ZBTB6:-1.03860662635;NKX2-1,4:-1.08864854984;GTF2I:-1.09408479628;LHX3,4:-1.095901281;SNAI1..3:-1.1054192469;LEF1_TCF7_TCF7L1,2:-1.11312645787;EVI1:-1.113243938;LMO2:-1.13764277022;NRF1:-1.15444512512;EGR1..3:-1.15663208001;TFDP1:-1.16492973435;HOX{A4,D4}:-1.17313379546;IKZF1:-1.18597790498;HOX{A6,A7,B6,B7}:-1.22231126599;PBX1:-1.24880605493;TFAP2B:-1.25391853608;PAX6:-1.2670004817;NFY{A,B,C}:-1.31405440783;TLX1..3_NFIC{dimer}:-1.31705156799;ONECUT1,2:-1.33218045314;TEAD1:-1.33300833168;HIC1:-1.3469962462;TBX4,5:-1.37705044726;ADNP_IRX_SIX_ZHX:-1.40204067632;UFEwm:-1.41862425044;TP53:-1.44849456309;GFI1B:-1.46834996164;TBP:-1.47850661987;ZNF384:-1.54862666173;MYBL2:-1.55864194466;POU3F1..4:-1.56103711173;ZNF143:-1.59179034413;FOXL1:-1.63775036479;GTF2A1,2:-1.66225056808;POU6F1:-1.67991799582;FOXM1:-1.71536648048;GFI1:-1.7296119225;SOX17:-1.78746494209;bHLH_family:-1.8286698315;CDC5L:-1.89803801215;XCPE1{core}:-2.03772045234 | |top_motifs=NFIL3:2.68152917543;SPIB:2.47476698328;SPI1:2.2240886621;CEBPA,B_DDIT3:2.00212781963;FOXN1:1.94204515345;DMAP1_NCOR{1,2}_SMARC:1.87062343763;IRF1,2:1.79916937165;ETS1,2:1.76272738176;TLX2:1.75270932118;NANOG{mouse}:1.65692223467;ATF5_CREB3:1.64506163957;RFX2..5_RFXANK_RFXAP:1.63506262901;MAFB:1.54975757103;IRF7:1.53365702591;HLF:1.51341385495;RUNX1..3:1.51186710345;PAX2:1.47420082538;HMX1:1.45452483356;ELF1,2,4:1.3910845539;TGIF1:1.37907424846;SREBF1,2:1.34179634514;FOXA2:1.33034680374;FOXO1,3,4:1.31549431987;NFKB1_REL_RELA:1.10365411377;FOXP3:1.10213415463;RXRA_VDR{dimer}:1.02033236917;EP300:1.01066381896;HIF1A:1.00005883025;ALX1:0.898139044942;HMGA1,2:0.856389592612;CREB1:0.844437154789;ATF4:0.833559215274;NFE2L2:0.759620187082;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.740025904454;BPTF:0.708937482422;FOX{D1,D2}:0.696855694703;FOX{F1,F2,J1}:0.691641523888;HBP1_HMGB_SSRP1_UBTF:0.673667594655;NKX2-2,8:0.67318789168;NFIX:0.668158293068;FOSL2:0.628693002472;GATA4:0.589975316213;ATF2:0.584394658796;TAL1_TCF{3,4,12}:0.572215705738;CDX1,2,4:0.444011324524;FOX{I1,J2}:0.419263450271;PAX4:0.410775829365;ALX4:0.402017082905;BACH2:0.365442571452;ESRRA:0.342216067222;NFE2:0.337188163065;NANOG:0.334286611782;FOS_FOS{B,L1}_JUN{B,D}:0.314165570504;HOXA9_MEIS1:0.290694911241;STAT2,4,6:0.288091877543;JUN:0.276740316248;NR6A1:0.265289093873;GLI1..3:0.162156513237;OCT4_SOX2{dimer}:0.108788145487;POU1F1:0.0167496298802;MYB:0.0150240915901;TFCP2:-0.00244885863033;RORA:-0.00372676871181;ZBTB16:-0.0141838048957;SPZ1:-0.0160106136035;EN1,2:-0.0270321052633;NR1H4:-0.0612526008117;CUX2:-0.064120755754;ATF6:-0.0730166961701;AHR_ARNT_ARNT2:-0.0867251869738;TOPORS:-0.0984712621069;MYFfamily:-0.129853985115;HNF4A_NR2F1,2:-0.131644199641;T:-0.136348924465;SOX2:-0.142044388787;PITX1..3:-0.152301054572;NFE2L1:-0.166208578749;TFAP4:-0.171633884713;FOXD3:-0.183134048583;POU5F1:-0.189414463894;VSX1,2:-0.200764901257;GATA6:-0.213448618496;TEF:-0.215485544069;STAT1,3:-0.216688775594;PRDM1:-0.256764736229;IKZF2:-0.281598778573;BREu{core}:-0.29431780826;STAT5{A,B}:-0.327928938315;NKX3-2:-0.334074861125;ESR1:-0.351537635549;NKX6-1,2:-0.359926176273;PAX3,7:-0.366709570129;MZF1:-0.403013526887;SMAD1..7,9:-0.41229176953;PRRX1,2:-0.428896892546;HSF1,2:-0.4397034542;FOXQ1:-0.445562787901;GCM1,2:-0.446941872601;PDX1:-0.448762615356;FOXP1:-0.451906149342;NR3C1:-0.455397012694;MYOD1:-0.460038968654;AIRE:-0.4700061284;HNF1A:-0.471780324326;NHLH1,2:-0.475421002589;CRX:-0.478691458345;SRF:-0.482027552555;RXR{A,B,G}:-0.484176446025;RFX1:-0.491055290047;ELK1,4_GABP{A,B1}:-0.496667687481;HOX{A5,B5}:-0.502402684374;EBF1:-0.51065076865;RREB1:-0.511269168166;REST:-0.516992258572;MEF2{A,B,C,D}:-0.55250250714;NR5A1,2:-0.555687118304;HES1:-0.574853832626;KLF4:-0.578422076642;NFATC1..3:-0.588203990739;MTF1:-0.589416258261;ZNF148:-0.591540734948;PAX8:-0.625089006805;PPARG:-0.635498855815;PATZ1:-0.668119955179;ZNF238:-0.681106986217;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.682769521082;TFAP2{A,C}:-0.690225120023;MTE{core}:-0.697880335564;PAX1,9:-0.698680977307;NKX2-3_NKX2-5:-0.701315584875;NKX3-1:-0.727327976558;YY1:-0.742801833817;SOX5:-0.746846120377;XBP1:-0.756156291855;POU2F1..3:-0.764015024934;MED-1{core}:-0.785222976459;ZFP161:-0.810251177854;DBP:-0.82163854538;HAND1,2:-0.829967438067;SOX{8,9,10}:-0.843094602596;ZEB1:-0.851781529118;AR:-0.883871495594;ZNF423:-0.911383133382;PAX5:-0.97467149916;SP1:-0.980757199096;E2F1..5:-0.987640081189;RBPJ:-1.01673580987;ARID5B:-1.01674574961;MAZ:-1.01771610375;ZIC1..3:-1.03077372903;GZF1:-1.03520383391;ZBTB6:-1.03860662635;NKX2-1,4:-1.08864854984;GTF2I:-1.09408479628;LHX3,4:-1.095901281;SNAI1..3:-1.1054192469;LEF1_TCF7_TCF7L1,2:-1.11312645787;EVI1:-1.113243938;LMO2:-1.13764277022;NRF1:-1.15444512512;EGR1..3:-1.15663208001;TFDP1:-1.16492973435;HOX{A4,D4}:-1.17313379546;IKZF1:-1.18597790498;HOX{A6,A7,B6,B7}:-1.22231126599;PBX1:-1.24880605493;TFAP2B:-1.25391853608;PAX6:-1.2670004817;NFY{A,B,C}:-1.31405440783;TLX1..3_NFIC{dimer}:-1.31705156799;ONECUT1,2:-1.33218045314;TEAD1:-1.33300833168;HIC1:-1.3469962462;TBX4,5:-1.37705044726;ADNP_IRX_SIX_ZHX:-1.40204067632;UFEwm:-1.41862425044;TP53:-1.44849456309;GFI1B:-1.46834996164;TBP:-1.47850661987;ZNF384:-1.54862666173;MYBL2:-1.55864194466;POU3F1..4:-1.56103711173;ZNF143:-1.59179034413;FOXL1:-1.63775036479;GTF2A1,2:-1.66225056808;POU6F1:-1.67991799582;FOXM1:-1.71536648048;GFI1:-1.7296119225;SOX17:-1.78746494209;bHLH_family:-1.8286698315;CDC5L:-1.89803801215;XCPE1{core}:-2.03772045234 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11910-125G2;search_select_hide=table117:FF:11910-125G2 | |||
}} | }} |
Latest revision as of 18:28, 4 June 2020
Name: | CD14+CD16- Monocytes, donor3 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs13540 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13540
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13540
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0945 |
10 | 10 | 0.0106 |
100 | 100 | 0.803 |
101 | 101 | 0.309 |
102 | 102 | 0.74 |
103 | 103 | 0.15 |
104 | 104 | 0.757 |
105 | 105 | 0.29 |
106 | 106 | 0.00698 |
107 | 107 | 0.419 |
108 | 108 | 0.644 |
109 | 109 | 0.163 |
11 | 11 | 0.152 |
110 | 110 | 0.362 |
111 | 111 | 0.0262 |
112 | 112 | 0.345 |
113 | 113 | 0.414 |
114 | 114 | 0.00614 |
115 | 115 | 0.121 |
116 | 116 | 0.979 |
117 | 117 | 0.0321 |
118 | 118 | 0.126 |
119 | 119 | 0.237 |
12 | 12 | 0.414 |
120 | 120 | 0.918 |
121 | 121 | 0.932 |
122 | 122 | 0.779 |
123 | 123 | 0.103 |
124 | 124 | 0.803 |
125 | 125 | 0.232 |
126 | 126 | 0.189 |
127 | 127 | 0.222 |
128 | 128 | 0.0367 |
129 | 129 | 0.655 |
13 | 13 | 0.132 |
130 | 130 | 0.216 |
131 | 131 | 0.803 |
132 | 132 | 0.0381 |
133 | 133 | 0.704 |
134 | 134 | 0.454 |
135 | 135 | 0.0485 |
136 | 136 | 0.876 |
137 | 137 | 4.51574e-5 |
138 | 138 | 0.0729 |
139 | 139 | 0.0449 |
14 | 14 | 0.32 |
140 | 140 | 0.0884 |
141 | 141 | 0.213 |
142 | 142 | 0.77 |
143 | 143 | 0.107 |
144 | 144 | 0.603 |
145 | 145 | 0.694 |
146 | 146 | 0.675 |
147 | 147 | 0.228 |
148 | 148 | 0.0093 |
149 | 149 | 0.61 |
15 | 15 | 0.102 |
150 | 150 | 0.592 |
151 | 151 | 0.366 |
152 | 152 | 0.445 |
153 | 153 | 0.608 |
154 | 154 | 0.527 |
155 | 155 | 0.199 |
156 | 156 | 0.857 |
157 | 157 | 0.548 |
158 | 158 | 0.0182 |
159 | 159 | 0.383 |
16 | 16 | 0.487 |
160 | 160 | 0.616 |
161 | 161 | 0.621 |
162 | 162 | 0.397 |
163 | 163 | 0.683 |
164 | 164 | 0.154 |
165 | 165 | 0.0447 |
166 | 166 | 0.807 |
167 | 167 | 0.174 |
168 | 168 | 0.328 |
169 | 169 | 0.0165 |
17 | 17 | 0.283 |
18 | 18 | 0.15 |
19 | 19 | 0.189 |
2 | 2 | 0.988 |
20 | 20 | 0.774 |
21 | 21 | 0.526 |
22 | 22 | 0.249 |
23 | 23 | 0.1 |
24 | 24 | 0.212 |
25 | 25 | 0.177 |
26 | 26 | 0.0471 |
27 | 27 | 0.448 |
28 | 28 | 0.352 |
29 | 29 | 0.12 |
3 | 3 | 0.092 |
30 | 30 | 0.525 |
31 | 31 | 0.648 |
32 | 32 | 0.603 |
33 | 33 | 0.221 |
34 | 34 | 0.479 |
35 | 35 | 0.116 |
36 | 36 | 0.0649 |
37 | 37 | 0.0967 |
38 | 38 | 0.435 |
39 | 39 | 0.911 |
4 | 4 | 0.947 |
40 | 40 | 0.23 |
41 | 41 | 0.0294 |
42 | 42 | 0.309 |
43 | 43 | 0.0877 |
44 | 44 | 0.927 |
45 | 45 | 0.846 |
46 | 46 | 0.161 |
47 | 47 | 0.453 |
48 | 48 | 0.472 |
49 | 49 | 0.121 |
5 | 5 | 0.1 |
50 | 50 | 0.927 |
51 | 51 | 0.364 |
52 | 52 | 0.309 |
53 | 53 | 0.262 |
54 | 54 | 0.446 |
55 | 55 | 0.391 |
56 | 56 | 0.804 |
57 | 57 | 0.721 |
58 | 58 | 0.0764 |
59 | 59 | 0.155 |
6 | 6 | 0.692 |
60 | 60 | 0.0439 |
61 | 61 | 0.218 |
62 | 62 | 0.0202 |
63 | 63 | 0.583 |
64 | 64 | 0.405 |
65 | 65 | 0.28 |
66 | 66 | 0.212 |
67 | 67 | 0.429 |
68 | 68 | 0.486 |
69 | 69 | 0.82 |
7 | 7 | 0.149 |
70 | 70 | 0.0163 |
71 | 71 | 0.0234 |
72 | 72 | 0.238 |
73 | 73 | 0.23 |
74 | 74 | 0.0208 |
75 | 75 | 0.0946 |
76 | 76 | 0.176 |
77 | 77 | 0.616 |
78 | 78 | 0.166 |
79 | 79 | 0.0273 |
8 | 8 | 0.503 |
80 | 80 | 0.157 |
81 | 81 | 0.253 |
82 | 82 | 0.123 |
83 | 83 | 0.627 |
84 | 84 | 0.998 |
85 | 85 | 0.033 |
86 | 86 | 0.0512 |
87 | 87 | 0.831 |
88 | 88 | 0.475 |
89 | 89 | 0.547 |
9 | 9 | 0.302 |
90 | 90 | 0.0152 |
91 | 91 | 0.268 |
92 | 92 | 0.241 |
93 | 93 | 0.529 |
94 | 94 | 0.0227 |
95 | 95 | 0.345 |
96 | 96 | 0.322 |
97 | 97 | 0.959 |
98 | 98 | 0.162 |
99 | 99 | 0.0155 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13540
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011111 human CD14-positive CD16-negative Monocytes sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011111 (human CD14-positive CD16-negative Monocytes sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)