FF:1377-27I3: Difference between revisions

Latest revision as of 19:05, 4 June 2020

Name:	adrenal gland, neonate N25
Species:	Mouse (Mus musculus)
Library ID:	CNhs11223
Sample type:	developmental
Genomic View:	UCSC
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	C57BL/6J
tissue	adrenal gland
dev stage	25 days neonate
sex	mixture
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005199

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11223		CAGE		DRX008933		DRR009807

Accession ID Mm9

Library id		BAM		CTSS
CNhs11223		DRZ001232		DRZ002615

Accession ID Mm10

Library id		BAM		CTSS
CNhs11223		DRZ012582		DRZ013965

Download raw sequence, BAM & CTSS

Mm9

Fasta	BAM	CTSS
download	download	donwload

Mm10

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

CNhs11223

0	0
1	0
10	0
100	0
1000	0.138
1001	0.161
1002	0.0514
1003	-0.0159
1004	0
1005	0
1006	0.0845
1007	-0.0437
1008	0
1009	0.269
101	-0.0793
1010	0
1011	-0.00857
1012	8.764537e-4
1013	0.141
1014	-0.0874
1015	-0.149
1016	0.00282
1017	0
1018	0
1019	0
102	0
1020	0
1021	0.0514
1022	0.274
1023	0
1024	0.177
1025	0
1026	0
1027	0
1028	0
1029	-0.0379
103	0
1030	0
1031	-0.0421
1032	0.0574
1033	-0.0151
1034	0.0514
1035	0
1036	-0.348
1037	0
1038	-0.0542
1039	0.501
104	0
1040	-0.032
1041	0.63

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11223

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.606
MA0003.1	MA0003.1	0.312
MA0004.1	MA0004.1	0.104
MA0006.1	MA0006.1	0.122
MA0007.1	MA0007.1	0.264
MA0009.1	MA0009.1	0.366
MA0014.1	MA0014.1	0.075
MA0017.1	MA0017.1	0.00623
MA0018.2	MA0018.2	0.545
MA0019.1	MA0019.1	0.526
MA0024.1	MA0024.1	0.0134
MA0025.1	MA0025.1	0.00498
MA0027.1	MA0027.1	0.102
MA0028.1	MA0028.1	0.493
MA0029.1	MA0029.1	0.0119
MA0030.1	MA0030.1	0.506
MA0031.1	MA0031.1	0.22
MA0035.2	MA0035.2	0.864
MA0038.1	MA0038.1	0.0575
MA0039.2	MA0039.2	0.00485
MA0040.1	MA0040.1	0.974
MA0041.1	MA0041.1	0.271
MA0042.1	MA0042.1	0.71
MA0043.1	MA0043.1	0.419
MA0046.1	MA0046.1	0.476
MA0047.2	MA0047.2	0.723
MA0048.1	MA0048.1	0.494
MA0050.1	MA0050.1	0.00258
MA0051.1	MA0051.1	0.00107
MA0052.1	MA0052.1	0.408
MA0055.1	MA0055.1	0.425
MA0057.1	MA0057.1	0.935
MA0058.1	MA0058.1	0.218
MA0059.1	MA0059.1	0.0571
MA0060.1	MA0060.1	0.212
MA0061.1	MA0061.1	0.604
MA0062.2	MA0062.2	0.883
MA0065.2	MA0065.2	2.22947e-7
MA0066.1	MA0066.1	0.578
MA0067.1	MA0067.1	0.883
MA0068.1	MA0068.1	0.498
MA0069.1	MA0069.1	0.0598
MA0070.1	MA0070.1	0.0252
MA0071.1	MA0071.1	5.52998e-5
MA0072.1	MA0072.1	0.00373
MA0073.1	MA0073.1	0.769
MA0074.1	MA0074.1	0.996
MA0076.1	MA0076.1	0.348
MA0077.1	MA0077.1	0.994
MA0078.1	MA0078.1	0.142
MA0079.2	MA0079.2	0.0414
MA0080.2	MA0080.2	0.00585
MA0081.1	MA0081.1	0.815
MA0083.1	MA0083.1	0.727
MA0084.1	MA0084.1	0.604
MA0087.1	MA0087.1	0.849
MA0088.1	MA0088.1	0.455
MA0090.1	MA0090.1	0.865
MA0091.1	MA0091.1	0.262
MA0092.1	MA0092.1	0.968
MA0093.1	MA0093.1	0.17
MA0099.2	MA0099.2	0.197
MA0100.1	MA0100.1	0.205
MA0101.1	MA0101.1	0.85
MA0102.2	MA0102.2	0.8
MA0103.1	MA0103.1	1.62727e-5
MA0104.2	MA0104.2	0.0523
MA0105.1	MA0105.1	0.0245
MA0106.1	MA0106.1	0.695
MA0107.1	MA0107.1	0.918
MA0108.2	MA0108.2	0.0676
MA0111.1	MA0111.1	0.355
MA0112.2	MA0112.2	0.0673
MA0113.1	MA0113.1	0.812
MA0114.1	MA0114.1	4.03915e-6
MA0115.1	MA0115.1	0.732
MA0116.1	MA0116.1	0.52
MA0117.1	MA0117.1	0.818
MA0119.1	MA0119.1	0.0256
MA0122.1	MA0122.1	0.732
MA0124.1	MA0124.1	0.785
MA0125.1	MA0125.1	0.448
MA0131.1	MA0131.1	0.613
MA0135.1	MA0135.1	0.487
MA0136.1	MA0136.1	0.0576
MA0137.2	MA0137.2	0.704
MA0138.2	MA0138.2	0.179
MA0139.1	MA0139.1	0.992
MA0140.1	MA0140.1	0.903
MA0141.1	MA0141.1	1.12831e-8
MA0142.1	MA0142.1	0.00911
MA0143.1	MA0143.1	0.819
MA0144.1	MA0144.1	0.804
MA0145.1	MA0145.1	0.186
MA0146.1	MA0146.1	0.00268
MA0147.1	MA0147.1	0.0408
MA0148.1	MA0148.1	0.503
MA0149.1	MA0149.1	0.0935
MA0150.1	MA0150.1	0.0123
MA0152.1	MA0152.1	0.995
MA0153.1	MA0153.1	0.131
MA0154.1	MA0154.1	0.288
MA0155.1	MA0155.1	0.891
MA0156.1	MA0156.1	0.469
MA0157.1	MA0157.1	0.625
MA0159.1	MA0159.1	0.714
MA0160.1	MA0160.1	1.30517e-7
MA0162.1	MA0162.1	0.488
MA0163.1	MA0163.1	0.596
MA0164.1	MA0164.1	0.345
MA0258.1	MA0258.1	0.0504
MA0259.1	MA0259.1	0.0441

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11223

Novel motif	Logo	P-value
1	1	0.298
10	10	0.639
100	100	0.18
101	101	0.971
102	102	0.786
103	103	0.747
104	104	0.809
105	105	0.739
106	106	0.255
107	107	0.725
108	108	0.0811
109	109	0.243
11	11	0.152
110	110	0.284
111	111	0.399
112	112	0.46
113	113	0.951
114	114	0.815
115	115	0.119
116	116	0.353
117	117	0.463
118	118	0.948
119	119	0.613
12	12	0.683
120	120	0.0117
121	121	0.137
122	122	0.96
123	123	0.261
124	124	0.383
125	125	0.711
126	126	0.23
127	127	0.245
128	128	0.169
129	129	0.543
13	13	0.0957
130	130	0.496
131	131	0.18
132	132	0.978
133	133	0.787
134	134	0.638
135	135	0.144
136	136	0.0161
137	137	0.812
138	138	0.194
139	139	0.281
14	14	0.278
140	140	0.0679
141	141	0.926
142	142	0.65
143	143	0.614
144	144	0.805
145	145	0.839
146	146	0.27
147	147	0.786
148	148	0.253
149	149	0.0136
15	15	0.69
150	150	0.387
151	151	0.464
152	152	0.00446
153	153	0.803
154	154	0.31
155	155	0.917
156	156	6.46565e-4
157	157	0.43
158	158	0.724
159	159	0.907
160	160	0.423
161	161	0.669
162	162	0.795
163	163	0.828
164	164	0.746
165	165	0.996
166	166	0.448
167	167	0.0656
168	168	0.847
169	169	0.0257
17	17	0.153
18	18	0.961
19	19	0.251
2	2	0.24
20	20	0.303
21	21	0.956
22	22	0.0153
23	23	0.186
24	24	0.158
25	25	0.738
26	26	0.672
27	27	0.922
28	28	0.866
29	29	0.385
3	3	0.755
30	30	0.588
31	31	0.705
32	32	0.583
33	33	0.36
34	34	0.673
35	35	0.427
36	36	0.232
37	37	0.247
38	38	0.18
39	39	0.237
4	4	0.903
40	40	0.659
41	41	0.094
42	42	0.626
43	43	0.921
44	44	0.258
45	45	0.693
46	46	0.176
47	47	0.505
48	48	0.306
49	49	0.463
5	5	0.788
50	50	0.392
51	51	0.864
52	52	0.984
53	53	0.679
54	54	0.664
55	55	0.0073
56	56	0.667
57	57	0.621
58	58	0.318
59	59	0.728
6	6	0.986
60	60	0.784
61	61	0.815
62	62	0.148
63	63	0.22
64	64	0.397
65	65	0.784
66	66	0.863
67	67	0.257
68	68	0.9
69	69	0.393
7	7	0.853
70	70	0.356
71	71	0.0453
72	72	0.744
73	73	0.0031
74	74	0.952
75	75	0.944
76	76	0.263
77	77	0.402
78	78	0.389
79	79	0.623
8	8	0.639
80	80	0.28
81	81	0.538
82	82	0.0909
83	83	5.40063e-4
84	84	0.101
85	85	0.51
86	86	0.551
87	87	0.0153
88	88	0.432
89	89	0.637
9	9	0.49
90	90	0.51
91	91	0.00198
92	92	0.732
93	93	0.887
94	94	0.151
95	95	0.0026
96	96	0.94
97	97	0.328
98	98	0.334
99	99	0.447

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11223

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011466 mouse adrenal gland - neonate N25 sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0002369 (adrenal gland)
0002100 (trunk)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0005177 (trunk region element)
0005172 (abdomen element)
0002530 (gland)
0006858 (adrenal/interrenal gland)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000101 (sample by species)
0000103 (mouse sample)
0000001 (sample)
0000004 (tissue sample)
0000303 (neonate sample - mouse)
0000309 (mouse neonate N25 sample)
0011466 (mouse adrenal gland - neonate N25 sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)
FF:0000294 (mouse embryonic day 11 sample)

@@ Line 1: / Line 1: @@
 {{f5samples
+|DRA_sample_Accession=CAGE@SAMD00005199
+|accession_numbers=CAGE;DRX008933;DRR009807;DRZ001232;DRZ002615;DRZ012582;DRZ013965
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002369,UBERON:0002100,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002368,UBERON:0005177,UBERON:0005172,UBERON:0002530,UBERON:0006858,UBERON:0010317,UBERON:0005173,UBERON:0002417,UBERON:0000949,UBERON:0000916
 |ancestors_in_cell_lineage_facet=
@@ Line 7: / Line 9: @@
 |created_by=
 |creation_date=
-|datafreeze_phase=1
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr2:38570011..38570034,-!p1@Nr5a1!2.29!195.41!Nr5a1;;chr11:96143666..96143725,+!p1@Hoxb8!1.63!47.88!Hoxb8;;chr4:133109285..133109308,+!p1@Nr0b2!1.60!39.08!Nr0b2;;chr15:101097270..101097290,+!p1@Nr4a1!1.58!365.56!Nr4a1;;chr11:96132637..96132652,+!p1@Hoxb9!1.46!27.90!Hoxb9;;chrX:83437105..83437121,+!p1@Nr0b1!1.40!24.13!Nr0b1;;chr7:108966820..108966835,+!p1@Phox2a!1.38!23.12!Phox2a;;chr8:59799772..59799789,+!p1@Hand2!1.37!62.96!Hand2;;chr11:96153767..96153822,+!p1@Hoxb6!1.32!30.54!Hoxb6;;chr5:120120667..120120685,+!p3@Tbx3!1.31!36.69!Tbx3;;chr15:102828658..102828678,+!p1@Hoxc6!1.26!17.22!Hoxc6;;chr11:96147952..96147967,+!p1@Hoxb7!1.22!19.35!Hoxb7;;chr10:88996295..88996335,-!p3@Nr1h4!1.18!16.84!Nr1h4;;chr10:88996336..88996380,-!p2@Nr1h4!1.17!17.22!Nr1h4;;chr19:37509324..37509337,+!p1@Hhex!1.12!86.71!Hhex;;chr11:96132767..96132796,+!p2@Hoxb9!1.12!12.32!Hoxb9;;chr5:120130377..120130432,+!p10@Tbx3!1.06!10.43!Tbx3;;chr7:52960555..52960662,+!p1@Dbp!1.05!87.21!Dbp;;chr18:11052485..11052508,+!p2@Gata6!1.04!28.53!Gata6;;chr10:22539932..22539956,-!p1@Tcf21!1.04!26.64!Tcf21;;chr6:115372058..115372085,+!p3@Pparg!1.02!9.55!Pparg;;chr15:102839948..102839975,+!p3@Hoxc6!0.96!8.17!Hoxc6;;chr2:167514456..167514473,+!p1@Cebpb!0.94!353.75!Cebpb;;chr5:135582751..135582788,+!p1@Mlxipl!0.94!31.92!Mlxipl;;chr11:100720767..100720797,+!p4@Stat5a!0.94!7.79!Stat5a;;chr11:57645506..57645523,-!p1@Hand1!0.94!7.67!Hand1;;chr2:38567715..38567730,-!p2@Nr5a1!0.93!7.54!Nr5a1;;chr5:120120834..120120845,+!p8@Tbx3!0.93!7.41!Tbx3;;chr11:98636531..98636559,-!p1@Nr1d1!0.92!43.10!Nr1d1;;chr9:24578720..24578735,-!p1@Tbx20!0.92!7.29!Tbx20;;chr6:83020355..83020371,-!p1@Tlx2!0.91!7.16!Tlx2;;chr6:52167513..52167549,-!p2@Hoxa7!0.89!9.80!Hoxa7;;chr2:115890953..115890974,-!p6@Meis2!0.88!10.18!Meis2;;chr11:5761889..5761969,+!p1@Aebp1!0.87!284.01!Aebp1;;chrX:45245679..45245702,-!p1@Smarca1!0.86!29.41!Smarca1;;chr15:35225845..35225867,+!p1@Osr2!0.85!16.09!Osr2;;chr5:120121446..120121461,+!p2@Tbx3!0.84!20.73!Tbx3;;chr6:115372099..115372121,+!p5@Pparg!0.84!5.91!Pparg;;chr11:96690797..96690813,-!p1@Nfe2l1!0.83!119.63!Nfe2l1;;chr7:116154364..116154444,+!p1@Tub!0.83!10.30!Tub;;chr11:96213288..96213332,+!p@chr11:96213288..96213332,+!0.83!10.18!Hoxb2;;chr11:98636508..98636524,-!p3@Nr1d1!0.83!7.29!Nr1d1;;chr11:96160426..96160443,+!p2@Hoxb6!0.83!5.78!Hoxb6;;chr11:96145450..96145517,+!p2@Hoxb7!0.81!8.42!Hoxb7;;chr2:34227446..34227511,-!p1@Pbx3!0.80!12.94!Pbx3;;chr17:14011485..14011507,+!p2@Mllt4!0.78!5.03!Mllt4;;chr10:80809447..80809515,-!p5@Hmg20b!0.77!6.03!Hmg20b;;chr15:102839976..102839989,+!p4@Hoxc6!0.77!4.90!Hoxc6;;chr5:120130275..120130296,+!p11@Tbx3!0.77!4.90!Tbx3;;chr18:11052456..11052477,+!p3@Gata6!0.76!15.83!Gata6;;chr4:48058047..48058062,+!p1@Nr4a3!0.76!7.67!Nr4a3;;chr16:43363190..43363242,+!p2@Zbtb20!0.75!15.46!Zbtb20;;chr13:30841099..30841116,+!p1@Irf4!0.75!7.54!Irf4;;chr10:77517570..77517581,+!p1@Dnmt3l!0.74!4.52!Dnmt3l;;chr11:96143962..96144035,+!p2@Hoxb8!0.73!4.40!Hoxb8;;chr11:5761979..5761992,+!p2@Aebp1!0.72!9.30!Aebp1;;chr5:67490474..67490494,-!p2@Phox2b!0.72!4.27!Phox2b;;chr2:44965856..44965896,-!p5@Zeb2!0.71!17.84!Zeb2;;chr1:52176315..52176343,+!p1@Stat1!0.69!63.84!Stat1;;chr2:74542918..74542971,+!p1@Hoxd8!0.69!6.28!Hoxd8;;chr15:102828642..102828653,+!p2@Hoxc6!0.69!3.90!Hoxc6;;chr12:25780945..25780961,-!p1@Id2!0.68!733.39!Id2;;chr15:102820946..102820961,+!p3@Hoxc8!0.68!3.77!Hoxc8;;chr10:88996274..88996286,-!p4@Nr1h4!0.68!3.77!Nr1h4;;chr7:35904304..35904320,+!p1@Cebpa!0.67!87.59!Cebpa;;chr14:18493386..18493464,+!p1@Thrb!0.67!15.96!Thrb;;chr2:9800207..9800234,-!p1@Gata3!0.67!12.57!Gata3;;chr17:87153440..87153451,+!p4@Epas1!0.67!8.29!Epas1;;chr5:120121262..120121282,+!p6@Tbx3!0.67!4.27!Tbx3;;chr15:102821007..102821021,+!p2@Hoxc8!0.67!3.64!Hoxc8;;chr7:148452314..148452329,-!p1@Irf7!0.66!28.65!Irf7;;chr5:125538737..125538781,-!p2@Ncor2!0.65!14.33!Ncor2;;chr11:70043257..70043263,-!p1@Bcl6b!0.65!6.41!Bcl6b;;chr5:32438395..32438406,+!p3@Fosl2!0.64!5.53!Fosl2;;chr15:102820964..102821006,+!p1@Hoxc8!0.64!3.39!Hoxc8;;chr1:169548377..169548430,+!p1@Rxrg!0.64!3.39!Rxrg;;chr11:96160360..96160397,+!p3@Hoxb6!0.64!3.39!Hoxb6;;chr11:96143843..96143868,+!p3@Hoxb8!0.64!3.39!Hoxb8;;chr4:48058129..48058179,+!p2@Nr4a3!0.63!6.79!Nr4a3;;chr6:88143711..88143717,+!p2@Gata2!0.63!5.65!Gata2;;chr11:60023912..60023930,-!p1@Srebf1!0.62!92.62!Srebf1;;chr2:91035197..91035237,-!p1@Nr1h3!0.62!7.29!Nr1h3;;chr16:43363152..43363186,+!p3@Zbtb20!0.61!7.92!Zbtb20;;chr11:98636400..98636418,-!p4@Nr1d1!0.60!4.15!Nr1d1;;chr11:96160403..96160416,+!p4@Hoxb6!0.60!3.02!Hoxb6;;chr15:76287876..76287894,+!p1@Scx!0.59!19.10!Scx;;chr14:76904313..76904328,+!p1@Tsc22d1!0.58!672.06!Tsc22d1;;chr5:120121020..120121049,+!p1@Tbx3!0.58!20.86!Tbx3;;chr2:160698288..160698358,-!p3@Zhx3!0.58!10.05!Zhx3;;chr15:102865088..102865107,+!p1@Hoxc4!0.58!4.02!Hoxc4;;chr2:74543397..74543435,+!p2@Hoxd8!0.58!2.76!Hoxd8;;chr14:19071466..19071550,-!p1@Nr1d2!0.57!22.49!Nr1d2;;chr11:96213264..96213282,+!p@chr11:96213264..96213282,+!0.57!3.64!Hoxb2;;chr7:52960700..52960719,+!p2@Dbp!0.57!3.52!Dbp;;chr17:87153240..87153254,+!p1@Epas1!0.56!63.84!Epas1;;chr9:69137716..69137744,+!p1@Rora!0.56!20.11!Rora;;chr18:11052516..11052525,+!p5@Gata6!0.56!2.64!Gata6;;chr10:5636354..5636373,-!p2@Esr1!0.56!2.64!Esr1;;chr1:191994550..191994623,-!p1@Prox1!0.55!21.61!Prox1;;chr4:48058016..48058032,+!p3@Nr4a3!0.55!4.90!Nr4a3;;chr16:23988711..23988727,-!p1@Bcl6!0.54!36.95!Bcl6;;chr1:52176406..52176433,+!p2@Stat1!0.54!7.16!Stat1;;chr14:17407878..17407926,-!p1@Rarb!0.54!6.41!Rarb;;chr7:77511403..77511450,-!p3@Nr2f2!0.54!6.16!Nr2f2;;chr11:52096804..52096896,-!p1@Tcf7!0.53!24.38!Tcf7;;chr12:34642682..34642753,+!p2@Twist1!0.53!7.67!Twist1;;chr11:100720806..100720820,+!p6@Stat5a!0.53!2.39!Stat5a;;chr5:120120708..120120713,+!p12@Tbx3!0.53!2.39!Tbx3;;chr5:67490391..67490404,-!p3@Phox2b!0.53!2.39!Phox2b;;chr8:109817400..109817417,+!p1@Nfat5!0.52!63.84!Nfat5;;chr14:67853425..67853454,+!p1@Ebf2!0.52!3.64!Ebf2;;chr11:96180045..96180059,+!p1@Hoxb4!0.52!3.52!Hoxb4;;chr12:39506873..39506913,+!p1@Etv1!0.51!29.66!Etv1;;chr4:43575544..43575565,+!p2@Creb3!0.51!16.71!Creb3;;chr9:69137672..69137702,+!p2@Rora!0.51!11.94!Rora;;chr1:52176378..52176401,+!p3@Stat1!0.51!8.17!Stat1;;chr17:87153462..87153473,+!p3@Epas1!0.50!10.18!Epas1;;chr9:96653072..96653154,-!p1@Zbtb38!0.50!7.16!Zbtb38;;chr13:64253718..64253763,-!p2@Zfp367!0.50!6.79!Zfp367;;chr10:30375579..30375616,-!p3@Ncoa7!0.50!6.16!Ncoa7;;chr2:146047829..146047847,+!p1@Insm1!0.50!4.52!Insm1;;chr5:120121169..120121171,+!p4@Tbx3!0.50!4.52!Tbx3;;chr11:52096750..52096772,-!p4@Tcf7!0.50!3.77!Tcf7;;chr2:151969288..151969294,+!p1@Tcf15!0.50!3.77!Tcf15;;chr15:85566184..85566238,+!p1@Ppara!0.50!3.64!Ppara;;chr2:74549968..74549996,+!p1@Hoxd3!0.50!2.89!Hoxd3;;chr9:96096707..96096772,+!p1@Tfdp2!0.49!41.60!Tfdp2;;chr6:52154386..52154407,-!p2@Hoxa5!0.48!2.76!Hoxa5;;chr10:5636374..5636421,-!p1@Esr1!0.48!2.76!Esr1;;chr15:102865131..102865151,+!p2@Hoxc4!0.48!2.39!Hoxc4;;chr15:102839912..102839938,+!p5@Hoxc6!0.48!2.01!Hoxc6;;chr7:52960663..52960677,+!p6@Dbp!0.48!2.01!Dbp;;chr1:19202352..19202354,+!p2@Tfap2b!0.48!2.01!Tfap2b;;chr11:96143728..96143745,+!p4@Hoxb8!0.48!2.01!Hoxb8;;chr2:74549945..74549965,+!p4@Hoxd3!0.48!2.01!Hoxd3;;chr2:74549915..74549930,+!p6@Hoxd3!0.48!2.01!Hoxd3;;chr11:98636575..98636607,-!p2@Nr1d1!0.47!9.30!Nr1d1;;chr8:111227518..111227550,+!p@chr8:111227518..111227550,+!0.47!4.02!Zfhx3;;chr10:80555320..80555378,-!p1@Creb3l3!0.47!2.39!Creb3l3;;chr17:87153028..87153049,+!p2@Epas1!0.46!53.79!Epas1;;chr7:20408047..20408125,-!p1@Bcl3!0.46!29.41!Bcl3;;chr3:89197057..89197114,-!p1@Zbtb7b!0.46!8.17!Zbtb7b;;chr13:99124189..99124205,+!p1@Foxd1!0.46!3.27!Foxd1;;chr14:67853457..67853482,+!p2@Ebf2!0.46!3.02!Ebf2;;chr4:48058102..48058110,+!p5@Nr4a3!0.46!2.26!Nr4a3;;chr15:35225873..35225889,+!p2@Osr2!0.46!1.88!Osr2;;chr11:96685444..96685473,-!p5@Nfe2l1!0.46!1.88!Nfe2l1;;chrX:95345005..95345053,+!p1@Ar!0.46!1.88!Ar;;chr18:11052642..11052659,+!p1@Gata6!0.45!12.44!Gata6;;chr9:48644037..48644067,-!p2@Zbtb16!0.45!5.78!Zbtb16;;chr2:148506935..148506954,+!p2@Gzf1!0.45!4.40!Gzf1;;chr9:68501522..68501538,+!p4@Rora!0.45!4.15!Rora;;chr12:39507404..39507441,+!p4@Etv1!0.45!2.89!Etv1;;chr8:94325321..94325366,-!p1@Irx3!0.44!5.40!Irx3;;chr19:25746898..25746910,+!p1@Dmrt2!0.44!3.02!Dmrt2;;chr2:133377954..133377973,+!p1@Bmp2!0.43!7.16!Bmp2;;chr2:173044380..173044432,-!p1@Zbp1!0.43!5.15!Zbp1;;chr2:56967334..56967366,-!p1@Nr4a2!0.43!4.27!Nr4a2;;chr13:31898637..31898653,+!p2@Foxc1!0.43!3.64!Foxc1;;chr5:122499831..122499891,-!p1@Cux2!0.43!3.02!Cux2;;chr18:3281725..3281740,-!p3@Crem!0.43!2.39!Crem;;chr18:36441119..36441158,+!p2@Pura!0.42!5.15!Pura;;chr16:43619057..43619078,+!p8@Zbtb20!0.42!4.27!Zbtb20;;chr11:96160451..96160462,+!p5@Hoxb6!0.42!1.63!Hoxb6;;chr10:88969376..88969395,-!p1@Nr1h4!0.42!1.63!Nr1h4;;chr2:74543202..74543213,+!p3@Hoxd8!0.42!1.63!Hoxd8;;chr2:74536026..74536039,+!p1@Hoxd9!0.42!1.63!Hoxd9;;chrX:83437070..83437078,+!p2@Nr0b1!0.42!1.63!Nr0b1;;chr5:67490284..67490302,-!p1@Phox2b!0.42!1.63!Phox2b;;chr6:83299445..83299490,+!p1@Bola3!0.41!97.27!Bola3;;chr17:71199121..71199165,-!p2@Tgif1!0.41!16.21!Tgif1;;chr9:96619823..96619898,-!p2@Zbtb38!0.41!9.68!Zbtb38;;chr18:75979866..75979890,+!p3@Zbtb7c!0.41!4.15!Zbtb7c;;chr10:80889867..80889924,-!p1@Nfic!0.40!64.09!Nfic;;chr8:87502608..87502623,-!p1@Junb!0.40!36.57!Junb;;chr2:115891534..115891589,-!p1@Meis2!0.40!31.92!Meis2;;chr19:5637475..5637486,+!p6@Rela!0.40!5.03!Rela;;chr2:115891381..115891392,-!p5@Meis2!0.40!3.77!Meis2;;chr11:85646427..85646451,+!p4@Tbx2!0.40!3.27!Tbx2;;chr11:96145362..96145389,+!p4@Hoxb7!0.40!1.51!Hoxb7;;chr6:48395426..48395504,-!p2@Zfp467!0.39!19.98!Zfp467;;chr18:3281034..3281104,-!p1@Crem!0.39!15.33!Crem;;chr16:3847206..3847307,+!p1@Zfp174!0.39!10.18!Zfp174;;chr4:54957910..54957954,+!p2@Zfp462!0.39!6.03!Zfp462;;chr5:122500142..122500167,-!p2@Cux2!0.39!4.02!Cux2;;chr4:149943593..149943605,+!p5@Rere!0.39!3.27!Rere;;chr2:115890469..115890485,-!p7@Meis2!0.39!2.76!Meis2;;chr2:34227273..34227292,-!p4@Pbx3!0.39!1.63!Pbx3;;chr6:90412582..90412601,+!p1@Klf15!0.38!9.55!Klf15;;chr19:23215469..23215494,+!p2@Klf9!0.38!2.64!Klf9;;chr11:98636373..98636387,-!p5@Nr1d1!0.38!1.76!Nr1d1;;chr11:52096732..52096741,-!p6@Tcf7!0.38!1.38!Tcf7;;chr11:96160068..96160084,+!p6@Hoxb6!0.38!1.38!Hoxb6;;chr2:115890864..115890869,-!p14@Meis2!0.38!1.38!Meis2;;chr2:74542974..74542986,+!p5@Hoxd8!0.38!1.38!Hoxd8;;chr2:181406327..181406350,-!p1@Sox18!0.37!66.73!Sox18;;chr1:170362273..170362317,-!p1@Pbx1!0.37!59.94!Pbx1;;chr6:88148650..88148669,+!p1@Gata2!0.37!17.22!Gata2;;chr9:96620228..96620308,-!p3@Zbtb38!0.37!9.30!Zbtb38;;chr14:19071567..19071612,-!p2@Nr1d2!0.37!7.54!Nr1d2;;chr18:11052606..11052633,+!p4@Gata6!0.37!4.65!Gata6;;chr11:18918820..18918831,-!p4@Meis1!0.37!3.27!Meis1;;chr19:23215554..23215567,+!p5@Klf9!0.37!2.14!Klf9;;chr2:91035254..91035271,-!p3@Nr1h3!0.37!1.88!Nr1h3;;chr19:5637489..5637500,+!p5@Rela!0.36!4.52!Rela;;chr4:149943326..149943351,+!p4@Rere!0.36!3.27!Rere;;chr6:52163319..52163342,-!p1@Hoxa3!0.36!2.26!Hoxa3;;chr11:106134241..106134320,-!p2@Smarcd2!0.35!22.75!Smarcd2;;chr3:94176733..94176794,+!p1@Rorc!0.35!15.33!Rorc;;chrX:7339938..7339963,+!p1@Tfe3!0.35!9.68!Tfe3;;chr2:152758901..152758925,-!p1@Foxs1!0.35!8.29!Foxs1;;chr5:120120409..120120416,+!p17@Tbx3!0.35!1.26!Tbx3;;chr2:74550015..74550057,+!p2@Hoxd3!0.35!1.26!Hoxd3;;chr11:100711801..100711910,-!p1@Stat5b!0.34!26.77!Stat5b;;chr11:95528303..95528319,+!p1@1700071K01Rik,p1@Phb!0.34!26.39!Phb;;chr11:72990702..72990737,+!p1@LOC100047518,p1@Tax1bp3!0.34!18.85!Tax1bp3;;chr7:77511234..77511302,-!p2@Nr2f2!0.34!12.69!Nr2f2;;chr14:22807107..22807119,-!p2@Zfp503!0.34!8.04!Zfp503;;chr6:134780234..134780288,+!p1@Crebl2!0.34!5.65!Crebl2;;chr3:54559496..54559511,+!p1@Smad9!0.34!3.64!Smad9;;chr6:72849280..72849297,-!p6@Kcmf1!0.34!3.14!Kcmf1;;chr12:39507680..39507715,+!p2@Etv1!0.34!3.14!Etv1;;chr3:54559463..54559493,+!p3@Smad9!0.34!2.89!Smad9;;chr5:120120981..120120992,+!p5@Tbx3!0.34!1.88!Tbx3;;chr19:23215509..23215523,+!p4@Klf9!0.34!1.76!Klf9;;chr4:97444471..97444514,+!p1@Nfia!0.33!50.89!Nfia;;chr1:93309740..93309811,-!p1@Hes6!0.33!38.20!Hes6;;chr16:42907676..42907797,+!p1@Zbtb20!0.33!24.38!Zbtb20;;chr14:56223010..56223067,+!p1@Irf9!0.33!14.70!Irf9;;chr14:76904356..76904367,+!p3@Tsc22d1!0.33!13.57!Tsc22d1;;chr2:181194069..181194144,-!p1@Zbtb46!0.33!10.30!Zbtb46;;chr2:115891427..115891441,-!p4@Meis2!0.33!3.39!Meis2;;chr6:90412608..90412630,+!p2@Klf15!0.33!3.27!Klf15;;chr2:160698668..160698679,-!p4@Zhx3!0.33!2.76!Zhx3;;chr8:111227493..111227517,+!p@chr8:111227493..111227517,+!0.33!2.64!Zfhx3;;chr9:96619968..96619983,-!p6@Zbtb38!0.33!2.51!Zbtb38;;chr1:87546583..87546595,+!p1@Sp100!0.33!2.01!Sp100;;chr8:94325486..94325510,-!p4@Irx3!0.33!1.76!Irx3;;chr11:96213434..96213452,+!p@chr11:96213434..96213452,+!0.33!1.76!Hoxb2;;chr11:96145393..96145407,+!p3@Hoxb7!0.33!1.13!Hoxb7;;chr11:96132523..96132538,+!p3@Hoxb9!0.33!1.13!Hoxb9;;chr11:96164821..96164865,+!p1@Hoxb5!0.33!1.13!Hoxb5;;chr17:14011545..14011564,+!p6@Mllt4!0.33!1.13!Mllt4;;chr9:21992581..21992593,+!p1@Zfp872!0.33!1.13!Zfp872;;chr6:52161666..52161711,-!p1@Hoxa6!0.33!1.13!Hoxa6;;chr11:100948597..100948637,+!p1@Mlx!0.32!44.74!Mlx;;chr2:160698721..160698745,-!p1@Zhx3!0.32!26.52!Zhx3;;chr10:80893549..80893590,-!p2@Nfic!0.32!20.61!Nfic;;chr8:28087578..28087599,+!p2@Zfp703!0.32!17.59!Zfp703;;chr19:46380172..46380231,+!p2@Nfkb2!0.32!12.32!Nfkb2;;chr13:56804865..56804898,+!p3@Smad5!0.32!4.27!Smad5;;chr2:44965788..44965815,-!p11@Zeb2!0.32!2.76!Zeb2;;chr6:39068163..39068176,-!p2@Parp12!0.32!2.76!Parp12;;chr6:145813964..145813994,-!p3@Bhlhe41!0.32!1.63!Bhlhe41;;chr19:23215673..23215753,+!p1@Klf9!0.31!26.64!Klf9;;chr1:4483679..4483695,-!p1@Sox17!0.31!7.92!Sox17;;chr2:25562263..25562314,+!p2@Bmyc!0.31!6.53!Bmyc;;chr11:69579401..69579427,+!p2@Zbtb4!0.31!6.53!Zbtb4;;chr14:52634536..52634572,-!p4@Zfp219!0.31!4.78!Zfp219;;chr13:31898729..31898761,+!p1@Foxc1!0.31!3.77!Foxc1;;chr16:43619101..43619151,+!p6@Zbtb20!0.31!3.77!Zbtb20;;chr19:23215430..23215441,+!p7@Klf9!0.31!1.51!Klf9;;chr14:18493480..18493494,+!p2@Thrb!0.31!1.26!Thrb;;chr1:170362242..170362256,-!p3@Pbx1!0.30!12.32!Pbx1;;chr18:84255841..84255883,-!p1@Tshz1!0.30!12.06!Tshz1;;chr17:84105510..84105540,+!p2@Mta3!0.30!8.92!Mta3;;chr3:89197551..89197606,-!p2@Zbtb7b!0.30!5.53!Zbtb7b;;chrX:45245644..45245666,-!p2@Smarca1!0.30!5.03!Smarca1;;chr2:115891454..115891471,-!p3@Meis2!0.30!4.78!Meis2;;chr16:43363968..43364001,+!p7@Zbtb20!0.30!2.51!Zbtb20;;chr7:52963269..52963305,+!p4@Dbp!0.30!1.76!Dbp;;chr7:52960888..52960902,+!p7@Dbp!0.30!1.01!Dbp;;chr11:96144050..96144065,+!p5@Hoxb8!0.30!1.01!Hoxb8;;chr10:129717274..129717298,-!p1@Neurod4!0.30!1.01!Neurod4;;chr11:57645586..57645597,-!p2@Hand1!0.30!1.01!Hand1;;chr11:96160119..96160135,+!p7@Hoxb6!0.30!1.01!Hoxb6;;chr19:37511111..37511115,+!p2@Hhex!0.30!1.01!Hhex;;chr15:102820912..102820923,+!p5@Hoxc8!0.30!1.01!Hoxc8;;chr8:28087609..28087634,+!p1@Zfp703!0.29!40.09!Zfp703;;chr2:75542592..75542609,-!p2@Nfe2l2!0.29!29.53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ed3;;chr7:120351014..120351109,+!p1@Arntl!0.20!19.23!Arntl;;chr2:32218712..32218782,+!p2@Ciz1!0.20!13.82!Ciz1;;chr10:127707602..127707633,+!p1@Stat2!0.20!12.06!Stat2;;chr5:92391901..92391936,+!p1@Thap6!0.20!6.28!Thap6;;chr6:29476690..29476724,+!p1@Irf5!0.20!5.91!Irf5;;chr18:84255771..84255795,-!p3@Tshz1!0.20!3.52!Tshz1;;chr1:170362322..170362333,-!p8@Pbx1!0.20!3.02!Pbx1;;chr8:111227641..111227672,+!p@chr8:111227641..111227672,+!0.20!3.02!Zfhx3;;chr3:135354903..135354945,-!p7@Nfkb1!0.20!2.51!Nfkb1;;chr6:39068181..39068206,-!p3@Parp12!0.20!2.14!Parp12;;chr15:102076652..102076679,-!p4@Rarg!0.20!1.76!Rarg;;chr11:102178005..102178022,-!p8@Ubtf!0.20!1.51!Ubtf;;chr10:127080091..127080100,+!p4@Stat6!0.20!1.26!Stat6;;chr14:67853632..67853674,+!p3@Ebf2!0.20!0.88!Ebf2;;chr9:48644013..48644027,-!p5@Zbtb16!0.20!0.88!Zbtb16;;chr6:115310968..115310980,+!p8@Pparg!0.20!0.75!Pparg;;chr5:34530319..34530398,-!p1@Mxd4!0.19!68.49!Mxd4;;chr13:55206651..55206701,+!p1@Zfp346!0.19!24.88!Zfp346;;chr11:44431687..44431706,+!p2@Ebf1!0.19!5.78!Ebf1;;chr1:170362335..170362356,-!p4@Pbx1!0.19!5.65!Pbx1;;chr12:110031310..110031342,+!p4@Yy1!0.19!4.90!Yy1;;chr11:74981654..74981658,-!p1@Hic1!0.19!4.78!Hic1;;chr19:5424822..5424845,-!p3@Drap1!0.19!4.78!Drap1;;chr13:67914714..67914768,+!p1@Zfp273!0.19!3.90!Zfp273;;chr11:85646263..85646278,+!p2@Tbx2!0.19!2.76!Tbx2;;chr10:26093876..26093894,-!p2@L3mbtl3!0.19!2.51!L3mbtl3;;chr2:181327403..181327432,-!p3@Znf512b!0.19!1.88!Znf512b;;chr6:115310872..115310899,+!p2@Pparg!0.19!1.63!Pparg;;chr18:69752912..69752928,+!p9@Tcf4!0.19!1.26!Tcf4;;chr1:4486505..4486527,-!p5@Sox17!0.19!1.01!Sox17;;chr10:88145766..88145770,-!p1@Spic!0.19!1.01!Spic;;chr6:52176164..52176195,-!p1@Hoxa9!0.19!0.88!Hoxa9;;chr2:17976799..17976829,+!p5@Mllt10!0.19!0.88!Mllt10;;chr14:32973087..32973175,+!p1@Gm6768,p1@Ncoa4!0.18!92.62!Ncoa4;;chr1:182499044..182499091,+!p1@Parp1!0.18!44.23!Parp1;;chr12:110031495..110031585,+!p1@Yy1!0.18!35.06!Yy1;;chr10:76424613..76424689,-!p1@Pcbp3!0.18!28.27!Pcbp3;;chr8:73905806..73905876,-!p1@Nr2f6!0.18!28.15!Nr2f6;;chr4:97444297..97444323,+!p2@Nfia!0.18!20.36!Nfia;;chr4:97444446..97444470,+!p3@Nfia!0.18!12.32!Nfia;;chr2:160698681..160698708,-!p2@Zhx3!0.18!10.30!Zhx3;;chrX:131543731..131543764,-!p1@Zmat1!0.18!9.30!Zmat1;;chr2:169956656..169956684,-!p1@Zfp217!0.18!8.42!Zfp217;;chr13:37918486..37918575,+!p2@Rreb1!0.18!7.79!Rreb1;;chr1:133904670..133904731,+!p2@Elk4!0.18!6.41!Elk4;;chr17:23701084..23701128,-!p1@Zfp213!0.18!5.91!Zfp213;;chr9:96096665..96096699,+!p4@Tfdp2!0.18!3.90!Tfdp2;;chr15:57526206..57526241,+!p2@Zhx2!0.18!3.77!Zhx2;;chr6:133985709..133985735,+!p5@Etv6!0.18!3.02!Etv6;;chr15:57907991..57908010,-!p3@Zhx1,p6@9130401M01Rik!0.18!2.89!Zhx1;;chrX:7339829..7339855,+!p3@Tfe3!0.18!2.89!Tfe3;;chr15:57526316..57526332,+!p4@Zhx2!0.18!2.39!Zhx2;;chr17:47278081..47278103,+!p1@Trerf1!0.18!2.39!Trerf1;;chr8:72520121..72520135,-!p12@Gatad2a!0.18!2.01!Gatad2a;;chr8:94881733..94881790,+!p1@Irx5!0.18!1.88!Irx5;;chr2:169458838..169458859,+!p4@Tshz2!0.18!1.88!Tshz2;;chr17:35031589..35031630,+!p2@Zbtb12!0.18!1.63!Zbtb12;;chr14:22807216..22807231,-!p3@Zfp503!0.18!1.51!Zfp503;;chr10:80600725..80600737,+!p9@Zbtb7a!0.18!1.26!Zbtb7a;;chr7:91558472..91558512,-!p2@Arnt2!0.18!1.13!Arnt2;;chr4:149610794..149610876,+!p2@LOC100045967,p2@LOC100503183,p3@Eno1,p3@Gm5506!0.18!1.01!Eno1;;chr2:9800094..9800108,-!p3@Gata3!0.18!0.50!Gata3;;chr2:74543103..74543135,+!p4@Hoxd8!0.18!0.50!Hoxd8;;chr8:73222425..73222444,+!p2@Jund!0.18!0.50!Jund;;chr9:96159133..96159145,+!p9@Tfdp2!0.18!0.50!Tfdp2;;chr11:100721732..100721742,+!p3@Stat5a!0.18!0.50!Stat5a;;chr10:5636336..5636347,-!p9@Esr1!0.18!0.50!Esr1;;chr11:100553754..100553787,-!p1@Zfp385c!0.18!0.50!Zfp385c;;chr10:5734677..5734702,-!p4@Esr1!0.18!0.50!Esr1;;chr11:98631631..98631667,-!p12@Nr1d1!0.18!0.50!Nr1d1;;chr12:39510260..39510271,+!p10@Etv1!0.18!0.50!Etv1;;chr13:83712735..83712761,+!p9@Mef2c!0.18!0.50!Mef2c;;chr14:17408022..17408043,-!p6@Rarb!0.18!0.50!Rarb;;chr12:30213247..30213333,+!p1@Myt1l!0.18!0.50!Myt1l;;chr13:53568191..53568219,-!p2@Msx2!0.18!0.50!Msx2;;chr1:19202185..19202187,+!p9@Tfap2b!0.18!0.50!Tfap2b;;chr2:181501988..181502026,+!p3@Myt1!0.18!0.50!Myt1;;chr2:17976830..17976848,+!p12@Mllt10!0.18!0.50!Mllt10;;chr1:19199221..19199234,+!p6@Tfap2b!0.18!0.50!Tfap2b;;chr1:19199236..19199258,+!p1@Tfap2b!0.18!0.50!Tfap2b;;chr2:115874845..115874865,-!p20@Meis2!0.18!0.50!Meis2;;chr1:87546572..87546579,+!p4@Sp100!0.18!0.50!Sp100;;chr16:43364258..43364270,+!p27@Zbtb20!0.18!0.50!Zbtb20;;chr17:44951431..44951445,-!p3@Runx2!0.18!0.50!Runx2;;chr5:67490333..67490342,-!p5@Phox2b!0.18!0.50!Phox2b;;chr8:73222830..73222844,+!p1@Jund!0.17!340.18!Jund;;chr3:87946250..87946405,+!p1@Mef2d!0.17!54.41!Mef2d;;chr5:32438831..32438878,+!p1@Fosl2!0.17!13.07!Fosl2;;chr15:57908011..57908070,-!p2@Zhx1,p3@9130401M01Rik!0.17!11.56!Zhx1;;chr19:26822880..26822964,+!p2@Smarca2!0.17!10.68!Smarca2;;chr6:72849946..72849979,-!p2@Kcmf1!0.17!7.04!Kcmf1;;chr6:65728988..65729056,+!p1@Prdm5!0.17!5.91!Prdm5;;chr4:119406389.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@@ Line 41: / Line 44: @@
 |is_a=EFO:0002091;;FF:0011466
 |is_obsolete=
+|library_id=CNhs11223
+|library_id_phase_based=2:CNhs11223
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/mouse#cage;sample;1377
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/mouse#cage;sample;1377
+|mm10bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520neonate%2520N25.CNhs11223.1377-27I3.mm10.nobarcode.bam
+|mm10ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/mm10_v2/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520neonate%2520N25.CNhs11223.1377-27I3.mm10.nobarcode.ctss.bed.gz
+|mm9bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520neonate%2520N25.CNhs11223.1377-27I3.mm9.nobarcode.bam
+|mm9ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520neonate%2520N25.CNhs11223.1377-27I3.mm9.ctss.bed.gz
+|mm9fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/mouse.tissue.hCAGE/adrenal%2520gland%252c%2520neonate%2520N25.CNhs11223.1377-27I3.mm9.nobarcode.rdna.fa.gz
 |name=adrenal gland, neonate N25
 |namespace=FANTOM5
@@ Line 46: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11223,LSID748,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|repeat_enrich_byfamily=-0.0691091157044105,0,0,0,0,0.0514097768499148,0.196197266811039,0,0,0,0,-0.0843392403965415,0,0,0,0,0,0,-0.0150307853225146,0,0,0,0,0.0423393513224395,0.0514097768499148,0,0,0,0,0,0,0,-0.0797602920069209,0,0,0,0,0,0.00112329583836462,0.0241208234676706,-0.0745914533006971,-0.144964053448914,-0.218458861160437,0,0,0,0,0,0,0,0,0,0,0.138933868974914,0.0514097768499148,0.0313674137084983,0,0,0,0,-0.00277083162030117,0,0.069466934487457,0,0,0,0.0405084143591609,-0.0989074444703061,0.711668326793235,0.0459637470165804,0.138933868974914,0,-0.00118526494868632,0,0.0514097768499148,0,0.018077439028508,0.085804879094677,-0.17535423516481,-0.0274218179899927,0,0,0,0,0,0,-0.0259275128575595,0.1277658235939,-0.0593569808972085,0,0,0,0,0
 |rna_box=27
 |rna_catalog_number=
@@ Line 61: / Line 76: @@
 |rna_weight_ug=
 |sample_age=
+|sample_category=developmental
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 81: / Line 97: @@
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 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_mouse;search_select_hide=table111:1377-27I3;search_select_hide=table117:1377-27I3
 }}

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FF:1377-27I3: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 19:05, 4 June 2020

CNhs11223

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0