Personal tools

FFCP PHASE1:Mm9::chr17:78907454..78907473,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74199
|EntrezGene=74199
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8VHI5
|UniProt=Q8VHI5
|association_with_transcript=-6bp_to_ENSMUST00000024880_5end
|association_with_transcript=-6bp_to_ENSMUST00000024880_5end
|cluster_id=chr17:78907454..78907473,+
|description=CAGE_peak_2_at_Vit_5end
|description=CAGE_peak_2_at_Vit_5end
|id=chr17:78907454..78907473,+
|id=chr17:78907454..78907473,+
|ontology_enrichment_celltype=CL:0000117!6.30e-10!23;CL:0000337!6.30e-10!23
|ontology_enrichment_celltype=CL:0000117!6.30e-10!23;CL:0000337!6.30e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.70e-15,23;CL:0000337,2.70e-15,23;CL:0000393,5.89e-11,39;CL:0000211,5.89e-11,39;CL:0000540,3.31e-09,33;CL:0000047,3.31e-09,33;CL:0000031,3.31e-09,33;CL:0000404,3.31e-09,33;CL:0002319,6.16e-09,43;CL:0000221,1.30e-08,44;CL:0000133,1.30e-08,44;CL:0002321,2.53e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.01e-12!63;UBERON:0002346!5.67e-12!71;UBERON:0003075!5.67e-12!71;UBERON:0007284!5.67e-12!71;UBERON:0004121!7.32e-12!102;UBERON:0000924!7.32e-12!102;UBERON:0006601!7.32e-12!102;UBERON:0003056!2.70e-10!49;UBERON:0001444!5.43e-09!11;UBERON:0000020!5.91e-09!12;UBERON:0001032!5.91e-09!12;UBERON:0004456!5.91e-09!12;UBERON:0001049!1.74e-08!52;UBERON:0005068!1.74e-08!52;UBERON:0006241!1.74e-08!52;UBERON:0007135!1.74e-08!52;UBERON:0000970!2.50e-08!9;UBERON:0000019!2.50e-08!9;UBERON:0000047!2.50e-08!9;UBERON:0004088!2.50e-08!9;UBERON:0002104!2.50e-08!9;UBERON:0001456!2.50e-08!9;UBERON:0003072!2.50e-08!9;UBERON:0003071!2.50e-08!9;UBERON:0004128!2.50e-08!9;UBERON:0007811!3.40e-07!86;UBERON:0005085!4.63e-07!13;UBERON:0002616!6.81e-07!49;UBERON:0002020!7.91e-07!34;UBERON:0000153!9.28e-07!94
|ontology_enrichment_uberon=UBERON:0000033!1.01e-12!63;UBERON:0002346!5.67e-12!71;UBERON:0003075!5.67e-12!71;UBERON:0007284!5.67e-12!71;UBERON:0004121!7.32e-12!102;UBERON:0000924!7.32e-12!102;UBERON:0006601!7.32e-12!102;UBERON:0003056!2.70e-10!49;UBERON:0001444!5.43e-09!11;UBERON:0000020!5.91e-09!12;UBERON:0001032!5.91e-09!12;UBERON:0004456!5.91e-09!12;UBERON:0001049!1.74e-08!52;UBERON:0005068!1.74e-08!52;UBERON:0006241!1.74e-08!52;UBERON:0007135!1.74e-08!52;UBERON:0000970!2.50e-08!9;UBERON:0000019!2.50e-08!9;UBERON:0000047!2.50e-08!9;UBERON:0004088!2.50e-08!9;UBERON:0002104!2.50e-08!9;UBERON:0001456!2.50e-08!9;UBERON:0003072!2.50e-08!9;UBERON:0003071!2.50e-08!9;UBERON:0004128!2.50e-08!9;UBERON:0007811!3.40e-07!86;UBERON:0005085!4.63e-07!13;UBERON:0002616!6.81e-07!49;UBERON:0002020!7.91e-07!34;UBERON:0000153!9.28e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.98e-17,64;UBERON:0003075,1.98e-17,64;UBERON:0007284,1.98e-17,64;UBERON:0010371,3.43e-15,73;UBERON:0000970,4.58e-15,9;UBERON:0000019,4.58e-15,9;UBERON:0000047,4.58e-15,9;UBERON:0010312,4.58e-15,9;UBERON:0004088,4.58e-15,9;UBERON:0002104,4.58e-15,9;UBERON:0001456,4.58e-15,9;UBERON:0003072,4.58e-15,9;UBERON:0004128,4.58e-15,9;UBERON:0003071,4.58e-15,9;UBERON:0001444,1.75e-14,11;UBERON:0004121,8.60e-14,95;UBERON:0000924,8.60e-14,95;UBERON:0006601,8.60e-14,95;UBERON:0003056,1.67e-13,49;UBERON:0000020,4.89e-13,12;UBERON:0001032,4.89e-13,12;UBERON:0004456,4.89e-13,12;UBERON:0000033,8.13e-12,13;UBERON:0010314,9.00e-12,92;UBERON:0002020,2.15e-10,34;UBERON:0000073,8.79e-10,54;UBERON:0005085,1.14e-09,13;UBERON:0001049,1.40e-09,52;UBERON:0005068,1.40e-09,52;UBERON:0006241,1.40e-09,52;UBERON:0007135,1.40e-09,52;UBERON:0002240,6.07e-08,6;UBERON:0005174,6.07e-08,6;UBERON:0001137,6.07e-08,6;UBERON:0001017,9.45e-08,73;UBERON:0000947,2.07e-07,4;UBERON:0001637,2.07e-07,4;UBERON:0004573,2.07e-07,4;UBERON:0003509,2.07e-07,4;UBERON:0004571,2.07e-07,4;UBERON:0010191,2.07e-07,4;UBERON:0004572,2.07e-07,4;UBERON:0001016,2.32e-07,75;UBERON:0001948,9.10e-07,5;UBERON:0002315,9.10e-07,5
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0.261199789138935,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0717454380462,7.70464677268311,7.70896359079063,0,2.39827672018491,1.75748946187577,0.777719596297134,1.1198913730029,0,0,0,0,0.771778308107841,0.573066879877513,0,1.41621522601718,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,1.8664130215526,1.35005938331691,2.3135745748652,1.42825492201902,1.32521124570968,2.20483438586917,2.68367318851062,0,1.10115880999389,1.27687338085188,0.614426133024974,1.45074916503213,1.37231465403614,2.6045668527838,0.837548997004143,1.12552522006336,1.22238598221448,1.17851434189467,1.42371680799103,2.05039390407831,0.227178579999552,0,0,0,0,0,0,0,0.702222100658759,0.340860645156116,0,0.70667914902068,0.985903938436763,10.2661181931454,5.09610479413291,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0.461230994512117,0.150722640552623,1.17588707135705,0.125666591329675,0.494389935468748,2.89198713839823,0,0.323533699894818,1.10420759230197,1.93950101254089,0,0.292780797011547,0.209446706813455,0,0,0,0,0.599162557619291,0.915001205637253,2.51308704225729,0,0.255715457330331,1.66230435647648,0.811206315338788,0.509196819251581,2.48813941220186,1.0108910337347,3.15662783829711,6.37590170517248,6.43725892413724,7.74267158163002,9.19299388797862,14.4917743192328,11.7864622662062,9.27647073141315,10.0894314588216,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,2.67516777330327,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.656669856316381,0.405344047729279,0.877199924551994,0.439100230582101,1.07365135008297,0.420579897128254,1.64647379806855,0,0,0,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,0.481651769963376,1.05490517932983,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.325773918707152,1.64970122972535,0,0,0,0,0.295301892880773,0.614870295887855,0.516856586336442,0,1.42598951353889,0.632073515871632,0,0,0,1.98067203434441,0.129358683782755,0,0,0.535106452806212,0.493647061806363,0.608929898229199,0,0,1.10264199027481,1.31909002353184,0.322928853391811,0.482503399425247,0.358117032009409,0.492422699235184,0,1.8542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0.165306911450672,0.26175594198403,0.648074866458964,0.621339313086926,0,0,0,0,0,0,0.234714477291508,1.17183946359555,0.314578033277133,0,1.15212002503146,0.316011120628178,0,0,0,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0,0,0,0,0,1.81384306892169,0,0,0,0.965947970160952,0.563047426353546,1.09890974560359,0.428736758158132,0.501572104035363,0,0,0,0.343706364687375,0,0.755393897389701,1.35004500046361,0,0,0,0.31136204275253,0.798049746802062,1.02440163452481,0.729320151204882,0.419226325255965,0.183843508450014,0.44449345560323,0.824140228955577,0,0.758091635291392,0.25347929989024,0.377252682772152,0.561849044819294,0.960377286073039,0.574354689556133,0,0.115884325944855,0.38581844092741,0,0.735994600671987,0,1.06485483695602,0.476872379894642,0.726732083161643,0.564656282491984,0.930760686808441,0.914639864363863,1.05227884575137,0.271608227691724,1.12228454331548,0.474540072496697,0.689531376628944,0,1.39443157067369,0.192906610981141,0.999242311751784,0.467863216890817,0.859484216193193,0.765153328275374,1.54413993383661,1.85494268496337
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0.0992909512008853,0.261199789138935,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0717454380462,7.70464677268311,7.70896359079063,0,2.39827672018491,1.75748946187577,0.777719596297134,1.1198913730029,0,0,0,0,0.771778308107841,0.573066879877513,0,1.41621522601718,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,1.8664130215526,1.35005938331691,2.3135745748652,1.42825492201902,1.32521124570968,2.20483438586917,2.68367318851062,0,1.10115880999389,1.27687338085188,0.614426133024974,1.45074916503213,1.37231465403614,2.6045668527838,0.837548997004143,1.12552522006336,1.22238598221448,1.17851434189467,1.42371680799103,2.05039390407831,0.227178579999552,0,0,0,0,0,0,0,0.702222100658759,0.340860645156116,0,0.70667914902068,0.985903938436763,10.2661181931454,5.09610479413291,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0.461230994512117,0.150722640552623,1.17588707135705,0.125666591329675,0.494389935468748,2.89198713839823,0,0.323533699894818,1.10420759230197,1.93950101254089,0,0.292780797011547,0.209446706813455,0,0,0,0,0.599162557619291,0.915001205637253,2.51308704225729,0,0.255715457330331,1.66230435647648,0.811206315338788,0.509196819251581,2.48813941220186,1.0108910337347,3.15662783829711,6.37590170517248,6.43725892413724,7.74267158163002,9.19299388797862,14.4917743192328,11.7864622662062,9.27647073141315,10.0894314588216,0,0,0.175951124163949,0.219195732427575,0,0.696504333044333,2.67516777330327,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.656669856316381,0.405344047729279,0.877199924551994,0.439100230582101,1.07365135008297,0.420579897128254,1.64647379806855,0,0,0,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,0.481651769963376,1.05490517932983,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.325773918707152,1.64970122972535,0,0,0,0,0.295301892880773,0.614870295887855,0.516856586336442,0,1.42598951353889,0.632073515871632,0,0,0,1.98067203434441,0.129358683782755,0,0,0.535106452806212,0.493647061806363,0.608929898229199,0,0,1.10264199027481,1.31909002353184,0.322928853391811,0.482503399425247,0.358117032009409,0.492422699235184,0,1.8542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0.165306911450672,0.26175594198403,0.648074866458964,0.621339313086926,0,0,0,0,0,0,0.234714477291508,1.17183946359555,0.314578033277133,0,1.15212002503146,0.316011120628178,0,0,0,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0,0,0,0,0,1.81384306892169,0,0,0,0.965947970160952,0.563047426353546,1.09890974560359,0.428736758158132,0.501572104035363,0,0,0,0.343706364687375,0,0.755393897389701,1.35004500046361,0,0,0,0.31136204275253,0.798049746802062,1.02440163452481,0.729320151204882,0.419226325255965,0.183843508450014,0.44449345560323,0.824140228955577,0,0.758091635291392,0.25347929989024,0.377252682772152,0.561849044819294,0.960377286073039,0.574354689556133,0,0.115884325944855,0.38581844092741,0,0.735994600671987,0,1.06485483695602,0.476872379894642,0.726732083161643,0.564656282491984,0.930760686808441,0.914639864363863,1.05227884575137,0.271608227691724,1.12228454331548,0.474540072496697,0.689531376628944,0,1.39443157067369,0.192906610981141,0.999242311751784,0.467863216890817,0.859484216193193,0.765153328275374,1.54413993383661,1.85494268496337
|short_description=p2@Vit
|short_description=p2@Vit
}}
}}

Latest revision as of 21:35, 26 September 2015

Short description:p2@Vit
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Vit_5end
Coexpression cluster:NA
Association with transcript: -6bp_to_ENSMUST00000024880_5end
EntrezGene:Vit
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Vit

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.70
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.71
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C66.38
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C97.74
eyeball, embryo E17.CNhs11023.1261-18D49.19
eyeball, neonate N00.CNhs11207.633-15C614.49
eyeball, neonate N01.CNhs11140.1532-43E711.79
eyeball, neonate N02.CNhs11205.1551-44G89.28
eyeball, neonate N16.CNhs11188.777-19A210.09
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.70e-1523
neuroblast (sensu Vertebrata)2.70e-1523
electrically responsive cell5.89e-1139
electrically active cell5.89e-1139
neuron3.31e-0933
neuronal stem cell3.31e-0933
neuroblast3.31e-0933
electrically signaling cell3.31e-0933
neural cell6.16e-0943
ectodermal cell1.30e-0844
neurectodermal cell1.30e-0844
embryonic cell2.53e-0770

Uber anatomy
Ontology termp-valuen
neurectoderm1.98e-1764
neural plate1.98e-1764
presumptive neural plate1.98e-1764
ecto-epithelium3.43e-1573
eye4.58e-159
camera-type eye4.58e-159
simple eye4.58e-159
immature eye4.58e-159
ocular region4.58e-159
visual system4.58e-159
face4.58e-159
optic cup4.58e-159
optic vesicle4.58e-159
eye primordium4.58e-159
subdivision of head1.75e-1411
ectoderm-derived structure8.60e-1495
ectoderm8.60e-1495
presumptive ectoderm8.60e-1495
pre-chordal neural plate1.67e-1349
sense organ4.89e-1312
sensory system4.89e-1312
entire sense organ system4.89e-1312
head8.13e-1213
structure with developmental contribution from neural crest9.00e-1292
gray matter2.15e-1034
regional part of nervous system8.79e-1054
ectodermal placode1.14e-0913
neural tube1.40e-0952
neural rod1.40e-0952
future spinal cord1.40e-0952
neural keel1.40e-0952
spinal cord6.07e-086
dorsal region element6.07e-086
dorsum6.07e-086
central nervous system9.45e-0873
aorta2.07e-074
artery2.07e-074
systemic artery2.07e-074
arterial blood vessel2.07e-074
systemic arterial system2.07e-074
aortic system2.07e-074
arterial system2.07e-074
nervous system2.32e-0775
regional part of spinal cord9.10e-075
gray matter of spinal cord9.10e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:78907454..78907473,%2B&oldid=4275580"