FFCP PHASE1:Mm9::chrX:136330909..136330938,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=457 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:136330909..136330938,- | |||
|description=CAGE_peak_at_chrX:136330909..136330938,- | |description=CAGE_peak_at_chrX:136330909..136330938,- | ||
|id=chrX:136330909..136330938,- | |id=chrX:136330909..136330938,- | ||
|ontology_enrichment_celltype=CL:0000473!1.26e-12!3;CL:0000627!1.26e-12!3;CL:0000682!1.26e-12!3;CL:0000239!6.13e-11!6;CL:0000677!6.13e-11!6;CL:0000212!6.13e-11!6;CL:0000584!6.13e-11!6;CL:0000075!2.19e-09!7;CL:0000066!3.67e-09!25;CL:0002563!2.63e-07!9;CL:0002251!2.63e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.81e-19,6;CL:0000677,2.81e-19,6;CL:0000584,2.81e-19,6;CL:0000066,4.24e-18,25;CL:0000682,1.59e-17,3;CL:0000075,1.22e-16,7;CL:0000213,8.69e-14,1;CL:0002078,8.69e-14,1;CL:0000115,8.69e-14,1;CL:0002262,8.69e-14,1;CL:1000398,8.69e-14,1;CL:0002563,4.09e-13,9;CL:0002251,4.09e-13,9;CL:0000223,1.97e-10,20;CL:0002076,3.82e-08,15;CL:0000473,4.45e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.31e-12!15;UBERON:0001962!1.50e-08!2;UBERON:0001961!1.50e-08!2;UBERON:0001744!1.50e-08!2;UBERON:0001242!1.32e-07!13;UBERON:0000060!1.32e-07!13;UBERON:0001262!1.32e-07!13;UBERON:0004786!1.32e-07!13;UBERON:0003350!2.63e-07!9;UBERON:0004808!2.63e-07!9;UBERON:0001277!2.63e-07!9;UBERON:0004923!2.74e-07!24;UBERON:0000064!9.44e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,6.92e-16,13;UBERON:0001262,6.92e-16,13;UBERON:0004786,6.92e-16,13;UBERON:0000344,7.67e-14,15;UBERON:0002394,8.69e-14,1;UBERON:0001281,8.69e-14,1;UBERON:0000353,8.69e-14,1;UBERON:0003497,8.69e-14,1;UBERON:0003909,8.69e-14,1;UBERON:0003928,8.69e-14,1;UBERON:0003835,8.69e-14,1;UBERON:0003513,8.69e-14,1;UBERON:0001280,8.69e-14,1;UBERON:0004647,8.69e-14,1;UBERON:0002294,8.69e-14,1;UBERON:0001173,8.69e-14,1;UBERON:0004912,8.69e-14,1;UBERON:0005171,8.69e-14,1;UBERON:0003350,4.09e-13,9;UBERON:0004808,4.09e-13,9;UBERON:0001277,4.09e-13,9;UBERON:0000485,7.32e-11,11;UBERON:0004923,7.89e-09,24;UBERON:0000160,6.33e-07,31 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,0,0,1.17515490338323,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.22940928106717,0.57423196411502,1.29228598847722,2.80112602491656,0,0,11.3082560434205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0.15241361331,0.100826185136841,0.292373642219257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0.697950815278722,1.36499771816861,0,0,1.17515490338323,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.22940928106717,0.57423196411502,1.29228598847722,2.80112602491656,0,0,11.3082560434205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0.15241361331,0.100826185136841,0.292373642219257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chrX:136330909..136330938,- | |short_description=p@chrX:136330909..136330938,- | ||
}} | }} |
Latest revision as of 01:01, 6 August 2015
Short description: | p@chrX:136330909..136330938, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:136330909..136330938, - |
Coexpression cluster: | MCL_coexpression_mm9:457 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.81e-19 | 6 |
gut absorptive cell | 2.81e-19 | 6 |
enterocyte | 2.81e-19 | 6 |
epithelial cell | 4.24e-18 | 25 |
M cell of gut | 1.59e-17 | 3 |
columnar/cuboidal epithelial cell | 1.22e-16 | 7 |
lining cell | 8.69e-14 | 1 |
meso-epithelial cell | 8.69e-14 | 1 |
endothelial cell | 8.69e-14 | 1 |
endothelial cell of sinusoid | 8.69e-14 | 1 |
endothelial cell of hepatic sinusoid | 8.69e-14 | 1 |
intestinal epithelial cell | 4.09e-13 | 9 |
epithelial cell of alimentary canal | 4.09e-13 | 9 |
endodermal cell | 1.97e-10 | 20 |
endo-epithelial cell | 3.82e-08 | 15 |
defensive cell | 4.45e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 6.92e-16 | 13 |
wall of intestine | 6.92e-16 | 13 |
gastrointestinal system mucosa | 6.92e-16 | 13 |
mucosa | 7.67e-14 | 15 |
bile duct | 8.69e-14 | 1 |
hepatic sinusoid | 8.69e-14 | 1 |
parenchyma | 8.69e-14 | 1 |
abdomen blood vessel | 8.69e-14 | 1 |
sinusoid | 8.69e-14 | 1 |
digestive system duct | 8.69e-14 | 1 |
abdominal segment blood vessel | 8.69e-14 | 1 |
trunk blood vessel | 8.69e-14 | 1 |
liver parenchyma | 8.69e-14 | 1 |
liver lobule | 8.69e-14 | 1 |
biliary system | 8.69e-14 | 1 |
biliary tree | 8.69e-14 | 1 |
biliary bud | 8.69e-14 | 1 |
hepatic duct | 8.69e-14 | 1 |
epithelium of mucosa | 4.09e-13 | 9 |
gastrointestinal system epithelium | 4.09e-13 | 9 |
intestinal epithelium | 4.09e-13 | 9 |
simple columnar epithelium | 7.32e-11 | 11 |
organ component layer | 7.89e-09 | 24 |
intestine | 6.33e-07 | 31 |